AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1330920

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1330920 MtrunA17_Chr8g0375041 82.079 279 27 3 1 279 1 256 7.46e-166 459
Msa1330920 MtrunA17_Chr5g0402291 45.645 287 106 7 1 268 1 256 1.79e-70 219
Msa1330920 MtrunA17_Chr3g0134031 36.704 267 114 6 2 216 17 280 1.85e-48 164
Msa1330920 MtrunA17_Chr7g0257331 48.795 166 79 1 3 168 16 175 2.07e-47 158
Msa1330920 MtrunA17_Chr5g0397881 43.719 199 83 3 2 171 17 215 2.93e-47 161
Msa1330920 MtrunA17_Chr5g0441531 42.857 182 100 2 2 179 18 199 5.55e-45 152
Msa1330920 MtrunA17_Chr1g0203601 43.000 200 98 3 2 185 11 210 2.58e-42 147
Msa1330920 MtrunA17_Chr6g0472421 40.500 200 89 1 2 171 26 225 1.71e-41 145
Msa1330920 MtrunA17_Chr5g0410881 41.176 187 102 1 6 192 29 207 3.69e-41 148
Msa1330920 MtrunA17_Chr4g0039891 41.667 192 97 4 9 197 12 191 5.32e-41 147
Msa1330920 MtrunA17_Chr7g0260331 61.458 96 37 0 5 100 45 140 7.12e-37 134
Msa1330920 MtrunA17_Chr6g0467041 60.215 93 37 0 8 100 21 113 1.06e-36 133
Msa1330920 MtrunA17_Chr1g0204741 38.172 186 99 3 7 192 38 207 4.79e-36 131
Msa1330920 MtrunA17_Chr1g0185131 55.963 109 47 1 5 112 28 136 4.89e-35 129
Msa1330920 MtrunA17_Chr3g0135831 37.879 198 98 5 5 197 42 219 5.32e-35 129
Msa1330920 MtrunA17_Chr6g0485571 56.000 100 44 0 1 100 3 102 7.26e-35 128
Msa1330920 MtrunA17_Chr8g0392001 58.416 101 41 1 7 106 20 120 1.13e-34 128
Msa1330920 MtrunA17_Chr8g0379701 42.282 149 69 2 9 156 12 144 1.61e-34 129
Msa1330920 MtrunA17_Chr2g0284481 39.884 173 87 3 7 175 13 172 9.91e-34 126
Msa1330920 MtrunA17_Chr4g0071051 56.842 95 41 0 5 99 97 191 8.40e-33 124
Msa1330920 MtrunA17_Chr8g0378061 58.242 91 38 0 10 100 23 113 4.01e-32 123
Msa1330920 MtrunA17_Chr4g0047421 39.375 160 89 2 6 161 30 185 4.03e-32 117
Msa1330920 MtrunA17_Chr2g0330821 53.191 94 44 0 7 100 77 170 4.77e-29 113
Msa1330920 MtrunA17_Chr1g0179321 60.317 63 25 0 6 68 46 108 7.13e-24 93.2
Msa1330920 MtrunA17_Chr4g0023771 56.667 60 26 0 7 66 13 72 2.23e-18 78.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1330920 AT4G36990.1 43.411 258 119 5 2 247 7 249 4.49e-56 182
Msa1330920 AT1G46264.1 35.836 293 132 7 6 247 31 318 1.02e-45 157
Msa1330920 AT2G41690.1 45.810 179 85 3 6 172 37 215 1.96e-43 148
Msa1330920 AT4G11660.1 41.500 200 77 2 2 161 52 251 2.22e-42 149
Msa1330920 AT3G02990.1 42.105 190 93 4 6 192 20 195 1.21e-41 149
Msa1330920 AT1G32330.2 43.316 187 100 3 6 192 34 214 7.77e-41 147
Msa1330920 AT1G32330.1 43.316 187 100 3 6 192 34 214 1.02e-40 147
Msa1330920 AT5G62020.1 40.625 192 92 4 2 171 16 207 2.25e-40 142
Msa1330920 AT5G16820.1 41.327 196 87 5 6 192 24 200 3.42e-40 145
Msa1330920 AT5G16820.2 41.327 196 87 5 6 192 24 200 3.42e-40 145
Msa1330920 AT4G17750.1 36.404 228 135 3 7 230 50 271 4.34e-38 140
Msa1330920 AT3G51910.1 52.101 119 48 1 6 124 26 135 4.20e-37 132
Msa1330920 AT3G24520.1 42.169 166 75 4 8 171 16 162 6.35e-37 134
Msa1330920 AT2G26150.1 38.624 189 101 1 9 197 44 217 1.00e-36 134
Msa1330920 AT2G26150.4 38.624 189 101 1 9 197 44 217 1.00e-36 134
Msa1330920 AT3G22830.1 59.375 96 39 0 6 101 58 153 6.05e-35 130
Msa1330920 AT5G43840.1 38.122 181 95 2 3 183 13 176 2.20e-34 126
Msa1330920 AT3G63350.1 36.898 187 99 1 7 193 26 193 3.47e-34 125
Msa1330920 AT5G03720.2 60.638 94 37 0 8 101 54 147 6.09e-34 127
Msa1330920 AT5G03720.1 60.638 94 37 0 8 101 54 147 6.09e-34 127
Msa1330920 AT4G13980.1 41.718 163 74 2 10 172 24 165 1.06e-33 128
Msa1330920 AT1G67970.1 43.125 160 75 3 7 165 17 161 1.04e-32 124
Msa1330920 AT5G54070.1 55.435 92 41 0 8 99 70 161 2.43e-32 122
Msa1330920 AT5G45710.3 43.137 153 70 2 6 157 10 146 5.11e-31 118
Msa1330920 AT5G45710.1 43.137 153 70 2 6 157 10 146 5.11e-31 118
Msa1330920 AT4G18880.1 35.922 206 103 4 6 209 12 190 1.73e-29 115
Msa1330920 AT4G18870.1 39.560 91 55 0 6 96 143 233 5.04e-18 82.4
Msa1330920 AT4G18870.1 39.785 93 51 3 6 96 10 99 2.27e-14 72.0
Msa1330920 AT1G77570.1 37.931 87 51 2 10 93 27 113 7.78e-12 62.4

Find 103 sgRNAs with CRISPR-Local

Find 259 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTATTTATGTATTTATAAA+AGG 0.180298 8_4:-50228882 None:intergenic
AGGAAAATAAATAAAGAAAA+AGG 0.187830 8_4:-50228789 None:intergenic
CTCTGGTGCTGCTGAAGATA+TGG 0.236484 8_4:+50232914 Msa1330920:CDS
TTGTTGTGCTTGAAATATTT+TGG 0.239756 8_4:-50229138 None:intergenic
TTCCATAAGCTTTGGATTCA+TGG 0.249690 8_4:+50228577 Msa1330920:five_prime_UTR
ATTTCGTAGTTGTTTGGTTT+TGG 0.287663 8_4:+50233486 Msa1330920:three_prime_UTR
TCACAAATGATGTGATTTCT+TGG 0.292322 8_4:+50229055 Msa1330920:CDS
ATCCATGAATCCAAAGCTTA+TGG 0.293713 8_4:-50228579 None:intergenic
CGAGAACAAAAGACTCAAAA+TGG 0.305997 8_4:+50232980 Msa1330920:CDS
GTGATTTCTTGGGGTGAAAA+TGG 0.307729 8_4:+50229066 Msa1330920:CDS
ATTTGTCGGCAGCAGCTTTC+CGG 0.311222 8_4:-50232767 None:intergenic
CCCCTCTCTTAAAATTCTCT+TGG 0.321950 8_4:-50232800 None:intergenic
AAATCATAAAACAATACTTC+TGG 0.327276 8_4:-50228474 None:intergenic
TTTCAATTTCTCAGGGGTTC+CGG 0.336163 8_4:+50232748 Msa1330920:intron
TGTTCTCTGTTTAGAAGTTA+TGG 0.336664 8_4:+50228531 Msa1330920:five_prime_UTR
CACAAATGATGTGATTTCTT+GGG 0.344507 8_4:+50229056 Msa1330920:CDS
GAAAGGGTATAAGACTGTTT+GGG 0.345034 8_4:+50233249 Msa1330920:CDS
GTATAAGACTGTTTGGGGTT+TGG 0.352030 8_4:+50233255 Msa1330920:CDS
TTCAGGGCGGTCTCAACATC+GGG 0.365918 8_4:+50233132 Msa1330920:CDS
AGAATTGCTTGCTTATCTTC+AGG 0.367247 8_4:+50233052 Msa1330920:CDS
AGAATTGCTTGCTTATCTTC+AGG 0.372663 8_4:+50233115 Msa1330920:CDS
TCATTGTTGGCACCATCAAT+TGG 0.373020 8_4:-50233356 None:intergenic
TTATTCATTTCCATAAGCTT+TGG 0.373179 8_4:+50228569 Msa1330920:five_prime_UTR
GGAAAGGGTATAAGACTGTT+TGG 0.390575 8_4:+50233248 Msa1330920:CDS
ATACAAATTTCGTAGTTGTT+TGG 0.391325 8_4:+50233480 Msa1330920:three_prime_UTR
GGAAAGCTGCTGCCGACAAA+TGG 0.392444 8_4:+50232769 Msa1330920:CDS
TCTCTTGTGGCAGCTACCCT+TGG 0.404436 8_4:-50233321 None:intergenic
GTCTTCCGACGCTTGATTGT+CGG 0.414985 8_4:-50232837 None:intergenic
TTCAGGGTGATCTCAACATC+GGG 0.437971 8_4:+50233069 Msa1330920:CDS
GTCTGATCGGTCCACCGATC+CGG 0.438684 8_4:-50232949 None:intergenic
AGGATCATCAATCATCTCAT+AGG 0.440358 8_4:-50229031 None:intergenic
CCCGCTGCTGTAAGATCTGT+TGG 0.442824 8_4:+50232867 Msa1330920:CDS
CCCTCTCTTAAAATTCTCTT+GGG 0.443216 8_4:-50232799 None:intergenic
GAATTGCTTGCTTATCTTCA+GGG 0.443640 8_4:+50233053 Msa1330920:CDS
GAATTGCTTGCTTATCTTCA+GGG 0.444946 8_4:+50233116 Msa1330920:CDS
CAAAGTAGAATTTGTGAAGT+AGG 0.450996 8_4:+50228943 Msa1330920:five_prime_UTR
AAGTAGGTGAAGGGTAGATC+GGG 0.453594 8_4:+50228959 Msa1330920:five_prime_UTR
ATCATCATCCGTATCATGGC+TGG 0.456429 8_4:-50233198 None:intergenic
AACAGCCTTGAACTCATTGT+TGG 0.460694 8_4:-50233369 None:intergenic
CATTGTTGGCACCATCAATT+GGG 0.461669 8_4:-50233355 None:intergenic
GAAGTAGGTGAAGGGTAGAT+CGG 0.467714 8_4:+50228958 Msa1330920:five_prime_UTR
ATCAATCATCTCATAGGTCT+TGG 0.469811 8_4:-50229025 None:intergenic
GGGCGTGAAGACCCAATTGA+TGG 0.486085 8_4:+50233344 Msa1330920:CDS
TCGTTCCTTTGCCAAGGATA+CGG 0.487676 8_4:-50233169 None:intergenic
GATGAAATTAACCGTATCCT+TGG 0.490434 8_4:+50233158 Msa1330920:CDS
GAAAGCTGCTGCCGACAAAT+GGG 0.492919 8_4:+50232770 Msa1330920:CDS
CATCATCATCATCCGTATCA+TGG 0.496813 8_4:-50233202 None:intergenic
TTGGGCGAATTCCCATTTGT+CGG 0.497343 8_4:-50232781 None:intergenic
TCTGGTGCTGCTGAAGATAT+GGG 0.499437 8_4:+50232915 Msa1330920:CDS
CCAACAGATCTTACAGCAGC+GGG 0.502479 8_4:-50232867 None:intergenic
GTACGTCGTGAATGCGGAAA+GGG 0.504721 8_4:+50233233 Msa1330920:CDS
GCTGTAAGATCTGTTGGAGT+TGG 0.513039 8_4:+50232873 Msa1330920:CDS
GAAGAAAATGTCTAAGAGGT+TGG 0.514254 8_4:+50228984 Msa1330920:exon
GTTTGGCTGAAGGAAGAAGA+GGG 0.514660 8_4:+50233272 Msa1330920:CDS
TGAGTTCAAGGCTGTTGTCT+AGG 0.515335 8_4:+50233376 Msa1330920:CDS
CTTCACGAGTGCCAGTTCAC+TGG 0.517956 8_4:-50233018 None:intergenic
TAAGATCTGTTGGAGTTGGC+GGG 0.518928 8_4:+50232877 Msa1330920:CDS
GGGAATTCACCTTCGCACTC+TGG 0.523578 8_4:+50232897 Msa1330920:CDS
ACCCATTCGTTCCTTTGCCA+AGG 0.525178 8_4:-50233175 None:intergenic
GGTCTTCACGCCCTCTCTTG+TGG 0.525936 8_4:-50233334 None:intergenic
GTAAGATCTGTTGGAGTTGG+CGG 0.525989 8_4:+50232876 Msa1330920:CDS
GAATTTGTGAAGTAGGTGAA+GGG 0.527424 8_4:+50228950 Msa1330920:five_prime_UTR
ATCCTTGGCAAAGGAACGAA+TGG 0.527436 8_4:+50233173 Msa1330920:CDS
CTTCAGGGCGGTCTCAACAT+CGG 0.528747 8_4:+50233131 Msa1330920:CDS
AGAATTTGTGAAGTAGGTGA+AGG 0.530681 8_4:+50228949 Msa1330920:five_prime_UTR
ACTGTTTGGGGTTTGGCTGA+AGG 0.533700 8_4:+50233262 Msa1330920:CDS
AGGGTAGCTGCCACAAGAGA+GGG 0.548965 8_4:+50233324 Msa1330920:CDS
AGAAGAGGGGAAAGACAAGG+TGG 0.549839 8_4:+50233286 Msa1330920:CDS
GAATGGGTCCAGCCATGATA+CGG 0.552219 8_4:+50233190 Msa1330920:CDS
GGGATCAACTTCGACCGGAT+CGG 0.553641 8_4:+50232935 Msa1330920:CDS
GGAAGAAGAAAATGTCTAAG+AGG 0.554539 8_4:+50228980 Msa1330920:exon
CTTGATTGTCGGAAGCAGCT+CGG 0.555478 8_4:-50232826 None:intergenic
TGGTGCCAACAATGAGTTCA+AGG 0.555667 8_4:+50233364 Msa1330920:CDS
TCCAACAGATCTTACAGCAG+CGG 0.556507 8_4:-50232868 None:intergenic
GTTGTCTAGGACATGTGGTA+AGG 0.558034 8_4:+50233389 Msa1330920:exon
AAGGGTAGCTGCCACAAGAG+AGG 0.563776 8_4:+50233323 Msa1330920:CDS
GGTACGTCGTGAATGCGGAA+AGG 0.565791 8_4:+50233232 Msa1330920:CDS
GATATGGGATCAACTTCGAC+CGG 0.569648 8_4:+50232930 Msa1330920:CDS
TCCTTGGCAAAGGAACGAAT+GGG 0.573236 8_4:+50233174 Msa1330920:CDS
GGAAGAAGAGGGGAAAGACA+AGG 0.573733 8_4:+50233283 Msa1330920:CDS
AAAGGGTATAAGACTGTTTG+GGG 0.582432 8_4:+50233250 Msa1330920:CDS
ATCAACTTCGACCGGATCGG+TGG 0.586784 8_4:+50232938 Msa1330920:CDS
ATTAACCGTATCCTTGGCAA+AGG 0.593236 8_4:+50233164 Msa1330920:CDS
CTTCAGGGTGATCTCAACAT+CGG 0.601478 8_4:+50233068 Msa1330920:CDS
GGTTTGGCTGAAGGAAGAAG+AGG 0.605675 8_4:+50233271 Msa1330920:CDS
TGCTTCCGACAATCAAGCGT+CGG 0.618599 8_4:+50232832 Msa1330920:CDS
GAAATCACATCATTTGTGAG+AGG 0.623568 8_4:-50229051 None:intergenic
GTATGTTTAATATGGTAACA+AGG 0.624294 8_4:-50228765 None:intergenic
GGTGGAGATTGACACTGCCA+AGG 0.626051 8_4:+50233304 Msa1330920:CDS
AACAGATCTTACAGCAGCGG+GGG 0.636718 8_4:-50232865 None:intergenic
AGGCTGTTGTCTAGGACATG+TGG 0.639094 8_4:+50233384 Msa1330920:exon
ACAAATGATGTGATTTCTTG+GGG 0.640243 8_4:+50229057 Msa1330920:CDS
GGTCAATGTTAAGAAGTGCA+AGG 0.644391 8_4:+50233453 Msa1330920:three_prime_UTR
TCTCGATGGATAAGTCTGAT+CGG 0.645977 8_4:-50232962 None:intergenic
TCAGCAGCACCAGAGTGCGA+AGG 0.648598 8_4:-50232906 None:intergenic
AATGTGGTACGTCGTGAATG+CGG 0.667673 8_4:+50233227 Msa1330920:CDS
TTTGGCTGAAGGAAGAAGAG+GGG 0.668209 8_4:+50233273 Msa1330920:CDS
GTGGAGATTGACACTGCCAA+GGG 0.681976 8_4:+50233305 Msa1330920:CDS
CAACAGATCTTACAGCAGCG+GGG 0.700402 8_4:-50232866 None:intergenic
TCAGGGCGGTCTCAACATCG+GGG 0.720922 8_4:+50233133 Msa1330920:CDS
TTGCTTGCTTATCTTCAGGG+CGG 0.721162 8_4:+50233119 Msa1330920:CDS
GGATGATGATGATGACAATG+TGG 0.760143 8_4:+50233211 Msa1330920:CDS
TCAGGGTGATCTCAACATCG+GGG 0.765373 8_4:+50233070 Msa1330920:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGTATTTATGTATTTATAAA+AGG - chr8_4:50228885-50228904 None:intergenic 10.0%
!! AAAAATAAAAACAAAACATT+TGG - chr8_4:50229927-50229946 None:intergenic 10.0%
!! TCAAAAAGAAAAAAAAAAAA+AGG - chr8_4:50230079-50230098 None:intergenic 10.0%
!! TTATTGTAAATATACATTAA+TGG + chr8_4:50230311-50230330 Msa1330920:intron 10.0%
!!! TTATATATTTTTTTTTTGAC+TGG + chr8_4:50230549-50230568 Msa1330920:intron 10.0%
!!! ATAAATTTTTTGTTTTTTGA+AGG + chr8_4:50230732-50230751 Msa1330920:intron 10.0%
!! ATTCTAATTAAATTAATTGA+AGG - chr8_4:50230949-50230968 None:intergenic 10.0%
!! ATTTAATAATTAAAATGCAT+CGG + chr8_4:50231272-50231291 Msa1330920:intron 10.0%
!!! AATTATTTAACTTTATCATA+AGG + chr8_4:50232143-50232162 Msa1330920:intron 10.0%
!!! ATTATTTAACTTTATCATAA+GGG + chr8_4:50232144-50232163 Msa1330920:intron 10.0%
!! GAAAATAAATAAAGAAAAAG+GGG - chr8_4:50228790-50228809 None:intergenic 15.0%
!! GGAAAATAAATAAAGAAAAA+GGG - chr8_4:50228791-50228810 None:intergenic 15.0%
!! AGGAAAATAAATAAAGAAAA+AGG - chr8_4:50228792-50228811 None:intergenic 15.0%
!! TTAAAAAAGTCAAATGTATT+TGG - chr8_4:50229468-50229487 None:intergenic 15.0%
!! AGAAAAATAAAATATCGAAA+AGG - chr8_4:50230168-50230187 None:intergenic 15.0%
!!! ATATACATTAATGGTTTTTA+TGG + chr8_4:50230320-50230339 Msa1330920:intron 15.0%
!! TTTAATTAATTGCTATGTAA+CGG + chr8_4:50230590-50230609 Msa1330920:intron 15.0%
!!! TTTCTACTTAATTTTAATTG+TGG + chr8_4:50230873-50230892 Msa1330920:intron 15.0%
!! ATTGAAGGTAAATTAAAAAA+CGG - chr8_4:50230934-50230953 None:intergenic 15.0%
!!! AACTATAGTAATTATTTTTG+TGG - chr8_4:50231122-50231141 None:intergenic 15.0%
!! TAAACTATTAAATCGATTAA+AGG + chr8_4:50231234-50231253 Msa1330920:intron 15.0%
!! AAACTATTAAATCGATTAAA+GGG + chr8_4:50231235-50231254 Msa1330920:intron 15.0%
!!! ATTATCTGTTTTTTTTTTGA+AGG + chr8_4:50231337-50231356 Msa1330920:intron 15.0%
!! AAAAATAAAGAATTATCTGT+TGG + chr8_4:50231360-50231379 Msa1330920:intron 15.0%
!!! TTTATTCTCACAAATATTTT+TGG + chr8_4:50231730-50231749 Msa1330920:intron 15.0%
!!! TGTTTTTTCTACAATTTTAA+AGG + chr8_4:50231852-50231871 Msa1330920:intron 15.0%
!!! ACTTTATTTAAAAAGACTAT+CGG - chr8_4:50232248-50232267 None:intergenic 15.0%
!! AAATCATAAAACAATACTTC+TGG - chr8_4:50228477-50228496 None:intergenic 20.0%
!!! AGAAGAAGTTTTATTGTTAT+TGG - chr8_4:50228615-50228634 None:intergenic 20.0%
!!! AAAGTTTTTGTATGAACAAA+AGG - chr8_4:50228812-50228831 None:intergenic 20.0%
!! GTTCATACAAAAACTTTATA+AGG + chr8_4:50228815-50228834 Msa1330920:five_prime_UTR 20.0%
!! GAAAATAAAACCATAAAAGA+TGG - chr8_4:50229212-50229231 None:intergenic 20.0%
!!! TAAGAGTTTTGACTTAATAA+TGG - chr8_4:50229594-50229613 None:intergenic 20.0%
!!! GTTTATTAGTTTATGCTTAA+TGG + chr8_4:50229653-50229672 Msa1330920:intron 20.0%
!! AGACTTTATTACATATGAAT+TGG + chr8_4:50229702-50229721 Msa1330920:intron 20.0%
!! TATTATTATGATCCTTCAAT+TGG - chr8_4:50229776-50229795 None:intergenic 20.0%
!! TTGAAGGATCATAATAATAT+TGG + chr8_4:50229777-50229796 Msa1330920:intron 20.0%
!!! TGTTTTATTACTTTTATGTG+TGG + chr8_4:50230023-50230042 Msa1330920:intron 20.0%
!! TTAATTAATTGCTATGTAAC+GGG + chr8_4:50230591-50230610 Msa1330920:intron 20.0%
!!! AAATATTTTTGAACAACTTC+CGG - chr8_4:50230660-50230679 None:intergenic 20.0%
!! TTGAAGGTAAATTAAAAAAC+GGG - chr8_4:50230933-50230952 None:intergenic 20.0%
!!! ACTTACATCATGAAAATTTT+CGG + chr8_4:50231608-50231627 Msa1330920:intron 20.0%
!!! AACAAGCTTTAATGAAATTT+AGG - chr8_4:50231639-50231658 None:intergenic 20.0%
!!! TTTGAAATGTTATATACACA+AGG - chr8_4:50231678-50231697 None:intergenic 20.0%
!!! ATTTTTTTCTTCCAATTTAG+TGG + chr8_4:50231990-50232009 Msa1330920:intron 20.0%
!! TACACTATTGTAAATTTACA+TGG + chr8_4:50232084-50232103 Msa1330920:intron 20.0%
!!! TATATCCTATTATCATTTTG+AGG + chr8_4:50232319-50232338 Msa1330920:intron 20.0%
!! AACAATACACACAAAATATT+AGG + chr8_4:50232347-50232366 Msa1330920:intron 20.0%
!! TAATATCATATTGCATGTTA+GGG - chr8_4:50232623-50232642 None:intergenic 20.0%
!! ATAATATCATATTGCATGTT+AGG - chr8_4:50232624-50232643 None:intergenic 20.0%
!!! AATTATTTTCCTAGTTTTTG+TGG + chr8_4:50233579-50233598 Msa1330920:three_prime_UTR 20.0%
! ACAAAGAGAGAGAAAAAAAA+AGG - chr8_4:50228514-50228533 None:intergenic 25.0%
! TTATTCATTTCCATAAGCTT+TGG + chr8_4:50228569-50228588 Msa1330920:five_prime_UTR 25.0%
! CAAGGAATTGAAAAAAGTTT+AGG - chr8_4:50228750-50228769 None:intergenic 25.0%
! GTATGTTTAATATGGTAACA+AGG - chr8_4:50228768-50228787 None:intergenic 25.0%
!! AAAAAGGGGTATGTTTAATA+TGG - chr8_4:50228776-50228795 None:intergenic 25.0%
!!! TGAAACAAGTTGAATTTTCA+AGG + chr8_4:50229106-50229125 Msa1330920:CDS 25.0%
!!! GAAACAAGTTGAATTTTCAA+GGG + chr8_4:50229107-50229126 Msa1330920:CDS 25.0%
!! TTGTTGTGCTTGAAATATTT+TGG - chr8_4:50229141-50229160 None:intergenic 25.0%
!!! CTAGTTTTAAAACCGATAAA+AGG + chr8_4:50229407-50229426 Msa1330920:intron 25.0%
!! TGAACTCATATTAGTATTGA+TGG + chr8_4:50229537-50229556 Msa1330920:intron 25.0%
! TTGGTAAATTTATTTGAGTG+TGG + chr8_4:50229721-50229740 Msa1330920:intron 25.0%
! TGGTAAATTTATTTGAGTGT+GGG + chr8_4:50229722-50229741 Msa1330920:intron 25.0%
!! TTGCCAAATAAATCCATTTT+TGG + chr8_4:50230900-50230919 Msa1330920:intron 25.0%
!! CAACCAAAAATGGATTTATT+TGG - chr8_4:50230906-50230925 None:intergenic 25.0%
!!! CAAATAAATCCATTTTTGGT+TGG + chr8_4:50230904-50230923 Msa1330920:intron 25.0%
! TGAAGGTAAATTAAAAAACG+GGG - chr8_4:50230932-50230951 None:intergenic 25.0%
! ATAAACTTGAGGATTAAGAA+AGG + chr8_4:50231495-50231514 Msa1330920:intron 25.0%
! TTACAATAAAGTGTGCAAAA+AGG + chr8_4:50231563-50231582 Msa1330920:intron 25.0%
! TGTCATATAAAATGAGTTTG+CGG - chr8_4:50231943-50231962 None:intergenic 25.0%
! ATTTACGTAAACCACTAAAT+TGG - chr8_4:50232004-50232023 None:intergenic 25.0%
! TGTTTGTAGTGTATCTAATT+TGG + chr8_4:50232029-50232048 Msa1330920:intron 25.0%
! TAAGGGTAGTTTACTTATTT+CGG + chr8_4:50232161-50232180 Msa1330920:intron 25.0%
! AAATATTCACCAACTTTATG+CGG - chr8_4:50232225-50232244 None:intergenic 25.0%
! ATAATCACAGATAATGAGTT+GGG + chr8_4:50232295-50232314 Msa1330920:intron 25.0%
!! ACCAAATCGACTTTAATTAT+AGG + chr8_4:50232516-50232535 Msa1330920:intron 25.0%
! ACCTATAATTAAAGTCGATT+TGG - chr8_4:50232520-50232539 None:intergenic 25.0%
!! AAATCGACTTTAATTATAGG+TGG + chr8_4:50232519-50232538 Msa1330920:intron 25.0%
! GGTGTGAATTATAAATTCAT+TGG + chr8_4:50232583-50232602 Msa1330920:intron 25.0%
! ATCTTGAATTTCAATTTCTC+AGG + chr8_4:50232740-50232759 Msa1330920:intron 25.0%
! TCTTGAATTTCAATTTCTCA+GGG + chr8_4:50232741-50232760 Msa1330920:intron 25.0%
!!! GAGAACTTTTTAGTTTACAT+TGG + chr8_4:50233432-50233451 Msa1330920:three_prime_UTR 25.0%
! ATACAAATTTCGTAGTTGTT+TGG + chr8_4:50233480-50233499 Msa1330920:three_prime_UTR 25.0%
TGTTCTCTGTTTAGAAGTTA+TGG + chr8_4:50228531-50228550 Msa1330920:five_prime_UTR 30.0%
! CATTTTCGTTTCTTTCTCTT+TGG + chr8_4:50228668-50228687 Msa1330920:five_prime_UTR 30.0%
CAAAGTAGAATTTGTGAAGT+AGG + chr8_4:50228943-50228962 Msa1330920:five_prime_UTR 30.0%
TCACAAATGATGTGATTTCT+TGG + chr8_4:50229055-50229074 Msa1330920:CDS 30.0%
CACAAATGATGTGATTTCTT+GGG + chr8_4:50229056-50229075 Msa1330920:CDS 30.0%
ACAAATGATGTGATTTCTTG+GGG + chr8_4:50229057-50229076 Msa1330920:CDS 30.0%
! TTTAAAACCGATAAAAGGAC+CGG + chr8_4:50229412-50229431 Msa1330920:intron 30.0%
ACAATAAACATTTGACATGC+CGG - chr8_4:50229434-50229453 None:intergenic 30.0%
!! ACTCATATTAGTATTGATGG+TGG + chr8_4:50229540-50229559 Msa1330920:intron 30.0%
GGTAAATTTATTTGAGTGTG+GGG + chr8_4:50229723-50229742 Msa1330920:intron 30.0%
ACGTTGAATGAAAATTAGAG+TGG + chr8_4:50229805-50229824 Msa1330920:intron 30.0%
CGTTGAATGAAAATTAGAGT+GGG + chr8_4:50229806-50229825 Msa1330920:intron 30.0%
!! ACAAAACATTTGGTGTGAAA+AGG - chr8_4:50229917-50229936 None:intergenic 30.0%
!!! TTTTTTTAAGCAGACACATG+TGG - chr8_4:50229984-50230003 None:intergenic 30.0%
! AGATAGTGCTATAGAACTTT+TGG + chr8_4:50230100-50230119 Msa1330920:intron 30.0%
ACAATAATCTAGTCTACATG+CGG - chr8_4:50230298-50230317 None:intergenic 30.0%
TTGTCTTGTATTTGTACGAA+CGG + chr8_4:50230478-50230497 Msa1330920:intron 30.0%
!!! AGTTAGTTCTATCTTTTGAG+TGG + chr8_4:50230768-50230787 Msa1330920:intron 30.0%
!!! GTTAGTTCTATCTTTTGAGT+GGG + chr8_4:50230769-50230788 Msa1330920:intron 30.0%
TCAGTATATACTTTAGTCCT+TGG + chr8_4:50231015-50231034 Msa1330920:intron 30.0%
ATATACTTTAGTCCTTGGTA+TGG + chr8_4:50231020-50231039 Msa1330920:intron 30.0%
TCGAAATTGTCTTGATCAAA+AGG + chr8_4:50231469-50231488 Msa1330920:intron 30.0%
!! TCAAAAGGTTGATAAACTTG+AGG + chr8_4:50231484-50231503 Msa1330920:intron 30.0%
TAGAGTGAGAGATAAAAACA+GGG - chr8_4:50231702-50231721 None:intergenic 30.0%
TTAGAGTGAGAGATAAAAAC+AGG - chr8_4:50231703-50231722 None:intergenic 30.0%
! ACTTATTTCGGTGTGTAATT+AGG + chr8_4:50232173-50232192 Msa1330920:intron 30.0%
! GTGTGTAATTAGGTGTTTTT+CGG + chr8_4:50232183-50232202 Msa1330920:intron 30.0%
! TGTGTAATTAGGTGTTTTTC+GGG + chr8_4:50232184-50232203 Msa1330920:intron 30.0%
TAGAAAAATCCGCATAAAGT+TGG + chr8_4:50232213-50232232 Msa1330920:intron 30.0%
CATAATCACAGATAATGAGT+TGG + chr8_4:50232294-50232313 Msa1330920:intron 30.0%
!!! TCCTATTATCATTTTGAGGT+CGG + chr8_4:50232323-50232342 Msa1330920:intron 30.0%
!! ATCACATGATAACTAGTCTT+TGG + chr8_4:50232562-50232581 Msa1330920:intron 30.0%
GCATATAATAAGTAGCATTG+AGG - chr8_4:50232672-50232691 None:intergenic 30.0%
CTTGAATTTCAATTTCTCAG+GGG + chr8_4:50232742-50232761 Msa1330920:intron 30.0%
TGAAAAATTAACCAGTGAAC+TGG + chr8_4:50233007-50233026 Msa1330920:CDS 30.0%
!! ATTTCGTAGTTGTTTGGTTT+TGG + chr8_4:50233486-50233505 Msa1330920:three_prime_UTR 30.0%
!!! AGTTTTATTGATCTGCTTGT+AGG + chr8_4:50233556-50233575 Msa1330920:three_prime_UTR 30.0%
!!! ATGAAGACGATGTTTTGAAA+TGG + chr8_4:50233604-50233623 Msa1330920:three_prime_UTR 30.0%
!! TTCCATAAGCTTTGGATTCA+TGG + chr8_4:50228577-50228596 Msa1330920:five_prime_UTR 35.0%
ATCCATGAATCCAAAGCTTA+TGG - chr8_4:50228582-50228601 None:intergenic 35.0%
!!! TTCTCTTTGGCTTTTATTGC+TGG + chr8_4:50228681-50228700 Msa1330920:five_prime_UTR 35.0%
!!! TCTCTTTGGCTTTTATTGCT+GGG + chr8_4:50228682-50228701 Msa1330920:five_prime_UTR 35.0%
AGAATTTGTGAAGTAGGTGA+AGG + chr8_4:50228949-50228968 Msa1330920:five_prime_UTR 35.0%
GAATTTGTGAAGTAGGTGAA+GGG + chr8_4:50228950-50228969 Msa1330920:five_prime_UTR 35.0%
GGAAGAAGAAAATGTCTAAG+AGG + chr8_4:50228980-50228999 Msa1330920:exon 35.0%
GAAGAAAATGTCTAAGAGGT+TGG + chr8_4:50228984-50229003 Msa1330920:exon 35.0%
TCATAGGTCTTGGTCAAAAA+TGG - chr8_4:50229018-50229037 None:intergenic 35.0%
ATCAATCATCTCATAGGTCT+TGG - chr8_4:50229028-50229047 None:intergenic 35.0%
AGGATCATCAATCATCTCAT+AGG - chr8_4:50229034-50229053 None:intergenic 35.0%
GAAATCACATCATTTGTGAG+AGG - chr8_4:50229054-50229073 None:intergenic 35.0%
! AAATGGCAACACTTTTGTTG+TGG + chr8_4:50229083-50229102 Msa1330920:CDS 35.0%
ATGGAACAAGACACTTACAT+AGG - chr8_4:50229193-50229212 None:intergenic 35.0%
!! GTGTCTTGTTCCATCTTTTA+TGG + chr8_4:50229199-50229218 Msa1330920:intron 35.0%
AATTTATTTGAGTGTGGGGT+AGG + chr8_4:50229727-50229746 Msa1330920:intron 35.0%
ATTTATTTGAGTGTGGGGTA+GGG + chr8_4:50229728-50229747 Msa1330920:intron 35.0%
CACATTACGTAGGATAGAAT+TGG + chr8_4:50229832-50229851 Msa1330920:intron 35.0%
!!! CGTAGTGTTTTGCTATTTCT+TGG + chr8_4:50229949-50229968 Msa1330920:intron 35.0%
! AGTGCTATAGAACTTTTGGT+AGG + chr8_4:50230104-50230123 Msa1330920:intron 35.0%
TGTCTTGTATTTGTACGAAC+GGG + chr8_4:50230479-50230498 Msa1330920:intron 35.0%
! AATTGCTATGTAACGGGAAA+TGG + chr8_4:50230597-50230616 Msa1330920:intron 35.0%
TTGAGGATTAAGAAAGGATG+TGG + chr8_4:50231501-50231520 Msa1330920:intron 35.0%
ACCGACCTCAAAATGATAAT+AGG - chr8_4:50232327-50232346 None:intergenic 35.0%
CCCTCTCTTAAAATTCTCTT+GGG - chr8_4:50232802-50232821 None:intergenic 35.0%
!! CCCAAGAGAATTTTAAGAGA+GGG + chr8_4:50232799-50232818 Msa1330920:CDS 35.0%
!! CCAAGAGAATTTTAAGAGAG+GGG + chr8_4:50232800-50232819 Msa1330920:CDS 35.0%
! TTTGAGTCTTTTGTTCTCGA+TGG - chr8_4:50232979-50232998 None:intergenic 35.0%
CGAGAACAAAAGACTCAAAA+TGG + chr8_4:50232980-50232999 Msa1330920:CDS 35.0%
AGAATTGCTTGCTTATCTTC+AGG + chr8_4:50233052-50233071 Msa1330920:CDS 35.0%
GAATTGCTTGCTTATCTTCA+GGG + chr8_4:50233053-50233072 Msa1330920:CDS 35.0%
AGAATTGCTTGCTTATCTTC+AGG + chr8_4:50233052-50233071 Msa1330920:CDS 35.0%
GAATTGCTTGCTTATCTTCA+GGG + chr8_4:50233053-50233072 Msa1330920:CDS 35.0%
GATGAAATTAACCGTATCCT+TGG + chr8_4:50233158-50233177 Msa1330920:CDS 35.0%
! GAAAGGGTATAAGACTGTTT+GGG + chr8_4:50233249-50233268 Msa1330920:CDS 35.0%
! AAAGGGTATAAGACTGTTTG+GGG + chr8_4:50233250-50233269 Msa1330920:CDS 35.0%
! GACTTTTACACAGCTATGAT+CGG + chr8_4:50233530-50233549 Msa1330920:three_prime_UTR 35.0%
TCTTCATTGCCACAAAAACT+AGG - chr8_4:50233591-50233610 None:intergenic 35.0%
!! TTGGCTTTTATTGCTGGGAT+TGG + chr8_4:50228687-50228706 Msa1330920:five_prime_UTR 40.0%
! TGGCTTTTATTGCTGGGATT+GGG + chr8_4:50228688-50228707 Msa1330920:five_prime_UTR 40.0%
GTGATTTCTTGGGGTGAAAA+TGG + chr8_4:50229066-50229085 Msa1330920:CDS 40.0%
!! GTATTGATGGTGGATCACTT+AGG + chr8_4:50229550-50229569 Msa1330920:intron 40.0%
TTTATTTGAGTGTGGGGTAG+GGG + chr8_4:50229729-50229748 Msa1330920:intron 40.0%
TACGTGGAACTTCCAATTGA+AGG + chr8_4:50229761-50229780 Msa1330920:intron 40.0%
! GCTATAGAACTTTTGGTAGG+TGG + chr8_4:50230107-50230126 Msa1330920:intron 40.0%
! TAGAACTTTTGGTAGGTGGA+TGG + chr8_4:50230111-50230130 Msa1330920:intron 40.0%
GTCTTGTATTTGTACGAACG+GGG + chr8_4:50230480-50230499 Msa1330920:intron 40.0%
TGAACAACTTCCGGATAAGT+TGG - chr8_4:50230651-50230670 None:intergenic 40.0%
AGCTAAGATCTTCCATACCA+AGG - chr8_4:50231035-50231054 None:intergenic 40.0%
GAAAGGATGTGGCTTTCTTA+AGG + chr8_4:50231512-50231531 Msa1330920:intron 40.0%
TTTCAATTTCTCAGGGGTTC+CGG + chr8_4:50232748-50232767 Msa1330920:intron 40.0%
!! GCCCAAGAGAATTTTAAGAG+AGG + chr8_4:50232798-50232817 Msa1330920:CDS 40.0%
CCCCTCTCTTAAAATTCTCT+TGG - chr8_4:50232803-50232822 None:intergenic 40.0%
TCTCGATGGATAAGTCTGAT+CGG - chr8_4:50232965-50232984 None:intergenic 40.0%
ATTAACCGTATCCTTGGCAA+AGG + chr8_4:50233164-50233183 Msa1330920:CDS 40.0%
CATCATCATCATCCGTATCA+TGG - chr8_4:50233205-50233224 None:intergenic 40.0%
! GGATGATGATGATGACAATG+TGG + chr8_4:50233211-50233230 Msa1330920:CDS 40.0%
! GGAAAGGGTATAAGACTGTT+TGG + chr8_4:50233248-50233267 Msa1330920:CDS 40.0%
! GTATAAGACTGTTTGGGGTT+TGG + chr8_4:50233255-50233274 Msa1330920:CDS 40.0%
CATTGTTGGCACCATCAATT+GGG - chr8_4:50233358-50233377 None:intergenic 40.0%
TCATTGTTGGCACCATCAAT+TGG - chr8_4:50233359-50233378 None:intergenic 40.0%
AACAGCCTTGAACTCATTGT+TGG - chr8_4:50233372-50233391 None:intergenic 40.0%
! GGTCAATGTTAAGAAGTGCA+AGG + chr8_4:50233453-50233472 Msa1330920:three_prime_UTR 40.0%
GAAGTAGGTGAAGGGTAGAT+CGG + chr8_4:50228958-50228977 Msa1330920:five_prime_UTR 45.0%
AAGTAGGTGAAGGGTAGATC+GGG + chr8_4:50228959-50228978 Msa1330920:five_prime_UTR 45.0%
! TGACATGCCGGTCCTTTTAT+CGG - chr8_4:50229422-50229441 None:intergenic 45.0%
!! GATGGTGGATCACTTAGGAA+CGG + chr8_4:50229555-50229574 Msa1330920:intron 45.0%
!! ATGGTGGATCACTTAGGAAC+GGG + chr8_4:50229556-50229575 Msa1330920:intron 45.0%
! GTAGGGGCTAGAATTTTACG+TGG + chr8_4:50229745-50229764 Msa1330920:intron 45.0%
! GAGTGGGTTTCACATTACGT+AGG + chr8_4:50229822-50229841 Msa1330920:intron 45.0%
TGTATTTGTACGAACGGGGT+TGG + chr8_4:50230484-50230503 Msa1330920:intron 45.0%
! TGCTATGTAACGGGAAATGG+AGG + chr8_4:50230600-50230619 Msa1330920:intron 45.0%
CACCACTCTACCAACTTATC+CGG + chr8_4:50230638-50230657 Msa1330920:intron 45.0%
!! TTCCGGATAAGTTGGTAGAG+TGG - chr8_4:50230643-50230662 None:intergenic 45.0%
AACGGGGAACCAACCAAAAA+TGG - chr8_4:50230916-50230935 None:intergenic 45.0%
TTGGGCGAATTCCCATTTGT+CGG - chr8_4:50232784-50232803 None:intergenic 45.0%
TCCAACAGATCTTACAGCAG+CGG - chr8_4:50232871-50232890 None:intergenic 45.0%
GCTGTAAGATCTGTTGGAGT+TGG + chr8_4:50232873-50232892 Msa1330920:CDS 45.0%
GTAAGATCTGTTGGAGTTGG+CGG + chr8_4:50232876-50232895 Msa1330920:CDS 45.0%
TAAGATCTGTTGGAGTTGGC+GGG + chr8_4:50232877-50232896 Msa1330920:CDS 45.0%
!! TCTGGTGCTGCTGAAGATAT+GGG + chr8_4:50232915-50232934 Msa1330920:CDS 45.0%
GATATGGGATCAACTTCGAC+CGG + chr8_4:50232930-50232949 Msa1330920:CDS 45.0%
CTTCAGGGTGATCTCAACAT+CGG + chr8_4:50233068-50233087 Msa1330920:CDS 45.0%
TTCAGGGTGATCTCAACATC+GGG + chr8_4:50233069-50233088 Msa1330920:CDS 45.0%
TTGCTTGCTTATCTTCAGGG+CGG + chr8_4:50233056-50233075 Msa1330920:CDS 45.0%
TCGTTCCTTTGCCAAGGATA+CGG - chr8_4:50233172-50233191 None:intergenic 45.0%
ATCCTTGGCAAAGGAACGAA+TGG + chr8_4:50233173-50233192 Msa1330920:CDS 45.0%
TCCTTGGCAAAGGAACGAAT+GGG + chr8_4:50233174-50233193 Msa1330920:CDS 45.0%
ATCATCATCCGTATCATGGC+TGG - chr8_4:50233201-50233220 None:intergenic 45.0%
AATGTGGTACGTCGTGAATG+CGG + chr8_4:50233227-50233246 Msa1330920:CDS 45.0%
GTTTGGCTGAAGGAAGAAGA+GGG + chr8_4:50233272-50233291 Msa1330920:CDS 45.0%
TTTGGCTGAAGGAAGAAGAG+GGG + chr8_4:50233273-50233292 Msa1330920:CDS 45.0%
! TGGTGCCAACAATGAGTTCA+AGG + chr8_4:50233364-50233383 Msa1330920:CDS 45.0%
TGAGTTCAAGGCTGTTGTCT+AGG + chr8_4:50233376-50233395 Msa1330920:CDS 45.0%
! GTTGTCTAGGACATGTGGTA+AGG + chr8_4:50233389-50233408 Msa1330920:exon 45.0%
!! AATAGTTTAATTAATTTAAA+AGG - chr8_4:50231223-50231242 None:intergenic 5.0%
!! CGGATAAGTTGGTAGAGTGG+TGG - chr8_4:50230640-50230659 None:intergenic 50.0%
ATTTGTCGGCAGCAGCTTTC+CGG - chr8_4:50232770-50232789 None:intergenic 50.0%
GAAAGCTGCTGCCGACAAAT+GGG + chr8_4:50232770-50232789 Msa1330920:CDS 50.0%
CTTGATTGTCGGAAGCAGCT+CGG - chr8_4:50232829-50232848 None:intergenic 50.0%
TGCTTCCGACAATCAAGCGT+CGG + chr8_4:50232832-50232851 Msa1330920:CDS 50.0%
GTCTTCCGACGCTTGATTGT+CGG - chr8_4:50232840-50232859 None:intergenic 50.0%
AACAGATCTTACAGCAGCGG+GGG - chr8_4:50232868-50232887 None:intergenic 50.0%
CAACAGATCTTACAGCAGCG+GGG - chr8_4:50232869-50232888 None:intergenic 50.0%
CCAACAGATCTTACAGCAGC+GGG - chr8_4:50232870-50232889 None:intergenic 50.0%
!! CTCTGGTGCTGCTGAAGATA+TGG + chr8_4:50232914-50232933 Msa1330920:CDS 50.0%
TCAGGGTGATCTCAACATCG+GGG + chr8_4:50233070-50233089 Msa1330920:CDS 50.0%
ACCCATTCGTTCCTTTGCCA+AGG - chr8_4:50233178-50233197 None:intergenic 50.0%
GAATGGGTCCAGCCATGATA+CGG + chr8_4:50233190-50233209 Msa1330920:CDS 50.0%
GTACGTCGTGAATGCGGAAA+GGG + chr8_4:50233233-50233252 Msa1330920:CDS 50.0%
! ACTGTTTGGGGTTTGGCTGA+AGG + chr8_4:50233262-50233281 Msa1330920:CDS 50.0%
GGTTTGGCTGAAGGAAGAAG+AGG + chr8_4:50233271-50233290 Msa1330920:CDS 50.0%
GGAAGAAGAGGGGAAAGACA+AGG + chr8_4:50233283-50233302 Msa1330920:CDS 50.0%
AGAAGAGGGGAAAGACAAGG+TGG + chr8_4:50233286-50233305 Msa1330920:CDS 50.0%
GTGGAGATTGACACTGCCAA+GGG + chr8_4:50233305-50233324 Msa1330920:CDS 50.0%
! AGGCTGTTGTCTAGGACATG+TGG + chr8_4:50233384-50233403 Msa1330920:exon 50.0%
!! GTACGAACGGGGTTGGTACT+TGG + chr8_4:50230491-50230510 Msa1330920:intron 55.0%
! GTAACGGGAAATGGAGGCAG+TGG + chr8_4:50230606-50230625 Msa1330920:intron 55.0%
GGAAAGCTGCTGCCGACAAA+TGG + chr8_4:50232769-50232788 Msa1330920:CDS 55.0%
CCCGCTGCTGTAAGATCTGT+TGG + chr8_4:50232867-50232886 Msa1330920:CDS 55.0%
GGGAATTCACCTTCGCACTC+TGG + chr8_4:50232897-50232916 Msa1330920:CDS 55.0%
GGGATCAACTTCGACCGGAT+CGG + chr8_4:50232935-50232954 Msa1330920:CDS 55.0%
ATCAACTTCGACCGGATCGG+TGG + chr8_4:50232938-50232957 Msa1330920:CDS 55.0%
CTTCACGAGTGCCAGTTCAC+TGG - chr8_4:50233021-50233040 None:intergenic 55.0%
CTTCAGGGCGGTCTCAACAT+CGG + chr8_4:50233131-50233150 Msa1330920:CDS 55.0%
TTCAGGGCGGTCTCAACATC+GGG + chr8_4:50233132-50233151 Msa1330920:CDS 55.0%
GGTACGTCGTGAATGCGGAA+AGG + chr8_4:50233232-50233251 Msa1330920:CDS 55.0%
GGTGGAGATTGACACTGCCA+AGG + chr8_4:50233304-50233323 Msa1330920:CDS 55.0%
TCTCTTGTGGCAGCTACCCT+TGG - chr8_4:50233324-50233343 None:intergenic 55.0%
AAGGGTAGCTGCCACAAGAG+AGG + chr8_4:50233323-50233342 Msa1330920:CDS 55.0%
AGGGTAGCTGCCACAAGAGA+GGG + chr8_4:50233324-50233343 Msa1330920:CDS 55.0%
GGGCGTGAAGACCCAATTGA+TGG + chr8_4:50233344-50233363 Msa1330920:CDS 55.0%
TCTTACAGCAGCGGGGGACT+GGG - chr8_4:50232862-50232881 None:intergenic 60.0%
ATCTTACAGCAGCGGGGGAC+TGG - chr8_4:50232863-50232882 None:intergenic 60.0%
TCAGCAGCACCAGAGTGCGA+AGG - chr8_4:50232909-50232928 None:intergenic 60.0%
GTCTGATCGGTCCACCGATC+CGG - chr8_4:50232952-50232971 None:intergenic 60.0%
TCAGGGCGGTCTCAACATCG+GGG + chr8_4:50233133-50233152 Msa1330920:CDS 60.0%
GGTCTTCACGCCCTCTCTTG+TGG - chr8_4:50233337-50233356 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 50228467 50233641 50228467 ID=Msa1330920;Name=Msa1330920
chr8_4 mRNA 50228467 50233641 50228467 ID=Msa1330920-mRNA-1;Parent=Msa1330920;Name=Msa1330920-mRNA-1;_AED=0.01;_eAED=0.01;_QI=524|1|1|1|1|1|2|244|279
chr8_4 exon 50228467 50229194 50228467 ID=Msa1330920-mRNA-1:exon:14637;Parent=Msa1330920-mRNA-1
chr8_4 exon 50232762 50233641 50232762 ID=Msa1330920-mRNA-1:exon:14638;Parent=Msa1330920-mRNA-1
chr8_4 five_prime_UTR 50228467 50228990 50228467 ID=Msa1330920-mRNA-1:five_prime_utr;Parent=Msa1330920-mRNA-1
chr8_4 CDS 50228991 50229194 50228991 ID=Msa1330920-mRNA-1:cds;Parent=Msa1330920-mRNA-1
chr8_4 CDS 50232762 50233397 50232762 ID=Msa1330920-mRNA-1:cds;Parent=Msa1330920-mRNA-1
chr8_4 three_prime_UTR 50233398 50233641 50233398 ID=Msa1330920-mRNA-1:three_prime_utr;Parent=Msa1330920-mRNA-1
Gene Sequence

>Msa1330920

ATGTCTAAGAGGTTGGCAGCAGCACCATTTTTGACCAAGACCTATGAGATGATTGATGATCCTCTCACAAATGATGTGATTTCTTGGGGTGAAAATGGCAACACTTTTGTTGTGGTGAAACAAGTTGAATTTTCAAGGGATTTGCTTCCAAAATATTTCAAGCACAACAATTTCTCAAGCTTTGTTCGTCAACTTAACACCTATGGGTTCCGGAAAGCTGCTGCCGACAAATGGGAATTCGCCCAAGAGAATTTTAAGAGAGGGGAGACCGAGCTGCTTCCGACAATCAAGCGTCGGAAGACCCAGTCCCCCGCTGCTGTAAGATCTGTTGGAGTTGGCGGGAATTCACCTTCGCACTCTGGTGCTGCTGAAGATATGGGATCAACTTCGACCGGATCGGTGGACCGATCAGACTTATCCATCGAGAACAAAAGACTCAAAATGGATAATGAAAAATTAACCAGTGAACTGGCACTCGTGAAGAAAAAGTGTGAAGAATTGCTTGCTTATCTTCAGGGTGATCTCAACATCGGGGCACTTGCAAAGAAAAAGTGTGAAGAATTGCTTGCTTATCTTCAGGGCGGTCTCAACATCGGGGCTGATGAAATTAACCGTATCCTTGGCAAAGGAACGAATGGGTCCAGCCATGATACGGATGATGATGATGACAATGTGGTACGTCGTGAATGCGGAAAGGGTATAAGACTGTTTGGGGTTTGGCTGAAGGAAGAAGAGGGGAAAGACAAGGTGGAGATTGACACTGCCAAGGGTAGCTGCCACAAGAGAGGGCGTGAAGACCCAATTGATGGTGCCAACAATGAGTTCAAGGCTGTTGTCTAG
Protein sequence

>Msa1330920

MSKRLAAAPFLTKTYEMIDDPLTNDVISWGENGNTFVVVKQVEFSRDLLPKYFKHNNFSSFVRQLNTYGFRKAAADKWEFAQENFKRGETELLPTIKRRKTQSPAAVRSVGVGGNSPSHSGAAEDMGSTSTGSVDRSDLSIENKRLKMDNEKLTSELALVKKKCEELLAYLQGDLNIGALAKKKCEELLAYLQGGLNIGADEINRILGKGTNGSSHDTDDDDDNVVRRECGKGIRLFGVWLKEEEGKDKVEIDTAKGSCHKRGREDPIDGANNEFKAVV*