Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0241740 | XP_013463066.1 | 97.980 | 297 | 6 | 0 | 1 | 297 | 1 | 297 | 0.0 | 588 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0241740 | sp|Q8VWK4|TRB1_ARATH | 57.895 | 247 | 91 | 6 | 1 | 241 | 1 | 240 | 4.65e-87 | 265 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0241740 | A0A072VG04 | 97.980 | 297 | 6 | 0 | 1 | 297 | 1 | 297 | 0.0 | 588 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0241740 | TF | MYB-related |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa0241740 | -0.802294 | 6.005960e-49 | -8.615850e-47 |
| Msa0000590 | Msa0241740 | 0.848898 | 4.570082e-60 | -8.615850e-47 |
| Msa0008220 | Msa0241740 | 0.800853 | 1.185776e-48 | -8.615850e-47 |
| Msa0008840 | Msa0241740 | 0.828026 | 1.129713e-54 | -8.615850e-47 |
| Msa0017320 | Msa0241740 | 0.801892 | 7.265767e-49 | -8.615850e-47 |
| Msa0026660 | Msa0241740 | 0.820296 | 7.394496e-53 | -8.615850e-47 |
| Msa0036370 | Msa0241740 | 0.856757 | 2.592563e-62 | -8.615850e-47 |
| Msa0038870 | Msa0241740 | 0.807687 | 4.474922e-50 | -8.615850e-47 |
| Msa0043730 | Msa0241740 | 0.845800 | 3.240236e-59 | -8.615850e-47 |
| Msa0047250 | Msa0241740 | 0.800337 | 1.511085e-48 | -8.615850e-47 |
| Msa0055100 | Msa0241740 | 0.806284 | 8.863408e-50 | -8.615850e-47 |
| Msa0057370 | Msa0241740 | 0.800304 | 1.534459e-48 | -8.615850e-47 |
| Msa0057750 | Msa0241740 | 0.824108 | 9.648228e-54 | -8.615850e-47 |
| Msa0065010 | Msa0241740 | 0.802466 | 5.536633e-49 | -8.615850e-47 |
| Msa0065650 | Msa0241740 | 0.806051 | 9.923004e-50 | -8.615850e-47 |
| Msa0072170 | Msa0241740 | 0.853382 | 2.480356e-61 | -8.615850e-47 |
| Msa0084430 | Msa0241740 | 0.822755 | 1.998602e-53 | -8.615850e-47 |
| Msa0085720 | Msa0241740 | 0.839515 | 1.513575e-57 | -8.615850e-47 |
| Msa0090030 | Msa0241740 | 0.837103 | 6.331858e-57 | -8.615850e-47 |
| Msa0092440 | Msa0241740 | 0.813992 | 1.932753e-51 | -8.615850e-47 |
| Msa0101180 | Msa0241740 | 0.819452 | 1.153007e-52 | -8.615850e-47 |
| Msa0101880 | Msa0241740 | 0.801765 | 7.714781e-49 | -8.615850e-47 |
| Msa0103070 | Msa0241740 | 0.823359 | 1.445331e-53 | -8.615850e-47 |
| Msa0108870 | Msa0241740 | 0.815313 | 9.854479e-52 | -8.615850e-47 |
| Msa0118540 | Msa0241740 | 0.811944 | 5.433137e-51 | -8.615850e-47 |
| Msa0120540 | Msa0241740 | 0.851053 | 1.140090e-60 | -8.615850e-47 |
| Msa0130520 | Msa0241740 | 0.848922 | 4.500698e-60 | -8.615850e-47 |
| Msa0131450 | Msa0241740 | 0.800132 | 1.663646e-48 | -8.615850e-47 |
| Msa0140400 | Msa0241740 | 0.833431 | 5.355291e-56 | -8.615850e-47 |
| Msa0140510 | Msa0241740 | -0.816346 | 5.798485e-52 | -8.615850e-47 |
| Msa0140520 | Msa0241740 | -0.809259 | 2.067053e-50 | -8.615850e-47 |
| Msa0144620 | Msa0241740 | 0.802034 | 6.794049e-49 | -8.615850e-47 |
| Msa0145150 | Msa0241740 | 0.832206 | 1.078755e-55 | -8.615850e-47 |
| Msa0154920 | Msa0241740 | 0.802040 | 6.775212e-49 | -8.615850e-47 |
| Msa0161070 | Msa0241740 | -0.824381 | 8.323158e-54 | -8.615850e-47 |
| Msa0165900 | Msa0241740 | 0.811562 | 6.581041e-51 | -8.615850e-47 |
| Msa0173330 | Msa0241740 | 0.806692 | 7.270700e-50 | -8.615850e-47 |
| Msa0175050 | Msa0241740 | 0.822189 | 2.706205e-53 | -8.615850e-47 |
| Msa0176330 | Msa0241740 | 0.848020 | 7.995904e-60 | -8.615850e-47 |
| Msa0186310 | Msa0241740 | 0.807932 | 3.970508e-50 | -8.615850e-47 |
| Msa0187060 | Msa0241740 | 0.811255 | 7.670467e-51 | -8.615850e-47 |
| Msa0193600 | Msa0241740 | 0.805241 | 1.467727e-49 | -8.615850e-47 |
| Msa0194720 | Msa0241740 | 0.841476 | 4.643687e-58 | -8.615850e-47 |
| Msa0198940 | Msa0241740 | 0.942193 | 1.107184e-101 | -8.615850e-47 |
| Msa0208810 | Msa0241740 | 0.830735 | 2.483674e-55 | -8.615850e-47 |
| Msa0212750 | Msa0241740 | -0.859249 | 4.711990e-63 | -8.615850e-47 |
| Msa0220080 | Msa0241740 | 0.826646 | 2.420528e-54 | -8.615850e-47 |
| Msa0225210 | Msa0241740 | 0.805023 | 1.630930e-49 | -8.615850e-47 |
| Msa0229360 | Msa0241740 | 0.817673 | 2.918296e-52 | -8.615850e-47 |
| Msa0239940 | Msa0241740 | 0.819127 | 1.367266e-52 | -8.615850e-47 |
| Msa0241740 | Msa0250670 | 0.805632 | 1.215602e-49 | -8.615850e-47 |
| Msa0241740 | Msa0252240 | 0.814507 | 1.487133e-51 | -8.615850e-47 |
| Msa0241740 | Msa0265160 | 0.811992 | 5.304240e-51 | -8.615850e-47 |
| Msa0241740 | Msa0265230 | -0.809469 | 1.863071e-50 | -8.615850e-47 |
| Msa0241740 | Msa0266210 | 0.829424 | 5.188032e-55 | -8.615850e-47 |
| Msa0241740 | Msa0269520 | 0.819210 | 1.308976e-52 | -8.615850e-47 |
| Msa0241740 | Msa0271790 | 0.804430 | 2.168196e-49 | -8.615850e-47 |
| Msa0241740 | Msa0273650 | 0.802493 | 5.464994e-49 | -8.615850e-47 |
| Msa0241740 | Msa0279770 | 0.846678 | 1.867785e-59 | -8.615850e-47 |
| Msa0241740 | Msa0287670 | 0.836034 | 1.185399e-56 | -8.615850e-47 |
| Msa0241740 | Msa0288730 | 0.809289 | 2.036434e-50 | -8.615850e-47 |
| Msa0241740 | Msa0289400 | 0.828737 | 7.614407e-55 | -8.615850e-47 |
| Msa0241740 | Msa0299520 | 0.801471 | 8.866768e-49 | -8.615850e-47 |
| Msa0241740 | Msa0308200 | 0.816881 | 4.399162e-52 | -8.615850e-47 |
| Msa0241740 | Msa0308220 | 0.828302 | 9.695544e-55 | -8.615850e-47 |
| Msa0241740 | Msa0310430 | 0.818209 | 2.209046e-52 | -8.615850e-47 |
| Msa0241740 | Msa0319130 | 0.830468 | 2.887069e-55 | -8.615850e-47 |
| Msa0241740 | Msa0319330 | 0.804467 | 2.130516e-49 | -8.615850e-47 |
| Msa0241740 | Msa0320610 | 0.808546 | 2.936731e-50 | -8.615850e-47 |
| Msa0241740 | Msa0321170 | 0.803519 | 3.353297e-49 | -8.615850e-47 |
| Msa0241740 | Msa0363170 | 0.849240 | 3.672500e-60 | -8.615850e-47 |
| Msa0241740 | Msa0377530 | 0.840269 | 9.623956e-58 | -8.615850e-47 |
| Msa0241740 | Msa0384540 | 0.800559 | 1.361680e-48 | -8.615850e-47 |
| Msa0241740 | Msa0387880 | -0.803243 | 3.826461e-49 | -8.615850e-47 |
| Msa0241740 | Msa0387910 | 0.814149 | 1.784182e-51 | -8.615850e-47 |
| Msa0241740 | Msa0388030 | -0.820542 | 6.490526e-53 | -8.615850e-47 |
| Msa0241740 | Msa0403190 | 0.826684 | 2.370508e-54 | -8.615850e-47 |
| Msa0241740 | Msa0404700 | 0.858336 | 8.832445e-63 | -8.615850e-47 |
| Msa0241740 | Msa0417650 | 0.805983 | 1.025753e-49 | -8.615850e-47 |
| Msa0241740 | Msa0426810 | 0.842917 | 1.929457e-58 | -8.615850e-47 |
| Msa0241740 | Msa0431770 | 0.805603 | 1.232643e-49 | -8.615850e-47 |
| Msa0241740 | Msa0436190 | 0.829928 | 3.911788e-55 | -8.615850e-47 |
| Msa0241740 | Msa0439890 | 0.808030 | 3.783922e-50 | -8.615850e-47 |
| Msa0241740 | Msa0442310 | 0.803565 | 3.280892e-49 | -8.615850e-47 |
| Msa0241740 | Msa0449820 | 0.839963 | 1.156683e-57 | -8.615850e-47 |
| Msa0241740 | Msa0461590 | 0.803684 | 3.099174e-49 | -8.615850e-47 |
| Msa0241740 | Msa0462540 | 0.831590 | 1.531193e-55 | -8.615850e-47 |
| Msa0241740 | Msa0464900 | 0.815877 | 7.378707e-52 | -8.615850e-47 |
| Msa0241740 | Msa0465960 | 0.800011 | 1.760724e-48 | -8.615850e-47 |
| Msa0241740 | Msa0489610 | 0.819899 | 9.114590e-53 | -8.615850e-47 |
| Msa0241740 | Msa0493920 | 0.803459 | 3.451258e-49 | -8.615850e-47 |
| Msa0241740 | Msa0505060 | 0.823381 | 1.428209e-53 | -8.615850e-47 |
| Msa0241740 | Msa0517490 | 0.837996 | 3.736862e-57 | -8.615850e-47 |
| Msa0241740 | Msa0524600 | 0.837208 | 5.953875e-57 | -8.615850e-47 |
| Msa0241740 | Msa0527910 | 0.835060 | 2.090032e-56 | -8.615850e-47 |
| Msa0241740 | Msa0534080 | 0.818926 | 1.518747e-52 | -8.615850e-47 |
| Msa0241740 | Msa0534410 | 0.835738 | 1.408702e-56 | -8.615850e-47 |
| Msa0241740 | Msa0537530 | 0.809441 | 1.889234e-50 | -8.615850e-47 |
| Msa0241740 | Msa0537770 | 0.806074 | 9.812772e-50 | -8.615850e-47 |
| Msa0241740 | Msa0557950 | -0.812628 | 3.852683e-51 | -8.615850e-47 |
| Msa0241740 | Msa0567240 | 0.817828 | 2.692528e-52 | -8.615850e-47 |
| Msa0241740 | Msa0573040 | 0.800697 | 1.276080e-48 | -8.615850e-47 |
| Msa0241740 | Msa0578090 | 0.838748 | 2.392153e-57 | -8.615850e-47 |
| Msa0241740 | Msa0579370 | 0.816160 | 6.382547e-52 | -8.615850e-47 |
| Msa0241740 | Msa0582280 | 0.800829 | 1.199191e-48 | -8.615850e-47 |
| Msa0241740 | Msa0585620 | -0.815236 | 1.024966e-51 | -8.615850e-47 |
| Msa0241740 | Msa0585650 | -0.812097 | 5.033116e-51 | -8.615850e-47 |
| Msa0241740 | Msa0587190 | 0.812654 | 3.802687e-51 | -8.615850e-47 |
| Msa0241740 | Msa0590650 | 0.826526 | 2.585147e-54 | -8.615850e-47 |
| Msa0241740 | Msa0594200 | 0.807825 | 4.183399e-50 | -8.615850e-47 |
| Msa0241740 | Msa0597000 | 0.802935 | 4.430305e-49 | -8.615850e-47 |
| Msa0241740 | Msa0607510 | 0.808806 | 2.584820e-50 | -8.615850e-47 |
| Msa0241740 | Msa0609220 | 0.805545 | 1.267729e-49 | -8.615850e-47 |
| Msa0241740 | Msa0609970 | 0.836928 | 7.018687e-57 | -8.615850e-47 |
| Msa0241740 | Msa0614990 | 0.836994 | 6.749680e-57 | -8.615850e-47 |
| Msa0241740 | Msa0617260 | 0.837574 | 4.797998e-57 | -8.615850e-47 |
| Msa0241740 | Msa0617450 | 0.803634 | 3.174118e-49 | -8.615850e-47 |
| Msa0241740 | Msa0619180 | 0.808427 | 3.114582e-50 | -8.615850e-47 |
| Msa0241740 | Msa0619920 | 0.803432 | 3.496782e-49 | -8.615850e-47 |
| Msa0241740 | Msa0621240 | 0.811546 | 6.632054e-51 | -8.615850e-47 |
| Msa0241740 | Msa0621650 | 0.807124 | 5.890841e-50 | -8.615850e-47 |
| Msa0241740 | Msa0625790 | 0.830036 | 3.681014e-55 | -8.615850e-47 |
| Msa0241740 | Msa0626220 | 0.800365 | 1.491337e-48 | -8.615850e-47 |
| Msa0241740 | Msa0626680 | 0.802085 | 6.632861e-49 | -8.615850e-47 |
| Msa0241740 | Msa0626940 | 0.818051 | 2.397796e-52 | -8.615850e-47 |
| Msa0241740 | Msa0628290 | 0.814363 | 1.600391e-51 | -8.615850e-47 |
| Msa0241740 | Msa0630950 | 0.832669 | 8.285259e-56 | -8.615850e-47 |
| Msa0241740 | Msa0650620 | 0.826603 | 2.477844e-54 | -8.615850e-47 |
| Msa0241740 | Msa0651150 | 0.812991 | 3.208739e-51 | -8.615850e-47 |
| Msa0241740 | Msa0653320 | -0.826799 | 2.224218e-54 | -8.615850e-47 |
| Msa0241740 | Msa0659140 | 0.837411 | 5.279907e-57 | -8.615850e-47 |
| Msa0241740 | Msa0664760 | 0.809686 | 1.673717e-50 | -8.615850e-47 |
| Msa0241740 | Msa0669190 | 0.810788 | 9.684795e-51 | -8.615850e-47 |
| Msa0241740 | Msa0679550 | 0.827025 | 1.964502e-54 | -8.615850e-47 |
| Msa0241740 | Msa0687230 | 0.807241 | 5.563778e-50 | -8.615850e-47 |
| Msa0241740 | Msa0689420 | 0.824899 | 6.284198e-54 | -8.615850e-47 |
| Msa0241740 | Msa0693790 | 0.851203 | 1.034302e-60 | -8.615850e-47 |
| Msa0241740 | Msa0696420 | 0.826686 | 2.367229e-54 | -8.615850e-47 |
| Msa0241740 | Msa0700230 | 0.833014 | 6.802443e-56 | -8.615850e-47 |
| Msa0241740 | Msa0704800 | 0.806855 | 6.717330e-50 | -8.615850e-47 |
| Msa0241740 | Msa0705600 | 0.829780 | 4.249370e-55 | -8.615850e-47 |
| Msa0241740 | Msa0711490 | 0.801566 | 8.475120e-49 | -8.615850e-47 |
| Msa0241740 | Msa0713350 | 0.808624 | 2.826110e-50 | -8.615850e-47 |
| Msa0241740 | Msa0720370 | 0.818899 | 1.540447e-52 | -8.615850e-47 |
| Msa0241740 | Msa0735310 | 0.803258 | 3.798915e-49 | -8.615850e-47 |
| Msa0241740 | Msa0742510 | 0.804587 | 2.011022e-49 | -8.615850e-47 |
| Msa0241740 | Msa0743530 | 0.804755 | 1.854844e-49 | -8.615850e-47 |
| Msa0241740 | Msa0751210 | 0.802191 | 6.307231e-49 | -8.615850e-47 |
| Msa0241740 | Msa0761890 | 0.846500 | 2.088465e-59 | -8.615850e-47 |
| Msa0241740 | Msa0794320 | 0.802119 | 6.524384e-49 | -8.615850e-47 |
| Msa0241740 | Msa0799060 | 0.822515 | 2.273006e-53 | -8.615850e-47 |
| Msa0241740 | Msa0814250 | 0.806488 | 8.030298e-50 | -8.615850e-47 |
| Msa0241740 | Msa0817260 | 0.810605 | 1.060577e-50 | -8.615850e-47 |
| Msa0241740 | Msa0818170 | 0.811629 | 6.361360e-51 | -8.615850e-47 |
| Msa0241740 | Msa0820530 | -0.835611 | 1.517493e-56 | -8.615850e-47 |
| Msa0241740 | Msa0822170 | 0.805797 | 1.122395e-49 | -8.615850e-47 |
| Msa0241740 | Msa0825120 | 0.814908 | 1.212180e-51 | -8.615850e-47 |
| Msa0241740 | Msa0829190 | 0.806471 | 8.096690e-50 | -8.615850e-47 |
| Msa0241740 | Msa0861830 | 0.826175 | 3.133863e-54 | -8.615850e-47 |
| Msa0241740 | Msa0869010 | 0.813074 | 3.076572e-51 | -8.615850e-47 |
| Msa0241740 | Msa0876860 | -0.833030 | 6.738953e-56 | -8.615850e-47 |
| Msa0241740 | Msa0879860 | 0.823077 | 1.682251e-53 | -8.615850e-47 |
| Msa0241740 | Msa0891600 | -0.817384 | 3.391604e-52 | -8.615850e-47 |
| Msa0241740 | Msa0895310 | 0.804568 | 2.029895e-49 | -8.615850e-47 |
| Msa0241740 | Msa0905380 | 0.809144 | 2.187541e-50 | -8.615850e-47 |
| Msa0241740 | Msa0921870 | 0.814984 | 1.166392e-51 | -8.615850e-47 |
| Msa0241740 | Msa0924150 | -0.826305 | 2.918823e-54 | -8.615850e-47 |
| Msa0241740 | Msa0930820 | 0.846913 | 1.610895e-59 | -8.615850e-47 |
| Msa0241740 | Msa0937330 | 0.846855 | 1.671167e-59 | -8.615850e-47 |
| Msa0241740 | Msa0943270 | 0.812853 | 3.439702e-51 | -8.615850e-47 |
| Msa0241740 | Msa0944730 | 0.831075 | 2.049671e-55 | -8.615850e-47 |
| Msa0241740 | Msa0959010 | 0.815307 | 9.886296e-52 | -8.615850e-47 |
| Msa0241740 | Msa1010460 | 0.834778 | 2.461599e-56 | -8.615850e-47 |
| Msa0241740 | Msa1021510 | 0.826685 | 2.368868e-54 | -8.615850e-47 |
| Msa0241740 | Msa1033970 | 0.810431 | 1.156441e-50 | -8.615850e-47 |
| Msa0241740 | Msa1036740 | 0.837810 | 4.173334e-57 | -8.615850e-47 |
| Msa0241740 | Msa1045450 | 0.810135 | 1.340118e-50 | -8.615850e-47 |
| Msa0241740 | Msa1073400 | 0.826151 | 3.175207e-54 | -8.615850e-47 |
| Msa0241740 | Msa1073830 | 0.808245 | 3.404648e-50 | -8.615850e-47 |
| Msa0241740 | Msa1094430 | 0.818490 | 1.907192e-52 | -8.615850e-47 |
| Msa0241740 | Msa1096550 | 0.843368 | 1.463127e-58 | -8.615850e-47 |
| Msa0241740 | Msa1105500 | 0.826827 | 2.190579e-54 | -8.615850e-47 |
| Msa0241740 | Msa1113590 | 0.823138 | 1.627800e-53 | -8.615850e-47 |
| Msa0241740 | Msa1113880 | 0.850029 | 2.211234e-60 | -8.615850e-47 |
| Msa0241740 | Msa1122780 | 0.805886 | 1.074866e-49 | -8.615850e-47 |
| Msa0241740 | Msa1144970 | 0.828201 | 1.025329e-54 | -8.615850e-47 |
| Msa0241740 | Msa1152950 | 0.827152 | 1.831705e-54 | -8.615850e-47 |
| Msa0241740 | Msa1160360 | 0.811173 | 7.990578e-51 | -8.615850e-47 |
| Msa0241740 | Msa1163870 | 0.817226 | 3.679871e-52 | -8.615850e-47 |
| Msa0241740 | Msa1164020 | 0.812627 | 3.855128e-51 | -8.615850e-47 |
| Msa0241740 | Msa1172130 | -0.808371 | 3.200522e-50 | -8.615850e-47 |
| Msa0241740 | Msa1174310 | 0.869705 | 2.533621e-66 | -8.615850e-47 |
| Msa0241740 | Msa1176360 | 0.833647 | 4.728277e-56 | -8.615850e-47 |
| Msa0241740 | Msa1176980 | 0.801037 | 1.087516e-48 | -8.615850e-47 |
| Msa0241740 | Msa1182640 | 0.828412 | 9.123004e-55 | -8.615850e-47 |
| Msa0241740 | Msa1183770 | 0.806285 | 8.857994e-50 | -8.615850e-47 |
| Msa0241740 | Msa1199590 | 0.808445 | 3.087041e-50 | -8.615850e-47 |
| Msa0241740 | Msa1199710 | 0.802353 | 5.839737e-49 | -8.615850e-47 |
| Msa0241740 | Msa1205480 | 0.810991 | 8.753010e-51 | -8.615850e-47 |
| Msa0241740 | Msa1229850 | 0.813192 | 2.898228e-51 | -8.615850e-47 |
| Msa0241740 | Msa1233950 | 0.809353 | 1.972980e-50 | -8.615850e-47 |
| Msa0241740 | Msa1235400 | 0.836579 | 8.614414e-57 | -8.615850e-47 |
| Msa0241740 | Msa1236390 | 0.802794 | 4.737442e-49 | -8.615850e-47 |
| Msa0241740 | Msa1253810 | 0.842129 | 3.122015e-58 | -8.615850e-47 |
| Msa0241740 | Msa1258370 | 0.800753 | 1.243285e-48 | -8.615850e-47 |
| Msa0241740 | Msa1272520 | 0.824296 | 8.716928e-54 | -8.615850e-47 |
| Msa0241740 | Msa1276510 | 0.815922 | 7.213490e-52 | -8.615850e-47 |
| Msa0241740 | Msa1280620 | 0.810018 | 1.419751e-50 | -8.615850e-47 |
| Msa0241740 | Msa1293590 | 0.808481 | 3.032800e-50 | -8.615850e-47 |
| Msa0241740 | Msa1296300 | 0.854444 | 1.225886e-61 | -8.615850e-47 |
| Msa0241740 | Msa1307550 | 0.808562 | 2.913533e-50 | -8.615850e-47 |
| Msa0241740 | Msa1310660 | 0.840429 | 8.740750e-58 | -8.615850e-47 |
| Msa0241740 | Msa1314770 | 0.856013 | 4.287083e-62 | -8.615850e-47 |
| Msa0241740 | Msa1328730 | 0.800253 | 1.571984e-48 | -8.615850e-47 |
| Msa0241740 | Msa1331280 | 0.809485 | 1.849150e-50 | -8.615850e-47 |
| Msa0241740 | Msa1335710 | 0.814286 | 1.664944e-51 | -8.615850e-47 |
| Msa0241740 | Msa1338250 | 0.816337 | 5.826810e-52 | -8.615850e-47 |
| Msa0241740 | Msa1338610 | 0.809682 | 1.676910e-50 | -8.615850e-47 |
| Msa0241740 | Msa1340830 | 0.824229 | 9.038812e-54 | -8.615850e-47 |
| Msa0241740 | Msa1350690 | 0.834796 | 2.436785e-56 | -8.615850e-47 |
| Msa0241740 | Msa1360280 | 0.807499 | 4.907339e-50 | -8.615850e-47 |
| Msa0241740 | Msa1363700 | 0.841912 | 3.563726e-58 | -8.615850e-47 |
| Msa0241740 | Msa1371090 | 0.803298 | 3.726696e-49 | -8.615850e-47 |
| Msa0241740 | Msa1372290 | 0.821736 | 3.444676e-53 | -8.615850e-47 |
| Msa0241740 | Msa1372310 | 0.816447 | 5.505119e-52 | -8.615850e-47 |
| Msa0241740 | Msa1385350 | 0.808375 | 3.193703e-50 | -8.615850e-47 |
| Msa0241740 | Msa1393800 | 0.824752 | 6.809294e-54 | -8.615850e-47 |
| Msa0241740 | Msa1396940 | 0.850475 | 1.657527e-60 | -8.615850e-47 |
| Msa0241740 | Msa1417810 | -0.824816 | 6.575929e-54 | -8.615850e-47 |
| Msa0241740 | Msa1422840 | 0.835584 | 1.541245e-56 | -8.615850e-47 |
| Msa0241740 | Msa1424780 | 0.803377 | 3.588954e-49 | -8.615850e-47 |
| Msa0241740 | Msa1426910 | 0.802637 | 5.104856e-49 | -8.615850e-47 |
| Msa0241740 | Msa1433220 | 0.804306 | 2.301852e-49 | -8.615850e-47 |
| Msa0241740 | Msa1435400 | 0.823618 | 1.257054e-53 | -8.615850e-47 |
| Msa0241740 | Msa1445400 | -0.825566 | 4.370277e-54 | -8.615850e-47 |
| Msa0241740 | Msa1445960 | 0.805295 | 1.430232e-49 | -8.615850e-47 |
| Msa0241740 | Msa1449350 | -0.832890 | 7.300471e-56 | -8.615850e-47 |
| Msa0241740 | Msa1452470 | 0.804972 | 1.671254e-49 | -8.615850e-47 |
| Msa0241740 | Msa1458030 | 0.840117 | 1.054729e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0241740 | MtrunA17_Chr2g0293381 | 97.980 | 297 | 6 | 0 | 1 | 297 | 1 | 297 | 0.0 | 588 |
| Msa0241740 | MtrunA17_Chr8g0384671 | 74.689 | 241 | 55 | 2 | 1 | 239 | 1 | 237 | 1.14e-126 | 363 |
| Msa0241740 | MtrunA17_Chr4g0054131 | 44.664 | 253 | 124 | 5 | 1 | 239 | 1 | 251 | 5.83e-64 | 203 |
| Msa0241740 | MtrunA17_Chr5g0401061 | 48.548 | 241 | 111 | 6 | 1 | 236 | 1 | 233 | 9.67e-64 | 202 |
| Msa0241740 | MtrunA17_Chr8g0383821 | 64.000 | 125 | 45 | 0 | 1 | 125 | 1 | 125 | 4.92e-52 | 167 |
| Msa0241740 | MtrunA17_Chr1g0195251 | 63.636 | 121 | 41 | 2 | 125 | 245 | 295 | 412 | 1.88e-39 | 143 |
| Msa0241740 | MtrunA17_Chr8g0342871 | 33.108 | 296 | 155 | 7 | 1 | 282 | 1 | 267 | 2.63e-32 | 120 |
| Msa0241740 | MtrunA17_Chr2g0329921 | 35.349 | 215 | 108 | 4 | 1 | 190 | 1 | 209 | 1.48e-28 | 111 |
| Msa0241740 | MtrunA17_Chr1g0166681 | 67.123 | 73 | 23 | 1 | 1 | 73 | 1 | 72 | 5.30e-27 | 104 |
| Msa0241740 | MtrunA17_Chr1g0195261 | 72.000 | 50 | 14 | 0 | 1 | 50 | 1 | 50 | 3.22e-20 | 82.0 |
| Msa0241740 | MtrunA17_Chr2g0293401 | 61.538 | 65 | 25 | 0 | 59 | 123 | 1 | 65 | 8.67e-19 | 79.0 |
| Msa0241740 | MtrunA17_Chr8g0383841 | 67.442 | 86 | 19 | 1 | 187 | 263 | 2 | 87 | 2.45e-14 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0241740 | AT1G49950.3 | 57.895 | 247 | 91 | 6 | 1 | 241 | 1 | 240 | 4.73e-88 | 265 |
| Msa0241740 | AT1G49950.1 | 57.895 | 247 | 91 | 6 | 1 | 241 | 1 | 240 | 4.73e-88 | 265 |
| Msa0241740 | AT1G49950.2 | 57.895 | 247 | 91 | 6 | 1 | 241 | 1 | 240 | 4.73e-88 | 265 |
| Msa0241740 | AT3G49850.1 | 42.735 | 234 | 128 | 3 | 1 | 232 | 1 | 230 | 3.77e-53 | 176 |
| Msa0241740 | AT3G49850.2 | 42.735 | 234 | 128 | 3 | 1 | 232 | 1 | 230 | 3.77e-53 | 176 |
| Msa0241740 | AT5G67580.2 | 43.210 | 243 | 131 | 5 | 1 | 239 | 1 | 240 | 1.77e-52 | 174 |
| Msa0241740 | AT5G67580.1 | 43.210 | 243 | 131 | 5 | 1 | 239 | 1 | 240 | 1.77e-52 | 174 |
| Msa0241740 | AT1G72740.2 | 37.056 | 197 | 121 | 2 | 1 | 197 | 1 | 194 | 5.43e-32 | 120 |
| Msa0241740 | AT1G72740.1 | 36.453 | 203 | 120 | 3 | 1 | 197 | 1 | 200 | 1.13e-29 | 114 |
| Msa0241740 | AT1G17520.4 | 38.342 | 193 | 112 | 2 | 1 | 187 | 1 | 192 | 2.25e-28 | 110 |
| Msa0241740 | AT1G17520.1 | 39.572 | 187 | 106 | 2 | 1 | 181 | 1 | 186 | 1.75e-27 | 108 |
| Msa0241740 | AT1G17520.3 | 38.144 | 194 | 112 | 3 | 1 | 187 | 1 | 193 | 5.84e-27 | 107 |
| Msa0241740 | AT1G17520.2 | 39.362 | 188 | 106 | 3 | 1 | 181 | 1 | 187 | 4.75e-26 | 104 |
| Msa0241740 | AT1G54260.1 | 45.205 | 73 | 40 | 0 | 120 | 192 | 2 | 74 | 3.68e-12 | 64.7 |
Find 94 sgRNAs with CRISPR-Local
Find 337 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTCCTAAATTCACATTAAA+TGG | 0.080322 | 2_2:+17690551 | None:intergenic |
| GGATTACATATGATATTATT+TGG | 0.094051 | 2_2:-17686183 | Msa0241740:three_prime_UTR |
| AGAGATATGCCGCAAATTTC+TGG | 0.156146 | 2_2:-17689501 | Msa0241740:CDS |
| AAGCCAAGATTTACCGTCTT+TGG | 0.203558 | 2_2:+17686265 | None:intergenic |
| AACCCATTTAATGTGAATTT+AGG | 0.205428 | 2_2:-17690554 | Msa0241740:five_prime_UTR |
| ACACCCATCAACATTATTAT+TGG | 0.217687 | 2_2:-17686553 | Msa0241740:CDS |
| CTATAACTTAATACATTAAT+AGG | 0.258059 | 2_2:-17686225 | Msa0241740:three_prime_UTR |
| TAGATATAGCTTCCATTATA+AGG | 0.267054 | 2_2:+17688767 | None:intergenic |
| TCATCATCACTTAGAGAAAA+AGG | 0.267733 | 2_2:+17689555 | None:intergenic |
| TATGGAAGAGCAAATAAAAT+TGG | 0.273546 | 2_2:+17686155 | None:intergenic |
| GGACATGTAGAAGATTCTTT+TGG | 0.291674 | 2_2:-17686204 | Msa0241740:three_prime_UTR |
| GTATTCTGTAGGACCATTAC+TGG | 0.323222 | 2_2:-17687645 | Msa0241740:intron |
| AATGAAAAGGGTGCATTATC+AGG | 0.328121 | 2_2:-17689613 | Msa0241740:CDS |
| GATTACATATGATATTATTT+GGG | 0.336628 | 2_2:-17686182 | Msa0241740:three_prime_UTR |
| AGCCAAGATTTACCGTCTTT+GGG | 0.343837 | 2_2:+17686266 | None:intergenic |
| TCAAGCATGGGGTGGGTAAA+TGG | 0.345523 | 2_2:-17689875 | Msa0241740:CDS |
| CCTTCCAATAATAATGTTGA+TGG | 0.370851 | 2_2:+17686549 | None:intergenic |
| TATAAAACATGGTTAAATTC+AGG | 0.375074 | 2_2:+17689834 | None:intergenic |
| TTATTGGAAGGGAGGCAAAA+AGG | 0.396790 | 2_2:-17686537 | Msa0241740:CDS |
| TCGGTCAAATGTTGATCTAA+AGG | 0.406182 | 2_2:-17689808 | Msa0241740:intron |
| AATACACGAGGACAACTCTA+TGG | 0.413485 | 2_2:-17689586 | Msa0241740:CDS |
| GTCCTAAATTCACATTAAAT+GGG | 0.419607 | 2_2:+17690552 | None:intergenic |
| GGGTTGTTGGATAGGATAAA+TGG | 0.426577 | 2_2:-17689692 | Msa0241740:intron |
| TTCAGGTGAAGCGCAGGTAT+AGG | 0.433823 | 2_2:-17686611 | Msa0241740:intron |
| TTCTAATTCTAAATCGATCT+CGG | 0.439248 | 2_2:+17686470 | None:intergenic |
| CACCCAAAGACGGTAAATCT+TGG | 0.442023 | 2_2:-17686268 | Msa0241740:exon |
| TTCTAAATCGATCTCGGACT+TGG | 0.444342 | 2_2:+17686476 | None:intergenic |
| CTCTTCAGCCTCCGCCATGA+GGG | 0.446885 | 2_2:+17686380 | None:intergenic |
| TTGTAGAAGCTGAAAGGAAA+AGG | 0.451081 | 2_2:-17686305 | Msa0241740:CDS |
| CAGGTTGGATAACCTTATAA+TGG | 0.457504 | 2_2:-17688779 | Msa0241740:CDS |
| GGAGGCAGAGGCTGCAGAAG+CGG | 0.467500 | 2_2:-17686349 | Msa0241740:CDS |
| AATCGATCTCGGACTTGGTA+TGG | 0.471610 | 2_2:+17686481 | None:intergenic |
| CTTCCTCTGTCTGAATATGC+TGG | 0.476422 | 2_2:+17686576 | None:intergenic |
| AGCCAAAGGGAGCAATGAAA+AGG | 0.479925 | 2_2:-17689626 | Msa0241740:CDS |
| CCTCATGGCGGAGGCTGAAG+AGG | 0.487598 | 2_2:-17686379 | Msa0241740:CDS |
| AACCATTGCTTCTTTCATTG+AGG | 0.488576 | 2_2:-17688713 | Msa0241740:intron |
| TGCTCGAGCAGTTGCTGAAG+CGG | 0.494217 | 2_2:-17686406 | Msa0241740:CDS |
| GAGGAATCCGCACTTAAAGC+TGG | 0.499504 | 2_2:-17689903 | Msa0241740:CDS |
| CTGAAGTATCTTACATCTCG+TGG | 0.499992 | 2_2:-17687586 | Msa0241740:CDS |
| GGCAGAGGCTGCAGAAGCGG+AGG | 0.501552 | 2_2:-17686346 | Msa0241740:CDS |
| AGCGGAAGCCCTCATGGCGG+AGG | 0.503203 | 2_2:-17686388 | Msa0241740:CDS |
| CCTCTTCAGCCTCCGCCATG+AGG | 0.504586 | 2_2:+17686379 | None:intergenic |
| TGTATTATGCCCTCGCAAGC+AGG | 0.507530 | 2_2:+17686129 | None:intergenic |
| CCTCACCGCTGCGTTGTGAT+CGG | 0.511101 | 2_2:+17690481 | None:intergenic |
| TGCTGAAGCGGAAGCCCTCA+TGG | 0.511274 | 2_2:-17686394 | Msa0241740:CDS |
| ATAGAGTTGTCCTCGTGTAT+TGG | 0.517777 | 2_2:+17689588 | None:intergenic |
| GGCTGCCTCTTGTGCAGACA+TGG | 0.522460 | 2_2:+17686437 | None:intergenic |
| ATATCTAGCTTGAATGAACT+TGG | 0.526305 | 2_2:-17688751 | Msa0241740:CDS |
| ATCTCGTGGAAAACTGATCA+AGG | 0.527774 | 2_2:-17687572 | Msa0241740:intron |
| AACTGCTCGAGCAGCACATG+CGG | 0.528875 | 2_2:+17686416 | None:intergenic |
| TTCCATAAAACCTGCTTGCG+AGG | 0.531201 | 2_2:-17686139 | Msa0241740:three_prime_UTR |
| GGCAAGTGGATGGGCTTCGA+GGG | 0.532126 | 2_2:-17689652 | Msa0241740:CDS |
| TATTCTGTAGGACCATTACT+GGG | 0.533689 | 2_2:-17687644 | Msa0241740:intron |
| TTATATTTCAGGTGAAGCGC+AGG | 0.535455 | 2_2:-17686617 | Msa0241740:intron |
| AAGCTGGAGTTATCAAGCAT+GGG | 0.537538 | 2_2:-17689887 | Msa0241740:CDS |
| CTGTCTGAATATGCTGGAGT+AGG | 0.541994 | 2_2:+17686582 | None:intergenic |
| AAAGCTGGAGTTATCAAGCA+TGG | 0.542386 | 2_2:-17689888 | Msa0241740:CDS |
| TGGCAAGTGGATGGGCTTCG+AGG | 0.542668 | 2_2:-17689653 | Msa0241740:CDS |
| CCATCAACATTATTATTGGA+AGG | 0.543532 | 2_2:-17686549 | Msa0241740:CDS |
| AGAGGCAACAAAGGAGGCAG+AGG | 0.547850 | 2_2:-17686361 | Msa0241740:CDS |
| AGTCAGCAGGTGCCCAGTAA+TGG | 0.551122 | 2_2:+17687632 | None:intergenic |
| TCCATAAAACCTGCTTGCGA+GGG | 0.556748 | 2_2:-17686138 | Msa0241740:three_prime_UTR |
| CAACATTATTATTGGAAGGG+AGG | 0.564310 | 2_2:-17686545 | Msa0241740:CDS |
| CATCAACATTATTATTGGAA+GGG | 0.566044 | 2_2:-17686548 | Msa0241740:CDS |
| AAGGTCCATGTCTGCACAAG+AGG | 0.566181 | 2_2:-17686442 | Msa0241740:CDS |
| GCCAAAGGGAGCAATGAAAA+GGG | 0.571330 | 2_2:-17689625 | Msa0241740:CDS |
| TACCTCAATGAAAGAAGCAA+TGG | 0.571520 | 2_2:+17688711 | None:intergenic |
| TCTAGCTTGAATGAACTTGG+TGG | 0.579223 | 2_2:-17688748 | Msa0241740:CDS |
| TGAGCGTGATGGCAAGTGGA+TGG | 0.581001 | 2_2:-17689662 | Msa0241740:CDS |
| GAGCGTGATGGCAAGTGGAT+GGG | 0.581966 | 2_2:-17689661 | Msa0241740:CDS |
| GGAGTTATCAAGCATGGGGT+GGG | 0.587974 | 2_2:-17689882 | Msa0241740:CDS |
| CTTCCAATAATAATGTTGAT+GGG | 0.591104 | 2_2:+17686550 | None:intergenic |
| TTAGATCAACATTTGACCGA+AGG | 0.594489 | 2_2:+17689811 | None:intergenic |
| GGAGGCTGAAGAGGCAACAA+AGG | 0.596715 | 2_2:-17686370 | Msa0241740:CDS |
| TGGAGTTATCAAGCATGGGG+TGG | 0.597697 | 2_2:-17689883 | Msa0241740:CDS |
| GGCTTCGAGGGAGAAGCCAA+AGG | 0.598632 | 2_2:-17689640 | Msa0241740:CDS |
| GGCTGAAGAGGCAACAAAGG+AGG | 0.605389 | 2_2:-17686367 | Msa0241740:CDS |
| ATGGCGAAATTTGAGCGTGA+TGG | 0.606348 | 2_2:-17689673 | Msa0241740:CDS |
| AGAAGCGGAGGCAGATGCAA+TGG | 0.616552 | 2_2:-17686334 | Msa0241740:CDS |
| ATTAAGTTATAGTATGACAA+AGG | 0.618209 | 2_2:+17686236 | None:intergenic |
| AGCTGAAAGGAAAAGGCTGA+AGG | 0.619969 | 2_2:-17686298 | Msa0241740:CDS |
| GCTTCGAGGGAGAAGCCAAA+GGG | 0.621979 | 2_2:-17689639 | Msa0241740:CDS |
| GGTTAAATTCAGGATCCTTG+AGG | 0.623114 | 2_2:+17689844 | None:intergenic |
| AATTTGAGCGTGATGGCAAG+TGG | 0.631289 | 2_2:-17689666 | Msa0241740:CDS |
| ATATCTCTTGAAACTTGAAG+AGG | 0.637010 | 2_2:+17689516 | None:intergenic |
| TTGACCGAAGGTATAAAACA+TGG | 0.643379 | 2_2:+17689823 | None:intergenic |
| CCGATCACAACGCAGCGGTG+AGG | 0.645405 | 2_2:-17690481 | Msa0241740:intron |
| GATAACTCCAGCTTTAAGTG+CGG | 0.649462 | 2_2:+17689896 | None:intergenic |
| AGCTGGAGTTATCAAGCATG+GGG | 0.657193 | 2_2:-17689886 | Msa0241740:CDS |
| CAGCGCCGATCACAACGCAG+CGG | 0.700024 | 2_2:-17690486 | Msa0241740:five_prime_UTR |
| ACTCCAGCATATTCAGACAG+AGG | 0.701760 | 2_2:-17686579 | Msa0241740:CDS |
| TAAATGGCGTACGATCCTCA+AGG | 0.711423 | 2_2:-17689859 | Msa0241740:CDS |
| TTATCAGGCACCAATACACG+AGG | 0.743899 | 2_2:-17689598 | Msa0241740:CDS |
| TGAAGCGGAAGCCCTCATGG+CGG | 0.749745 | 2_2:-17686391 | Msa0241740:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATAAAATAAAATAATT+GGG | + | chr2_2:17687176-17687195 | None:intergenic | 0.0% |
| !!! | AATTTTTATAGATTTTGTTT+TGG | - | chr2_2:17686300-17686319 | Msa0241740:CDS | 10.0% |
| !!! | AATTTTTATAGATTTTGTTT+TGG | - | chr2_2:17686300-17686319 | Msa0241740:CDS | 10.0% |
| !! | AATATCTTAGAAAATTTATT+GGG | - | chr2_2:17688082-17688101 | Msa0241740:intron | 10.0% |
| !! | AATATCTTAGAAAATTTATT+GGG | - | chr2_2:17688082-17688101 | Msa0241740:intron | 10.0% |
| !!! | ATTTAGAATTAGAAAAAATA+AGG | - | chr2_2:17690163-17690182 | Msa0241740:intron | 10.0% |
| !!! | TTTATACCTATGATTTTTTT+GGG | + | chr2_2:17686048-17686067 | None:intergenic | 15.0% |
| !!! | ATTTATACCTATGATTTTTT+TGG | + | chr2_2:17686049-17686068 | None:intergenic | 15.0% |
| !! | TAAATAAATGATTCCTTTAT+AGG | + | chr2_2:17687808-17687827 | None:intergenic | 15.0% |
| !! | GAATATCTTAGAAAATTTAT+TGG | - | chr2_2:17688081-17688100 | Msa0241740:intron | 15.0% |
| !! | GAATATCTTAGAAAATTTAT+TGG | - | chr2_2:17688081-17688100 | Msa0241740:intron | 15.0% |
| !!! | AATTTGAGATTTTATTTCAT+GGG | - | chr2_2:17689977-17689996 | Msa0241740:intron | 15.0% |
| !! | CTATAACTTAATACATTAAT+AGG | - | chr2_2:17690399-17690418 | Msa0241740:intron | 15.0% |
| !! | GATTACATATGATATTATTT+GGG | - | chr2_2:17690442-17690461 | Msa0241740:intron | 15.0% |
| !! | GATATAGAGTATAAGTATTT+CGG | - | chr2_2:17686450-17686469 | Msa0241740:CDS | 20.0% |
| !! | AAACTAAAACTTTCCTATAT+GGG | + | chr2_2:17686516-17686535 | None:intergenic | 20.0% |
| !! | AAAACTAAAACTTTCCTATA+TGG | + | chr2_2:17686517-17686536 | None:intergenic | 20.0% |
| !!! | TATAGGAAAGTTTTAGTTTT+AGG | - | chr2_2:17686517-17686536 | Msa0241740:CDS | 20.0% |
| !! | ATTTGATGTATTTATGATGT+TGG | - | chr2_2:17686631-17686650 | Msa0241740:intron | 20.0% |
| !! | TATAAAACATGGTTAAATTC+AGG | + | chr2_2:17686793-17686812 | None:intergenic | 20.0% |
| !! | GTAATGAATTGAATTAATGT+TGG | - | chr2_2:17686875-17686894 | Msa0241740:intron | 20.0% |
| !! | TATTTATCTTGATCAACTAT+TGG | - | chr2_2:17687575-17687594 | Msa0241740:CDS | 20.0% |
| !!! | AAATAATTTTATAGTGCAGT+CGG | - | chr2_2:17687636-17687655 | Msa0241740:CDS | 20.0% |
| !! | TTTGTACTAATCATAGAATA+TGG | + | chr2_2:17688116-17688135 | None:intergenic | 20.0% |
| !! | TTTGTACTAATCATAGAATA+TGG | + | chr2_2:17688116-17688135 | None:intergenic | 20.0% |
| !! | TTCTATGATTAGTACAAATA+TGG | - | chr2_2:17688118-17688137 | Msa0241740:intron | 20.0% |
| !! | TCTATGATTAGTACAAATAT+GGG | - | chr2_2:17688207-17688226 | Msa0241740:intron | 20.0% |
| !!! | ATTTTCTTCTATACAATTCT+AGG | + | chr2_2:17688461-17688480 | None:intergenic | 20.0% |
| !!! | ATACACATCTATTTGAAATA+GGG | - | chr2_2:17689706-17689725 | Msa0241740:intron | 20.0% |
| !! | TTTAAGTCTACATTAGAAAA+TGG | + | chr2_2:17689833-17689852 | None:intergenic | 20.0% |
| !! | TAAATGTATAAGACTAAATC+AGG | + | chr2_2:17689896-17689915 | None:intergenic | 20.0% |
| !!! | CAATTTGAGATTTTATTTCA+TGG | - | chr2_2:17689976-17689995 | Msa0241740:intron | 20.0% |
| !! | ATTAAGTTATAGTATGACAA+AGG | + | chr2_2:17690391-17690410 | None:intergenic | 20.0% |
| !! | GGATTACATATGATATTATT+TGG | - | chr2_2:17690441-17690460 | Msa0241740:intron | 20.0% |
| !!! | TTCTAATCATTTTAGATGAT+CGG | + | chr2_2:17690536-17690555 | None:intergenic | 20.0% |
| ! | AAATGACCCAAAAAAATCAT+AGG | - | chr2_2:17686039-17686058 | Msa0241740:three_prime_UTR | 25.0% |
| ! | AACCCATTTAATGTGAATTT+AGG | - | chr2_2:17686070-17686089 | Msa0241740:three_prime_UTR | 25.0% |
| ! | GTCCTAAATTCACATTAAAT+GGG | + | chr2_2:17686075-17686094 | None:intergenic | 25.0% |
| ! | TGTCCTAAATTCACATTAAA+TGG | + | chr2_2:17686076-17686095 | None:intergenic | 25.0% |
| !!! | GTTTCTTGTGTTTTTGATTT+AGG | + | chr2_2:17686114-17686133 | None:intergenic | 25.0% |
| ! | TATGAAATGAAATCGGAAAA+AGG | + | chr2_2:17686185-17686204 | None:intergenic | 25.0% |
| ! | ATCGGAATATGAAATGAAAT+CGG | + | chr2_2:17686192-17686211 | None:intergenic | 25.0% |
| !!! | ATTTTGTTTTGGAATTCTCT+AGG | - | chr2_2:17686311-17686330 | Msa0241740:CDS | 25.0% |
| !!! | TTTTGTTTTGGAATTCTCTA+GGG | - | chr2_2:17686312-17686331 | Msa0241740:CDS | 25.0% |
| !!! | AATTCTCTAGGGTTTTTTTT+TGG | - | chr2_2:17686323-17686342 | Msa0241740:CDS | 25.0% |
| !!! | ATTCTCTAGGGTTTTTTTTT+GGG | - | chr2_2:17686324-17686343 | Msa0241740:CDS | 25.0% |
| !!! | CTTTGATCCAATGTATTTTT+TGG | - | chr2_2:17686487-17686506 | Msa0241740:CDS | 25.0% |
| !!! | TATTTTTTGGTTACCCATAT+AGG | - | chr2_2:17686500-17686519 | Msa0241740:CDS | 25.0% |
| !! | TTAACCATGTTTTATACCTT+CGG | - | chr2_2:17686797-17686816 | Msa0241740:intron | 25.0% |
| !! | GCTTATTTATTCATTTGTTG+TGG | - | chr2_2:17686853-17686872 | Msa0241740:intron | 25.0% |
| ! | ATTAAAATTCCACTATGCTA+TGG | + | chr2_2:17687256-17687275 | None:intergenic | 25.0% |
| ! | TAGATTCTCTGATTGAAATA+CGG | - | chr2_2:17687335-17687354 | Msa0241740:intron | 25.0% |
| ! | AATCCTATTCAATTCTTGAT+GGG | - | chr2_2:17687361-17687380 | Msa0241740:intron | 25.0% |
| ! | CAAAACAAGATAATGAAATC+AGG | + | chr2_2:17687743-17687762 | None:intergenic | 25.0% |
| ! | TAGATATAGCTTCCATTATA+AGG | + | chr2_2:17687860-17687879 | None:intergenic | 25.0% |
| ! | ATCTTAGAAAATTTATTGGG+AGG | - | chr2_2:17688085-17688104 | Msa0241740:intron | 25.0% |
| ! | ATCTTAGAAAATTTATTGGG+AGG | - | chr2_2:17688085-17688104 | Msa0241740:intron | 25.0% |
| ! | GATATTGTCTTGTAAATGAT+AGG | + | chr2_2:17688426-17688445 | None:intergenic | 25.0% |
| !! | TTCATCATTTTGTATTCTGT+AGG | - | chr2_2:17688968-17688987 | Msa0241740:intron | 25.0% |
| ! | TATTGTAAGTTTGCATTAGA+TGG | + | chr2_2:17689113-17689132 | None:intergenic | 25.0% |
| !!! | TAATACCATCTAGTGTTTTT+TGG | + | chr2_2:17689291-17689310 | None:intergenic | 25.0% |
| ! | AAAAAACTTAAGACTCACAT+TGG | - | chr2_2:17689394-17689413 | Msa0241740:intron | 25.0% |
| ! | TATACCAATTATATGACTGT+AGG | - | chr2_2:17689497-17689516 | Msa0241740:CDS | 25.0% |
| ! | TAGCTGAATAAAATAATCTC+AGG | - | chr2_2:17689561-17689580 | Msa0241740:CDS | 25.0% |
| ! | AATAAAATAATCTCAGGACA+AGG | - | chr2_2:17689567-17689586 | Msa0241740:CDS | 25.0% |
| ! | ATAAAATAATCTCAGGACAA+GGG | - | chr2_2:17689568-17689587 | Msa0241740:CDS | 25.0% |
| !! | CATACACATCTATTTGAAAT+AGG | - | chr2_2:17689705-17689724 | Msa0241740:intron | 25.0% |
| !! | TACACATCTATTTGAAATAG+GGG | - | chr2_2:17689707-17689726 | Msa0241740:intron | 25.0% |
| ! | CATTTATTGTGAGCTATATT+TGG | - | chr2_2:17689910-17689929 | Msa0241740:CDS | 25.0% |
| !!! | TGGGTTGAATTTTATATTTC+AGG | - | chr2_2:17689996-17690015 | Msa0241740:intron | 25.0% |
| ! | CTTCCAATAATAATGTTGAT+GGG | + | chr2_2:17690077-17690096 | None:intergenic | 25.0% |
| ! | CATCAACATTATTATTGGAA+GGG | - | chr2_2:17690076-17690095 | Msa0241740:intron | 25.0% |
| ! | TTCTAATTCTAAATCGATCT+CGG | + | chr2_2:17690157-17690176 | None:intergenic | 25.0% |
| ! | TATGGAAGAGCAAATAAAAT+TGG | + | chr2_2:17690472-17690491 | None:intergenic | 25.0% |
| TGAAATCGGAAAAAGGAAAT+CGG | + | chr2_2:17686178-17686197 | None:intergenic | 30.0% | |
| !!! | TTCTCTAGGGTTTTTTTTTG+GGG | - | chr2_2:17686325-17686344 | Msa0241740:CDS | 30.0% |
| TGGGTAACCAAAAAATACAT+TGG | + | chr2_2:17686497-17686516 | None:intergenic | 30.0% | |
| ATAAAACAATCAAAACTCGC+AGG | + | chr2_2:17686574-17686593 | None:intergenic | 30.0% | |
| ! | ATTTTCTGTATTGCTCGAAA+TGG | - | chr2_2:17686669-17686688 | Msa0241740:intron | 30.0% |
| ! | TTTTCTGTATTGCTCGAAAT+GGG | - | chr2_2:17686670-17686689 | Msa0241740:intron | 30.0% |
| ! | ACCTTTAGATCCAGATTTTA+CGG | + | chr2_2:17686902-17686921 | None:intergenic | 30.0% |
| ATCTAAAGGTTTCGTTATGT+GGG | - | chr2_2:17686912-17686931 | Msa0241740:intron | 30.0% | |
| TCATCATCACTTAGAGAAAA+AGG | + | chr2_2:17687072-17687091 | None:intergenic | 30.0% | |
| ATATCTCTTGAAACTTGAAG+AGG | + | chr2_2:17687111-17687130 | None:intergenic | 30.0% | |
| ! | ACCTTATACTAGAGCTTTTT+GGG | + | chr2_2:17687149-17687168 | None:intergenic | 30.0% |
| ! | AACCTTATACTAGAGCTTTT+TGG | + | chr2_2:17687150-17687169 | None:intergenic | 30.0% |
| ! | AAAAAGCTCTAGTATAAGGT+TGG | - | chr2_2:17687149-17687168 | Msa0241740:intron | 30.0% |
| ! | AAAAGCTCTAGTATAAGGTT+GGG | - | chr2_2:17687150-17687169 | Msa0241740:intron | 30.0% |
| AGATTCTCTGATTGAAATAC+GGG | - | chr2_2:17687336-17687355 | Msa0241740:intron | 30.0% | |
| GAATCCTATTCAATTCTTGA+TGG | - | chr2_2:17687360-17687379 | Msa0241740:intron | 30.0% | |
| ! | GTTTTGCGTGAATCATATAA+AGG | - | chr2_2:17687757-17687776 | Msa0241740:intron | 30.0% |
| TAACTGTGTTTACGTTATAC+AGG | - | chr2_2:17687826-17687845 | Msa0241740:intron | 30.0% | |
| ! | ATATCTAGCTTGAATGAACT+TGG | - | chr2_2:17687873-17687892 | Msa0241740:intron | 30.0% |
| AAGCAGAACAAATAAAAGTG+TGG | + | chr2_2:17687956-17687975 | None:intergenic | 30.0% | |
| ! | CATGTTGTTATTCTAACTTC+AGG | - | chr2_2:17687992-17688011 | Msa0241740:intron | 30.0% |
| TGAATTGCTATATGGTCATA+TGG | - | chr2_2:17688283-17688302 | Msa0241740:intron | 30.0% | |
| !! | CAATTCTAGGACTATAAACA+AGG | + | chr2_2:17688448-17688467 | None:intergenic | 30.0% |
| !! | TTTGATTTTGCTAGCTAAGT+TGG | - | chr2_2:17688578-17688597 | Msa0241740:intron | 30.0% |
| ! | TTGATTTTGCTAGCTAAGTT+GGG | - | chr2_2:17688579-17688598 | Msa0241740:intron | 30.0% |
| TGAAGCTAATTTGAGCTAAT+TGG | + | chr2_2:17688674-17688693 | None:intergenic | 30.0% | |
| TTGAAATAGCATCATAGATC+AGG | + | chr2_2:17688799-17688818 | None:intergenic | 30.0% | |
| AAGTGTTATAGCATTGCATT+TGG | - | chr2_2:17688883-17688902 | Msa0241740:intron | 30.0% | |
| !! | AAGATGCTTGGATTAGTATT+AGG | - | chr2_2:17689164-17689183 | Msa0241740:intron | 30.0% |
| TCTCACATTAGCTAGAAATA+AGG | - | chr2_2:17689198-17689217 | Msa0241740:intron | 30.0% | |
| AACTTGGTTCATGGAATATA+TGG | + | chr2_2:17689340-17689359 | None:intergenic | 30.0% | |
| !! | CGACATTAGAAGTTTTATGT+AGG | + | chr2_2:17689432-17689451 | None:intergenic | 30.0% |
| ACATAAAACTTCTAATGTCG+CGG | - | chr2_2:17689432-17689451 | Msa0241740:intron | 30.0% | |
| TAAAATAATCTCAGGACAAG+GGG | - | chr2_2:17689569-17689588 | Msa0241740:CDS | 30.0% | |
| !!! | AGTAGTGACTTTTTTCTTGA+AGG | - | chr2_2:17689640-17689659 | Msa0241740:CDS | 30.0% |
| AAGAAAATTACAACTCGACA+AGG | + | chr2_2:17689679-17689698 | None:intergenic | 30.0% | |
| ! | TTGGATGCTATTCTCATTTT+TGG | - | chr2_2:17689929-17689948 | Msa0241740:CDS | 30.0% |
| ACACCCATCAACATTATTAT+TGG | - | chr2_2:17690071-17690090 | Msa0241740:intron | 30.0% | |
| CCTTCCAATAATAATGTTGA+TGG | + | chr2_2:17690078-17690097 | None:intergenic | 30.0% | |
| CCATCAACATTATTATTGGA+AGG | - | chr2_2:17690075-17690094 | Msa0241740:intron | 30.0% | |
| ! | AAGGCTCTATGAAATTTTAC+AGG | - | chr2_2:17690106-17690125 | Msa0241740:intron | 30.0% |
| ! | AGGCTCTATGAAATTTTACA+GGG | - | chr2_2:17690107-17690126 | Msa0241740:intron | 30.0% |
| !!! | TCTCTAGGGTTTTTTTTTGG+GGG | - | chr2_2:17686326-17686345 | Msa0241740:CDS | 35.0% |
| !!! | TTTTTTTTGGGGGAGTTACT+AGG | - | chr2_2:17686336-17686355 | Msa0241740:CDS | 35.0% |
| !!! | TTTAGTTTTAGGCTCAGTCA+AGG | - | chr2_2:17686528-17686547 | Msa0241740:CDS | 35.0% |
| TTATGACTATGTAGAGCTCA+TGG | - | chr2_2:17686590-17686609 | Msa0241740:CDS | 35.0% | |
| !! | TCTTCTGACCATTTTTGCTT+AGG | + | chr2_2:17686700-17686719 | None:intergenic | 35.0% |
| ! | TTGACCGAAGGTATAAAACA+TGG | + | chr2_2:17686804-17686823 | None:intergenic | 35.0% |
| TTAGATCAACATTTGACCGA+AGG | + | chr2_2:17686816-17686835 | None:intergenic | 35.0% | |
| TCGGTCAAATGTTGATCTAA+AGG | - | chr2_2:17686816-17686835 | Msa0241740:intron | 35.0% | |
| TAATGTTGGACCGTAAAATC+TGG | - | chr2_2:17686889-17686908 | Msa0241740:intron | 35.0% | |
| ACCGTAAAATCTGGATCTAA+AGG | - | chr2_2:17686898-17686917 | Msa0241740:intron | 35.0% | |
| GATCTAAAGGTTTCGTTATG+TGG | - | chr2_2:17686911-17686930 | Msa0241740:intron | 35.0% | |
| ! | AATGAAAAGGGTGCATTATC+AGG | - | chr2_2:17687011-17687030 | Msa0241740:intron | 35.0% |
| TCAATCAGAGAATCTAACTG+AGG | + | chr2_2:17687331-17687350 | None:intergenic | 35.0% | |
| GATCCCATCAAGAATTGAAT+AGG | + | chr2_2:17687367-17687386 | None:intergenic | 35.0% | |
| GAAATTATCTTCCACTTGAG+GGG | + | chr2_2:17687418-17687437 | None:intergenic | 35.0% | |
| CGAAATTATCTTCCACTTGA+GGG | + | chr2_2:17687419-17687438 | None:intergenic | 35.0% | |
| TCGAAATTATCTTCCACTTG+AGG | + | chr2_2:17687420-17687439 | None:intergenic | 35.0% | |
| AGATGTTCGAACGTAATCAA+GGG | - | chr2_2:17687439-17687458 | Msa0241740:intron | 35.0% | |
| !! | GTTGATCGGCTTTTTGAAAA+AGG | - | chr2_2:17687515-17687534 | Msa0241740:intron | 35.0% |
| TCGGCAATTGTCTTTCAATT+AGG | - | chr2_2:17687655-17687674 | Msa0241740:intron | 35.0% | |
| CGGCAATTGTCTTTCAATTA+GGG | - | chr2_2:17687656-17687675 | Msa0241740:intron | 35.0% | |
| ATGAATGATCTTAACACGCT+TGG | + | chr2_2:17687696-17687715 | None:intergenic | 35.0% | |
| CAAGAATACAAGGAAAGCAA+TGG | + | chr2_2:17687720-17687739 | None:intergenic | 35.0% | |
| TGAAATCAGGCAAGAATACA+AGG | + | chr2_2:17687730-17687749 | None:intergenic | 35.0% | |
| ! | GTTTTGCTTGCATCCTATAA+AGG | - | chr2_2:17687792-17687811 | Msa0241740:intron | 35.0% |
| TGTGTTTACGTTATACAGGT+TGG | - | chr2_2:17687830-17687849 | Msa0241740:intron | 35.0% | |
| ! | CAGGTTGGATAACCTTATAA+TGG | - | chr2_2:17687845-17687864 | Msa0241740:intron | 35.0% |
| AACCATTGCTTCTTTCATTG+AGG | - | chr2_2:17687911-17687930 | Msa0241740:intron | 35.0% | |
| TACCTCAATGAAAGAAGCAA+TGG | + | chr2_2:17687916-17687935 | None:intergenic | 35.0% | |
| CTACCTTGTGAATTGCTATA+TGG | - | chr2_2:17688275-17688294 | Msa0241740:intron | 35.0% | |
| TGACCATATAGCAATTCACA+AGG | + | chr2_2:17688281-17688300 | None:intergenic | 35.0% | |
| ATTGCTATATGGTCATATGG+AGG | - | chr2_2:17688286-17688305 | Msa0241740:intron | 35.0% | |
| ATAGGTGAGATCATCTTAGT+GGG | + | chr2_2:17688364-17688383 | None:intergenic | 35.0% | |
| AATAGGTGAGATCATCTTAG+TGG | + | chr2_2:17688365-17688384 | None:intergenic | 35.0% | |
| ACTAAGATGATCTCACCTAT+TGG | - | chr2_2:17688364-17688383 | Msa0241740:intron | 35.0% | |
| CTAAGATGATCTCACCTATT+GGG | - | chr2_2:17688365-17688384 | Msa0241740:intron | 35.0% | |
| AGCAAGTGATTGTTACTCTA+GGG | + | chr2_2:17688400-17688419 | None:intergenic | 35.0% | |
| ! | TGATTTTGCTAGCTAAGTTG+GGG | - | chr2_2:17688580-17688599 | Msa0241740:intron | 35.0% |
| ! | CAGAGCTAGTTTGAAAAAGA+AGG | - | chr2_2:17688614-17688633 | Msa0241740:intron | 35.0% |
| CTCACTTGTCTTCAACATAA+TGG | + | chr2_2:17688651-17688670 | None:intergenic | 35.0% | |
| ! | TTAGCTCAAATTAGCTTCAG+TGG | - | chr2_2:17688675-17688694 | Msa0241740:intron | 35.0% |
| GTTATAGCATTGCATTTGGT+TGG | - | chr2_2:17688887-17688906 | Msa0241740:intron | 35.0% | |
| TATTCTGTAGGACCATTACT+GGG | - | chr2_2:17688980-17688999 | Msa0241740:intron | 35.0% | |
| !! | TTGCTTAACTCTAAGATGCT+TGG | - | chr2_2:17689152-17689171 | Msa0241740:intron | 35.0% |
| AGTGTCTATCCAGACATTAT+TGG | - | chr2_2:17689310-17689329 | Msa0241740:intron | 35.0% | |
| TTGGTTCATGGAATATATGG+TGG | + | chr2_2:17689337-17689356 | None:intergenic | 35.0% | |
| ACACTAACAAACTTGGTTCA+TGG | + | chr2_2:17689349-17689368 | None:intergenic | 35.0% | |
| !! | TGAACCAAGTTTGTTAGTGT+TGG | - | chr2_2:17689349-17689368 | Msa0241740:intron | 35.0% |
| !! | GAACCAAGTTTGTTAGTGTT+GGG | - | chr2_2:17689350-17689369 | Msa0241740:intron | 35.0% |
| !! | AACCAAGTTTGTTAGTGTTG+GGG | - | chr2_2:17689351-17689370 | Msa0241740:intron | 35.0% |
| TTGTGTAATGTGTAGGGTTT+GGG | + | chr2_2:17689470-17689489 | None:intergenic | 35.0% | |
| TTTGTGTAATGTGTAGGGTT+TGG | + | chr2_2:17689471-17689490 | None:intergenic | 35.0% | |
| CAGAGTTTGTGTAATGTGTA+GGG | + | chr2_2:17689476-17689495 | None:intergenic | 35.0% | |
| CAGACCTACAGTCATATAAT+TGG | + | chr2_2:17689504-17689523 | None:intergenic | 35.0% | |
| TGTTTCTTATATACAGCCGT+TGG | - | chr2_2:17689773-17689792 | Msa0241740:intron | 35.0% | |
| CAACATTATTATTGGAAGGG+AGG | - | chr2_2:17690079-17690098 | Msa0241740:intron | 35.0% | |
| ! | AAGCTTTTGTAGAAGCTGAA+AGG | - | chr2_2:17690313-17690332 | Msa0241740:intron | 35.0% |
| TTGTAGAAGCTGAAAGGAAA+AGG | - | chr2_2:17690319-17690338 | Msa0241740:intron | 35.0% | |
| ! | GGACATGTAGAAGATTCTTT+TGG | - | chr2_2:17690420-17690439 | Msa0241740:intron | 35.0% |
| ACTAGGAATTGTGACGACAA+AGG | - | chr2_2:17686353-17686372 | Msa0241740:CDS | 40.0% | |
| CTAGGAATTGTGACGACAAA+GGG | - | chr2_2:17686354-17686373 | Msa0241740:CDS | 40.0% | |
| AATTGTGACGACAAAGGGTA+TGG | - | chr2_2:17686359-17686378 | Msa0241740:CDS | 40.0% | |
| ! | ATTGTGACGACAAAGGGTAT+GGG | - | chr2_2:17686360-17686379 | Msa0241740:CDS | 40.0% |
| TGGGTGTTCCTAAGCAAAAA+TGG | - | chr2_2:17686689-17686708 | Msa0241740:intron | 40.0% | |
| GCAAAAATGGTCAGAAGAAG+AGG | - | chr2_2:17686702-17686721 | Msa0241740:intron | 40.0% | |
| !! | GATAACTCCAGCTTTAAGTG+CGG | + | chr2_2:17686731-17686750 | None:intergenic | 40.0% |
| AAAGCTGGAGTTATCAAGCA+TGG | - | chr2_2:17686736-17686755 | Msa0241740:intron | 40.0% | |
| AAGCTGGAGTTATCAAGCAT+GGG | - | chr2_2:17686737-17686756 | Msa0241740:intron | 40.0% | |
| GGTTAAATTCAGGATCCTTG+AGG | + | chr2_2:17686783-17686802 | None:intergenic | 40.0% | |
| GGGTTGTTGGATAGGATAAA+TGG | - | chr2_2:17686932-17686951 | Msa0241740:intron | 40.0% | |
| ATAGAGTTGTCCTCGTGTAT+TGG | + | chr2_2:17687039-17687058 | None:intergenic | 40.0% | |
| AATACACGAGGACAACTCTA+TGG | - | chr2_2:17687038-17687057 | Msa0241740:intron | 40.0% | |
| AGAGATATGCCGCAAATTTC+TGG | - | chr2_2:17687123-17687142 | Msa0241740:intron | 40.0% | |
| !! | CTTTTTGGGCCAGAAATTTG+CGG | + | chr2_2:17687135-17687154 | None:intergenic | 40.0% |
| ! | GCCCAAAAAGCTCTAGTATA+AGG | - | chr2_2:17687145-17687164 | Msa0241740:intron | 40.0% |
| AAATAGCAGCCATAGCATAG+TGG | - | chr2_2:17687244-17687263 | Msa0241740:intron | 40.0% | |
| TGATGGGATCAGATCAGAAA+CGG | - | chr2_2:17687377-17687396 | Msa0241740:intron | 40.0% | |
| TTGCAAATTATCCCCTCAAG+TGG | - | chr2_2:17687404-17687423 | Msa0241740:intron | 40.0% | |
| GAGATGTTCGAACGTAATCA+AGG | - | chr2_2:17687438-17687457 | Msa0241740:intron | 40.0% | |
| GACACTTTACCACTGTTGAT+CGG | - | chr2_2:17687501-17687520 | Msa0241740:intron | 40.0% | |
| TTCAAAAAGCCGATCAACAG+TGG | + | chr2_2:17687513-17687532 | None:intergenic | 40.0% | |
| !! | CGGCTTTTTGAAAAAGGATG+AGG | - | chr2_2:17687521-17687540 | Msa0241740:intron | 40.0% |
| AATACTCGCATCTATCACCT+AGG | - | chr2_2:17687599-17687618 | Msa0241740:CDS | 40.0% | |
| ATACTCGCATCTATCACCTA+GGG | - | chr2_2:17687600-17687619 | Msa0241740:CDS | 40.0% | |
| TTTGTTCTATTCTGCACCCT+AGG | + | chr2_2:17687619-17687638 | None:intergenic | 40.0% | |
| ! | TCTAGCTTGAATGAACTTGG+TGG | - | chr2_2:17687876-17687895 | Msa0241740:intron | 40.0% |
| ATATGGTCATATGGAGGTCA+TGG | - | chr2_2:17688292-17688311 | Msa0241740:intron | 40.0% | |
| TATGGTCATATGGAGGTCAT+GGG | - | chr2_2:17688293-17688312 | Msa0241740:intron | 40.0% | |
| TAGGTGAGATCATCTTAGTG+GGG | + | chr2_2:17688363-17688382 | None:intergenic | 40.0% | |
| CAGCAAGTGATTGTTACTCT+AGG | + | chr2_2:17688401-17688420 | None:intergenic | 40.0% | |
| !! | AAACTAGCTCTGCTTCATGA+TGG | + | chr2_2:17688606-17688625 | None:intergenic | 40.0% |
| GTATTCTGTAGGACCATTAC+TGG | - | chr2_2:17688979-17688998 | Msa0241740:intron | 40.0% | |
| ! | CTGAAGTATCTTACATCTCG+TGG | - | chr2_2:17689038-17689057 | Msa0241740:intron | 40.0% |
| ATCTCGTGGAAAACTGATCA+AGG | - | chr2_2:17689052-17689071 | Msa0241740:intron | 40.0% | |
| ! | TAGGCTTTATAAGCTCTGCT+TGG | + | chr2_2:17689224-17689243 | None:intergenic | 40.0% |
| AAGCAGAGCTTATAAAGCCT+AGG | - | chr2_2:17689223-17689242 | Msa0241740:intron | 40.0% | |
| CTCCAGCAAACCAATTTCTA+CGG | + | chr2_2:17689258-17689277 | None:intergenic | 40.0% | |
| TCAGGCCAAAAAACACTAGA+TGG | - | chr2_2:17689283-17689302 | Msa0241740:intron | 40.0% | |
| TATGGTGGTCCAATAATGTC+TGG | + | chr2_2:17689322-17689341 | None:intergenic | 40.0% | |
| !! | ACCAAGTTTGTTAGTGTTGG+GGG | - | chr2_2:17689352-17689371 | Msa0241740:intron | 40.0% |
| TGTGTAATGTGTAGGGTTTG+GGG | + | chr2_2:17689469-17689488 | None:intergenic | 40.0% | |
| CCAGAGTTTGTGTAATGTGT+AGG | + | chr2_2:17689477-17689496 | None:intergenic | 40.0% | |
| CCTACACATTACACAAACTC+TGG | - | chr2_2:17689474-17689493 | Msa0241740:intron | 40.0% | |
| !! | AGTGGAAAATGGGCTAGATA+TGG | - | chr2_2:17689533-17689552 | Msa0241740:CDS | 40.0% |
| GAGAGATGGTGAAACGAATA+AGG | - | chr2_2:17689597-17689616 | Msa0241740:CDS | 40.0% | |
| !! | TATTTGAAATAGGGGTGCTG+TGG | - | chr2_2:17689715-17689734 | Msa0241740:intron | 40.0% |
| ! | TTATATACAGCCGTTGGTTG+TGG | - | chr2_2:17689779-17689798 | Msa0241740:intron | 40.0% |
| ! | TATATACAGCCGTTGGTTGT+GGG | - | chr2_2:17689780-17689799 | Msa0241740:intron | 40.0% |
| ! | TTATATTTCAGGTGAAGCGC+AGG | - | chr2_2:17690007-17690026 | Msa0241740:intron | 40.0% |
| TTATTGGAAGGGAGGCAAAA+AGG | - | chr2_2:17690087-17690106 | Msa0241740:intron | 40.0% | |
| TTCTAAATCGATCTCGGACT+TGG | + | chr2_2:17690151-17690170 | None:intergenic | 40.0% | |
| AGGAGAAAAACACCCAAAGA+CGG | - | chr2_2:17690346-17690365 | Msa0241740:intron | 40.0% | |
| AGCCAAGATTTACCGTCTTT+GGG | + | chr2_2:17690361-17690380 | None:intergenic | 40.0% | |
| AAGCCAAGATTTACCGTCTT+TGG | + | chr2_2:17690362-17690381 | None:intergenic | 40.0% | |
| !!! | AGTTTTAGGCTCAGTCAAGG+TGG | - | chr2_2:17686531-17686550 | Msa0241740:CDS | 45.0% |
| !! | GTTTTAGGCTCAGTCAAGGT+GGG | - | chr2_2:17686532-17686551 | Msa0241740:CDS | 45.0% |
| AGCTGGAGTTATCAAGCATG+GGG | - | chr2_2:17686738-17686757 | Msa0241740:intron | 45.0% | |
| TAAATGGCGTACGATCCTCA+AGG | - | chr2_2:17686765-17686784 | Msa0241740:intron | 45.0% | |
| ! | GGTTTCGTTATGTGGGTTGT+TGG | - | chr2_2:17686919-17686938 | Msa0241740:intron | 45.0% |
| ! | CGTTATGTGGGTTGTTGGAT+AGG | - | chr2_2:17686924-17686943 | Msa0241740:intron | 45.0% |
| ATGGCGAAATTTGAGCGTGA+TGG | - | chr2_2:17686951-17686970 | Msa0241740:intron | 45.0% | |
| AATTTGAGCGTGATGGCAAG+TGG | - | chr2_2:17686958-17686977 | Msa0241740:intron | 45.0% | |
| AGCCAAAGGGAGCAATGAAA+AGG | - | chr2_2:17686998-17687017 | Msa0241740:intron | 45.0% | |
| GCCAAAGGGAGCAATGAAAA+GGG | - | chr2_2:17686999-17687018 | Msa0241740:intron | 45.0% | |
| ! | ACCCTTTTCATTGCTCCCTT+TGG | + | chr2_2:17687003-17687022 | None:intergenic | 45.0% |
| TTATCAGGCACCAATACACG+AGG | - | chr2_2:17687026-17687045 | Msa0241740:intron | 45.0% | |
| ! | GTCACTTTAGCAACCACACA+AGG | - | chr2_2:17687477-17687496 | Msa0241740:intron | 45.0% |
| ! | TGGTAAAGTGTCACCTTGTG+TGG | + | chr2_2:17687493-17687512 | None:intergenic | 45.0% |
| TACACCAGCAAGCATATCAG+AGG | + | chr2_2:17688323-17688342 | None:intergenic | 45.0% | |
| ! | CTGATATGCTTGCTGGTGTA+AGG | - | chr2_2:17688323-17688342 | Msa0241740:intron | 45.0% |
| AGATGATCTCACCTATTGGG+AGG | - | chr2_2:17688368-17688387 | Msa0241740:intron | 45.0% | |
| TAACCAGGTTTCAGAAGGCA+TGG | + | chr2_2:17688737-17688756 | None:intergenic | 45.0% | |
| CACAGTAACCAGGTTTCAGA+AGG | + | chr2_2:17688742-17688761 | None:intergenic | 45.0% | |
| AACCTGGTTACTGTGTCTTG+TGG | - | chr2_2:17688747-17688766 | Msa0241740:CDS | 45.0% | |
| AACCACAAGACACAGTAACC+AGG | + | chr2_2:17688752-17688771 | None:intergenic | 45.0% | |
| !!! | AGCAGCTTTTTGAAGTCAGC+AGG | + | chr2_2:17689008-17689027 | None:intergenic | 45.0% |
| GCAATCCTCACCGTAGAAAT+TGG | - | chr2_2:17689245-17689264 | Msa0241740:intron | 45.0% | |
| GCAAACCAATTTCTACGGTG+AGG | + | chr2_2:17689253-17689272 | None:intergenic | 45.0% | |
| !! | CACCGTAGAAATTGGTTTGC+TGG | - | chr2_2:17689253-17689272 | Msa0241740:intron | 45.0% |
| !! | TGGTTTGCTGGAGTTGAATC+AGG | - | chr2_2:17689265-17689284 | Msa0241740:intron | 45.0% |
| ACCCCCAACACTAACAAACT+TGG | + | chr2_2:17689356-17689375 | None:intergenic | 45.0% | |
| ACTCACATTGGCGTGAGATA+AGG | - | chr2_2:17689406-17689425 | Msa0241740:intron | 45.0% | |
| CTAATGTCGCGGCAAATCTT+AGG | - | chr2_2:17689443-17689462 | Msa0241740:intron | 45.0% | |
| TGAGTTCGTGGAGTGGAAAA+TGG | - | chr2_2:17689522-17689541 | Msa0241740:CDS | 45.0% | |
| GAGTTCGTGGAGTGGAAAAT+GGG | - | chr2_2:17689523-17689542 | Msa0241740:CDS | 45.0% | |
| AATCTCAGGACAAGGGGATT+TGG | - | chr2_2:17689575-17689594 | Msa0241740:CDS | 45.0% | |
| CTGTCTGAATATGCTGGAGT+AGG | + | chr2_2:17690045-17690064 | None:intergenic | 45.0% | |
| ACTCCAGCATATTCAGACAG+AGG | - | chr2_2:17690045-17690064 | Msa0241740:intron | 45.0% | |
| CTTCCTCTGTCTGAATATGC+TGG | + | chr2_2:17690051-17690070 | None:intergenic | 45.0% | |
| ! | AATCGATCTCGGACTTGGTA+TGG | + | chr2_2:17690146-17690165 | None:intergenic | 45.0% |
| AGCTGAAAGGAAAAGGCTGA+AGG | - | chr2_2:17690326-17690345 | Msa0241740:intron | 45.0% | |
| CACCCAAAGACGGTAAATCT+TGG | - | chr2_2:17690356-17690375 | Msa0241740:intron | 45.0% | |
| TTCCATAAAACCTGCTTGCG+AGG | - | chr2_2:17690485-17690504 | Msa0241740:five_prime_UTR | 45.0% | |
| TCCATAAAACCTGCTTGCGA+GGG | - | chr2_2:17690486-17690505 | Msa0241740:five_prime_UTR | 45.0% | |
| !! | CAAAAATAAAATAAAATAAT+TGG | + | chr2_2:17687177-17687196 | None:intergenic | 5.0% |
| !!! | TTATTTTTGTTTTTTTAATA+CGG | - | chr2_2:17687188-17687207 | Msa0241740:intron | 5.0% |
| ACCGCATCACAGAATTGCGT+CGG | - | chr2_2:17686267-17686286 | Msa0241740:exon | 50.0% | |
| TCCGACGCAATTCTGTGATG+CGG | + | chr2_2:17686271-17686290 | None:intergenic | 50.0% | |
| GAGGAATCCGCACTTAAAGC+TGG | - | chr2_2:17686721-17686740 | Msa0241740:intron | 50.0% | |
| TGGAGTTATCAAGCATGGGG+TGG | - | chr2_2:17686741-17686760 | Msa0241740:intron | 50.0% | |
| GGAGTTATCAAGCATGGGGT+GGG | - | chr2_2:17686742-17686761 | Msa0241740:intron | 50.0% | |
| TCAAGCATGGGGTGGGTAAA+TGG | - | chr2_2:17686749-17686768 | Msa0241740:intron | 50.0% | |
| TGAATCCTGACGCAAGAGTG+AGG | - | chr2_2:17688249-17688268 | Msa0241740:intron | 50.0% | |
| ACAGCCTCTGATATGCTTGC+TGG | - | chr2_2:17688316-17688335 | Msa0241740:intron | 50.0% | |
| !! | ACTCCATGCCTTCTGAAACC+TGG | - | chr2_2:17688731-17688750 | Msa0241740:CDS | 50.0% |
| TTCTACGGTGAGGATTGCCT+AGG | + | chr2_2:17689243-17689262 | None:intergenic | 50.0% | |
| TGACTGTAGGTCTGAGTTCG+TGG | - | chr2_2:17689510-17689529 | Msa0241740:CDS | 50.0% | |
| GACAAGGGGATTTGGAGAGA+TGG | - | chr2_2:17689583-17689602 | Msa0241740:CDS | 50.0% | |
| TTCAGGTGAAGCGCAGGTAT+AGG | - | chr2_2:17690013-17690032 | Msa0241740:intron | 50.0% | |
| AAGGTCCATGTCTGCACAAG+AGG | - | chr2_2:17690182-17690201 | Msa0241740:intron | 50.0% | |
| TGTATTATGCCCTCGCAAGC+AGG | + | chr2_2:17690498-17690517 | None:intergenic | 50.0% | |
| ATATTCCGATCTCCCTCGCG+TGG | - | chr2_2:17686202-17686221 | Msa0241740:three_prime_UTR | 55.0% | |
| GTGATGCGGTGCCCTTTGAA+GGG | + | chr2_2:17686257-17686276 | None:intergenic | 55.0% | |
| TGTGATGCGGTGCCCTTTGA+AGG | + | chr2_2:17686258-17686277 | None:intergenic | 55.0% | |
| AGAATTGCGTCGGAGCTGAG+CGG | - | chr2_2:17686277-17686296 | Msa0241740:CDS | 55.0% | |
| TGAGCGTGATGGCAAGTGGA+TGG | - | chr2_2:17686962-17686981 | Msa0241740:intron | 55.0% | |
| GAGCGTGATGGCAAGTGGAT+GGG | - | chr2_2:17686963-17686982 | Msa0241740:intron | 55.0% | |
| GCTTCGAGGGAGAAGCCAAA+GGG | - | chr2_2:17686985-17687004 | Msa0241740:intron | 55.0% | |
| ATCCTGACGCAAGAGTGAGG+TGG | - | chr2_2:17688252-17688271 | Msa0241740:intron | 55.0% | |
| TAGGGCACAAGCCTCCCAAT+AGG | + | chr2_2:17688382-17688401 | None:intergenic | 55.0% | |
| TGCAAGACACTCACACGCAC+AGG | + | chr2_2:17688708-17688727 | None:intergenic | 55.0% | |
| AGTCAGCAGGTGCCCAGTAA+TGG | + | chr2_2:17688995-17689014 | None:intergenic | 55.0% | |
| ! | TAGTGTTGGGGGTGATGAGC+AGG | - | chr2_2:17689363-17689382 | Msa0241740:intron | 55.0% |
| GTAGGTCTGAGTTCGTGGAG+TGG | - | chr2_2:17689515-17689534 | Msa0241740:CDS | 55.0% | |
| ! | ACAGCCGTTGGTTGTGGGTT+TGG | - | chr2_2:17689785-17689804 | Msa0241740:intron | 55.0% |
| ! | CAGCCGTTGGTTGTGGGTTT+GGG | - | chr2_2:17689786-17689805 | Msa0241740:intron | 55.0% |
| CAGCCCAAACCCACAACCAA+CGG | + | chr2_2:17689792-17689811 | None:intergenic | 55.0% | |
| AACTGCTCGAGCAGCACATG+CGG | + | chr2_2:17690211-17690230 | None:intergenic | 55.0% | |
| TGCTCGAGCAGTTGCTGAAG+CGG | - | chr2_2:17690218-17690237 | Msa0241740:intron | 55.0% | |
| GGAGGCTGAAGAGGCAACAA+AGG | - | chr2_2:17690254-17690273 | Msa0241740:intron | 55.0% | |
| GGCTGAAGAGGCAACAAAGG+AGG | - | chr2_2:17690257-17690276 | Msa0241740:intron | 55.0% | |
| AGAGGCAACAAAGGAGGCAG+AGG | - | chr2_2:17690263-17690282 | Msa0241740:intron | 55.0% | |
| AGAAGCGGAGGCAGATGCAA+TGG | - | chr2_2:17690290-17690309 | Msa0241740:intron | 55.0% | |
| ! | GCCCTCGCAAGCAGGTTTTA+TGG | + | chr2_2:17690490-17690509 | None:intergenic | 55.0% |
| CCTCACCGCTGCGTTGTGAT+CGG | + | chr2_2:17686146-17686165 | None:intergenic | 60.0% | |
| CGCCAACGAGGAAGCGAATC+CGG | - | chr2_2:17686228-17686247 | Msa0241740:three_prime_UTR | 60.0% | |
| GAATCCGGCCGCCCTTCAAA+GGG | - | chr2_2:17686243-17686262 | Msa0241740:three_prime_UTR | 60.0% | |
| ! | ATGCGGTGCCCTTTGAAGGG+CGG | + | chr2_2:17686254-17686273 | None:intergenic | 60.0% |
| ! | TGGCAAGTGGATGGGCTTCG+AGG | - | chr2_2:17686971-17686990 | Msa0241740:intron | 60.0% |
| ! | GGCAAGTGGATGGGCTTCGA+GGG | - | chr2_2:17686972-17686991 | Msa0241740:intron | 60.0% |
| GGCTTCGAGGGAGAAGCCAA+AGG | - | chr2_2:17686984-17687003 | Msa0241740:intron | 60.0% | |
| AGCCACCTCACTCTTGCGTC+AGG | + | chr2_2:17688257-17688276 | None:intergenic | 60.0% | |
| GGCTGCCTCTTGTGCAGACA+TGG | + | chr2_2:17690190-17690209 | None:intergenic | 60.0% | |
| TGCTGAAGCGGAAGCCCTCA+TGG | - | chr2_2:17690230-17690249 | Msa0241740:intron | 60.0% | |
| TGAAGCGGAAGCCCTCATGG+CGG | - | chr2_2:17690233-17690252 | Msa0241740:intron | 60.0% | |
| CTCTTCAGCCTCCGCCATGA+GGG | + | chr2_2:17690247-17690266 | None:intergenic | 60.0% | |
| !! | CAGCGCCGATCACAACGCAG+CGG | - | chr2_2:17686138-17686157 | Msa0241740:three_prime_UTR | 65.0% |
| CCGATCACAACGCAGCGGTG+AGG | - | chr2_2:17686143-17686162 | Msa0241740:three_prime_UTR | 65.0% | |
| TTCCGATCTCCCTCGCGTGG+TGG | - | chr2_2:17686205-17686224 | Msa0241740:three_prime_UTR | 65.0% | |
| GGCCGGATTCGCTTCCTCGT+TGG | + | chr2_2:17686233-17686252 | None:intergenic | 65.0% | |
| CGAATCCGGCCGCCCTTCAA+AGG | - | chr2_2:17686242-17686261 | Msa0241740:three_prime_UTR | 65.0% | |
| CCTCTTCAGCCTCCGCCATG+AGG | + | chr2_2:17690248-17690267 | None:intergenic | 65.0% | |
| ! | CCTCATGGCGGAGGCTGAAG+AGG | - | chr2_2:17690245-17690264 | Msa0241740:intron | 65.0% |
| GGAGGCAGAGGCTGCAGAAG+CGG | - | chr2_2:17690275-17690294 | Msa0241740:intron | 65.0% | |
| CGCCACCACGCGAGGGAGAT+CGG | + | chr2_2:17686210-17686229 | None:intergenic | 70.0% | |
| TCGTTGGCGCCACCACGCGA+GGG | + | chr2_2:17686217-17686236 | None:intergenic | 70.0% | |
| ! | GGTGCCCTTTGAAGGGCGGC+CGG | + | chr2_2:17686250-17686269 | None:intergenic | 70.0% |
| AGCGGAAGCCCTCATGGCGG+AGG | - | chr2_2:17690236-17690255 | Msa0241740:intron | 70.0% | |
| GGCAGAGGCTGCAGAAGCGG+AGG | - | chr2_2:17690278-17690297 | Msa0241740:intron | 70.0% | |
| CTCGTTGGCGCCACCACGCG+AGG | + | chr2_2:17686218-17686237 | None:intergenic | 75.0% | |
| ! | CTCGCGTGGTGGCGCCAACG+AGG | - | chr2_2:17686216-17686235 | Msa0241740:three_prime_UTR | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 17686026 | 17690620 | 17686026 | ID=Msa0241740;Name=Msa0241740 |
| chr2_2 | mRNA | 17686026 | 17690620 | 17686026 | ID=Msa0241740-mRNA-1;Parent=Msa0241740;Name=Msa0241740-mRNA-1;_AED=0.35;_eAED=0.35;_QI=167|1|1|1|0.6|0.66|6|249|297 |
| chr2_2 | exon | 17686026 | 17686628 | 17686026 | ID=Msa0241740-mRNA-1:exon:7234;Parent=Msa0241740-mRNA-1 |
| chr2_2 | exon | 17687573 | 17687656 | 17687573 | ID=Msa0241740-mRNA-1:exon:7233;Parent=Msa0241740-mRNA-1 |
| chr2_2 | exon | 17688714 | 17688798 | 17688714 | ID=Msa0241740-mRNA-1:exon:7232;Parent=Msa0241740-mRNA-1 |
| chr2_2 | exon | 17689480 | 17689700 | 17689480 | ID=Msa0241740-mRNA-1:exon:7231;Parent=Msa0241740-mRNA-1 |
| chr2_2 | exon | 17689809 | 17689986 | 17689809 | ID=Msa0241740-mRNA-1:exon:7230;Parent=Msa0241740-mRNA-1 |
| chr2_2 | exon | 17690482 | 17690620 | 17690482 | ID=Msa0241740-mRNA-1:exon:7229;Parent=Msa0241740-mRNA-1 |
| chr2_2 | five_prime_UTR | 17690482 | 17690620 | 17690482 | ID=Msa0241740-mRNA-1:five_prime_utr;Parent=Msa0241740-mRNA-1 |
| chr2_2 | five_prime_UTR | 17689959 | 17689986 | 17689959 | ID=Msa0241740-mRNA-1:five_prime_utr;Parent=Msa0241740-mRNA-1 |
| chr2_2 | CDS | 17689809 | 17689958 | 17689809 | ID=Msa0241740-mRNA-1:cds;Parent=Msa0241740-mRNA-1 |
| chr2_2 | CDS | 17689480 | 17689700 | 17689480 | ID=Msa0241740-mRNA-1:cds;Parent=Msa0241740-mRNA-1 |
| chr2_2 | CDS | 17688714 | 17688798 | 17688714 | ID=Msa0241740-mRNA-1:cds;Parent=Msa0241740-mRNA-1 |
| chr2_2 | CDS | 17687573 | 17687656 | 17687573 | ID=Msa0241740-mRNA-1:cds;Parent=Msa0241740-mRNA-1 |
| chr2_2 | CDS | 17686275 | 17686628 | 17686275 | ID=Msa0241740-mRNA-1:cds;Parent=Msa0241740-mRNA-1 |
| chr2_2 | three_prime_UTR | 17686026 | 17686274 | 17686026 | ID=Msa0241740-mRNA-1:three_prime_utr;Parent=Msa0241740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
