AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1203830

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1203830 MtrunA17_Chr8g0375041 81.720 279 28 3 1 279 1 256 3.00e-165 458
Msa1203830 MtrunA17_Chr5g0402291 45.993 287 105 7 1 268 1 256 4.23e-71 220
Msa1203830 MtrunA17_Chr3g0134031 36.704 267 114 6 2 216 17 280 1.96e-48 164
Msa1203830 MtrunA17_Chr7g0257331 48.795 166 79 1 3 168 16 175 2.23e-47 158
Msa1203830 MtrunA17_Chr5g0397881 43.719 199 83 3 2 171 17 215 3.19e-47 161
Msa1203830 MtrunA17_Chr5g0441531 42.857 182 100 2 2 179 18 199 5.98e-45 152
Msa1203830 MtrunA17_Chr1g0203601 43.000 200 98 3 2 185 11 210 2.67e-42 147
Msa1203830 MtrunA17_Chr6g0472421 40.500 200 89 1 2 171 26 225 1.55e-41 145
Msa1203830 MtrunA17_Chr5g0410881 41.176 187 102 1 6 192 29 207 3.36e-41 148
Msa1203830 MtrunA17_Chr4g0039891 41.667 192 97 4 9 197 12 191 5.21e-41 147
Msa1203830 MtrunA17_Chr7g0260331 61.458 96 37 0 5 100 45 140 8.33e-37 134
Msa1203830 MtrunA17_Chr6g0467041 60.215 93 37 0 8 100 21 113 1.14e-36 132
Msa1203830 MtrunA17_Chr1g0204741 38.172 186 99 3 7 192 38 207 5.38e-36 131
Msa1203830 MtrunA17_Chr3g0135831 37.879 198 98 5 5 197 42 219 5.32e-35 129
Msa1203830 MtrunA17_Chr1g0185131 55.963 109 47 1 5 112 28 136 5.43e-35 129
Msa1203830 MtrunA17_Chr6g0485571 56.000 100 44 0 1 100 3 102 7.81e-35 128
Msa1203830 MtrunA17_Chr8g0392001 58.416 101 41 1 7 106 20 120 1.22e-34 128
Msa1203830 MtrunA17_Chr8g0379701 42.282 149 69 2 9 156 12 144 1.72e-34 128
Msa1203830 MtrunA17_Chr2g0284481 39.884 173 87 3 7 175 13 172 1.07e-33 126
Msa1203830 MtrunA17_Chr4g0071051 56.842 95 41 0 5 99 97 191 8.75e-33 124
Msa1203830 MtrunA17_Chr4g0047421 39.375 160 89 2 6 161 30 185 3.99e-32 117
Msa1203830 MtrunA17_Chr8g0378061 58.242 91 38 0 10 100 23 113 4.09e-32 123
Msa1203830 MtrunA17_Chr2g0330821 53.191 94 44 0 7 100 77 170 5.50e-29 113
Msa1203830 MtrunA17_Chr1g0179321 60.317 63 25 0 6 68 46 108 7.60e-24 93.2
Msa1203830 MtrunA17_Chr4g0023771 56.667 60 26 0 7 66 13 72 2.38e-18 78.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1203830 AT4G36990.1 43.411 258 119 5 2 247 7 249 5.51e-56 182
Msa1203830 AT1G46264.1 35.836 293 132 7 6 247 31 318 5.12e-46 158
Msa1203830 AT2G41690.1 45.810 179 85 3 6 172 37 215 1.78e-43 148
Msa1203830 AT4G11660.1 41.500 200 77 2 2 161 52 251 2.04e-42 149
Msa1203830 AT3G02990.1 42.105 190 93 4 6 192 20 195 1.29e-41 149
Msa1203830 AT1G32330.2 43.316 187 100 3 6 192 34 214 8.44e-41 147
Msa1203830 AT1G32330.1 43.316 187 100 3 6 192 34 214 9.19e-41 147
Msa1203830 AT5G62020.1 40.625 192 92 4 2 171 16 207 2.45e-40 142
Msa1203830 AT5G16820.1 41.327 196 87 5 6 192 24 200 3.49e-40 145
Msa1203830 AT5G16820.2 41.327 196 87 5 6 192 24 200 3.49e-40 145
Msa1203830 AT4G17750.1 36.842 228 134 3 7 230 50 271 7.23e-39 142
Msa1203830 AT3G51910.1 52.101 119 48 1 6 124 26 135 4.47e-37 132
Msa1203830 AT3G24520.1 42.169 166 75 4 8 171 16 162 6.91e-37 134
Msa1203830 AT2G26150.1 38.624 189 101 1 9 197 44 217 8.84e-37 134
Msa1203830 AT2G26150.4 38.624 189 101 1 9 197 44 217 8.84e-37 134
Msa1203830 AT3G22830.1 59.375 96 39 0 6 101 58 153 6.37e-35 130
Msa1203830 AT5G43840.1 38.122 181 95 2 3 183 13 176 1.96e-34 126
Msa1203830 AT3G63350.1 36.898 187 99 1 7 193 26 193 3.62e-34 125
Msa1203830 AT5G03720.2 60.638 94 37 0 8 101 54 147 6.68e-34 127
Msa1203830 AT5G03720.1 60.638 94 37 0 8 101 54 147 6.68e-34 127
Msa1203830 AT4G13980.1 41.718 163 74 2 10 172 24 165 1.09e-33 127
Msa1203830 AT1G67970.1 43.125 160 75 3 7 165 17 161 1.12e-32 123
Msa1203830 AT5G54070.1 55.435 92 41 0 8 99 70 161 2.66e-32 121
Msa1203830 AT5G45710.3 43.137 153 70 2 6 157 10 146 5.06e-31 118
Msa1203830 AT5G45710.1 43.137 153 70 2 6 157 10 146 5.06e-31 118
Msa1203830 AT4G18880.1 35.922 206 103 4 6 209 12 190 1.57e-29 115
Msa1203830 AT4G18870.1 39.560 91 55 0 6 96 143 233 5.29e-18 82.4
Msa1203830 AT4G18870.1 39.785 93 51 3 6 96 10 99 2.45e-14 72.0
Msa1203830 AT1G77570.1 37.931 87 51 2 10 93 27 113 7.71e-12 62.4

Find 105 sgRNAs with CRISPR-Local

Find 259 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAATTCTACTTTGTTTATT+TGG 0.152161 8_1:+58975347 None:intergenic
TGTATTTATGTATTTATAAA+AGG 0.180298 8_1:+58975399 None:intergenic
AGGAAAATAAATAAAGAAAA+AGG 0.187830 8_1:+58975492 None:intergenic
CTCTGGTGCTGCTGAAGATA+TGG 0.236484 8_1:-58971352 Msa1203830:CDS
TTGTTGTGCTTGAAATATTT+TGG 0.239756 8_1:+58975143 None:intergenic
TTCCATAAGCTTTGGATTCA+TGG 0.249690 8_1:-58975725 Msa1203830:five_prime_UTR
ATTTCGTAGTTGTTTGGTTT+TGG 0.287663 8_1:-58970780 Msa1203830:three_prime_UTR
TCACAAATGATGTGATTTCT+TGG 0.292322 8_1:-58975226 Msa1203830:CDS
ATCCATGAATCCAAAGCTTA+TGG 0.293713 8_1:+58975723 None:intergenic
CGAGAACAAAAGACTCAAAA+TGG 0.305997 8_1:-58971286 Msa1203830:CDS
GTGATTTCTTGGGGTGAAAA+TGG 0.307729 8_1:-58975215 Msa1203830:CDS
ATTTGTCGGCAGCAGCTTTC+CGG 0.311222 8_1:+58971499 None:intergenic
CCCCTCTCTTAAAATTCTCT+TGG 0.321950 8_1:+58971466 None:intergenic
AAATCATAAAACAATACTTC+TGG 0.327276 8_1:+58975828 None:intergenic
TTTCAATTTCTCAGGGGTTC+CGG 0.336163 8_1:-58971518 Msa1203830:intron
TGTTCTCTGTTTAGAAGTTA+TGG 0.336664 8_1:-58975771 Msa1203830:five_prime_UTR
CACAAATGATGTGATTTCTT+GGG 0.344507 8_1:-58975225 Msa1203830:CDS
GAAAGGGTATAAGACTGTTT+GGG 0.345034 8_1:-58971017 Msa1203830:CDS
GTATAAGACTGTTTGGGGTT+TGG 0.352030 8_1:-58971011 Msa1203830:CDS
TTCAGGGCGGTCTCAACATC+GGG 0.365918 8_1:-58971134 Msa1203830:CDS
AGAATTGCTTGCTTATCTTC+AGG 0.367247 8_1:-58971214 Msa1203830:CDS
AGAATTGCTTGCTTATCTTC+AGG 0.372663 8_1:-58971151 Msa1203830:CDS
TCATTGTTGGCACCATCAAT+TGG 0.373020 8_1:+58970910 None:intergenic
TTATTCATTTCCATAAGCTT+TGG 0.373179 8_1:-58975733 Msa1203830:five_prime_UTR
GGAAAGGGTATAAGACTGTT+TGG 0.388092 8_1:-58971018 Msa1203830:CDS
ATACAAATTTCGTAGTTGTT+TGG 0.391325 8_1:-58970786 Msa1203830:three_prime_UTR
GGAAAGCTGCTGCCGACAAA+TGG 0.392444 8_1:-58971497 Msa1203830:CDS
TCTCTTGTGGCAGCTACCCT+TGG 0.404436 8_1:+58970945 None:intergenic
GTCTTCCGACGCTTGATTGT+CGG 0.414985 8_1:+58971429 None:intergenic
TTCAGGGTGATCTCAACATC+GGG 0.437971 8_1:-58971197 Msa1203830:CDS
GTCTGATCGGTCCACCGATC+CGG 0.438684 8_1:+58971317 None:intergenic
AGGATCATCAATCATCTCAT+AGG 0.440358 8_1:+58975250 None:intergenic
CCCGCTGCTGTAAGATCTGT+TGG 0.442824 8_1:-58971399 Msa1203830:CDS
CCCTCTCTTAAAATTCTCTT+GGG 0.443216 8_1:+58971467 None:intergenic
GAATTGCTTGCTTATCTTCA+GGG 0.443640 8_1:-58971213 Msa1203830:CDS
GAATTGCTTGCTTATCTTCA+GGG 0.444946 8_1:-58971150 Msa1203830:CDS
CAAAGTAGAATTTGTGAAGT+AGG 0.450996 8_1:-58975338 Msa1203830:five_prime_UTR
AAGTAGGTGAAGGGTAGATC+GGG 0.453594 8_1:-58975322 Msa1203830:five_prime_UTR
ATCATCATCCGTATCATGGC+TGG 0.456429 8_1:+58971068 None:intergenic
AACAGCCTTGAACTCATTGT+TGG 0.460694 8_1:+58970897 None:intergenic
CATTGTTGGCACCATCAATT+GGG 0.461669 8_1:+58970911 None:intergenic
GAAGTAGGTGAAGGGTAGAT+CGG 0.467714 8_1:-58975323 Msa1203830:five_prime_UTR
ATCAATCATCTCATAGGTCT+TGG 0.469811 8_1:+58975256 None:intergenic
GGGCGTGAAGACCCAATTGA+TGG 0.486085 8_1:-58970922 Msa1203830:CDS
TCGTTCCTTTGCCAAGGATA+CGG 0.487676 8_1:+58971097 None:intergenic
GATGAAATTAACCGTATCCT+TGG 0.490434 8_1:-58971108 Msa1203830:CDS
GAAAGCTGCTGCCGACAAAT+GGG 0.492919 8_1:-58971496 Msa1203830:CDS
CATCATCATCATCCGTATCA+TGG 0.496813 8_1:+58971064 None:intergenic
TTGGGCGAATTCCCATTTGT+CGG 0.497343 8_1:+58971485 None:intergenic
TCTGGTGCTGCTGAAGATAT+GGG 0.499437 8_1:-58971351 Msa1203830:CDS
CCAACAGATCTTACAGCAGC+GGG 0.502479 8_1:+58971399 None:intergenic
GTACGTCGTGACTGCGGAAA+GGG 0.505755 8_1:-58971033 Msa1203830:CDS
GCTGTAAGATCTGTTGGAGT+TGG 0.513039 8_1:-58971393 Msa1203830:CDS
GAAGAAAATGTCTAAGAGGT+TGG 0.514254 8_1:-58975297 Msa1203830:exon
GTTTGGCTGAAGGAAGAAGA+GGG 0.514660 8_1:-58970994 Msa1203830:CDS
TGAGTTCAAGGCTGTTGTCT+AGG 0.515335 8_1:-58970890 Msa1203830:exon
CTTCACGAGTGCCAGTTCAC+TGG 0.517956 8_1:+58971248 None:intergenic
TAAGATCTGTTGGAGTTGGC+GGG 0.518928 8_1:-58971389 Msa1203830:CDS
GGGAATTCACCTTCGCACTC+TGG 0.523578 8_1:-58971369 Msa1203830:CDS
ACCCATTCGTTCCTTTGCCA+AGG 0.525178 8_1:+58971091 None:intergenic
GGTCTTCACGCCCTCTCTTG+TGG 0.525936 8_1:+58970932 None:intergenic
GTAAGATCTGTTGGAGTTGG+CGG 0.525989 8_1:-58971390 Msa1203830:CDS
GAATTTGTGAAGTAGGTGAA+GGG 0.527424 8_1:-58975331 Msa1203830:five_prime_UTR
ATCCTTGGCAAAGGAACGAA+TGG 0.527436 8_1:-58971093 Msa1203830:CDS
CTTCAGGGCGGTCTCAACAT+CGG 0.528747 8_1:-58971135 Msa1203830:CDS
AGAATTTGTGAAGTAGGTGA+AGG 0.530681 8_1:-58975332 Msa1203830:five_prime_UTR
ACTGTTTGGGGTTTGGCTGA+AGG 0.533700 8_1:-58971004 Msa1203830:CDS
AGGGTAGCTGCCACAAGAGA+GGG 0.548965 8_1:-58970942 Msa1203830:CDS
AGAAGAGGGGAAAGACAAGG+TGG 0.549839 8_1:-58970980 Msa1203830:CDS
TCTTCATTGCCACAAAAGCT+AGG 0.550855 8_1:+58970678 None:intergenic
GAATGGGTCCAGCCATGATA+CGG 0.552219 8_1:-58971076 Msa1203830:CDS
GGGATCAACTTCGACCGGAT+CGG 0.553641 8_1:-58971331 Msa1203830:CDS
GGAAGAAGAAAATGTCTAAG+AGG 0.554539 8_1:-58975301 Msa1203830:exon
CTTGATTGTCGGAAGCAGCT+CGG 0.555478 8_1:+58971440 None:intergenic
TGGTGCCAACAATGAGTTCA+AGG 0.555667 8_1:-58970902 Msa1203830:CDS
TCCAACAGATCTTACAGCAG+CGG 0.556507 8_1:+58971398 None:intergenic
GTTGTCTAGGACATGTGGTA+AGG 0.558034 8_1:-58970877 Msa1203830:exon
AAGGGTAGCTGCCACAAGAG+AGG 0.563776 8_1:-58970943 Msa1203830:CDS
GATATGGGATCAACTTCGAC+CGG 0.569648 8_1:-58971336 Msa1203830:CDS
TCCTTGGCAAAGGAACGAAT+GGG 0.573236 8_1:-58971092 Msa1203830:CDS
GGAAGAAGAGGGGAAAGACA+AGG 0.573733 8_1:-58970983 Msa1203830:CDS
AAAGGGTATAAGACTGTTTG+GGG 0.582432 8_1:-58971016 Msa1203830:CDS
ATCAACTTCGACCGGATCGG+TGG 0.586784 8_1:-58971328 Msa1203830:CDS
ATTAACCGTATCCTTGGCAA+AGG 0.593236 8_1:-58971102 Msa1203830:CDS
CTTCAGGGTGATCTCAACAT+CGG 0.601478 8_1:-58971198 Msa1203830:CDS
GGTTTGGCTGAAGGAAGAAG+AGG 0.605675 8_1:-58970995 Msa1203830:CDS
GGTACGTCGTGACTGCGGAA+AGG 0.609568 8_1:-58971034 Msa1203830:CDS
TGCTTCCGACAATCAAGCGT+CGG 0.618599 8_1:-58971434 Msa1203830:CDS
GAAATCACATCATTTGTGAG+AGG 0.623568 8_1:+58975230 None:intergenic
GTATGTTTAATATGGTAACA+AGG 0.624294 8_1:+58975516 None:intergenic
GGTGGAGATTGACACTGCCA+AGG 0.626051 8_1:-58970962 Msa1203830:CDS
AACAGATCTTACAGCAGCGG+GGG 0.636718 8_1:+58971401 None:intergenic
AGGCTGTTGTCTAGGACATG+TGG 0.639094 8_1:-58970882 Msa1203830:exon
ACAAATGATGTGATTTCTTG+GGG 0.640243 8_1:-58975224 Msa1203830:CDS
GGTCAATGTTAAGAAGTGCA+AGG 0.644391 8_1:-58970813 Msa1203830:three_prime_UTR
TCTCGATGGATAAGTCTGAT+CGG 0.645977 8_1:+58971304 None:intergenic
TCAGCAGCACCAGAGTGCGA+AGG 0.648598 8_1:+58971360 None:intergenic
TTTGGCTGAAGGAAGAAGAG+GGG 0.668209 8_1:-58970993 Msa1203830:CDS
GTGGAGATTGACACTGCCAA+GGG 0.681976 8_1:-58970961 Msa1203830:CDS
AATGTGGTACGTCGTGACTG+CGG 0.686354 8_1:-58971039 Msa1203830:CDS
CAACAGATCTTACAGCAGCG+GGG 0.700402 8_1:+58971400 None:intergenic
TCAGGGCGGTCTCAACATCG+GGG 0.720922 8_1:-58971133 Msa1203830:CDS
TTGCTTGCTTATCTTCAGGG+CGG 0.721162 8_1:-58971147 Msa1203830:CDS
GGATGATGATGATGACAATG+TGG 0.760143 8_1:-58971055 Msa1203830:CDS
TCAGGGTGATCTCAACATCG+GGG 0.765373 8_1:-58971196 Msa1203830:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGTATTTATGTATTTATAAA+AGG + chr8_1:58971086-58971105 None:intergenic 10.0%
!! AAAAATAAAAACAAAACATT+TGG + chr8_1:58972128-58972147 None:intergenic 10.0%
!! TTATTGTAAATATACATTAA+TGG - chr8_1:58972513-58972532 Msa1203830:intron 10.0%
!!! TTATATATTTTTTTTTTGAC+TGG - chr8_1:58972751-58972770 Msa1203830:intron 10.0%
!!! ATAAATTTTTTGTTTTTTGA+AGG - chr8_1:58972934-58972953 Msa1203830:intron 10.0%
!! ATTCTAATTAAATTAATTGA+AGG + chr8_1:58973151-58973170 None:intergenic 10.0%
!! ATTTAATAATTAAAATGCAT+CGG - chr8_1:58973475-58973494 Msa1203830:intron 10.0%
!!! AATTATTTAACTTTATCATA+AGG - chr8_1:58974347-58974366 Msa1203830:intron 10.0%
!!! ATTATTTAACTTTATCATAA+GGG - chr8_1:58974348-58974367 Msa1203830:intron 10.0%
!! GAAAATAAATAAAGAAAAAG+GGG + chr8_1:58970991-58971010 None:intergenic 15.0%
!! GGAAAATAAATAAAGAAAAA+GGG + chr8_1:58970992-58971011 None:intergenic 15.0%
!! AGGAAAATAAATAAAGAAAA+AGG + chr8_1:58970993-58971012 None:intergenic 15.0%
!! TTAAAAAAGTCAAATGTATT+TGG + chr8_1:58971669-58971688 None:intergenic 15.0%
!! CAAAAAGAAAAGAAAAAAAA+AGG + chr8_1:58972280-58972299 None:intergenic 15.0%
!! AGAAAAATAAAATATCGAAA+AGG + chr8_1:58972370-58972389 None:intergenic 15.0%
!!! ATATACATTAATGGTTTTTA+TGG - chr8_1:58972522-58972541 Msa1203830:intron 15.0%
!! TTTAATTAATTGCTATGTAA+CGG - chr8_1:58972792-58972811 Msa1203830:intron 15.0%
!!! TTTCTACTTAATTTTAATTG+TGG - chr8_1:58973075-58973094 Msa1203830:intron 15.0%
!! ATTGAAGGTAAATTAAAAAA+CGG + chr8_1:58973136-58973155 None:intergenic 15.0%
!!! ACTATAGTAATTATTTTTTG+TGG + chr8_1:58973324-58973343 None:intergenic 15.0%
!! TAAACTATTAAATCGATTAA+AGG - chr8_1:58973437-58973456 Msa1203830:intron 15.0%
!! AAACTATTAAATCGATTAAA+GGG - chr8_1:58973438-58973457 Msa1203830:intron 15.0%
!!! ATTATCTGTTTTTTTTTTGA+AGG - chr8_1:58973540-58973559 Msa1203830:intron 15.0%
!! AAAAATAAAGAATTATCTGT+TGG - chr8_1:58973563-58973582 Msa1203830:intron 15.0%
!!! TTTATTCTCACAAATATTTT+TGG - chr8_1:58973934-58973953 Msa1203830:intron 15.0%
!!! TGTTTTTTCTACAATTTTAA+AGG - chr8_1:58974056-58974075 Msa1203830:intron 15.0%
!!! ACTTTATTTAAAAAGACTAT+CGG + chr8_1:58974452-58974471 None:intergenic 15.0%
!! AAATCATAAAACAATACTTC+TGG + chr8_1:58970657-58970676 None:intergenic 20.0%
!!! AGAAGAAGTTTTATTGTTAT+TGG + chr8_1:58970795-58970814 None:intergenic 20.0%
!!! AAAGTTTTTGTATGAACAAA+AGG + chr8_1:58971013-58971032 None:intergenic 20.0%
!! GTTCATACAAAAACTTTATA+AGG - chr8_1:58971016-58971035 Msa1203830:CDS 20.0%
!!! CAAATTCTACTTTGTTTATT+TGG + chr8_1:58971138-58971157 None:intergenic 20.0%
!! GAAAATAAAACCATAAAAGA+TGG + chr8_1:58971413-58971432 None:intergenic 20.0%
!!! TAAGAGTTTTGACTTAATAA+TGG + chr8_1:58971795-58971814 None:intergenic 20.0%
!!! GTTTATTAGTTTATGCTTAA+TGG - chr8_1:58971854-58971873 Msa1203830:intron 20.0%
!! AGACTTTATTACATATGAAT+TGG - chr8_1:58971903-58971922 Msa1203830:intron 20.0%
!! TATTATTATGATCCTTCAAT+TGG + chr8_1:58971977-58971996 None:intergenic 20.0%
!! TTGAAGGATCATAATAATAT+TGG - chr8_1:58971978-58971997 Msa1203830:intron 20.0%
!!! TGTTTTATTACTTTTATGTG+TGG - chr8_1:58972224-58972243 Msa1203830:intron 20.0%
!! TTAATTAATTGCTATGTAAC+GGG - chr8_1:58972793-58972812 Msa1203830:intron 20.0%
!!! AAATATTTTTGAACAACTTC+CGG + chr8_1:58972862-58972881 None:intergenic 20.0%
!! TTGAAGGTAAATTAAAAAAC+GGG + chr8_1:58973135-58973154 None:intergenic 20.0%
!!! ACTTACATCATGAAAATTTT+CGG - chr8_1:58973812-58973831 Msa1203830:intron 20.0%
!!! AACAAGCTTTAATGAAATTT+AGG + chr8_1:58973843-58973862 None:intergenic 20.0%
!!! TTTGAAATGTTATATACACA+AGG + chr8_1:58973882-58973901 None:intergenic 20.0%
!!! ATTTTTTTCTTCCAATTTAG+TGG - chr8_1:58974194-58974213 Msa1203830:intron 20.0%
!!! TATATCCTATTATCATTTTG+AGG - chr8_1:58974523-58974542 Msa1203830:intron 20.0%
!! AACAATACACACAAAATATT+AGG - chr8_1:58974551-58974570 Msa1203830:intron 20.0%
!! TAATATCATATTGCATGTTA+GGG + chr8_1:58974831-58974850 None:intergenic 20.0%
!! ATAATATCATATTGCATGTT+AGG + chr8_1:58974832-58974851 None:intergenic 20.0%
! ACAAAGAGAGAGAAAAAAAA+AGG + chr8_1:58970694-58970713 None:intergenic 25.0%
! TTATTCATTTCCATAAGCTT+TGG - chr8_1:58970749-58970768 Msa1203830:three_prime_UTR 25.0%
! CAAGGAATTGAAAAAAGTTT+AGG + chr8_1:58970951-58970970 None:intergenic 25.0%
! GTATGTTTAATATGGTAACA+AGG + chr8_1:58970969-58970988 None:intergenic 25.0%
!! AAAAAGGGGTATGTTTAATA+TGG + chr8_1:58970977-58970996 None:intergenic 25.0%
!!! TGAAACAAGTTGAATTTTCA+AGG - chr8_1:58971307-58971326 Msa1203830:CDS 25.0%
!!! GAAACAAGTTGAATTTTCAA+GGG - chr8_1:58971308-58971327 Msa1203830:CDS 25.0%
!! TTGTTGTGCTTGAAATATTT+TGG + chr8_1:58971342-58971361 None:intergenic 25.0%
!!! CTAGTTTTAAAACCGATAAA+AGG - chr8_1:58971608-58971627 Msa1203830:intron 25.0%
!! TGAACTCATATTAGTATTGA+TGG - chr8_1:58971738-58971757 Msa1203830:intron 25.0%
! TTGGTAAATTTATTTGAGTG+TGG - chr8_1:58971922-58971941 Msa1203830:intron 25.0%
! TGGTAAATTTATTTGAGTGT+GGG - chr8_1:58971923-58971942 Msa1203830:intron 25.0%
!! TTGCCAAATAAATCCATTTT+TGG - chr8_1:58973102-58973121 Msa1203830:intron 25.0%
!! CAACCAAAAATGGATTTATT+TGG + chr8_1:58973108-58973127 None:intergenic 25.0%
!!! CAAATAAATCCATTTTTGGT+TGG - chr8_1:58973106-58973125 Msa1203830:intron 25.0%
! TGAAGGTAAATTAAAAAACG+GGG + chr8_1:58973134-58973153 None:intergenic 25.0%
! ATAAACTTGAGGATTAAGAA+AGG - chr8_1:58973698-58973717 Msa1203830:intron 25.0%
! TTACAATAAAGTGTGCAAAA+AGG - chr8_1:58973767-58973786 Msa1203830:intron 25.0%
! TGTCATATAAAATGAGTTTG+CGG + chr8_1:58974147-58974166 None:intergenic 25.0%
! ATTTACGTAAACCACTAAAT+TGG + chr8_1:58974208-58974227 None:intergenic 25.0%
! TGTTTGTAGTGTATCTAATT+TGG - chr8_1:58974233-58974252 Msa1203830:intron 25.0%
! TACACTATTGTAAACTTACA+TGG - chr8_1:58974288-58974307 Msa1203830:intron 25.0%
! TAAGGGTAGTTTACTTATTT+CGG - chr8_1:58974365-58974384 Msa1203830:intron 25.0%
! AAATATTCACCAACTTTATG+CGG + chr8_1:58974429-58974448 None:intergenic 25.0%
! ATAATCACAGATAATGAGTT+GGG - chr8_1:58974499-58974518 Msa1203830:intron 25.0%
!! ACCAAATCGACTTTAATTAT+AGG - chr8_1:58974724-58974743 Msa1203830:intron 25.0%
! ACCTATAATTAAAGTCGATT+TGG + chr8_1:58974728-58974747 None:intergenic 25.0%
!! AAATCGACTTTAATTATAGG+TGG - chr8_1:58974727-58974746 Msa1203830:intron 25.0%
! GGTGTGAATTATAAATTCAT+TGG - chr8_1:58974791-58974810 Msa1203830:intron 25.0%
! ATCTTGAATTTCAATTTCTC+AGG - chr8_1:58974956-58974975 Msa1203830:intron 25.0%
! TCTTGAATTTCAATTTCTCA+GGG - chr8_1:58974957-58974976 Msa1203830:intron 25.0%
!!! GAGAACTTTTTAGTTTACAT+TGG - chr8_1:58975648-58975667 Msa1203830:five_prime_UTR 25.0%
! ATACAAATTTCGTAGTTGTT+TGG - chr8_1:58975696-58975715 Msa1203830:five_prime_UTR 25.0%
!!! AATTATTTTCCTAGCTTTTG+TGG - chr8_1:58975795-58975814 Msa1203830:five_prime_UTR 25.0%
TGTTCTCTGTTTAGAAGTTA+TGG - chr8_1:58970711-58970730 Msa1203830:three_prime_UTR 30.0%
! CATTTTCGTTTCTTTCTCTT+TGG - chr8_1:58970869-58970888 Msa1203830:three_prime_UTR 30.0%
CAAAGTAGAATTTGTGAAGT+AGG - chr8_1:58971144-58971163 Msa1203830:CDS 30.0%
TCACAAATGATGTGATTTCT+TGG - chr8_1:58971256-58971275 Msa1203830:CDS 30.0%
CACAAATGATGTGATTTCTT+GGG - chr8_1:58971257-58971276 Msa1203830:CDS 30.0%
ACAAATGATGTGATTTCTTG+GGG - chr8_1:58971258-58971277 Msa1203830:CDS 30.0%
! TTTAAAACCGATAAAAGGAC+CGG - chr8_1:58971613-58971632 Msa1203830:intron 30.0%
ACAATAAACATTTGACATGC+CGG + chr8_1:58971635-58971654 None:intergenic 30.0%
!! ACTCATATTAGTATTGATGG+TGG - chr8_1:58971741-58971760 Msa1203830:intron 30.0%
GGTAAATTTATTTGAGTGTG+GGG - chr8_1:58971924-58971943 Msa1203830:intron 30.0%
ACGTTGAATGAAAATTAGAG+TGG - chr8_1:58972006-58972025 Msa1203830:intron 30.0%
CGTTGAATGAAAATTAGAGT+GGG - chr8_1:58972007-58972026 Msa1203830:intron 30.0%
!! ACAAAACATTTGGTGTGAAA+AGG + chr8_1:58972118-58972137 None:intergenic 30.0%
!!! TTTTTTTAAGCAGACACATG+TGG + chr8_1:58972185-58972204 None:intergenic 30.0%
! AGATAGTGCTATAGAACTTT+TGG - chr8_1:58972302-58972321 Msa1203830:intron 30.0%
ACAATAATCTAGTCTACATG+CGG + chr8_1:58972500-58972519 None:intergenic 30.0%
TTGTCTTGTATTTGTACGAA+CGG - chr8_1:58972680-58972699 Msa1203830:intron 30.0%
!!! AGTTAGTTCTATCTTTTGAG+TGG - chr8_1:58972970-58972989 Msa1203830:intron 30.0%
!!! GTTAGTTCTATCTTTTGAGT+GGG - chr8_1:58972971-58972990 Msa1203830:intron 30.0%
TCAGTATATACTTTAGTCCT+TGG - chr8_1:58973217-58973236 Msa1203830:intron 30.0%
ATATACTTTAGTCCTTGGTA+TGG - chr8_1:58973222-58973241 Msa1203830:intron 30.0%
TCGAAATTGTCTTGATCAAA+AGG - chr8_1:58973672-58973691 Msa1203830:intron 30.0%
!! TCAAAAGGTTGATAAACTTG+AGG - chr8_1:58973687-58973706 Msa1203830:intron 30.0%
TAGAGTGAGAGATAAAAACA+GGG + chr8_1:58973906-58973925 None:intergenic 30.0%
TTAGAGTGAGAGATAAAAAC+AGG + chr8_1:58973907-58973926 None:intergenic 30.0%
! ACTTATTTCGGTGTGTAATT+AGG - chr8_1:58974377-58974396 Msa1203830:intron 30.0%
! GTGTGTAATTAGGTGTTTTT+CGG - chr8_1:58974387-58974406 Msa1203830:intron 30.0%
! TGTGTAATTAGGTGTTTTTC+GGG - chr8_1:58974388-58974407 Msa1203830:intron 30.0%
TAGAAAAATCCGCATAAAGT+TGG - chr8_1:58974417-58974436 Msa1203830:intron 30.0%
CATAATCACAGATAATGAGT+TGG - chr8_1:58974498-58974517 Msa1203830:intron 30.0%
ATCGACCTCAAAATGATAAT+AGG + chr8_1:58974531-58974550 None:intergenic 30.0%
!! ATCACATGATAACTAGTCTT+TGG - chr8_1:58974770-58974789 Msa1203830:intron 30.0%
CTTGAATTTCAATTTCTCAG+GGG - chr8_1:58974958-58974977 Msa1203830:intron 30.0%
TGAAAAATTAACCAGTGAAC+TGG - chr8_1:58975223-58975242 Msa1203830:CDS 30.0%
!! ATTTCGTAGTTGTTTGGTTT+TGG - chr8_1:58975702-58975721 Msa1203830:five_prime_UTR 30.0%
!!! AGTTTTATTGATCTGCTTGT+AGG - chr8_1:58975772-58975791 Msa1203830:five_prime_UTR 30.0%
!!! ATGAAGACGATGTTTTGAAA+TGG - chr8_1:58975820-58975839 Msa1203830:five_prime_UTR 30.0%
!! TTCCATAAGCTTTGGATTCA+TGG - chr8_1:58970757-58970776 Msa1203830:three_prime_UTR 35.0%
ATCCATGAATCCAAAGCTTA+TGG + chr8_1:58970762-58970781 None:intergenic 35.0%
!!! TTCTCTTTGGCTTTTATTGC+TGG - chr8_1:58970882-58970901 Msa1203830:exon 35.0%
!!! TCTCTTTGGCTTTTATTGCT+GGG - chr8_1:58970883-58970902 Msa1203830:exon 35.0%
AGAATTTGTGAAGTAGGTGA+AGG - chr8_1:58971150-58971169 Msa1203830:CDS 35.0%
GAATTTGTGAAGTAGGTGAA+GGG - chr8_1:58971151-58971170 Msa1203830:CDS 35.0%
GGAAGAAGAAAATGTCTAAG+AGG - chr8_1:58971181-58971200 Msa1203830:CDS 35.0%
GAAGAAAATGTCTAAGAGGT+TGG - chr8_1:58971185-58971204 Msa1203830:CDS 35.0%
TCATAGGTCTTGGTCAAAAA+TGG + chr8_1:58971219-58971238 None:intergenic 35.0%
ATCAATCATCTCATAGGTCT+TGG + chr8_1:58971229-58971248 None:intergenic 35.0%
AGGATCATCAATCATCTCAT+AGG + chr8_1:58971235-58971254 None:intergenic 35.0%
GAAATCACATCATTTGTGAG+AGG + chr8_1:58971255-58971274 None:intergenic 35.0%
! AAATGGCAACACTTTTGTTG+TGG - chr8_1:58971284-58971303 Msa1203830:CDS 35.0%
ATGGAACAAGACACTTACAT+AGG + chr8_1:58971394-58971413 None:intergenic 35.0%
!! GTGTCTTGTTCCATCTTTTA+TGG - chr8_1:58971400-58971419 Msa1203830:CDS 35.0%
AATTTATTTGAGTGTGGGGT+AGG - chr8_1:58971928-58971947 Msa1203830:intron 35.0%
ATTTATTTGAGTGTGGGGTA+GGG - chr8_1:58971929-58971948 Msa1203830:intron 35.0%
CACATTACGTAGGATAGAAT+TGG - chr8_1:58972033-58972052 Msa1203830:intron 35.0%
!!! CGTAGTGTTTTGCTATTTCT+TGG - chr8_1:58972150-58972169 Msa1203830:intron 35.0%
! AGTGCTATAGAACTTTTGGT+AGG - chr8_1:58972306-58972325 Msa1203830:intron 35.0%
TGTCTTGTATTTGTACGAAC+GGG - chr8_1:58972681-58972700 Msa1203830:intron 35.0%
! AATTGCTATGTAACGGGAAA+TGG - chr8_1:58972799-58972818 Msa1203830:intron 35.0%
TTGAGGATTAAGAAAGGATG+TGG - chr8_1:58973704-58973723 Msa1203830:intron 35.0%
ATAAGTAGCAAGTAGCATTG+AGG + chr8_1:58974881-58974900 None:intergenic 35.0%
CCCTCTCTTAAAATTCTCTT+GGG + chr8_1:58975018-58975037 None:intergenic 35.0%
!! CCCAAGAGAATTTTAAGAGA+GGG - chr8_1:58975015-58975034 Msa1203830:intron 35.0%
!! CCAAGAGAATTTTAAGAGAG+GGG - chr8_1:58975016-58975035 Msa1203830:intron 35.0%
! TTTGAGTCTTTTGTTCTCGA+TGG + chr8_1:58975195-58975214 None:intergenic 35.0%
CGAGAACAAAAGACTCAAAA+TGG - chr8_1:58975196-58975215 Msa1203830:CDS 35.0%
AGAATTGCTTGCTTATCTTC+AGG - chr8_1:58975268-58975287 Msa1203830:CDS 35.0%
GAATTGCTTGCTTATCTTCA+GGG - chr8_1:58975269-58975288 Msa1203830:CDS 35.0%
AGAATTGCTTGCTTATCTTC+AGG - chr8_1:58975268-58975287 Msa1203830:CDS 35.0%
GAATTGCTTGCTTATCTTCA+GGG - chr8_1:58975269-58975288 Msa1203830:CDS 35.0%
GATGAAATTAACCGTATCCT+TGG - chr8_1:58975374-58975393 Msa1203830:five_prime_UTR 35.0%
! GAAAGGGTATAAGACTGTTT+GGG - chr8_1:58975465-58975484 Msa1203830:five_prime_UTR 35.0%
! AAAGGGTATAAGACTGTTTG+GGG - chr8_1:58975466-58975485 Msa1203830:five_prime_UTR 35.0%
! GACTTTTACACAGCTATGAT+CGG - chr8_1:58975746-58975765 Msa1203830:five_prime_UTR 35.0%
!! TTGGCTTTTATTGCTGGGAT+TGG - chr8_1:58970888-58970907 Msa1203830:exon 40.0%
! TGGCTTTTATTGCTGGGATT+GGG - chr8_1:58970889-58970908 Msa1203830:exon 40.0%
GTGATTTCTTGGGGTGAAAA+TGG - chr8_1:58971267-58971286 Msa1203830:CDS 40.0%
!! GTATTGATGGTGGATCACTT+AGG - chr8_1:58971751-58971770 Msa1203830:intron 40.0%
TTTATTTGAGTGTGGGGTAG+GGG - chr8_1:58971930-58971949 Msa1203830:intron 40.0%
TACGTGGAACTTCCAATTGA+AGG - chr8_1:58971962-58971981 Msa1203830:intron 40.0%
! GCTATAGAACTTTTGGTAGG+TGG - chr8_1:58972309-58972328 Msa1203830:intron 40.0%
! TAGAACTTTTGGTAGGTGGA+TGG - chr8_1:58972313-58972332 Msa1203830:intron 40.0%
GTCTTGTATTTGTACGAACG+GGG - chr8_1:58972682-58972701 Msa1203830:intron 40.0%
TGAACAACTTCCGGATAAGT+TGG + chr8_1:58972853-58972872 None:intergenic 40.0%
AGCTAAGATCTTCCATACCA+AGG + chr8_1:58973237-58973256 None:intergenic 40.0%
GAAAGGATGTGGCTTTCTTA+AGG - chr8_1:58973715-58973734 Msa1203830:intron 40.0%
TTTCAATTTCTCAGGGGTTC+CGG - chr8_1:58974964-58974983 Msa1203830:intron 40.0%
!! GCCCAAGAGAATTTTAAGAG+AGG - chr8_1:58975014-58975033 Msa1203830:intron 40.0%
CCCCTCTCTTAAAATTCTCT+TGG + chr8_1:58975019-58975038 None:intergenic 40.0%
TCTCGATGGATAAGTCTGAT+CGG + chr8_1:58975181-58975200 None:intergenic 40.0%
ATTAACCGTATCCTTGGCAA+AGG - chr8_1:58975380-58975399 Msa1203830:five_prime_UTR 40.0%
CATCATCATCATCCGTATCA+TGG + chr8_1:58975421-58975440 None:intergenic 40.0%
! GGATGATGATGATGACAATG+TGG - chr8_1:58975427-58975446 Msa1203830:five_prime_UTR 40.0%
! GGAAAGGGTATAAGACTGTT+TGG - chr8_1:58975464-58975483 Msa1203830:five_prime_UTR 40.0%
! GTATAAGACTGTTTGGGGTT+TGG - chr8_1:58975471-58975490 Msa1203830:five_prime_UTR 40.0%
CATTGTTGGCACCATCAATT+GGG + chr8_1:58975574-58975593 None:intergenic 40.0%
TCATTGTTGGCACCATCAAT+TGG + chr8_1:58975575-58975594 None:intergenic 40.0%
AACAGCCTTGAACTCATTGT+TGG + chr8_1:58975588-58975607 None:intergenic 40.0%
! GGTCAATGTTAAGAAGTGCA+AGG - chr8_1:58975669-58975688 Msa1203830:five_prime_UTR 40.0%
TCTTCATTGCCACAAAAGCT+AGG + chr8_1:58975807-58975826 None:intergenic 40.0%
GAAGTAGGTGAAGGGTAGAT+CGG - chr8_1:58971159-58971178 Msa1203830:CDS 45.0%
AAGTAGGTGAAGGGTAGATC+GGG - chr8_1:58971160-58971179 Msa1203830:CDS 45.0%
! TGACATGCCGGTCCTTTTAT+CGG + chr8_1:58971623-58971642 None:intergenic 45.0%
!! GATGGTGGATCACTTAGGAA+CGG - chr8_1:58971756-58971775 Msa1203830:intron 45.0%
!! ATGGTGGATCACTTAGGAAC+GGG - chr8_1:58971757-58971776 Msa1203830:intron 45.0%
! GTAGGGGCTAGAATTTTACG+TGG - chr8_1:58971946-58971965 Msa1203830:intron 45.0%
! GAGTGGGTTTCACATTACGT+AGG - chr8_1:58972023-58972042 Msa1203830:intron 45.0%
TGTATTTGTACGAACGGGGT+TGG - chr8_1:58972686-58972705 Msa1203830:intron 45.0%
! TGCTATGTAACGGGAAATGG+AGG - chr8_1:58972802-58972821 Msa1203830:intron 45.0%
CACCACTCTACCAACTTATC+CGG - chr8_1:58972840-58972859 Msa1203830:intron 45.0%
!! TTCCGGATAAGTTGGTAGAG+TGG + chr8_1:58972845-58972864 None:intergenic 45.0%
AACGGGGAACCAACCAAAAA+TGG + chr8_1:58973118-58973137 None:intergenic 45.0%
TTGGGCGAATTCCCATTTGT+CGG + chr8_1:58975000-58975019 None:intergenic 45.0%
TCCAACAGATCTTACAGCAG+CGG + chr8_1:58975087-58975106 None:intergenic 45.0%
GCTGTAAGATCTGTTGGAGT+TGG - chr8_1:58975089-58975108 Msa1203830:intron 45.0%
GTAAGATCTGTTGGAGTTGG+CGG - chr8_1:58975092-58975111 Msa1203830:intron 45.0%
TAAGATCTGTTGGAGTTGGC+GGG - chr8_1:58975093-58975112 Msa1203830:intron 45.0%
!! TCTGGTGCTGCTGAAGATAT+GGG - chr8_1:58975131-58975150 Msa1203830:CDS 45.0%
GATATGGGATCAACTTCGAC+CGG - chr8_1:58975146-58975165 Msa1203830:CDS 45.0%
CTTCAGGGTGATCTCAACAT+CGG - chr8_1:58975284-58975303 Msa1203830:CDS 45.0%
TTCAGGGTGATCTCAACATC+GGG - chr8_1:58975285-58975304 Msa1203830:CDS 45.0%
TTGCTTGCTTATCTTCAGGG+CGG - chr8_1:58975272-58975291 Msa1203830:CDS 45.0%
TCGTTCCTTTGCCAAGGATA+CGG + chr8_1:58975388-58975407 None:intergenic 45.0%
ATCCTTGGCAAAGGAACGAA+TGG - chr8_1:58975389-58975408 Msa1203830:five_prime_UTR 45.0%
TCCTTGGCAAAGGAACGAAT+GGG - chr8_1:58975390-58975409 Msa1203830:five_prime_UTR 45.0%
ATCATCATCCGTATCATGGC+TGG + chr8_1:58975417-58975436 None:intergenic 45.0%
GTTTGGCTGAAGGAAGAAGA+GGG - chr8_1:58975488-58975507 Msa1203830:five_prime_UTR 45.0%
TTTGGCTGAAGGAAGAAGAG+GGG - chr8_1:58975489-58975508 Msa1203830:five_prime_UTR 45.0%
! TGGTGCCAACAATGAGTTCA+AGG - chr8_1:58975580-58975599 Msa1203830:five_prime_UTR 45.0%
TGAGTTCAAGGCTGTTGTCT+AGG - chr8_1:58975592-58975611 Msa1203830:five_prime_UTR 45.0%
! GTTGTCTAGGACATGTGGTA+AGG - chr8_1:58975605-58975624 Msa1203830:five_prime_UTR 45.0%
!! AATAGTTTAATTAATTTAAA+AGG + chr8_1:58973426-58973445 None:intergenic 5.0%
!! CGGATAAGTTGGTAGAGTGG+TGG + chr8_1:58972842-58972861 None:intergenic 50.0%
ATTTGTCGGCAGCAGCTTTC+CGG + chr8_1:58974986-58975005 None:intergenic 50.0%
GAAAGCTGCTGCCGACAAAT+GGG - chr8_1:58974986-58975005 Msa1203830:intron 50.0%
CTTGATTGTCGGAAGCAGCT+CGG + chr8_1:58975045-58975064 None:intergenic 50.0%
TGCTTCCGACAATCAAGCGT+CGG - chr8_1:58975048-58975067 Msa1203830:intron 50.0%
GTCTTCCGACGCTTGATTGT+CGG + chr8_1:58975056-58975075 None:intergenic 50.0%
AACAGATCTTACAGCAGCGG+GGG + chr8_1:58975084-58975103 None:intergenic 50.0%
CAACAGATCTTACAGCAGCG+GGG + chr8_1:58975085-58975104 None:intergenic 50.0%
CCAACAGATCTTACAGCAGC+GGG + chr8_1:58975086-58975105 None:intergenic 50.0%
!! CTCTGGTGCTGCTGAAGATA+TGG - chr8_1:58975130-58975149 Msa1203830:CDS 50.0%
TCAGGGTGATCTCAACATCG+GGG - chr8_1:58975286-58975305 Msa1203830:CDS 50.0%
ACCCATTCGTTCCTTTGCCA+AGG + chr8_1:58975394-58975413 None:intergenic 50.0%
GAATGGGTCCAGCCATGATA+CGG - chr8_1:58975406-58975425 Msa1203830:five_prime_UTR 50.0%
AATGTGGTACGTCGTGACTG+CGG - chr8_1:58975443-58975462 Msa1203830:five_prime_UTR 50.0%
! ACTGTTTGGGGTTTGGCTGA+AGG - chr8_1:58975478-58975497 Msa1203830:five_prime_UTR 50.0%
GGTTTGGCTGAAGGAAGAAG+AGG - chr8_1:58975487-58975506 Msa1203830:five_prime_UTR 50.0%
GGAAGAAGAGGGGAAAGACA+AGG - chr8_1:58975499-58975518 Msa1203830:five_prime_UTR 50.0%
AGAAGAGGGGAAAGACAAGG+TGG - chr8_1:58975502-58975521 Msa1203830:five_prime_UTR 50.0%
GTGGAGATTGACACTGCCAA+GGG - chr8_1:58975521-58975540 Msa1203830:five_prime_UTR 50.0%
! AGGCTGTTGTCTAGGACATG+TGG - chr8_1:58975600-58975619 Msa1203830:five_prime_UTR 50.0%
!! GTACGAACGGGGTTGGTACT+TGG - chr8_1:58972693-58972712 Msa1203830:intron 55.0%
! GTAACGGGAAATGGAGGCAG+TGG - chr8_1:58972808-58972827 Msa1203830:intron 55.0%
GGAAAGCTGCTGCCGACAAA+TGG - chr8_1:58974985-58975004 Msa1203830:intron 55.0%
CCCGCTGCTGTAAGATCTGT+TGG - chr8_1:58975083-58975102 Msa1203830:intron 55.0%
GGGAATTCACCTTCGCACTC+TGG - chr8_1:58975113-58975132 Msa1203830:CDS 55.0%
GGGATCAACTTCGACCGGAT+CGG - chr8_1:58975151-58975170 Msa1203830:CDS 55.0%
ATCAACTTCGACCGGATCGG+TGG - chr8_1:58975154-58975173 Msa1203830:CDS 55.0%
CTTCACGAGTGCCAGTTCAC+TGG + chr8_1:58975237-58975256 None:intergenic 55.0%
CTTCAGGGCGGTCTCAACAT+CGG - chr8_1:58975347-58975366 Msa1203830:five_prime_UTR 55.0%
TTCAGGGCGGTCTCAACATC+GGG - chr8_1:58975348-58975367 Msa1203830:five_prime_UTR 55.0%
GTACGTCGTGACTGCGGAAA+GGG - chr8_1:58975449-58975468 Msa1203830:five_prime_UTR 55.0%
GGTGGAGATTGACACTGCCA+AGG - chr8_1:58975520-58975539 Msa1203830:five_prime_UTR 55.0%
TCTCTTGTGGCAGCTACCCT+TGG + chr8_1:58975540-58975559 None:intergenic 55.0%
AAGGGTAGCTGCCACAAGAG+AGG - chr8_1:58975539-58975558 Msa1203830:five_prime_UTR 55.0%
AGGGTAGCTGCCACAAGAGA+GGG - chr8_1:58975540-58975559 Msa1203830:five_prime_UTR 55.0%
GGGCGTGAAGACCCAATTGA+TGG - chr8_1:58975560-58975579 Msa1203830:five_prime_UTR 55.0%
TCTTACAGCAGCGGGGGACT+GGG + chr8_1:58975078-58975097 None:intergenic 60.0%
ATCTTACAGCAGCGGGGGAC+TGG + chr8_1:58975079-58975098 None:intergenic 60.0%
TCAGCAGCACCAGAGTGCGA+AGG + chr8_1:58975125-58975144 None:intergenic 60.0%
GTCTGATCGGTCCACCGATC+CGG + chr8_1:58975168-58975187 None:intergenic 60.0%
TCAGGGCGGTCTCAACATCG+GGG - chr8_1:58975349-58975368 Msa1203830:five_prime_UTR 60.0%
GGTACGTCGTGACTGCGGAA+AGG - chr8_1:58975448-58975467 Msa1203830:five_prime_UTR 60.0%
GGTCTTCACGCCCTCTCTTG+TGG + chr8_1:58975553-58975572 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 58970647 58975857 58970647 ID=Msa1203830;Name=Msa1203830
chr8_1 mRNA 58970647 58975857 58970647 ID=Msa1203830-mRNA-1;Parent=Msa1203830;Name=Msa1203830-mRNA-1;_AED=0.01;_eAED=0.01;_QI=545|1|1|1|1|1|2|244|279
chr8_1 exon 58970647 58971526 58970647 ID=Msa1203830-mRNA-1:exon:19066;Parent=Msa1203830-mRNA-1
chr8_1 exon 58975109 58975857 58975109 ID=Msa1203830-mRNA-1:exon:19065;Parent=Msa1203830-mRNA-1
chr8_1 five_prime_UTR 58975313 58975857 58975313 ID=Msa1203830-mRNA-1:five_prime_utr;Parent=Msa1203830-mRNA-1
chr8_1 CDS 58975109 58975312 58975109 ID=Msa1203830-mRNA-1:cds;Parent=Msa1203830-mRNA-1
chr8_1 CDS 58970891 58971526 58970891 ID=Msa1203830-mRNA-1:cds;Parent=Msa1203830-mRNA-1
chr8_1 three_prime_UTR 58970647 58970890 58970647 ID=Msa1203830-mRNA-1:three_prime_utr;Parent=Msa1203830-mRNA-1
Gene Sequence

>Msa1203830

ATGTCTAAGAGGTTGGCAGCAGCACCATTTTTGACCAAGACCTATGAGATGATTGATGATCCTCTCACAAATGATGTGATTTCTTGGGGTGAAAATGGCAACACTTTTGTTGTGGTGAAACAAGTTGAATTTTCAAGGGATTTGCTTCCAAAATATTTCAAGCACAACAATTTCTCAAGCTTTGTTCGTCAACTTAACACCTATGGGTTCCGGAAAGCTGCTGCCGACAAATGGGAATTCGCCCAAGAGAATTTTAAGAGAGGGGAGACCGAGCTGCTTCCGACAATCAAGCGTCGGAAGACCCAGTCCCCCGCTGCTGTAAGATCTGTTGGAGTTGGCGGGAATTCACCTTCGCACTCTGGTGCTGCTGAAGATATGGGATCAACTTCGACCGGATCGGTGGACCGATCAGACTTATCCATCGAGAACAAAAGACTCAAAATGGATAATGAAAAATTAACCAGTGAACTGGCACTCGTGAAGAAAAAGTGTGAAGAATTGCTTGCTTATCTTCAGGGTGATCTCAACATCGGGGCACTTGCAAAGAAAAAGTGTGAAGAATTGCTTGCTTATCTTCAGGGCGGTCTCAACATCGGGGCTGATGAAATTAACCGTATCCTTGGCAAAGGAACGAATGGGTCCAGCCATGATACGGATGATGATGATGACAATGTGGTACGTCGTGACTGCGGAAAGGGTATAAGACTGTTTGGGGTTTGGCTGAAGGAAGAAGAGGGGAAAGACAAGGTGGAGATTGACACTGCCAAGGGTAGCTGCCACAAGAGAGGGCGTGAAGACCCAATTGATGGTGCCAACAATGAGTTCAAGGCTGTTGTCTAG
Protein sequence

>Msa1203830

MSKRLAAAPFLTKTYEMIDDPLTNDVISWGENGNTFVVVKQVEFSRDLLPKYFKHNNFSSFVRQLNTYGFRKAAADKWEFAQENFKRGETELLPTIKRRKTQSPAAVRSVGVGGNSPSHSGAAEDMGSTSTGSVDRSDLSIENKRLKMDNEKLTSELALVKKKCEELLAYLQGDLNIGALAKKKCEELLAYLQGGLNIGADEINRILGKGTNGSSHDTDDDDDNVVRRDCGKGIRLFGVWLKEEEGKDKVEIDTAKGSCHKRGREDPIDGANNEFKAVV*