AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1203850

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1203850 MtrunA17_Chr8g0375041 81.429 280 28 3 1 280 1 256 1.80e-164 456
Msa1203850 MtrunA17_Chr5g0402291 45.296 287 108 6 1 269 1 256 3.16e-71 221
Msa1203850 MtrunA17_Chr3g0134031 36.704 267 114 6 2 216 17 280 1.99e-48 164
Msa1203850 MtrunA17_Chr7g0257331 48.795 166 79 1 3 168 16 175 2.40e-47 158
Msa1203850 MtrunA17_Chr5g0397881 43.719 199 83 3 2 171 17 215 2.89e-47 161
Msa1203850 MtrunA17_Chr5g0441531 42.857 182 100 2 2 179 18 199 6.71e-45 152
Msa1203850 MtrunA17_Chr1g0203601 43.000 200 98 3 2 185 11 210 3.19e-42 147
Msa1203850 MtrunA17_Chr6g0472421 40.500 200 89 1 2 171 26 225 1.38e-41 146
Msa1203850 MtrunA17_Chr5g0410881 41.176 187 102 1 6 192 29 207 3.25e-41 148
Msa1203850 MtrunA17_Chr4g0039891 41.667 192 97 4 9 197 12 191 5.59e-41 147
Msa1203850 MtrunA17_Chr7g0260331 61.458 96 37 0 5 100 45 140 8.21e-37 134
Msa1203850 MtrunA17_Chr6g0467041 60.215 93 37 0 8 100 21 113 1.13e-36 132
Msa1203850 MtrunA17_Chr1g0204741 38.172 186 99 3 7 192 38 207 5.41e-36 131
Msa1203850 MtrunA17_Chr3g0135831 37.879 198 98 5 5 197 42 219 4.73e-35 129
Msa1203850 MtrunA17_Chr1g0185131 55.963 109 47 1 5 112 28 136 4.82e-35 129
Msa1203850 MtrunA17_Chr6g0485571 56.000 100 44 0 1 100 3 102 7.00e-35 128
Msa1203850 MtrunA17_Chr8g0392001 58.416 101 41 1 7 106 20 120 1.22e-34 128
Msa1203850 MtrunA17_Chr8g0379701 42.282 149 69 2 9 156 12 144 1.61e-34 129
Msa1203850 MtrunA17_Chr2g0284481 39.884 173 87 3 7 175 13 172 1.06e-33 126
Msa1203850 MtrunA17_Chr4g0071051 56.842 95 41 0 5 99 97 191 8.36e-33 124
Msa1203850 MtrunA17_Chr8g0378061 58.242 91 38 0 10 100 23 113 4.11e-32 123
Msa1203850 MtrunA17_Chr4g0047421 39.375 160 89 2 6 161 30 185 4.36e-32 117
Msa1203850 MtrunA17_Chr2g0330821 53.191 94 44 0 7 100 77 170 5.25e-29 113
Msa1203850 MtrunA17_Chr1g0179321 60.317 63 25 0 6 68 46 108 7.67e-24 93.2
Msa1203850 MtrunA17_Chr4g0023771 56.667 60 26 0 7 66 13 72 2.46e-18 78.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1203850 AT4G36990.1 43.678 261 115 6 2 248 7 249 2.86e-55 180
Msa1203850 AT1G46264.1 36.177 293 132 7 6 248 31 318 5.00e-46 158
Msa1203850 AT2G41690.1 45.810 179 85 3 6 172 37 215 1.83e-43 148
Msa1203850 AT4G11660.1 41.500 200 77 2 2 161 52 251 2.24e-42 149
Msa1203850 AT3G02990.1 42.105 190 93 4 6 192 20 195 1.25e-41 149
Msa1203850 AT1G32330.1 43.316 187 100 3 6 192 34 214 8.81e-41 147
Msa1203850 AT1G32330.2 43.316 187 100 3 6 192 34 214 8.96e-41 147
Msa1203850 AT5G62020.1 40.625 192 92 4 2 171 16 207 2.31e-40 142
Msa1203850 AT5G16820.1 41.327 196 87 5 6 192 24 200 3.14e-40 145
Msa1203850 AT5G16820.2 41.327 196 87 5 6 192 24 200 3.14e-40 145
Msa1203850 AT4G17750.1 37.788 217 125 3 7 219 50 260 4.55e-38 140
Msa1203850 AT3G51910.1 52.101 119 48 1 6 124 26 135 4.45e-37 132
Msa1203850 AT3G24520.1 42.169 166 75 4 8 171 16 162 6.81e-37 134
Msa1203850 AT2G26150.1 38.624 189 101 1 9 197 44 217 9.47e-37 134
Msa1203850 AT2G26150.4 38.624 189 101 1 9 197 44 217 9.47e-37 134
Msa1203850 AT3G22830.1 59.375 96 39 0 6 101 58 153 5.78e-35 130
Msa1203850 AT5G43840.1 38.122 181 95 2 3 183 13 176 2.10e-34 126
Msa1203850 AT3G63350.1 36.898 187 99 1 7 193 26 193 3.75e-34 125
Msa1203850 AT5G03720.2 60.638 94 37 0 8 101 54 147 6.45e-34 127
Msa1203850 AT5G03720.1 60.638 94 37 0 8 101 54 147 6.45e-34 127
Msa1203850 AT4G13980.1 41.718 163 74 2 10 172 24 165 1.09e-33 128
Msa1203850 AT1G67970.1 43.125 160 75 3 7 165 17 161 1.11e-32 123
Msa1203850 AT5G54070.1 55.435 92 41 0 8 99 70 161 2.65e-32 122
Msa1203850 AT5G45710.3 43.137 153 70 2 6 157 10 146 4.93e-31 118
Msa1203850 AT5G45710.1 43.137 153 70 2 6 157 10 146 4.93e-31 118
Msa1203850 AT4G18880.1 35.922 206 103 4 6 209 12 190 1.82e-29 115
Msa1203850 AT4G18870.1 39.560 91 55 0 6 96 143 233 5.28e-18 82.4
Msa1203850 AT4G18870.1 39.785 93 51 3 6 96 10 99 2.37e-14 72.0
Msa1203850 AT1G77570.1 37.931 87 51 2 10 93 27 113 8.43e-12 62.4

Find 102 sgRNAs with CRISPR-Local

Find 259 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTATTTATGTATTTATAAA+AGG 0.180298 8_1:+59038811 None:intergenic
AGGAAAATAAATAAAGAAAA+AGG 0.187830 8_1:+59038904 None:intergenic
CTCTGGTGCTGCTGAAGATA+TGG 0.236484 8_1:-59034777 Msa1203850:CDS
TTGTTGTGCTTGAAATATTT+TGG 0.239756 8_1:+59038555 None:intergenic
TTCCATAAGCTTTGGATTCA+TGG 0.249690 8_1:-59039116 Msa1203850:five_prime_UTR
ATTTCGTAGTTGTTTGGTTT+TGG 0.287663 8_1:-59034202 Msa1203850:three_prime_UTR
TCACAAATGATGTGATTTCT+TGG 0.292322 8_1:-59038638 Msa1203850:CDS
ATCCATGAATCCAAAGCTTA+TGG 0.293713 8_1:+59039114 None:intergenic
CGAGAACAAAAGACTCAAAA+TGG 0.305997 8_1:-59034711 Msa1203850:CDS
GTGATTTCTTGGGGTGAAAA+TGG 0.307729 8_1:-59038627 Msa1203850:CDS
ATTTGTCGGCAGCAGCTTTC+CGG 0.311222 8_1:+59034924 None:intergenic
CCCCTCTCTTAAAATTCTCT+TGG 0.321950 8_1:+59034891 None:intergenic
AAATCATAAAACAATACTTC+TGG 0.327276 8_1:+59039219 None:intergenic
TTTCAATTTCTCAGGGGTTC+CGG 0.336163 8_1:-59034943 Msa1203850:intron
TGTTCTCTGTTTAGAAGTTA+TGG 0.336664 8_1:-59039162 Msa1203850:five_prime_UTR
CACAAATGATGTGATTTCTT+GGG 0.344507 8_1:-59038637 Msa1203850:CDS
GAAAGGGTATAAGACTGTTT+GGG 0.345034 8_1:-59034439 Msa1203850:CDS
GTATAAGACTGTTTGGGGTT+TGG 0.352030 8_1:-59034433 Msa1203850:CDS
TTCAGGGCGGTCTCAACATC+GGG 0.365918 8_1:-59034559 Msa1203850:CDS
AGAATTGCTTGCTTATCTTC+AGG 0.367247 8_1:-59034639 Msa1203850:CDS
AGAATTGCTTGCTTATCTTC+AGG 0.372663 8_1:-59034576 Msa1203850:CDS
TCATTGTTGGCACCATCAAT+TGG 0.373020 8_1:+59034332 None:intergenic
TTATTCATTTCCATAAGCTT+TGG 0.373179 8_1:-59039124 Msa1203850:five_prime_UTR
GGAAAGGGTATAAGACTGTT+TGG 0.390575 8_1:-59034440 Msa1203850:CDS
ATACAAATTTCGTAGTTGTT+TGG 0.391325 8_1:-59034208 Msa1203850:three_prime_UTR
GGAAAGCTGCTGCCGACAAA+TGG 0.392444 8_1:-59034922 Msa1203850:CDS
TCTCTTGTGGCAGCTACCCT+TGG 0.404436 8_1:+59034367 None:intergenic
GTCTTCCGACGCTTGATTGT+CGG 0.414985 8_1:+59034854 None:intergenic
TTCAGGGTGATCTCAACATC+GGG 0.437971 8_1:-59034622 Msa1203850:CDS
GTCTGATCGGTCCACCGATC+CGG 0.438684 8_1:+59034742 None:intergenic
AGGATCATCAATCATCTCAT+AGG 0.440358 8_1:+59038662 None:intergenic
CCCGCTGCTGTAAGATCTGT+TGG 0.442824 8_1:-59034824 Msa1203850:CDS
CCCTCTCTTAAAATTCTCTT+GGG 0.443216 8_1:+59034892 None:intergenic
GAATTGCTTGCTTATCTTCA+GGG 0.443640 8_1:-59034638 Msa1203850:CDS
GAATTGCTTGCTTATCTTCA+GGG 0.444946 8_1:-59034575 Msa1203850:CDS
CAAAGTAGAATTTGTGAAGT+AGG 0.450996 8_1:-59038750 Msa1203850:five_prime_UTR
AAGTAGGTGAAGGGTAGATC+GGG 0.453594 8_1:-59038734 Msa1203850:five_prime_UTR
ATCATCATCCGTATCATGGC+TGG 0.456429 8_1:+59034493 None:intergenic
AACAGCCTTGAACTCATTGT+TGG 0.460694 8_1:+59034319 None:intergenic
CATTGTTGGCACCATCAATT+GGG 0.461669 8_1:+59034333 None:intergenic
GAAGTAGGTGAAGGGTAGAT+CGG 0.467714 8_1:-59038735 Msa1203850:five_prime_UTR
ATCAATCATCTCATAGGTCT+TGG 0.469811 8_1:+59038668 None:intergenic
GGGCGTGAAGACCCAATTGA+TGG 0.486085 8_1:-59034344 Msa1203850:CDS
TCGTTCCTTTGCCAAGGATA+CGG 0.487676 8_1:+59034522 None:intergenic
GATGAAATTAACCGTATCCT+TGG 0.490434 8_1:-59034533 Msa1203850:CDS
GAAAGCTGCTGCCGACAAAT+GGG 0.492919 8_1:-59034921 Msa1203850:CDS
CATCATCATCATCCGTATCA+TGG 0.496633 8_1:+59034489 None:intergenic
TTGGGCGAATTCCCATTTGT+CGG 0.497343 8_1:+59034910 None:intergenic
TCTGGTGCTGCTGAAGATAT+GGG 0.499437 8_1:-59034776 Msa1203850:CDS
CCAACAGATCTTACAGCAGC+GGG 0.502479 8_1:+59034824 None:intergenic
GTACGTCGTGAATGCGGAAA+GGG 0.504721 8_1:-59034455 Msa1203850:CDS
GCTGTAAGATCTGTTGGAGT+TGG 0.513039 8_1:-59034818 Msa1203850:CDS
GAAGAAAATGTCTAAGAGGT+TGG 0.514254 8_1:-59038709 Msa1203850:exon
GTTTGGCTGAAGGAAGAAGA+GGG 0.514660 8_1:-59034416 Msa1203850:CDS
TGAGTTCAAGGCTGTTGTCT+AGG 0.515335 8_1:-59034312 Msa1203850:exon
CTTCACGAGTGCCAGTTCAC+TGG 0.517956 8_1:+59034673 None:intergenic
TAAGATCTGTTGGAGTTGGC+GGG 0.518928 8_1:-59034814 Msa1203850:CDS
GGGAATTCACCTTCGCACTC+TGG 0.523578 8_1:-59034794 Msa1203850:CDS
ACCCATTCGTTCCTTTGCCA+AGG 0.525178 8_1:+59034516 None:intergenic
GGTCTTCACGCCCTCTCTTG+TGG 0.525936 8_1:+59034354 None:intergenic
GTAAGATCTGTTGGAGTTGG+CGG 0.525989 8_1:-59034815 Msa1203850:CDS
GAATTTGTGAAGTAGGTGAA+GGG 0.527424 8_1:-59038743 Msa1203850:five_prime_UTR
ATCCTTGGCAAAGGAACGAA+TGG 0.527436 8_1:-59034518 Msa1203850:CDS
CTTCAGGGCGGTCTCAACAT+CGG 0.528747 8_1:-59034560 Msa1203850:CDS
AGAATTTGTGAAGTAGGTGA+AGG 0.530681 8_1:-59038744 Msa1203850:five_prime_UTR
ACTGTTTGGGGTTTGGCTGA+AGG 0.533700 8_1:-59034426 Msa1203850:CDS
AGGGTAGCTGCCACAAGAGA+GGG 0.548965 8_1:-59034364 Msa1203850:CDS
AGAAGAGGGGAAAGACAAGG+TGG 0.549839 8_1:-59034402 Msa1203850:CDS
GAATGGGTCCAGCCATGATA+CGG 0.552219 8_1:-59034501 Msa1203850:CDS
GGGATCAACTTCGACCGGAT+CGG 0.553641 8_1:-59034756 Msa1203850:CDS
GGAAGAAGAAAATGTCTAAG+AGG 0.554539 8_1:-59038713 Msa1203850:exon
CTTGATTGTCGGAAGCAGCT+CGG 0.555478 8_1:+59034865 None:intergenic
TGGTGCCAACAATGAGTTCA+AGG 0.555667 8_1:-59034324 Msa1203850:CDS
TCCAACAGATCTTACAGCAG+CGG 0.556507 8_1:+59034823 None:intergenic
GTTGTCTAGGACATGTGGTA+AGG 0.558034 8_1:-59034299 Msa1203850:exon
AAGGGTAGCTGCCACAAGAG+AGG 0.563776 8_1:-59034365 Msa1203850:CDS
GGTACGTCGTGAATGCGGAA+AGG 0.565791 8_1:-59034456 Msa1203850:CDS
GATATGGGATCAACTTCGAC+CGG 0.569648 8_1:-59034761 Msa1203850:CDS
TCCTTGGCAAAGGAACGAAT+GGG 0.573236 8_1:-59034517 Msa1203850:CDS
GGAAGAAGAGGGGAAAGACA+AGG 0.573733 8_1:-59034405 Msa1203850:CDS
AAAGGGTATAAGACTGTTTG+GGG 0.582432 8_1:-59034438 Msa1203850:CDS
ATCAACTTCGACCGGATCGG+TGG 0.586784 8_1:-59034753 Msa1203850:CDS
ATTAACCGTATCCTTGGCAA+AGG 0.593236 8_1:-59034527 Msa1203850:CDS
CTTCAGGGTGATCTCAACAT+CGG 0.601478 8_1:-59034623 Msa1203850:CDS
GGTTTGGCTGAAGGAAGAAG+AGG 0.605675 8_1:-59034417 Msa1203850:CDS
TGCTTCCGACAATCAAGCGT+CGG 0.618599 8_1:-59034859 Msa1203850:CDS
GAAATCACATCATTTGTGAG+AGG 0.623568 8_1:+59038642 None:intergenic
GTATGTTTAATATGGTAACA+AGG 0.624294 8_1:+59038928 None:intergenic
GGTGGAGATTGACACTGCCA+AGG 0.626051 8_1:-59034384 Msa1203850:CDS
AACAGATCTTACAGCAGCGG+GGG 0.636718 8_1:+59034826 None:intergenic
AGGCTGTTGTCTAGGACATG+TGG 0.639094 8_1:-59034304 Msa1203850:exon
ACAAATGATGTGATTTCTTG+GGG 0.640243 8_1:-59038636 Msa1203850:CDS
GGTCAATGTTAAGAAGTGCA+AGG 0.644391 8_1:-59034235 Msa1203850:three_prime_UTR
TCTCGATGGATAAGTCTGAT+CGG 0.645977 8_1:+59034729 None:intergenic
TCAGCAGCACCAGAGTGCGA+AGG 0.648598 8_1:+59034785 None:intergenic
AATGTGGTACGTCGTGAATG+CGG 0.667673 8_1:-59034461 Msa1203850:CDS
TTTGGCTGAAGGAAGAAGAG+GGG 0.668209 8_1:-59034415 Msa1203850:CDS
GTGGAGATTGACACTGCCAA+GGG 0.681976 8_1:-59034383 Msa1203850:CDS
CAACAGATCTTACAGCAGCG+GGG 0.700402 8_1:+59034825 None:intergenic
TCAGGGCGGTCTCAACATCG+GGG 0.720922 8_1:-59034558 Msa1203850:CDS
TTGCTTGCTTATCTTCAGGG+CGG 0.721162 8_1:-59034572 Msa1203850:CDS
TCAGGGTGATCTCAACATCG+GGG 0.765373 8_1:-59034621 Msa1203850:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGTATTTATGTATTTATAAA+AGG + chr8_1:59034487-59034506 None:intergenic 10.0%
!! AAAAATAAAAACAAAACATT+TGG + chr8_1:59035529-59035548 None:intergenic 10.0%
!! TTATTGTAAATATACATTAA+TGG - chr8_1:59035914-59035933 Msa1203850:intron 10.0%
!!! TTATATATTTTTTTTTTGAC+TGG - chr8_1:59036152-59036171 Msa1203850:intron 10.0%
!!! ATAAATTTTTTGTTTTTTGA+AGG - chr8_1:59036335-59036354 Msa1203850:intron 10.0%
!! ATTCTAATTAAATTAATTGA+AGG + chr8_1:59036552-59036571 None:intergenic 10.0%
!! ATTTAATAATTAAAATGCAT+CGG - chr8_1:59036876-59036895 Msa1203850:intron 10.0%
!!! AATTATTTAACTTTATCATA+AGG - chr8_1:59037747-59037766 Msa1203850:intron 10.0%
!!! ATTATTTAACTTTATCATAA+GGG - chr8_1:59037748-59037767 Msa1203850:intron 10.0%
!! GAAAATAAATAAAGAAAAAG+GGG + chr8_1:59034392-59034411 None:intergenic 15.0%
!! GGAAAATAAATAAAGAAAAA+GGG + chr8_1:59034393-59034412 None:intergenic 15.0%
!! AGGAAAATAAATAAAGAAAA+AGG + chr8_1:59034394-59034413 None:intergenic 15.0%
!! TTAAAAAAGTCAAATGTATT+TGG + chr8_1:59035070-59035089 None:intergenic 15.0%
!! CAAAAAGAAAAGAAAAAAAA+AGG + chr8_1:59035681-59035700 None:intergenic 15.0%
!! AGAAAAATAAAATATCGAAA+AGG + chr8_1:59035771-59035790 None:intergenic 15.0%
!!! ATATACATTAATGGTTTTTA+TGG - chr8_1:59035923-59035942 Msa1203850:intron 15.0%
!! TTTAATTAATTGCTATGTAA+CGG - chr8_1:59036193-59036212 Msa1203850:intron 15.0%
!!! TTTCTACTTAATTTTAATTG+TGG - chr8_1:59036476-59036495 Msa1203850:intron 15.0%
!! ATTGAAGGTAAATTAAAAAA+CGG + chr8_1:59036537-59036556 None:intergenic 15.0%
!!! ACTATAGTAATTATTTTTTG+TGG + chr8_1:59036725-59036744 None:intergenic 15.0%
!! TAAACTATTAAATCGATTAA+AGG - chr8_1:59036838-59036857 Msa1203850:intron 15.0%
!! AAACTATTAAATCGATTAAA+GGG - chr8_1:59036839-59036858 Msa1203850:intron 15.0%
!!! ATTATCTGTTTTTTTTTTGA+AGG - chr8_1:59036941-59036960 Msa1203850:intron 15.0%
!! AAAAATAAAGAATTATCTGT+TGG - chr8_1:59036964-59036983 Msa1203850:intron 15.0%
!!! TTTATTCTCACAAATATTTT+TGG - chr8_1:59037334-59037353 Msa1203850:intron 15.0%
!!! TGTTTTTTCTACAATTTTAA+AGG - chr8_1:59037456-59037475 Msa1203850:intron 15.0%
!!! ACTTTATTTAAAAAGACTAT+CGG + chr8_1:59037852-59037871 None:intergenic 15.0%
!! AAATCATAAAACAATACTTC+TGG + chr8_1:59034079-59034098 None:intergenic 20.0%
!!! AGAAGAAGTTTTATTGTTAT+TGG + chr8_1:59034217-59034236 None:intergenic 20.0%
!!! AAAGTTTTTGTATGAACAAA+AGG + chr8_1:59034414-59034433 None:intergenic 20.0%
!! GTTCATACAAAAACTTTATA+AGG - chr8_1:59034417-59034436 Msa1203850:CDS 20.0%
!! GAAAATAAAACCATAAAAGA+TGG + chr8_1:59034814-59034833 None:intergenic 20.0%
!!! TAAGAGTTTTGACTTAATAA+TGG + chr8_1:59035196-59035215 None:intergenic 20.0%
!!! GTTTATTAGTTTATGCTTAA+TGG - chr8_1:59035255-59035274 Msa1203850:intron 20.0%
!! AGACTTTATTACATATGAAT+TGG - chr8_1:59035304-59035323 Msa1203850:intron 20.0%
!! TATTATTATGATCCTTCAAT+TGG + chr8_1:59035378-59035397 None:intergenic 20.0%
!! TTGAAGGATCATAATAATAT+TGG - chr8_1:59035379-59035398 Msa1203850:intron 20.0%
!!! TGTTTTATTACTTTTATGTG+TGG - chr8_1:59035625-59035644 Msa1203850:intron 20.0%
!! TTAATTAATTGCTATGTAAC+GGG - chr8_1:59036194-59036213 Msa1203850:intron 20.0%
!!! AAATATTTTTGAACAACTTC+CGG + chr8_1:59036263-59036282 None:intergenic 20.0%
!! TTGAAGGTAAATTAAAAAAC+GGG + chr8_1:59036536-59036555 None:intergenic 20.0%
!!! ACTTACATCATGAAAATTTT+CGG - chr8_1:59037212-59037231 Msa1203850:intron 20.0%
!!! AACAAGCTTTAATGAAATTT+AGG + chr8_1:59037243-59037262 None:intergenic 20.0%
!!! TTTGAAATGTTATATACACA+AGG + chr8_1:59037282-59037301 None:intergenic 20.0%
!!! ATTTTTTTCTTCCAATTTAG+TGG - chr8_1:59037594-59037613 Msa1203850:intron 20.0%
!! TACACTATTGTAAATTTACA+TGG - chr8_1:59037688-59037707 Msa1203850:intron 20.0%
!!! TATATCCTATTATCATTTTG+AGG - chr8_1:59037923-59037942 Msa1203850:intron 20.0%
!! AACAATACACACAAAATATT+AGG - chr8_1:59037951-59037970 Msa1203850:intron 20.0%
!! CAATAATATTGTGAGATTTA+CGG - chr8_1:59038050-59038069 Msa1203850:intron 20.0%
!! TAATATCATATTGCATGTTA+GGG + chr8_1:59038227-59038246 None:intergenic 20.0%
!! ATAATATCATATTGCATGTT+AGG + chr8_1:59038228-59038247 None:intergenic 20.0%
!!! AATTATTTTCCTAGTTTTTG+TGG - chr8_1:59039186-59039205 Msa1203850:five_prime_UTR 20.0%
! TTATTCATTTCCATAAGCTT+TGG - chr8_1:59034171-59034190 Msa1203850:three_prime_UTR 25.0%
! CAAGGAATTGAAAAAAGTTT+AGG + chr8_1:59034352-59034371 None:intergenic 25.0%
! GTATGTTTAATATGGTAACA+AGG + chr8_1:59034370-59034389 None:intergenic 25.0%
!! AAAAAGGGGTATGTTTAATA+TGG + chr8_1:59034378-59034397 None:intergenic 25.0%
!!! TGAAACAAGTTGAATTTTCA+AGG - chr8_1:59034708-59034727 Msa1203850:CDS 25.0%
!!! GAAACAAGTTGAATTTTCAA+GGG - chr8_1:59034709-59034728 Msa1203850:CDS 25.0%
!! TTGTTGTGCTTGAAATATTT+TGG + chr8_1:59034743-59034762 None:intergenic 25.0%
!!! CTAGTTTTAAAACCGATAAA+AGG - chr8_1:59035009-59035028 Msa1203850:intron 25.0%
!! TGAACTCATATTAGTATTGA+TGG - chr8_1:59035139-59035158 Msa1203850:intron 25.0%
! TTGGTAAATTTATTTGAGTG+TGG - chr8_1:59035323-59035342 Msa1203850:intron 25.0%
! TGGTAAATTTATTTGAGTGT+GGG - chr8_1:59035324-59035343 Msa1203850:intron 25.0%
!! TTGCCAAATAAATCCATTTT+TGG - chr8_1:59036503-59036522 Msa1203850:intron 25.0%
!! CAACCAAAAATGGATTTATT+TGG + chr8_1:59036509-59036528 None:intergenic 25.0%
!!! CAAATAAATCCATTTTTGGT+TGG - chr8_1:59036507-59036526 Msa1203850:intron 25.0%
! TGAAGGTAAATTAAAAAACG+GGG + chr8_1:59036535-59036554 None:intergenic 25.0%
! ATAAACTTGAGGATTAAGAA+AGG - chr8_1:59037099-59037118 Msa1203850:intron 25.0%
! TTACAATAAAGTGTGCAAAA+AGG - chr8_1:59037167-59037186 Msa1203850:intron 25.0%
! TGTCATATAAAATGAGTTTG+CGG + chr8_1:59037547-59037566 None:intergenic 25.0%
! ATTTACGTAAACCACTAAAT+TGG + chr8_1:59037608-59037627 None:intergenic 25.0%
! TGTTTGTAGTGTATCTAATT+TGG - chr8_1:59037633-59037652 Msa1203850:intron 25.0%
! TAAGGGTAGTTTACTTATTT+CGG - chr8_1:59037765-59037784 Msa1203850:intron 25.0%
! AAATATTCACCAACTTTATG+CGG + chr8_1:59037829-59037848 None:intergenic 25.0%
! ATAATCACAGATAATGAGTT+GGG - chr8_1:59037899-59037918 Msa1203850:intron 25.0%
! GGTGTGAATTATAAATTCAT+TGG - chr8_1:59038187-59038206 Msa1203850:intron 25.0%
! ATCTTGAATTTCAATTTCTC+AGG - chr8_1:59038344-59038363 Msa1203850:intron 25.0%
! TCTTGAATTTCAATTTCTCA+GGG - chr8_1:59038345-59038364 Msa1203850:intron 25.0%
!!! GAGAACTTTTTAGTTTACAT+TGG - chr8_1:59039039-59039058 Msa1203850:five_prime_UTR 25.0%
! ATACAAATTTCGTAGTTGTT+TGG - chr8_1:59039087-59039106 Msa1203850:five_prime_UTR 25.0%
ACAAAGAGAGAGAGAAAAAA+AGG + chr8_1:59034116-59034135 None:intergenic 30.0%
TGTTCTCTGTTTAGAAGTTA+TGG - chr8_1:59034133-59034152 Msa1203850:three_prime_UTR 30.0%
! CATTTTCGTTTCTTTCTCTT+TGG - chr8_1:59034270-59034289 Msa1203850:three_prime_UTR 30.0%
CAAAGTAGAATTTGTGAAGT+AGG - chr8_1:59034545-59034564 Msa1203850:CDS 30.0%
TCACAAATGATGTGATTTCT+TGG - chr8_1:59034657-59034676 Msa1203850:CDS 30.0%
CACAAATGATGTGATTTCTT+GGG - chr8_1:59034658-59034677 Msa1203850:CDS 30.0%
ACAAATGATGTGATTTCTTG+GGG - chr8_1:59034659-59034678 Msa1203850:CDS 30.0%
! TTTAAAACCGATAAAAGGAC+CGG - chr8_1:59035014-59035033 Msa1203850:intron 30.0%
ACAATAAACATTTGACATGC+CGG + chr8_1:59035036-59035055 None:intergenic 30.0%
!! ACTCATATTAGTATTGATGG+TGG - chr8_1:59035142-59035161 Msa1203850:intron 30.0%
GGTAAATTTATTTGAGTGTG+GGG - chr8_1:59035325-59035344 Msa1203850:intron 30.0%
ACGTTGAATGAAAATTAGAG+TGG - chr8_1:59035407-59035426 Msa1203850:intron 30.0%
CGTTGAATGAAAATTAGAGT+GGG - chr8_1:59035408-59035427 Msa1203850:intron 30.0%
!! ACAAAACATTTGGTGTGAAA+AGG + chr8_1:59035519-59035538 None:intergenic 30.0%
!!! TTTTTTTAAGCAGACACATG+TGG + chr8_1:59035586-59035605 None:intergenic 30.0%
! AGATAGTGCTATAGAACTTT+TGG - chr8_1:59035703-59035722 Msa1203850:intron 30.0%
ACAATAATCTAGTCTACATG+CGG + chr8_1:59035901-59035920 None:intergenic 30.0%
TTGTCTTGTATTTGTACGAA+CGG - chr8_1:59036081-59036100 Msa1203850:intron 30.0%
!!! AGTTAGTTCTATCTTTTGAG+TGG - chr8_1:59036371-59036390 Msa1203850:intron 30.0%
!!! GTTAGTTCTATCTTTTGAGT+GGG - chr8_1:59036372-59036391 Msa1203850:intron 30.0%
TCAGTATATACTTTAGTCCT+TGG - chr8_1:59036618-59036637 Msa1203850:intron 30.0%
ATATACTTTAGTCCTTGGTA+TGG - chr8_1:59036623-59036642 Msa1203850:intron 30.0%
TCGAAATTGTCTTGATCAAA+AGG - chr8_1:59037073-59037092 Msa1203850:intron 30.0%
!! TCAAAAGGTTGATAAACTTG+AGG - chr8_1:59037088-59037107 Msa1203850:intron 30.0%
TAGAGTGAGAGATAAAAACA+GGG + chr8_1:59037306-59037325 None:intergenic 30.0%
TTAGAGTGAGAGATAAAAAC+AGG + chr8_1:59037307-59037326 None:intergenic 30.0%
! ACTTATTTCGGTGTGTAATT+AGG - chr8_1:59037777-59037796 Msa1203850:intron 30.0%
! GTGTGTAATTAGGTGTTTTT+CGG - chr8_1:59037787-59037806 Msa1203850:intron 30.0%
! TGTGTAATTAGGTGTTTTTC+GGG - chr8_1:59037788-59037807 Msa1203850:intron 30.0%
TAGAAAAATCCGCATAAAGT+TGG - chr8_1:59037817-59037836 Msa1203850:intron 30.0%
CATAATCACAGATAATGAGT+TGG - chr8_1:59037898-59037917 Msa1203850:intron 30.0%
!!! TCCTATTATCATTTTGAGGT+CGG - chr8_1:59037927-59037946 Msa1203850:intron 30.0%
! ACTAAACCGACTTTAATCAT+AGG - chr8_1:59038120-59038139 Msa1203850:intron 30.0%
AGATCACCTATGATTAAAGT+CGG + chr8_1:59038129-59038148 None:intergenic 30.0%
! ATCACATGATATCTAGTCTT+TGG - chr8_1:59038166-59038185 Msa1203850:intron 30.0%
GCATATAATAAGTAGCATTG+AGG + chr8_1:59038276-59038295 None:intergenic 30.0%
CTTGAATTTCAATTTCTCAG+GGG - chr8_1:59038346-59038365 Msa1203850:intron 30.0%
TGAAAAATTAACCAGTGAAC+TGG - chr8_1:59038611-59038630 Msa1203850:CDS 30.0%
!! ATTTCGTAGTTGTTTGGTTT+TGG - chr8_1:59039093-59039112 Msa1203850:five_prime_UTR 30.0%
!!! AGTTTTATTGATCTGCTTGT+AGG - chr8_1:59039163-59039182 Msa1203850:five_prime_UTR 30.0%
!!! ATGAAGACGATGTTTTGAAA+TGG - chr8_1:59039211-59039230 Msa1203850:five_prime_UTR 30.0%
!! TTCCATAAGCTTTGGATTCA+TGG - chr8_1:59034179-59034198 Msa1203850:three_prime_UTR 35.0%
ATCCATGAATCCAAAGCTTA+TGG + chr8_1:59034184-59034203 None:intergenic 35.0%
!!! TTCTCTTTGGCTTTTATTGC+TGG - chr8_1:59034283-59034302 Msa1203850:three_prime_UTR 35.0%
!!! TCTCTTTGGCTTTTATTGCT+GGG - chr8_1:59034284-59034303 Msa1203850:three_prime_UTR 35.0%
AGAATTTGTGAAGTAGGTGA+AGG - chr8_1:59034551-59034570 Msa1203850:CDS 35.0%
GAATTTGTGAAGTAGGTGAA+GGG - chr8_1:59034552-59034571 Msa1203850:CDS 35.0%
GGAAGAAGAAAATGTCTAAG+AGG - chr8_1:59034582-59034601 Msa1203850:CDS 35.0%
GAAGAAAATGTCTAAGAGGT+TGG - chr8_1:59034586-59034605 Msa1203850:CDS 35.0%
TCATAGGTCTTGGTCAAAAA+TGG + chr8_1:59034620-59034639 None:intergenic 35.0%
ATCAATCATCTCATAGGTCT+TGG + chr8_1:59034630-59034649 None:intergenic 35.0%
AGGATCATCAATCATCTCAT+AGG + chr8_1:59034636-59034655 None:intergenic 35.0%
GAAATCACATCATTTGTGAG+AGG + chr8_1:59034656-59034675 None:intergenic 35.0%
! AAATGGCAACACTTTTGTTG+TGG - chr8_1:59034685-59034704 Msa1203850:CDS 35.0%
ATGGAACAAGACACTTACAT+AGG + chr8_1:59034795-59034814 None:intergenic 35.0%
!! GTGTCTTGTTCCATCTTTTA+TGG - chr8_1:59034801-59034820 Msa1203850:CDS 35.0%
AATTTATTTGAGTGTGGGGT+AGG - chr8_1:59035329-59035348 Msa1203850:intron 35.0%
ATTTATTTGAGTGTGGGGTA+GGG - chr8_1:59035330-59035349 Msa1203850:intron 35.0%
CACATTACGTAGGATAGAAT+TGG - chr8_1:59035434-59035453 Msa1203850:intron 35.0%
!!! CGTAGTGTTTTGCTATTTCT+TGG - chr8_1:59035551-59035570 Msa1203850:intron 35.0%
! AGTGCTATAGAACTTTTGGT+AGG - chr8_1:59035707-59035726 Msa1203850:intron 35.0%
TGTCTTGTATTTGTACGAAC+GGG - chr8_1:59036082-59036101 Msa1203850:intron 35.0%
! AATTGCTATGTAACGGGAAA+TGG - chr8_1:59036200-59036219 Msa1203850:intron 35.0%
TTGAGGATTAAGAAAGGATG+TGG - chr8_1:59037105-59037124 Msa1203850:intron 35.0%
ACCGACCTCAAAATGATAAT+AGG + chr8_1:59037931-59037950 None:intergenic 35.0%
CCCTCTCTTAAAATTCTCTT+GGG + chr8_1:59038406-59038425 None:intergenic 35.0%
!! CCCAAGAGAATTTTAAGAGA+GGG - chr8_1:59038403-59038422 Msa1203850:intron 35.0%
!! CCAAGAGAATTTTAAGAGAG+GGG - chr8_1:59038404-59038423 Msa1203850:intron 35.0%
! TTTGAGTCTTTTGTTCTCGA+TGG + chr8_1:59038583-59038602 None:intergenic 35.0%
CGAGAACAAAAGACTCAAAA+TGG - chr8_1:59038584-59038603 Msa1203850:CDS 35.0%
AGAATTGCTTGCTTATCTTC+AGG - chr8_1:59038656-59038675 Msa1203850:CDS 35.0%
GAATTGCTTGCTTATCTTCA+GGG - chr8_1:59038657-59038676 Msa1203850:CDS 35.0%
AGAATTGCTTGCTTATCTTC+AGG - chr8_1:59038656-59038675 Msa1203850:CDS 35.0%
GAATTGCTTGCTTATCTTCA+GGG - chr8_1:59038657-59038676 Msa1203850:CDS 35.0%
GATGAAATTAACCGTATCCT+TGG - chr8_1:59038762-59038781 Msa1203850:five_prime_UTR 35.0%
! TGATGATGATGATGACAATG+TGG - chr8_1:59038818-59038837 Msa1203850:five_prime_UTR 35.0%
! GAAAGGGTATAAGACTGTTT+GGG - chr8_1:59038856-59038875 Msa1203850:five_prime_UTR 35.0%
! AAAGGGTATAAGACTGTTTG+GGG - chr8_1:59038857-59038876 Msa1203850:five_prime_UTR 35.0%
! GACTTTTACACAGCTATGAT+CGG - chr8_1:59039137-59039156 Msa1203850:five_prime_UTR 35.0%
TCTTCATTGCCACAAAAACT+AGG + chr8_1:59039198-59039217 None:intergenic 35.0%
!! TTGGCTTTTATTGCTGGGAT+TGG - chr8_1:59034289-59034308 Msa1203850:three_prime_UTR 40.0%
! TGGCTTTTATTGCTGGGATT+GGG - chr8_1:59034290-59034309 Msa1203850:three_prime_UTR 40.0%
GTGATTTCTTGGGGTGAAAA+TGG - chr8_1:59034668-59034687 Msa1203850:CDS 40.0%
!! GTATTGATGGTGGATCACTT+AGG - chr8_1:59035152-59035171 Msa1203850:intron 40.0%
TTTATTTGAGTGTGGGGTAG+GGG - chr8_1:59035331-59035350 Msa1203850:intron 40.0%
TACGTGGAACTTCCAATTGA+AGG - chr8_1:59035363-59035382 Msa1203850:intron 40.0%
! GCTATAGAACTTTTGGTAGG+TGG - chr8_1:59035710-59035729 Msa1203850:intron 40.0%
! TAGAACTTTTGGTAGGTGGA+TGG - chr8_1:59035714-59035733 Msa1203850:intron 40.0%
GTCTTGTATTTGTACGAACG+GGG - chr8_1:59036083-59036102 Msa1203850:intron 40.0%
TGAACAACTTCCGGATAAGT+TGG + chr8_1:59036254-59036273 None:intergenic 40.0%
AGCTAAGATCTTCCATACCA+AGG + chr8_1:59036638-59036657 None:intergenic 40.0%
GAAAGGATGTGGCTTTCTTA+AGG - chr8_1:59037116-59037135 Msa1203850:intron 40.0%
TTTCAATTTCTCAGGGGTTC+CGG - chr8_1:59038352-59038371 Msa1203850:intron 40.0%
!! GCCCAAGAGAATTTTAAGAG+AGG - chr8_1:59038402-59038421 Msa1203850:intron 40.0%
CCCCTCTCTTAAAATTCTCT+TGG + chr8_1:59038407-59038426 None:intergenic 40.0%
TCTCGATGGATAAGTCTGAT+CGG + chr8_1:59038569-59038588 None:intergenic 40.0%
ATTAACCGTATCCTTGGCAA+AGG - chr8_1:59038768-59038787 Msa1203850:five_prime_UTR 40.0%
CATCATCATCATCCGTATCA+TGG + chr8_1:59038809-59038828 None:intergenic 40.0%
! GGAAAGGGTATAAGACTGTT+TGG - chr8_1:59038855-59038874 Msa1203850:five_prime_UTR 40.0%
! GTATAAGACTGTTTGGGGTT+TGG - chr8_1:59038862-59038881 Msa1203850:five_prime_UTR 40.0%
CATTGTTGGCACCATCAATT+GGG + chr8_1:59038965-59038984 None:intergenic 40.0%
TCATTGTTGGCACCATCAAT+TGG + chr8_1:59038966-59038985 None:intergenic 40.0%
AACAGCCTTGAACTCATTGT+TGG + chr8_1:59038979-59038998 None:intergenic 40.0%
! GGTCAATGTTAAGAAGTGCA+AGG - chr8_1:59039060-59039079 Msa1203850:five_prime_UTR 40.0%
GAAGTAGGTGAAGGGTAGAT+CGG - chr8_1:59034560-59034579 Msa1203850:CDS 45.0%
AAGTAGGTGAAGGGTAGATC+GGG - chr8_1:59034561-59034580 Msa1203850:CDS 45.0%
! TGACATGCCGGTCCTTTTAT+CGG + chr8_1:59035024-59035043 None:intergenic 45.0%
!! GATGGTGGATCACTTAGGAA+CGG - chr8_1:59035157-59035176 Msa1203850:intron 45.0%
!! ATGGTGGATCACTTAGGAAC+GGG - chr8_1:59035158-59035177 Msa1203850:intron 45.0%
! GTAGGGGCTAGAATTTTACG+TGG - chr8_1:59035347-59035366 Msa1203850:intron 45.0%
! GAGTGGGTTTCACATTACGT+AGG - chr8_1:59035424-59035443 Msa1203850:intron 45.0%
TGTATTTGTACGAACGGGGT+TGG - chr8_1:59036087-59036106 Msa1203850:intron 45.0%
! TGCTATGTAACGGGAAATGG+AGG - chr8_1:59036203-59036222 Msa1203850:intron 45.0%
CACCACTCTACCAACTTATC+CGG - chr8_1:59036241-59036260 Msa1203850:intron 45.0%
!! TTCCGGATAAGTTGGTAGAG+TGG + chr8_1:59036246-59036265 None:intergenic 45.0%
AACGGGGAACCAACCAAAAA+TGG + chr8_1:59036519-59036538 None:intergenic 45.0%
TTGGGCGAATTCCCATTTGT+CGG + chr8_1:59038388-59038407 None:intergenic 45.0%
TCCAACAGATCTTACAGCAG+CGG + chr8_1:59038475-59038494 None:intergenic 45.0%
GCTGTAAGATCTGTTGGAGT+TGG - chr8_1:59038477-59038496 Msa1203850:intron 45.0%
GTAAGATCTGTTGGAGTTGG+CGG - chr8_1:59038480-59038499 Msa1203850:intron 45.0%
TAAGATCTGTTGGAGTTGGC+GGG - chr8_1:59038481-59038500 Msa1203850:intron 45.0%
!! TCTGGTGCTGCTGAAGATAT+GGG - chr8_1:59038519-59038538 Msa1203850:intron 45.0%
GATATGGGATCAACTTCGAC+CGG - chr8_1:59038534-59038553 Msa1203850:CDS 45.0%
CTTCAGGGTGATCTCAACAT+CGG - chr8_1:59038672-59038691 Msa1203850:CDS 45.0%
TTCAGGGTGATCTCAACATC+GGG - chr8_1:59038673-59038692 Msa1203850:CDS 45.0%
TTGCTTGCTTATCTTCAGGG+CGG - chr8_1:59038660-59038679 Msa1203850:CDS 45.0%
TCGTTCCTTTGCCAAGGATA+CGG + chr8_1:59038776-59038795 None:intergenic 45.0%
ATCCTTGGCAAAGGAACGAA+TGG - chr8_1:59038777-59038796 Msa1203850:five_prime_UTR 45.0%
TCCTTGGCAAAGGAACGAAT+GGG - chr8_1:59038778-59038797 Msa1203850:five_prime_UTR 45.0%
ATCATCATCCGTATCATGGC+TGG + chr8_1:59038805-59038824 None:intergenic 45.0%
AATGTGGTACGTCGTGAATG+CGG - chr8_1:59038834-59038853 Msa1203850:five_prime_UTR 45.0%
GTTTGGCTGAAGGAAGAAGA+GGG - chr8_1:59038879-59038898 Msa1203850:five_prime_UTR 45.0%
TTTGGCTGAAGGAAGAAGAG+GGG - chr8_1:59038880-59038899 Msa1203850:five_prime_UTR 45.0%
! TGGTGCCAACAATGAGTTCA+AGG - chr8_1:59038971-59038990 Msa1203850:five_prime_UTR 45.0%
TGAGTTCAAGGCTGTTGTCT+AGG - chr8_1:59038983-59039002 Msa1203850:five_prime_UTR 45.0%
! GTTGTCTAGGACATGTGGTA+AGG - chr8_1:59038996-59039015 Msa1203850:five_prime_UTR 45.0%
!! AATAGTTTAATTAATTTAAA+AGG + chr8_1:59036827-59036846 None:intergenic 5.0%
!! CGGATAAGTTGGTAGAGTGG+TGG + chr8_1:59036243-59036262 None:intergenic 50.0%
ATTTGTCGGCAGCAGCTTTC+CGG + chr8_1:59038374-59038393 None:intergenic 50.0%
GAAAGCTGCTGCCGACAAAT+GGG - chr8_1:59038374-59038393 Msa1203850:intron 50.0%
CTTGATTGTCGGAAGCAGCT+CGG + chr8_1:59038433-59038452 None:intergenic 50.0%
TGCTTCCGACAATCAAGCGT+CGG - chr8_1:59038436-59038455 Msa1203850:intron 50.0%
GTCTTCCGACGCTTGATTGT+CGG + chr8_1:59038444-59038463 None:intergenic 50.0%
AACAGATCTTACAGCAGCGG+GGG + chr8_1:59038472-59038491 None:intergenic 50.0%
CAACAGATCTTACAGCAGCG+GGG + chr8_1:59038473-59038492 None:intergenic 50.0%
CCAACAGATCTTACAGCAGC+GGG + chr8_1:59038474-59038493 None:intergenic 50.0%
!! CTCTGGTGCTGCTGAAGATA+TGG - chr8_1:59038518-59038537 Msa1203850:intron 50.0%
TCAGGGTGATCTCAACATCG+GGG - chr8_1:59038674-59038693 Msa1203850:CDS 50.0%
ACCCATTCGTTCCTTTGCCA+AGG + chr8_1:59038782-59038801 None:intergenic 50.0%
GAATGGGTCCAGCCATGATA+CGG - chr8_1:59038794-59038813 Msa1203850:five_prime_UTR 50.0%
GTACGTCGTGAATGCGGAAA+GGG - chr8_1:59038840-59038859 Msa1203850:five_prime_UTR 50.0%
! ACTGTTTGGGGTTTGGCTGA+AGG - chr8_1:59038869-59038888 Msa1203850:five_prime_UTR 50.0%
GGTTTGGCTGAAGGAAGAAG+AGG - chr8_1:59038878-59038897 Msa1203850:five_prime_UTR 50.0%
GGAAGAAGAGGGGAAAGACA+AGG - chr8_1:59038890-59038909 Msa1203850:five_prime_UTR 50.0%
AGAAGAGGGGAAAGACAAGG+TGG - chr8_1:59038893-59038912 Msa1203850:five_prime_UTR 50.0%
GTGGAGATTGACACTGCCAA+GGG - chr8_1:59038912-59038931 Msa1203850:five_prime_UTR 50.0%
! AGGCTGTTGTCTAGGACATG+TGG - chr8_1:59038991-59039010 Msa1203850:five_prime_UTR 50.0%
!! GTACGAACGGGGTTGGTACT+TGG - chr8_1:59036094-59036113 Msa1203850:intron 55.0%
! GTAACGGGAAATGGAGGCAG+TGG - chr8_1:59036209-59036228 Msa1203850:intron 55.0%
GGAAAGCTGCTGCCGACAAA+TGG - chr8_1:59038373-59038392 Msa1203850:intron 55.0%
CCCGCTGCTGTAAGATCTGT+TGG - chr8_1:59038471-59038490 Msa1203850:intron 55.0%
GGGAATTCACCTTCGCACTC+TGG - chr8_1:59038501-59038520 Msa1203850:intron 55.0%
GGGATCAACTTCGACCGGAT+CGG - chr8_1:59038539-59038558 Msa1203850:CDS 55.0%
ATCAACTTCGACCGGATCGG+TGG - chr8_1:59038542-59038561 Msa1203850:CDS 55.0%
CTTCACGAGTGCCAGTTCAC+TGG + chr8_1:59038625-59038644 None:intergenic 55.0%
CTTCAGGGCGGTCTCAACAT+CGG - chr8_1:59038735-59038754 Msa1203850:five_prime_UTR 55.0%
TTCAGGGCGGTCTCAACATC+GGG - chr8_1:59038736-59038755 Msa1203850:five_prime_UTR 55.0%
GGTACGTCGTGAATGCGGAA+AGG - chr8_1:59038839-59038858 Msa1203850:five_prime_UTR 55.0%
GGTGGAGATTGACACTGCCA+AGG - chr8_1:59038911-59038930 Msa1203850:five_prime_UTR 55.0%
TCTCTTGTGGCAGCTACCCT+TGG + chr8_1:59038931-59038950 None:intergenic 55.0%
AAGGGTAGCTGCCACAAGAG+AGG - chr8_1:59038930-59038949 Msa1203850:five_prime_UTR 55.0%
AGGGTAGCTGCCACAAGAGA+GGG - chr8_1:59038931-59038950 Msa1203850:five_prime_UTR 55.0%
GGGCGTGAAGACCCAATTGA+TGG - chr8_1:59038951-59038970 Msa1203850:five_prime_UTR 55.0%
TCTTACAGCAGCGGGGGACT+GGG + chr8_1:59038466-59038485 None:intergenic 60.0%
ATCTTACAGCAGCGGGGGAC+TGG + chr8_1:59038467-59038486 None:intergenic 60.0%
TCAGCAGCACCAGAGTGCGA+AGG + chr8_1:59038513-59038532 None:intergenic 60.0%
GTCTGATCGGTCCACCGATC+CGG + chr8_1:59038556-59038575 None:intergenic 60.0%
TCAGGGCGGTCTCAACATCG+GGG - chr8_1:59038737-59038756 Msa1203850:five_prime_UTR 60.0%
GGTCTTCACGCCCTCTCTTG+TGG + chr8_1:59038944-59038963 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 59034069 59039248 59034069 ID=Msa1203850;Name=Msa1203850
chr8_1 mRNA 59034069 59039248 59034069 ID=Msa1203850-mRNA-1;Parent=Msa1203850;Name=Msa1203850-mRNA-1;_AED=0.01;_eAED=0.01;_QI=524|1|1|1|1|1|2|244|280
chr8_1 exon 59034069 59034951 59034069 ID=Msa1203850-mRNA-1:exon:19081;Parent=Msa1203850-mRNA-1
chr8_1 exon 59038521 59039248 59038521 ID=Msa1203850-mRNA-1:exon:19080;Parent=Msa1203850-mRNA-1
chr8_1 five_prime_UTR 59038725 59039248 59038725 ID=Msa1203850-mRNA-1:five_prime_utr;Parent=Msa1203850-mRNA-1
chr8_1 CDS 59038521 59038724 59038521 ID=Msa1203850-mRNA-1:cds;Parent=Msa1203850-mRNA-1
chr8_1 CDS 59034313 59034951 59034313 ID=Msa1203850-mRNA-1:cds;Parent=Msa1203850-mRNA-1
chr8_1 three_prime_UTR 59034069 59034312 59034069 ID=Msa1203850-mRNA-1:three_prime_utr;Parent=Msa1203850-mRNA-1
Gene Sequence

>Msa1203850

ATGTCTAAGAGGTTGGCAGCAGCACCATTTTTGACCAAGACCTATGAGATGATTGATGATCCTCTCACAAATGATGTGATTTCTTGGGGTGAAAATGGCAACACTTTTGTTGTGGTGAAACAAGTTGAATTTTCAAGGGATTTGCTTCCAAAATATTTCAAGCACAACAATTTCTCAAGCTTTGTTCGTCAACTTAACACCTATGGGTTCCGGAAAGCTGCTGCCGACAAATGGGAATTCGCCCAAGAGAATTTTAAGAGAGGGGAGACCGAGCTGCTTCCGACAATCAAGCGTCGGAAGACCCAGTCCCCCGCTGCTGTAAGATCTGTTGGAGTTGGCGGGAATTCACCTTCGCACTCTGGTGCTGCTGAAGATATGGGATCAACTTCGACCGGATCGGTGGACCGATCAGACTTATCCATCGAGAACAAAAGACTCAAAATGGATAATGAAAAATTAACCAGTGAACTGGCACTCGTGAAGAAAAAGTGTGAAGAATTGCTTGCTTATCTTCAGGGTGATCTCAACATCGGGGCACTTGCAAAGAAAAAGTGTGAAGAATTGCTTGCTTATCTTCAGGGCGGTCTCAACATCGGGGCTGATGAAATTAACCGTATCCTTGGCAAAGGAACGAATGGGTCCAGCCATGATACGGATGATGATGATGATGACAATGTGGTACGTCGTGAATGCGGAAAGGGTATAAGACTGTTTGGGGTTTGGCTGAAGGAAGAAGAGGGGAAAGACAAGGTGGAGATTGACACTGCCAAGGGTAGCTGCCACAAGAGAGGGCGTGAAGACCCAATTGATGGTGCCAACAATGAGTTCAAGGCTGTTGTCTAG
Protein sequence

>Msa1203850

MSKRLAAAPFLTKTYEMIDDPLTNDVISWGENGNTFVVVKQVEFSRDLLPKYFKHNNFSSFVRQLNTYGFRKAAADKWEFAQENFKRGETELLPTIKRRKTQSPAAVRSVGVGGNSPSHSGAAEDMGSTSTGSVDRSDLSIENKRLKMDNEKLTSELALVKKKCEELLAYLQGDLNIGALAKKKCEELLAYLQGGLNIGADEINRILGKGTNGSSHDTDDDDDDNVVRRECGKGIRLFGVWLKEEEGKDKVEIDTAKGSCHKRGREDPIDGANNEFKAVV*