Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1204290 | XP_013458343.1 | 97.040 | 642 | 19 | 0 | 1 | 642 | 1 | 642 | 0.0 | 1296 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1204290 | sp|Q9ASW1|B3GTG_ARATH | 53.560 | 646 | 251 | 8 | 1 | 642 | 19 | 619 | 0.0 | 681 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1204290 | Msa1204310 | 0.914548 | 1.683885e-84 | -8.615850e-47 |
| Msa1204290 | Msa1439290 | 0.893285 | 7.247339e-75 | -8.615850e-47 |
| Msa1204290 | Msa1451470 | 0.892057 | 2.253808e-74 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1204290 | MtrunA17_Chr4g0068981 | 97.040 | 642 | 19 | 0 | 1 | 642 | 1 | 642 | 0.0 | 1296 |
| Msa1204290 | MtrunA17_Chr5g0417441 | 49.614 | 647 | 307 | 8 | 1 | 641 | 1 | 634 | 0.0 | 616 |
| Msa1204290 | MtrunA17_Chr2g0285521 | 36.106 | 565 | 318 | 12 | 110 | 641 | 132 | 686 | 1.22e-109 | 345 |
| Msa1204290 | MtrunA17_Chr4g0059801 | 37.291 | 539 | 305 | 15 | 120 | 641 | 90 | 612 | 8.67e-109 | 341 |
| Msa1204290 | MtrunA17_Chr5g0415331 | 35.727 | 557 | 320 | 14 | 116 | 641 | 91 | 640 | 2.32e-104 | 330 |
| Msa1204290 | MtrunA17_Chr8g0363761 | 34.173 | 556 | 324 | 15 | 116 | 641 | 106 | 649 | 9.46e-100 | 318 |
| Msa1204290 | MtrunA17_Chr8g0360581 | 25.287 | 261 | 176 | 7 | 391 | 641 | 80 | 331 | 5.23e-12 | 67.8 |
| Msa1204290 | MtrunA17_Chr2g0316241 | 25.000 | 260 | 178 | 7 | 391 | 641 | 74 | 325 | 5.05e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1204290 | AT3G06440.1 | 53.560 | 646 | 251 | 8 | 1 | 642 | 19 | 619 | 0.0 | 681 |
| Msa1204290 | AT3G06440.2 | 50.853 | 645 | 241 | 9 | 1 | 642 | 19 | 590 | 0.0 | 629 |
| Msa1204290 | AT1G26810.2 | 46.851 | 651 | 325 | 7 | 1 | 641 | 1 | 640 | 0.0 | 578 |
| Msa1204290 | AT1G26810.1 | 46.851 | 651 | 325 | 7 | 1 | 641 | 1 | 640 | 0.0 | 578 |
| Msa1204290 | AT5G62620.1 | 38.178 | 516 | 281 | 10 | 157 | 641 | 170 | 678 | 3.17e-111 | 349 |
| Msa1204290 | AT1G74800.1 | 36.842 | 551 | 317 | 13 | 113 | 641 | 128 | 669 | 2.58e-109 | 344 |
| Msa1204290 | AT1G27120.2 | 36.553 | 528 | 298 | 11 | 139 | 641 | 124 | 639 | 8.18e-106 | 334 |
| Msa1204290 | AT1G27120.1 | 36.553 | 528 | 298 | 11 | 139 | 641 | 155 | 670 | 1.48e-105 | 334 |
| Msa1204290 | AT4G21060.2 | 34.743 | 544 | 317 | 13 | 128 | 641 | 146 | 681 | 6.74e-100 | 320 |
| Msa1204290 | AT4G21060.1 | 34.743 | 544 | 317 | 13 | 128 | 641 | 203 | 738 | 2.46e-99 | 320 |
| Msa1204290 | AT5G62620.2 | 36.080 | 449 | 249 | 10 | 157 | 574 | 170 | 611 | 4.13e-81 | 268 |
| Msa1204290 | AT2G26100.1 | 25.581 | 258 | 179 | 4 | 391 | 641 | 107 | 358 | 2.14e-16 | 82.0 |
| Msa1204290 | AT2G26100.2 | 26.106 | 226 | 155 | 3 | 391 | 610 | 107 | 326 | 2.01e-15 | 79.0 |
| Msa1204290 | AT1G53290.1 | 26.349 | 315 | 198 | 9 | 352 | 641 | 29 | 334 | 2.56e-15 | 78.2 |
| Msa1204290 | AT3G14960.1 | 26.852 | 216 | 151 | 3 | 389 | 598 | 79 | 293 | 5.67e-15 | 77.4 |
Find 140 sgRNAs with CRISPR-Local
Find 320 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACAATTGCAATTTGCATTT+TGG | 0.096764 | 8_1:-59832181 | Msa1204290:CDS |
| AATACATGGACTAGTGATTT+TGG | 0.137369 | 8_1:-59833569 | Msa1204290:CDS |
| TTTCTACTGTACAGTCTTAA+AGG | 0.188302 | 8_1:-59834235 | Msa1204290:CDS |
| GAAACGGTTATATTTATTTC+AGG | 0.207606 | 8_1:-59834320 | Msa1204290:five_prime_UTR |
| AATCAACAAAAGGCATTAAT+TGG | 0.212309 | 8_1:+59832226 | None:intergenic |
| TTTAACTCCTTGAGCTATTT+CGG | 0.214747 | 8_1:+59833931 | None:intergenic |
| TTTACTCAAACATTTGAATT+AGG | 0.219468 | 8_1:-59835142 | Msa1204290:five_prime_UTR |
| TGCAAGATAATTGGAGGATT+TGG | 0.247383 | 8_1:+59833647 | None:intergenic |
| AAAGGATTAGCCTCAGAAAA+AGG | 0.248836 | 8_1:+59833009 | None:intergenic |
| GCATATGGATTGAACAATTT+AGG | 0.250872 | 8_1:-59830892 | Msa1204290:CDS |
| TTAACTCCTTGAGCTATTTC+GGG | 0.251324 | 8_1:+59833932 | None:intergenic |
| TTTAAGTCTGTTATCAGTTC+TGG | 0.251836 | 8_1:-59832778 | Msa1204290:CDS |
| TTGAATCGGTGTTATGAATA+TGG | 0.269232 | 8_1:-59835285 | Msa1204290:five_prime_UTR |
| ATAGAGTTAATCTTGAATTA+TGG | 0.276791 | 8_1:-59832275 | Msa1204290:CDS |
| ATAGCAAAATTCGTTGTCTT+TGG | 0.279953 | 8_1:-59831650 | Msa1204290:CDS |
| GATATCTACTCACAACATTC+TGG | 0.289356 | 8_1:+59830731 | None:intergenic |
| CATTATAATGTGAGTCTTCC+TGG | 0.290225 | 8_1:-59833626 | Msa1204290:CDS |
| ACATTATAATGCAAGATAAT+TGG | 0.291182 | 8_1:+59833638 | None:intergenic |
| GGATTTCATATGACTGTAAA+TGG | 0.300607 | 8_1:-59832958 | Msa1204290:CDS |
| CTTCAGATGGCTTCCCTTTG+AGG | 0.308752 | 8_1:+59831923 | None:intergenic |
| TACCTAAAGCCATGATAAAA+AGG | 0.316882 | 8_1:+59834266 | None:intergenic |
| TAGGGATAGCTGGAGCCTTC+AGG | 0.328328 | 8_1:+59832703 | None:intergenic |
| CAATGAATGTTGTACTTGTT+TGG | 0.333423 | 8_1:-59833994 | Msa1204290:CDS |
| TGTCATTGTCTTGCCAAGTT+TGG | 0.340771 | 8_1:+59833799 | None:intergenic |
| TCGGCGCTCAAAGTTATTTC+CGG | 0.341737 | 8_1:+59832644 | None:intergenic |
| CTCCAGCTATCCCTAGAAAA+AGG | 0.342285 | 8_1:-59832695 | Msa1204290:CDS |
| CTTCTAAGTCATCTCCTGAT+AGG | 0.344437 | 8_1:-59831879 | Msa1204290:CDS |
| TAATAACTCTGTTGATTATG+AGG | 0.354468 | 8_1:-59830689 | Msa1204290:three_prime_UTR |
| GAAGGATGGTGTTATGCCTT+TGG | 0.357629 | 8_1:-59830778 | Msa1204290:CDS |
| TCACTGCCACATTGTGGGTT+GGG | 0.361190 | 8_1:-59832987 | Msa1204290:CDS |
| ATATCATTATCTTCCGTAAC+AGG | 0.362656 | 8_1:+59832744 | None:intergenic |
| TTGCTGTCCTTATCCCTATC+AGG | 0.368376 | 8_1:+59831865 | None:intergenic |
| ACTGGATCTCCCTTGTGGTT+TGG | 0.371403 | 8_1:-59833762 | Msa1204290:CDS |
| TTTCGATGCAGATCAGAAAA+TGG | 0.377851 | 8_1:-59834101 | Msa1204290:CDS |
| CCAAGTTTGGTCACAGAGAA+TGG | 0.379786 | 8_1:+59833812 | None:intergenic |
| CCATTCTCTGTGACCAAACT+TGG | 0.381533 | 8_1:-59833812 | Msa1204290:CDS |
| TCCTTTCACTGCCACATTGT+GGG | 0.385409 | 8_1:-59832992 | Msa1204290:CDS |
| GGCTAAAGGTTTACCTGTTA+CGG | 0.394794 | 8_1:-59832757 | Msa1204290:CDS |
| TTCACTGCCACATTGTGGGT+TGG | 0.395199 | 8_1:-59832988 | Msa1204290:CDS |
| CTGTTATCAGTTCTGGCTAA+AGG | 0.403419 | 8_1:-59832771 | Msa1204290:CDS |
| TGTACAGTCTTAAAGGAATT+CGG | 0.408260 | 8_1:-59834228 | Msa1204290:CDS |
| CTTTCTGAGGAAATATTAGA+AGG | 0.408472 | 8_1:+59833054 | None:intergenic |
| AAGGATGGTGTTATGCCTTT+GGG | 0.409372 | 8_1:-59830777 | Msa1204290:CDS |
| CCAGCTCCAGCTCCAGCTCC+AGG | 0.411454 | 8_1:+59835236 | None:intergenic |
| TCTTTACTAATTTGTTGAAT+CGG | 0.415814 | 8_1:-59835299 | Msa1204290:five_prime_UTR |
| ACACTGATCGGCATCCCTAA+TGG | 0.427912 | 8_1:-59833722 | Msa1204290:CDS |
| TTCACACCTGGAGCTGGAGC+TGG | 0.428081 | 8_1:-59835242 | Msa1204290:five_prime_UTR |
| AAGATGTTGCCATGGGCATA+TGG | 0.431266 | 8_1:-59830907 | Msa1204290:CDS |
| TAGAATCATTTGGTGGTGAA+TGG | 0.435315 | 8_1:+59834158 | None:intergenic |
| CCACCATGGGCACATGGTCC+TGG | 0.440633 | 8_1:-59831692 | Msa1204290:CDS |
| AGATGGCTTCCCTTTGAGGC+TGG | 0.441178 | 8_1:+59831927 | None:intergenic |
| TTAAAGAGGCTTCTGTAGCT+TGG | 0.451470 | 8_1:-59833913 | Msa1204290:CDS |
| GAATGGCTCTGAGGAGGTCC+TGG | 0.454334 | 8_1:-59832623 | Msa1204290:CDS |
| TGGACGGAAGCTCAAGCATA+TGG | 0.456280 | 8_1:-59832255 | Msa1204290:CDS |
| TTGAAAATGAAGAAGTGGTA+TGG | 0.458715 | 8_1:-59834292 | Msa1204290:exon |
| CAGATGATGATGCTTTCATA+AGG | 0.464275 | 8_1:-59831966 | Msa1204290:CDS |
| GTCATCTCCTGATAGGGATA+AGG | 0.468655 | 8_1:-59831872 | Msa1204290:CDS |
| CTTTCTGCAGTTTCTCCCAA+AGG | 0.470786 | 8_1:+59830762 | None:intergenic |
| CAATATGAGGCTGTACGTTC+TGG | 0.471244 | 8_1:-59832597 | Msa1204290:CDS |
| AAACGGTTATATTTATTTCA+GGG | 0.474514 | 8_1:-59834319 | Msa1204290:five_prime_UTR |
| CCTGGAGCTGGAGCTGGAGC+TGG | 0.475482 | 8_1:-59835236 | Msa1204290:five_prime_UTR |
| ATCCTTTCACTGCCACATTG+TGG | 0.477470 | 8_1:-59832993 | Msa1204290:CDS |
| GTCTATCTTACTAATCTTCG+AGG | 0.478025 | 8_1:+59833856 | None:intergenic |
| ATTCGTTGTCTTTGGCCACC+AGG | 0.479400 | 8_1:-59831642 | Msa1204290:CDS |
| TTATGAATATGGTGGTGAAT+AGG | 0.483953 | 8_1:-59835274 | Msa1204290:five_prime_UTR |
| GTCAGCACGATTAAAGTAGC+AGG | 0.484951 | 8_1:-59832804 | Msa1204290:CDS |
| AGCTTTCAGATTGAGCTAGC+TGG | 0.485254 | 8_1:-59833689 | Msa1204290:CDS |
| ATTGAACAATTTAGGAATGG+TGG | 0.485712 | 8_1:-59830884 | Msa1204290:CDS |
| AAACTATAATAATCAACAAA+AGG | 0.494113 | 8_1:+59832216 | None:intergenic |
| TTTCTGATCTGCATCGAAAG+AGG | 0.495941 | 8_1:+59834105 | None:intergenic |
| GAGTGTTTCACACCTGGAGC+TGG | 0.501124 | 8_1:-59835248 | Msa1204290:five_prime_UTR |
| TTCTAAGTCATCTCCTGATA+GGG | 0.503233 | 8_1:-59831878 | Msa1204290:CDS |
| TTGATCGGAGTATTCTCTAC+CGG | 0.508883 | 8_1:-59832663 | Msa1204290:CDS |
| AGGACCTCCTCAGAGCCATT+CGG | 0.510477 | 8_1:+59832625 | None:intergenic |
| CTCTTTCAAATTCACATATG+CGG | 0.510976 | 8_1:-59835179 | Msa1204290:five_prime_UTR |
| TCATGCTAAATATACCTTTG+CGG | 0.511523 | 8_1:+59833501 | None:intergenic |
| CGTATATTGTTCAAAATACA+TGG | 0.517784 | 8_1:-59833583 | Msa1204290:CDS |
| ACATTGTGGGTTGGGTCAGA+AGG | 0.519182 | 8_1:-59832979 | Msa1204290:CDS |
| TCGCGAGATATGACATATCC+AGG | 0.523922 | 8_1:+59831674 | None:intergenic |
| GAAGTGCTTTCCAGCCTCAA+AGG | 0.527978 | 8_1:-59831937 | Msa1204290:CDS |
| ATGTTAGCAGAACCATGAGC+AGG | 0.528160 | 8_1:+59833524 | None:intergenic |
| ACCCACAATGTGGCAGTGAA+AGG | 0.532066 | 8_1:+59832991 | None:intergenic |
| GATTCTTCTATTACACTGAT+CGG | 0.533821 | 8_1:-59833734 | Msa1204290:CDS |
| TAAATTAGAAGATGTTGCCA+TGG | 0.541216 | 8_1:-59830915 | Msa1204290:CDS |
| GTTTATTCAGCACAACATCA+AGG | 0.542401 | 8_1:-59835120 | Msa1204290:intron |
| TGGCACCAAAACCAACAAAA+CGG | 0.544787 | 8_1:-59834081 | Msa1204290:CDS |
| AAATAACTTTGAGCGCCGAA+TGG | 0.546477 | 8_1:-59832640 | Msa1204290:CDS |
| AAGTGCTTTCCAGCCTCAAA+GGG | 0.551248 | 8_1:-59831936 | Msa1204290:CDS |
| AACGAAGAGAATGTAAATGC+TGG | 0.551667 | 8_1:-59833096 | Msa1204290:CDS |
| AGTTCTATGTGCACTTTCTG+AGG | 0.553560 | 8_1:+59833041 | None:intergenic |
| AAATTAGAAGATGTTGCCAT+GGG | 0.554916 | 8_1:-59830914 | Msa1204290:CDS |
| CCACATTTGATACATGTCAC+AGG | 0.555339 | 8_1:-59834058 | Msa1204290:CDS |
| CCATCTGAAGGCCTCTTGTA+CGG | 0.556208 | 8_1:-59831910 | Msa1204290:CDS |
| TCTTTAATAGAATCATTTGG+TGG | 0.557042 | 8_1:+59834151 | None:intergenic |
| TGGATTGAACAATTTAGGAA+TGG | 0.558371 | 8_1:-59830887 | Msa1204290:CDS |
| TTATAATGCAAGATAATTGG+AGG | 0.560890 | 8_1:+59833641 | None:intergenic |
| GTTTATTGAAAATGAAGAAG+TGG | 0.561747 | 8_1:-59834297 | Msa1204290:exon |
| GAGGAAAGATGCCCTGCTCA+TGG | 0.566659 | 8_1:-59833536 | Msa1204290:CDS |
| CTCAAAGGGAAGCCATCTGA+AGG | 0.569898 | 8_1:-59831922 | Msa1204290:CDS |
| CACATGATACGTACCCACCA+TGG | 0.571594 | 8_1:-59831706 | Msa1204290:CDS |
| TTCATATGACTGTAAATGGA+AGG | 0.574417 | 8_1:-59832954 | Msa1204290:CDS |
| ATTTACGTTTGTTGCTGTCG+AGG | 0.575180 | 8_1:-59833967 | Msa1204290:CDS |
| AATAGCTCAAGGAGTTAAAG+AGG | 0.578574 | 8_1:-59833927 | Msa1204290:CDS |
| AGGTATGAGTGTTTCACACC+TGG | 0.578684 | 8_1:-59835254 | Msa1204290:five_prime_UTR |
| CGATGCAGAATCTTGAACCA+TGG | 0.589458 | 8_1:-59832830 | Msa1204290:intron |
| ACATGATACGTACCCACCAT+GGG | 0.589834 | 8_1:-59831705 | Msa1204290:CDS |
| CAGGACCATGTGCCCATGGT+GGG | 0.590057 | 8_1:+59831693 | None:intergenic |
| TATCCAGGACCATGTGCCCA+TGG | 0.590642 | 8_1:+59831689 | None:intergenic |
| TACAGCCTCATATTGCATCC+AGG | 0.592681 | 8_1:+59832605 | None:intergenic |
| TTCATTATGAGAATGATGAG+AGG | 0.592883 | 8_1:-59830853 | Msa1204290:CDS |
| ATCACACTGGATCTCCCTTG+TGG | 0.593261 | 8_1:-59833767 | Msa1204290:CDS |
| ACGTACCCACCATGGGCACA+TGG | 0.599828 | 8_1:-59831698 | Msa1204290:CDS |
| GAGCAGTACTTCAGAAACAA+AGG | 0.602118 | 8_1:+59835206 | None:intergenic |
| TTGCGCATTATCAAAATCGA+AGG | 0.606452 | 8_1:-59830796 | Msa1204290:CDS |
| CACATTTGATACATGTCACA+GGG | 0.607371 | 8_1:-59834057 | Msa1204290:CDS |
| TTAATCGTGCTGACTAACCA+TGG | 0.610947 | 8_1:+59832813 | None:intergenic |
| AAGATATTAGACCGTACAAG+AGG | 0.616932 | 8_1:+59831899 | None:intergenic |
| AAAATGAAGAAGTGGTATGG+AGG | 0.619161 | 8_1:-59834289 | Msa1204290:CDS |
| AGTTAATCTTGAATTATGGA+CGG | 0.620195 | 8_1:-59832271 | Msa1204290:CDS |
| AGCTGGACAAGAGCTAGAAG+AGG | 0.621403 | 8_1:-59833672 | Msa1204290:CDS |
| CCAGGACCATGTGCCCATGG+TGG | 0.623499 | 8_1:+59831692 | None:intergenic |
| CCGTACAAGAGGCCTTCAGA+TGG | 0.626770 | 8_1:+59831910 | None:intergenic |
| GAATCTACGACCAAACCACA+AGG | 0.628470 | 8_1:+59833752 | None:intergenic |
| TTGTTCAATCCATATGCCCA+TGG | 0.632568 | 8_1:+59830898 | None:intergenic |
| AGCGCCGAATGGCTCTGAGG+AGG | 0.634744 | 8_1:-59832629 | Msa1204290:CDS |
| GCATTATCAAAATCGAAGGA+TGG | 0.638592 | 8_1:-59830792 | Msa1204290:CDS |
| TCGAAGATTAGTAAGATAGA+CGG | 0.641292 | 8_1:-59833854 | Msa1204290:CDS |
| GACAGATAGTGAAATCACAC+TGG | 0.646133 | 8_1:-59833780 | Msa1204290:CDS |
| GGTTCTGCTAACATCCGCAA+AGG | 0.648279 | 8_1:-59833515 | Msa1204290:intron |
| TGTTAGCAGAACCATGAGCA+GGG | 0.651531 | 8_1:+59833525 | None:intergenic |
| GAGGTCCTGGATGCAATATG+AGG | 0.652896 | 8_1:-59832610 | Msa1204290:CDS |
| TTGAGCGCCGAATGGCTCTG+AGG | 0.661301 | 8_1:-59832632 | Msa1204290:CDS |
| GCTTTGCCCGAAATAGCTCA+AGG | 0.661971 | 8_1:-59833938 | Msa1204290:CDS |
| ATAGGGATAAGGACAGCAAG+TGG | 0.679605 | 8_1:-59831861 | Msa1204290:CDS |
| AATCGGTGTTATGAATATGG+TGG | 0.690923 | 8_1:-59835282 | Msa1204290:five_prime_UTR |
| TTCTGACCCAACCCACAATG+TGG | 0.693365 | 8_1:+59832981 | None:intergenic |
| TGTTGATGTTGAGAACCTGA+AGG | 0.697040 | 8_1:-59832718 | Msa1204290:CDS |
| CCTGTGACATGTATCAAATG+TGG | 0.710894 | 8_1:+59834058 | None:intergenic |
| CAAGTGGTACATCAGTGACG+AGG | 0.722140 | 8_1:-59831845 | Msa1204290:intron |
| AATCTACGACCAAACCACAA+GGG | 0.735183 | 8_1:+59833753 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATAATTTAAGAAAATAGA+AGG | - | chr8_1:59831440-59831459 | Msa1204290:intron | 10.0% |
| !! | AATAATTTAAGAAAATAGAA+GGG | - | chr8_1:59831441-59831460 | Msa1204290:intron | 10.0% |
| !! | TAAAAATTAAATAATTGGAA+TGG | - | chr8_1:59833035-59833054 | Msa1204290:CDS | 10.0% |
| !!! | TTATTTTCTATCTATTTTTC+TGG | - | chr8_1:59830960-59830979 | Msa1204290:intron | 15.0% |
| !!! | CATATTACATTTTCAATATT+TGG | - | chr8_1:59831010-59831029 | Msa1204290:intron | 15.0% |
| !!! | TTTTCTTTAATAGAATCATT+TGG | + | chr8_1:59831768-59831787 | None:intergenic | 15.0% |
| !! | ACTGCTAAAAATTAAATAAT+TGG | - | chr8_1:59833030-59833049 | Msa1204290:CDS | 15.0% |
| !!! | ATTTTTTTAGCACAATAAAA+CGG | - | chr8_1:59833435-59833454 | Msa1204290:intron | 15.0% |
| !! | AAACTATAATAATCAACAAA+AGG | + | chr8_1:59833700-59833719 | None:intergenic | 15.0% |
| !!! | TCATTATCTTATGTTATTTT+AGG | - | chr8_1:59834178-59834197 | Msa1204290:CDS | 15.0% |
| !! | TTAATGTCATCTTAAAATTT+GGG | + | chr8_1:59834556-59834575 | None:intergenic | 15.0% |
| !! | TTTAATGTCATCTTAAAATT+TGG | + | chr8_1:59834557-59834576 | None:intergenic | 15.0% |
| !!! | TCTTTACTAATTTGTTGAAT+CGG | - | chr8_1:59830614-59830633 | Msa1204290:three_prime_UTR | 20.0% |
| !! | TTTACTCAAACATTTGAATT+AGG | - | chr8_1:59830771-59830790 | Msa1204290:CDS | 20.0% |
| !! | TTATTGAATCTTAATTGACA+TGG | + | chr8_1:59830915-59830934 | None:intergenic | 20.0% |
| !!! | ATTACATTTTCAATATTTGG+AGG | - | chr8_1:59831013-59831032 | Msa1204290:intron | 20.0% |
| !!! | ATAATGCCTTATTATGATAT+AGG | - | chr8_1:59831189-59831208 | Msa1204290:intron | 20.0% |
| !! | AATGAATAAAAAAGTCATCT+AGG | + | chr8_1:59831540-59831559 | None:intergenic | 20.0% |
| !! | AAACGGTTATATTTATTTCA+GGG | - | chr8_1:59831594-59831613 | Msa1204290:intron | 20.0% |
| !! | ACATTATAATGCAAGATAAT+TGG | + | chr8_1:59832278-59832297 | None:intergenic | 20.0% |
| !!! | CATGTATTTTGAACAATATA+CGG | + | chr8_1:59832332-59832351 | None:intergenic | 20.0% |
| !!! | AAAAATCACATATTTCTAGT+TGG | + | chr8_1:59832542-59832561 | None:intergenic | 20.0% |
| !! | TCGACAAAAATATAAAATGT+TGG | + | chr8_1:59833066-59833085 | None:intergenic | 20.0% |
| !! | ATAGAGTTAATCTTGAATTA+TGG | - | chr8_1:59833638-59833657 | Msa1204290:CDS | 20.0% |
| !!! | TTTTCATGATGTATTTAGAA+GGG | + | chr8_1:59833927-59833946 | None:intergenic | 20.0% |
| !! | GAAAAATAAAAATTTATGGG+AGG | + | chr8_1:59834152-59834171 | None:intergenic | 20.0% |
| !!! | ATCTTATGTTATTTTAGGAA+TGG | - | chr8_1:59834183-59834202 | Msa1204290:CDS | 20.0% |
| !! | TTATAACAAAACTTCATGAT+GGG | + | chr8_1:59834331-59834350 | None:intergenic | 20.0% |
| !! | ATTATAACAAAACTTCATGA+TGG | + | chr8_1:59834332-59834351 | None:intergenic | 20.0% |
| !!! | GAAGTTTTGTTATAATCTTT+CGG | - | chr8_1:59834336-59834355 | Msa1204290:intron | 20.0% |
| !! | TATTTCAAGGATATATCTTA+AGG | - | chr8_1:59834360-59834379 | Msa1204290:intron | 20.0% |
| !! | ATTTCAAGGATATATCTTAA+GGG | - | chr8_1:59834361-59834380 | Msa1204290:intron | 20.0% |
| !! | TCTGAAAATGAACTTATAAA+TGG | - | chr8_1:59834694-59834713 | Msa1204290:intron | 20.0% |
| !! | CTGAAAATGAACTTATAAAT+GGG | - | chr8_1:59834695-59834714 | Msa1204290:intron | 20.0% |
| !! | TGAAAATGAACTTATAAATG+GGG | - | chr8_1:59834696-59834715 | Msa1204290:intron | 20.0% |
| !! | ATTTGATTCCTCTTAAAATT+TGG | + | chr8_1:59834767-59834786 | None:intergenic | 20.0% |
| !!! | TTAATATCACAAATTTTCCT+GGG | - | chr8_1:59834792-59834811 | Msa1204290:intron | 20.0% |
| !! | TAAAAGAATTGGAACTTAAA+TGG | - | chr8_1:59834827-59834846 | Msa1204290:intron | 20.0% |
| !! | AAATAAAATTCAGCAGTTAA+TGG | + | chr8_1:59834957-59834976 | None:intergenic | 20.0% |
| !! | ATTCAAACTTTCTTGTTTCT+TGG | - | chr8_1:59830884-59830903 | Msa1204290:CDS | 25.0% |
| !! | ATTTTCAATATTTGGAGGTT+GGG | - | chr8_1:59831018-59831037 | Msa1204290:intron | 25.0% |
| !! | AAAAGTATGTGAAGTAGAAT+AGG | - | chr8_1:59831157-59831176 | Msa1204290:intron | 25.0% |
| ! | TTGCAAAATGCAACAAATAA+TGG | + | chr8_1:59831260-59831279 | None:intergenic | 25.0% |
| !!! | ATTTGTTGCATTTTGCAAAA+AGG | - | chr8_1:59831262-59831281 | Msa1204290:intron | 25.0% |
| !! | TTGCAAAAAGGCATAAAATT+AGG | - | chr8_1:59831274-59831293 | Msa1204290:intron | 25.0% |
| !! | TGCAAAAAGGCATAAAATTA+GGG | - | chr8_1:59831275-59831294 | Msa1204290:intron | 25.0% |
| ! | ATTTAACATGATCTAATGTG+TGG | + | chr8_1:59831322-59831341 | None:intergenic | 25.0% |
| ! | GAAACGGTTATATTTATTTC+AGG | - | chr8_1:59831593-59831612 | Msa1204290:intron | 25.0% |
| ! | GTTTATTGAAAATGAAGAAG+TGG | - | chr8_1:59831616-59831635 | Msa1204290:intron | 25.0% |
| ! | TCTTTAATAGAATCATTTGG+TGG | + | chr8_1:59831765-59831784 | None:intergenic | 25.0% |
| ! | TTATAATGCAAGATAATTGG+AGG | + | chr8_1:59832275-59832294 | None:intergenic | 25.0% |
| ! | CGTATATTGTTCAAAATACA+TGG | - | chr8_1:59832330-59832349 | Msa1204290:intron | 25.0% |
| !!! | ATGCAATTATAATGGACAAA+AGG | - | chr8_1:59832511-59832530 | Msa1204290:intron | 25.0% |
| !! | AATATGTGATTTTTATGTCG+AGG | - | chr8_1:59832548-59832567 | Msa1204290:intron | 25.0% |
| !! | ATGAAACATCTTTTGCATAT+AGG | - | chr8_1:59832983-59833002 | Msa1204290:CDS | 25.0% |
| !! | TGAAACATCTTTTGCATATA+GGG | - | chr8_1:59832984-59833003 | Msa1204290:CDS | 25.0% |
| ! | TTGCTATAATATTGAATGCA+TGG | + | chr8_1:59833536-59833555 | None:intergenic | 25.0% |
| ! | ACAAGAGAGGAATAATTTAA+AGG | + | chr8_1:59833568-59833587 | None:intergenic | 25.0% |
| ! | AGTTAATCTTGAATTATGGA+CGG | - | chr8_1:59833642-59833661 | Msa1204290:CDS | 25.0% |
| !!! | AATCAACAAAAGGCATTAAT+TGG | + | chr8_1:59833690-59833709 | None:intergenic | 25.0% |
| !! | ACAATTGCAATTTGCATTTT+GGG | - | chr8_1:59833733-59833752 | Msa1204290:CDS | 25.0% |
| !! | GTTTATTTGTTAGTTAATGC+TGG | - | chr8_1:59833804-59833823 | Msa1204290:CDS | 25.0% |
| !!! | AAGCAGTGATTTTTATTTAG+TGG | - | chr8_1:59833832-59833851 | Msa1204290:CDS | 25.0% |
| !! | GTTTTCATGATGTATTTAGA+AGG | + | chr8_1:59833928-59833947 | None:intergenic | 25.0% |
| ! | ATAATCTTTCGGATATTTCA+AGG | - | chr8_1:59834347-59834366 | Msa1204290:intron | 25.0% |
| ! | ATTAAGAGTCTCAAATTGAT+TGG | - | chr8_1:59834662-59834681 | Msa1204290:intron | 25.0% |
| ! | GAAAATGAACTTATAAATGG+GGG | - | chr8_1:59834697-59834716 | Msa1204290:intron | 25.0% |
| ! | ATTCCTCTTAAAATTTGGAT+CGG | + | chr8_1:59834762-59834781 | None:intergenic | 25.0% |
| !! | CTTAATATCACAAATTTTCC+TGG | - | chr8_1:59834791-59834810 | Msa1204290:intron | 25.0% |
| ! | ACCACTTATGTTAAAAGAAT+TGG | - | chr8_1:59834816-59834835 | Msa1204290:intron | 25.0% |
| !! | TCCAATTCTTTTAACATAAG+TGG | + | chr8_1:59834820-59834839 | None:intergenic | 25.0% |
| ! | CTTAAATATGTATTCGCAAA+AGG | - | chr8_1:59834868-59834887 | Msa1204290:intron | 25.0% |
| ! | ATAGAAGAAAAATGCAATGA+TGG | + | chr8_1:59834902-59834921 | None:intergenic | 25.0% |
| !! | TAATAACTCTGTTGATTATG+AGG | - | chr8_1:59835224-59835243 | Msa1204290:five_prime_UTR | 25.0% |
| !! | TTGAATCGGTGTTATGAATA+TGG | - | chr8_1:59830628-59830647 | Msa1204290:three_prime_UTR | 30.0% |
| ! | TTATGAATATGGTGGTGAAT+AGG | - | chr8_1:59830639-59830658 | Msa1204290:three_prime_UTR | 30.0% |
| CTCTTTCAAATTCACATATG+CGG | - | chr8_1:59830734-59830753 | Msa1204290:exon | 30.0% | |
| ! | CATTTTCAATATTTGGAGGT+TGG | - | chr8_1:59831017-59831036 | Msa1204290:intron | 30.0% |
| ATCCTAGATTCAATCAAACT+CGG | - | chr8_1:59831080-59831099 | Msa1204290:intron | 30.0% | |
| AGGTTTGAATATCCTAGAAA+TGG | - | chr8_1:59831225-59831244 | Msa1204290:intron | 30.0% | |
| CAAAATGCAACAAATAATGG+AGG | + | chr8_1:59831257-59831276 | None:intergenic | 30.0% | |
| AAATTCTTTGTCTGCAGAAA+CGG | - | chr8_1:59831577-59831596 | Msa1204290:intron | 30.0% | |
| TTGAAAATGAAGAAGTGGTA+TGG | - | chr8_1:59831621-59831640 | Msa1204290:intron | 30.0% | |
| TACCTAAAGCCATGATAAAA+AGG | + | chr8_1:59831650-59831669 | None:intergenic | 30.0% | |
| TTTCTACTGTACAGTCTTAA+AGG | - | chr8_1:59831678-59831697 | Msa1204290:CDS | 30.0% | |
| TGTACAGTCTTAAAGGAATT+CGG | - | chr8_1:59831685-59831704 | Msa1204290:CDS | 30.0% | |
| CAATGAATGTTGTACTTGTT+TGG | - | chr8_1:59831919-59831938 | Msa1204290:CDS | 30.0% | |
| TTTAACTCCTTGAGCTATTT+CGG | + | chr8_1:59831985-59832004 | None:intergenic | 30.0% | |
| TCGAAGATTAGTAAGATAGA+CGG | - | chr8_1:59832059-59832078 | Msa1204290:intron | 30.0% | |
| !!! | ATGGACAGTTTTGATTTTCT+GGG | + | chr8_1:59832085-59832104 | None:intergenic | 30.0% |
| !!! | AATGGACAGTTTTGATTTTC+TGG | + | chr8_1:59832086-59832105 | None:intergenic | 30.0% |
| GATTCTTCTATTACACTGAT+CGG | - | chr8_1:59832179-59832198 | Msa1204290:CDS | 30.0% | |
| !!! | AATACATGGACTAGTGATTT+TGG | - | chr8_1:59832344-59832363 | Msa1204290:intron | 30.0% |
| !!! | ATACATGGACTAGTGATTTT+GGG | - | chr8_1:59832345-59832364 | Msa1204290:intron | 30.0% |
| TCATGCTAAATATACCTTTG+CGG | + | chr8_1:59832415-59832434 | None:intergenic | 30.0% | |
| TCGTTTGCATGCAATTATAA+TGG | - | chr8_1:59832503-59832522 | Msa1204290:intron | 30.0% | |
| TTTATAATTCGAACCTAGCT+TGG | - | chr8_1:59832586-59832605 | Msa1204290:CDS | 30.0% | |
| AAACTGCACTCAAGAATAAA+AGG | + | chr8_1:59832698-59832717 | None:intergenic | 30.0% | |
| !!! | TTGAGTGCAGTTTTTTATGA+GGG | - | chr8_1:59832705-59832724 | Msa1204290:CDS | 30.0% |
| ! | CTTTCTGAGGAAATATTAGA+AGG | + | chr8_1:59832862-59832881 | None:intergenic | 30.0% |
| GGATTTCATATGACTGTAAA+TGG | - | chr8_1:59832955-59832974 | Msa1204290:CDS | 30.0% | |
| TTCATATGACTGTAAATGGA+AGG | - | chr8_1:59832959-59832978 | Msa1204290:CDS | 30.0% | |
| TTTAAGTCTGTTATCAGTTC+TGG | - | chr8_1:59833135-59833154 | Msa1204290:CDS | 30.0% | |
| ATATCATTATCTTCCGTAAC+AGG | + | chr8_1:59833172-59833191 | None:intergenic | 30.0% | |
| ! | ACAAAACAAGCCTTTTTCTA+GGG | + | chr8_1:59833231-59833250 | None:intergenic | 30.0% |
| ! | AACAAAACAAGCCTTTTTCT+AGG | + | chr8_1:59833232-59833251 | None:intergenic | 30.0% |
| !!! | AAAAGGCTTGTTTTGTTGAT+CGG | - | chr8_1:59833235-59833254 | Msa1204290:intron | 30.0% |
| ! | AGAACAGTTTTTAACAAGAG+AGG | + | chr8_1:59833581-59833600 | None:intergenic | 30.0% |
| ! | GACAATTGCAATTTGCATTT+TGG | - | chr8_1:59833732-59833751 | Msa1204290:CDS | 30.0% |
| ! | CAATTGCAATTTGCATTTTG+GGG | - | chr8_1:59833734-59833753 | Msa1204290:CDS | 30.0% |
| ! | AATTGCAATTTGCATTTTGG+GGG | - | chr8_1:59833735-59833754 | Msa1204290:CDS | 30.0% |
| ATAGCAAAATTCGTTGTCTT+TGG | - | chr8_1:59834263-59834282 | Msa1204290:CDS | 30.0% | |
| !! | TTACTTTGAGTTTTCTTTCC+TGG | + | chr8_1:59834292-59834311 | None:intergenic | 30.0% |
| CAACAATCAAGTAAAGTATG+CGG | + | chr8_1:59834417-59834436 | None:intergenic | 30.0% | |
| GCATACTTTACTTGATTGTT+GGG | - | chr8_1:59834416-59834435 | Msa1204290:intron | 30.0% | |
| CACAAAATGAGTTCATAAGT+GGG | - | chr8_1:59834480-59834499 | Msa1204290:intron | 30.0% | |
| ACAAAATGAGTTCATAAGTG+GGG | - | chr8_1:59834481-59834500 | Msa1204290:intron | 30.0% | |
| TAACTCAACCATTACAAATC+TGG | + | chr8_1:59834526-59834545 | None:intergenic | 30.0% | |
| AGATTTGTAATGGTTGAGTT+AGG | - | chr8_1:59834525-59834544 | Msa1204290:intron | 30.0% | |
| ! | GTCATCTTAAAATTTGGGTT+GGG | + | chr8_1:59834551-59834570 | None:intergenic | 30.0% |
| TGTCATCTTAAAATTTGGGT+TGG | + | chr8_1:59834552-59834571 | None:intergenic | 30.0% | |
| AAAACCTAACAAAAACCCAT+TGG | - | chr8_1:59834574-59834593 | Msa1204290:intron | 30.0% | |
| AAACCTAACAAAAACCCATT+GGG | - | chr8_1:59834575-59834594 | Msa1204290:intron | 30.0% | |
| TTCCTCTTAAAATTTGGATC+GGG | + | chr8_1:59834761-59834780 | None:intergenic | 30.0% | |
| ! | CTTCTATTCATCTTGCTATA+TGG | - | chr8_1:59834915-59834934 | Msa1204290:intron | 30.0% |
| AAAATTCAGCAGTTAATGGA+AGG | + | chr8_1:59834953-59834972 | None:intergenic | 30.0% | |
| TAAATTAGAAGATGTTGCCA+TGG | - | chr8_1:59834998-59835017 | Msa1204290:intron | 30.0% | |
| AAATTAGAAGATGTTGCCAT+GGG | - | chr8_1:59834999-59835018 | Msa1204290:intron | 30.0% | |
| ! | GCATATGGATTGAACAATTT+AGG | - | chr8_1:59835021-59835040 | Msa1204290:intron | 30.0% |
| TGGATTGAACAATTTAGGAA+TGG | - | chr8_1:59835026-59835045 | Msa1204290:intron | 30.0% | |
| ATTGAACAATTTAGGAATGG+TGG | - | chr8_1:59835029-59835048 | Msa1204290:intron | 30.0% | |
| TTCATTATGAGAATGATGAG+AGG | - | chr8_1:59835060-59835079 | Msa1204290:intron | 30.0% | |
| !! | AATCGGTGTTATGAATATGG+TGG | - | chr8_1:59830631-59830650 | Msa1204290:three_prime_UTR | 35.0% |
| GTTTATTCAGCACAACATCA+AGG | - | chr8_1:59830793-59830812 | Msa1204290:CDS | 35.0% | |
| !! | AGCTCAACTGATTTGAGTTA+AGG | - | chr8_1:59831042-59831061 | Msa1204290:intron | 35.0% |
| GGGACTCCTATATCATAATA+AGG | + | chr8_1:59831198-59831217 | None:intergenic | 35.0% | |
| AGGATATTCAAACCTCACAA+CGG | + | chr8_1:59831220-59831239 | None:intergenic | 35.0% | |
| ! | ATGCAACAAATAATGGAGGA+AGG | + | chr8_1:59831253-59831272 | None:intergenic | 35.0% |
| AGAACGAAAGCTAATTGACA+AGG | + | chr8_1:59831348-59831367 | None:intergenic | 35.0% | |
| GTAACAACATGTGTTAGTGT+TGG | - | chr8_1:59831471-59831490 | Msa1204290:intron | 35.0% | |
| AAAATGAAGAAGTGGTATGG+AGG | - | chr8_1:59831624-59831643 | Msa1204290:intron | 35.0% | |
| !! | TAGAATCATTTGGTGGTGAA+TGG | + | chr8_1:59831758-59831777 | None:intergenic | 35.0% |
| TTTCGATGCAGATCAGAAAA+TGG | - | chr8_1:59831812-59831831 | Msa1204290:intron | 35.0% | |
| CACATTTGATACATGTCACA+GGG | - | chr8_1:59831856-59831875 | Msa1204290:CDS | 35.0% | |
| ! | TTAACTCCTTGAGCTATTTC+GGG | + | chr8_1:59831984-59832003 | None:intergenic | 35.0% |
| AATAGCTCAAGGAGTTAAAG+AGG | - | chr8_1:59831986-59832005 | Msa1204290:CDS | 35.0% | |
| GTCTATCTTACTAATCTTCG+AGG | + | chr8_1:59832060-59832079 | None:intergenic | 35.0% | |
| ! | AGCTACTGTTTTGTCCATTA+GGG | + | chr8_1:59832208-59832227 | None:intergenic | 35.0% |
| ! | AAGCTACTGTTTTGTCCATT+AGG | + | chr8_1:59832209-59832228 | None:intergenic | 35.0% |
| TGCAAGATAATTGGAGGATT+TGG | + | chr8_1:59832269-59832288 | None:intergenic | 35.0% | |
| CATTATAATGTGAGTCTTCC+TGG | - | chr8_1:59832287-59832306 | Msa1204290:CDS | 35.0% | |
| AACATGACATAATCCAAGCT+AGG | + | chr8_1:59832602-59832621 | None:intergenic | 35.0% | |
| TACCATCTTCATTCCTTAGT+AGG | - | chr8_1:59832626-59832645 | Msa1204290:CDS | 35.0% | |
| !!! | CTTGAGTGCAGTTTTTTATG+AGG | - | chr8_1:59832704-59832723 | Msa1204290:CDS | 35.0% |
| ! | TTTATGAGGGAAGCTTTTAG+TGG | - | chr8_1:59832718-59832737 | Msa1204290:CDS | 35.0% |
| CATCAACTACATCATAGAGT+TGG | + | chr8_1:59832759-59832778 | None:intergenic | 35.0% | |
| AACGAAGAGAATGTAAATGC+TGG | - | chr8_1:59832817-59832836 | Msa1204290:CDS | 35.0% | |
| ! | TGCTAATTTCCCTTTTTCTG+AGG | - | chr8_1:59832894-59832913 | Msa1204290:intron | 35.0% |
| !! | AAGGATTAGCCTCAGAAAAA+GGG | + | chr8_1:59832906-59832925 | None:intergenic | 35.0% |
| !! | AAAGGATTAGCCTCAGAAAA+AGG | + | chr8_1:59832907-59832926 | None:intergenic | 35.0% |
| ! | AACATCTTTTGCATATAGGG+AGG | - | chr8_1:59832987-59833006 | Msa1204290:CDS | 35.0% |
| ! | CATATAGGGAGGTATGATAT+AGG | - | chr8_1:59832998-59833017 | Msa1204290:CDS | 35.0% |
| ! | GTTGCTGTCAGATTTTTCAT+TGG | - | chr8_1:59833343-59833362 | Msa1204290:intron | 35.0% |
| TAGCACAATAAAACGGCAAT+AGG | - | chr8_1:59833442-59833461 | Msa1204290:intron | 35.0% | |
| ! | CAGATGATGATGCTTTCATA+AGG | - | chr8_1:59833947-59833966 | Msa1204290:CDS | 35.0% |
| AAGATATTAGACCGTACAAG+AGG | + | chr8_1:59834017-59834036 | None:intergenic | 35.0% | |
| TTCTAAGTCATCTCCTGATA+GGG | - | chr8_1:59834035-59834054 | Msa1204290:CDS | 35.0% | |
| ! | ACAAAACTTCATGATGGGAA+AGG | + | chr8_1:59834326-59834345 | None:intergenic | 35.0% |
| !! | CTCGTATTAGAAGTGTCAAA+AGG | - | chr8_1:59834388-59834407 | Msa1204290:intron | 35.0% |
| CGCATACTTTACTTGATTGT+TGG | - | chr8_1:59834415-59834434 | Msa1204290:intron | 35.0% | |
| TTTACTTGATTGTTGGGACT+GGG | - | chr8_1:59834422-59834441 | Msa1204290:intron | 35.0% | |
| GGACTTATCTCATCAAATGT+GGG | + | chr8_1:59834461-59834480 | None:intergenic | 35.0% | |
| TGGACTTATCTCATCAAATG+TGG | + | chr8_1:59834462-59834481 | None:intergenic | 35.0% | |
| ! | CCACTTATGAACTCATTTTG+TGG | + | chr8_1:59834482-59834501 | None:intergenic | 35.0% |
| CCACAAAATGAGTTCATAAG+TGG | - | chr8_1:59834479-59834498 | Msa1204290:intron | 35.0% | |
| CAAAATGAGTTCATAAGTGG+GGG | - | chr8_1:59834482-59834501 | Msa1204290:intron | 35.0% | |
| ! | CATTACAAATCTGGCTTGTA+AGG | + | chr8_1:59834517-59834536 | None:intergenic | 35.0% |
| CTTACAAGCCAGATTTGTAA+TGG | - | chr8_1:59834515-59834534 | Msa1204290:intron | 35.0% | |
| CTCAAATTGATTGGATGAGA+AGG | - | chr8_1:59834671-59834690 | Msa1204290:intron | 35.0% | |
| TCAATCCTTACAAAACCGTA+AGG | + | chr8_1:59834732-59834751 | None:intergenic | 35.0% | |
| !! | GGTTTTGTAAGGATTGAGTT+AGG | - | chr8_1:59834735-59834754 | Msa1204290:intron | 35.0% |
| ! | TTTTAACATAAGTGGTTCCC+AGG | + | chr8_1:59834812-59834831 | None:intergenic | 35.0% |
| TTGCGCATTATCAAAATCGA+AGG | - | chr8_1:59835117-59835136 | Msa1204290:intron | 35.0% | |
| GCATTATCAAAATCGAAGGA+TGG | - | chr8_1:59835121-59835140 | Msa1204290:five_prime_UTR | 35.0% | |
| GATATCTACTCACAACATTC+TGG | + | chr8_1:59835185-59835204 | None:intergenic | 35.0% | |
| GAGCAGTACTTCAGAAACAA+AGG | + | chr8_1:59830710-59830729 | None:intergenic | 40.0% | |
| TGAGTTAAGGAATACGAAGC+TGG | - | chr8_1:59831055-59831074 | Msa1204290:intron | 40.0% | |
| GTCCGAGTTTGATTGAATCT+AGG | + | chr8_1:59831085-59831104 | None:intergenic | 40.0% | |
| GATATTCAAACCTCACAACG+GGG | + | chr8_1:59831218-59831237 | None:intergenic | 40.0% | |
| GGATATTCAAACCTCACAAC+GGG | + | chr8_1:59831219-59831238 | None:intergenic | 40.0% | |
| ! | CTTGAGATTGAAAGCGTGTT+CGG | + | chr8_1:59831500-59831519 | None:intergenic | 40.0% |
| ACGCTTTCAATCTCAAGTGT+CGG | - | chr8_1:59831503-59831522 | Msa1204290:intron | 40.0% | |
| ! | GTATGGAGGCCTTTTTATCA+TGG | - | chr8_1:59831638-59831657 | Msa1204290:CDS | 40.0% |
| ! | GGCCTTTTTATCATGGCTTT+AGG | - | chr8_1:59831645-59831664 | Msa1204290:CDS | 40.0% |
| !! | TGTTTTGCTGACTGCTTTTG+TGG | + | chr8_1:59831711-59831730 | None:intergenic | 40.0% |
| TTTCTGATCTGCATCGAAAG+AGG | + | chr8_1:59831811-59831830 | None:intergenic | 40.0% | |
| TGGCACCAAAACCAACAAAA+CGG | - | chr8_1:59831832-59831851 | Msa1204290:intron | 40.0% | |
| !! | ATCAAATGTGGCCGTTTTGT+TGG | + | chr8_1:59831846-59831865 | None:intergenic | 40.0% |
| CCTGTGACATGTATCAAATG+TGG | + | chr8_1:59831858-59831877 | None:intergenic | 40.0% | |
| CCACATTTGATACATGTCAC+AGG | - | chr8_1:59831855-59831874 | Msa1204290:CDS | 40.0% | |
| ! | ATTTACGTTTGTTGCTGTCG+AGG | - | chr8_1:59831946-59831965 | Msa1204290:CDS | 40.0% |
| TTAAAGAGGCTTCTGTAGCT+TGG | - | chr8_1:59832000-59832019 | Msa1204290:CDS | 40.0% | |
| TGTCATTGTCTTGCCAAGTT+TGG | + | chr8_1:59832117-59832136 | None:intergenic | 40.0% | |
| GACAGATAGTGAAATCACAC+TGG | - | chr8_1:59832133-59832152 | Msa1204290:intron | 40.0% | |
| AATCTACGACCAAACCACAA+GGG | + | chr8_1:59832163-59832182 | None:intergenic | 40.0% | |
| ! | ATCTCTGTCATGTTTTCTCC+AGG | + | chr8_1:59832308-59832327 | None:intergenic | 40.0% |
| !!! | ATGGACTAGTGATTTTGGGT+GGG | - | chr8_1:59832349-59832368 | Msa1204290:intron | 40.0% |
| AGCCTACTAAGGAATGAAGA+TGG | + | chr8_1:59832631-59832650 | None:intergenic | 40.0% | |
| GTAGTTACTACAGCCTACTA+AGG | + | chr8_1:59832642-59832661 | None:intergenic | 40.0% | |
| AACTACATTAGCAACACCTC+AGG | - | chr8_1:59832656-59832675 | Msa1204290:CDS | 40.0% | |
| AAGCAAGATAGCATAACCTG+AGG | + | chr8_1:59832675-59832694 | None:intergenic | 40.0% | |
| AGTTCTATGTGCACTTTCTG+AGG | + | chr8_1:59832875-59832894 | None:intergenic | 40.0% | |
| !! | TTAATCGTGCTGACTAACCA+TGG | + | chr8_1:59833103-59833122 | None:intergenic | 40.0% |
| ! | CTGTTATCAGTTCTGGCTAA+AGG | - | chr8_1:59833142-59833161 | Msa1204290:CDS | 40.0% |
| GGCTAAAGGTTTACCTGTTA+CGG | - | chr8_1:59833156-59833175 | Msa1204290:intron | 40.0% | |
| TGTTGATGTTGAGAACCTGA+AGG | - | chr8_1:59833195-59833214 | Msa1204290:intron | 40.0% | |
| ! | TTGATCGGAGTATTCTCTAC+CGG | - | chr8_1:59833250-59833269 | Msa1204290:intron | 40.0% |
| !! | AAATAACTTTGAGCGCCGAA+TGG | - | chr8_1:59833273-59833292 | Msa1204290:intron | 40.0% |
| GGGTTAAGACTGTTAGAGTA+TGG | + | chr8_1:59833488-59833507 | None:intergenic | 40.0% | |
| TTAGTCCACACTACAGCATT+TGG | + | chr8_1:59833512-59833531 | None:intergenic | 40.0% | |
| CTTCTAAGTCATCTCCTGAT+AGG | - | chr8_1:59834034-59834053 | Msa1204290:CDS | 40.0% | |
| !! | CTTTGAGTTTTCTTTCCTGG+TGG | + | chr8_1:59834289-59834308 | None:intergenic | 40.0% |
| ! | AAACTTCATGATGGGAAAGG+AGG | + | chr8_1:59834323-59834342 | None:intergenic | 40.0% |
| CTTTACTTGATTGTTGGGAC+TGG | - | chr8_1:59834421-59834440 | Msa1204290:intron | 40.0% | |
| CACTCACTATTGGAACACTT+GGG | - | chr8_1:59834599-59834618 | Msa1204290:intron | 40.0% | |
| !! | TCTCACCTTACGGTTTTGTA+AGG | - | chr8_1:59834724-59834743 | Msa1204290:intron | 40.0% |
| TTGTTCAATCCATATGCCCA+TGG | + | chr8_1:59835018-59835037 | None:intergenic | 40.0% | |
| ! | GATGAGAGGTTTTACAATGC+TGG | - | chr8_1:59835074-59835093 | Msa1204290:intron | 40.0% |
| !! | AAGGATGGTGTTATGCCTTT+GGG | - | chr8_1:59835136-59835155 | Msa1204290:five_prime_UTR | 40.0% |
| AGGTATGAGTGTTTCACACC+TGG | - | chr8_1:59830659-59830678 | Msa1204290:three_prime_UTR | 45.0% | |
| CGCTTTCAATCTCAAGTGTC+GGG | - | chr8_1:59831504-59831523 | Msa1204290:intron | 45.0% | |
| ! | GCTTTCAATCTCAAGTGTCG+GGG | - | chr8_1:59831505-59831524 | Msa1204290:intron | 45.0% |
| !!! | TGTGGCCGTTTTGTTGGTTT+TGG | + | chr8_1:59831840-59831859 | None:intergenic | 45.0% |
| CCAAGTTTGGTCACAGAGAA+TGG | + | chr8_1:59832104-59832123 | None:intergenic | 45.0% | |
| CCATTCTCTGTGACCAAACT+TGG | - | chr8_1:59832101-59832120 | Msa1204290:intron | 45.0% | |
| GAATCTACGACCAAACCACA+AGG | + | chr8_1:59832164-59832183 | None:intergenic | 45.0% | |
| AGCTTTCAGATTGAGCTAGC+TGG | - | chr8_1:59832224-59832243 | Msa1204290:CDS | 45.0% | |
| !!! | CATGGACTAGTGATTTTGGG+TGG | - | chr8_1:59832348-59832367 | Msa1204290:intron | 45.0% |
| !!! | TGGACTAGTGATTTTGGGTG+GGG | - | chr8_1:59832350-59832369 | Msa1204290:intron | 45.0% |
| TGTTAGCAGAACCATGAGCA+GGG | + | chr8_1:59832391-59832410 | None:intergenic | 45.0% | |
| ATGTTAGCAGAACCATGAGC+AGG | + | chr8_1:59832392-59832411 | None:intergenic | 45.0% | |
| ATCCTTTCACTGCCACATTG+TGG | - | chr8_1:59832920-59832939 | Msa1204290:intron | 45.0% | |
| TCCTTTCACTGCCACATTGT+GGG | - | chr8_1:59832921-59832940 | Msa1204290:intron | 45.0% | |
| CGATGCAGAATCTTGAACCA+TGG | - | chr8_1:59833083-59833102 | Msa1204290:CDS | 45.0% | |
| GTCAGCACGATTAAAGTAGC+AGG | - | chr8_1:59833109-59833128 | Msa1204290:CDS | 45.0% | |
| CTCCAGCTATCCCTAGAAAA+AGG | - | chr8_1:59833218-59833237 | Msa1204290:intron | 45.0% | |
| !! | AGCCTTTTTCTAGGGATAGC+TGG | + | chr8_1:59833223-59833242 | None:intergenic | 45.0% |
| ! | TCGGCGCTCAAAGTTATTTC+CGG | + | chr8_1:59833272-59833291 | None:intergenic | 45.0% |
| TACAGCCTCATATTGCATCC+AGG | + | chr8_1:59833311-59833330 | None:intergenic | 45.0% | |
| CAATATGAGGCTGTACGTTC+TGG | - | chr8_1:59833316-59833335 | Msa1204290:intron | 45.0% | |
| TCCACACTACAGCATTTGGT+GGG | + | chr8_1:59833508-59833527 | None:intergenic | 45.0% | |
| AAGTGCTTTCCAGCCTCAAA+GGG | - | chr8_1:59833977-59833996 | Msa1204290:CDS | 45.0% | |
| GTCATCTCCTGATAGGGATA+AGG | - | chr8_1:59834041-59834060 | Msa1204290:CDS | 45.0% | |
| TTGCTGTCCTTATCCCTATC+AGG | + | chr8_1:59834051-59834070 | None:intergenic | 45.0% | |
| ATAGGGATAAGGACAGCAAG+TGG | - | chr8_1:59834052-59834071 | Msa1204290:CDS | 45.0% | |
| ACATGATACGTACCCACCAT+GGG | - | chr8_1:59834208-59834227 | Msa1204290:CDS | 45.0% | |
| TCGCGAGATATGACATATCC+AGG | + | chr8_1:59834242-59834261 | None:intergenic | 45.0% | |
| CTCATCAAATGTGGGACTCT+TGG | + | chr8_1:59834453-59834472 | None:intergenic | 45.0% | |
| !! | TGGCCCAATGGGTTTTTGTT+AGG | + | chr8_1:59834581-59834600 | None:intergenic | 45.0% |
| CCAAGTGTTCCAATAGTGAG+TGG | + | chr8_1:59834601-59834620 | None:intergenic | 45.0% | |
| CCACTCACTATTGGAACACT+TGG | - | chr8_1:59834598-59834617 | Msa1204290:intron | 45.0% | |
| ACACTCCATATGTCCAGTCT+TGG | - | chr8_1:59834624-59834643 | Msa1204290:intron | 45.0% | |
| CACTCCATATGTCCAGTCTT+GGG | - | chr8_1:59834625-59834644 | Msa1204290:intron | 45.0% | |
| ATATGTCATACGCCCAAGAC+TGG | + | chr8_1:59834640-59834659 | None:intergenic | 45.0% | |
| ! | GGCCCGATCCAAATTTTAAG+AGG | - | chr8_1:59834756-59834775 | Msa1204290:intron | 45.0% |
| AAGATGTTGCCATGGGCATA+TGG | - | chr8_1:59835006-59835025 | Msa1204290:intron | 45.0% | |
| !! | GAAGGATGGTGTTATGCCTT+TGG | - | chr8_1:59835135-59835154 | Msa1204290:five_prime_UTR | 45.0% |
| CTTTCTGCAGTTTCTCCCAA+AGG | + | chr8_1:59835154-59835173 | None:intergenic | 45.0% | |
| !! | TAAAAAATAAATAACAAATA+AGG | + | chr8_1:59833886-59833905 | None:intergenic | 5.0% |
| !! | ATAGAAAAATAAAAATTTAT+GGG | + | chr8_1:59834155-59834174 | None:intergenic | 5.0% |
| !! | AATAGAAAAATAAAAATTTA+TGG | + | chr8_1:59834156-59834175 | None:intergenic | 5.0% |
| ATATAGGAGTCCCCGTTGTG+AGG | - | chr8_1:59831205-59831224 | Msa1204290:intron | 50.0% | |
| TGGAGGAAGGAGCCATTTCT+AGG | + | chr8_1:59831240-59831259 | None:intergenic | 50.0% | |
| GCTTTGCCCGAAATAGCTCA+AGG | - | chr8_1:59831975-59831994 | Msa1204290:CDS | 50.0% | |
| ATCACACTGGATCTCCCTTG+TGG | - | chr8_1:59832146-59832165 | Msa1204290:intron | 50.0% | |
| ACTGGATCTCCCTTGTGGTT+TGG | - | chr8_1:59832151-59832170 | Msa1204290:intron | 50.0% | |
| ACACTGATCGGCATCCCTAA+TGG | - | chr8_1:59832191-59832210 | Msa1204290:CDS | 50.0% | |
| AGCTGGACAAGAGCTAGAAG+AGG | - | chr8_1:59832241-59832260 | Msa1204290:CDS | 50.0% | |
| !! | GGACTAGTGATTTTGGGTGG+GGG | - | chr8_1:59832351-59832370 | Msa1204290:intron | 50.0% |
| !! | TGATTTTGGGTGGGGGAAAG+AGG | - | chr8_1:59832358-59832377 | Msa1204290:intron | 50.0% |
| GGTTCTGCTAACATCCGCAA+AGG | - | chr8_1:59832398-59832417 | Msa1204290:intron | 50.0% | |
| ACCCACAATGTGGCAGTGAA+AGG | + | chr8_1:59832925-59832944 | None:intergenic | 50.0% | |
| TTCACTGCCACATTGTGGGT+TGG | - | chr8_1:59832925-59832944 | Msa1204290:intron | 50.0% | |
| TCACTGCCACATTGTGGGTT+GGG | - | chr8_1:59832926-59832945 | Msa1204290:intron | 50.0% | |
| TTCTGACCCAACCCACAATG+TGG | + | chr8_1:59832935-59832954 | None:intergenic | 50.0% | |
| !! | ACATTGTGGGTTGGGTCAGA+AGG | - | chr8_1:59832934-59832953 | Msa1204290:CDS | 50.0% |
| GAGGTCCTGGATGCAATATG+AGG | - | chr8_1:59833303-59833322 | Msa1204290:intron | 50.0% | |
| ACCCACCAAATGCTGTAGTG+TGG | - | chr8_1:59833504-59833523 | Msa1204290:intron | 50.0% | |
| GTCCACACTACAGCATTTGG+TGG | + | chr8_1:59833509-59833528 | None:intergenic | 50.0% | |
| TGGACGGAAGCTCAAGCATA+TGG | - | chr8_1:59833658-59833677 | Msa1204290:CDS | 50.0% | |
| ! | GAAGTGCTTTCCAGCCTCAA+AGG | - | chr8_1:59833976-59833995 | Msa1204290:CDS | 50.0% |
| CTTCAGATGGCTTCCCTTTG+AGG | + | chr8_1:59833993-59834012 | None:intergenic | 50.0% | |
| CTCAAAGGGAAGCCATCTGA+AGG | - | chr8_1:59833991-59834010 | Msa1204290:CDS | 50.0% | |
| CCATCTGAAGGCCTCTTGTA+CGG | - | chr8_1:59834003-59834022 | Msa1204290:CDS | 50.0% | |
| CAAGTGGTACATCAGTGACG+AGG | - | chr8_1:59834068-59834087 | Msa1204290:CDS | 50.0% | |
| ACACACACACACACACACAC+AGG | + | chr8_1:59834100-59834119 | None:intergenic | 50.0% | |
| CACATGATACGTACCCACCA+TGG | - | chr8_1:59834207-59834226 | Msa1204290:CDS | 50.0% | |
| ATTCGTTGTCTTTGGCCACC+AGG | - | chr8_1:59834271-59834290 | Msa1204290:CDS | 50.0% | |
| CCAATAGTGAGTGGCCCAAT+GGG | + | chr8_1:59834592-59834611 | None:intergenic | 50.0% | |
| TCCAATAGTGAGTGGCCCAA+TGG | + | chr8_1:59834593-59834612 | None:intergenic | 50.0% | |
| TACGCCCAAGACTGGACATA+TGG | + | chr8_1:59834632-59834651 | None:intergenic | 50.0% | |
| GAGTGTTTCACACCTGGAGC+TGG | - | chr8_1:59830665-59830684 | Msa1204290:three_prime_UTR | 55.0% | |
| GAGGAAAGATGCCCTGCTCA+TGG | - | chr8_1:59832377-59832396 | Msa1204290:intron | 55.0% | |
| TAGGGATAGCTGGAGCCTTC+AGG | + | chr8_1:59833213-59833232 | None:intergenic | 55.0% | |
| AGGACCTCCTCAGAGCCATT+CGG | + | chr8_1:59833291-59833310 | None:intergenic | 55.0% | |
| !! | AGATGGCTTCCCTTTGAGGC+TGG | + | chr8_1:59833989-59834008 | None:intergenic | 55.0% |
| CCGTACAAGAGGCCTTCAGA+TGG | + | chr8_1:59834006-59834025 | None:intergenic | 55.0% | |
| TATCCAGGACCATGTGCCCA+TGG | + | chr8_1:59834227-59834246 | None:intergenic | 55.0% | |
| CCCATTGGGCCACTCACTAT+TGG | - | chr8_1:59834589-59834608 | Msa1204290:intron | 55.0% | |
| TGGGGGCAGTTCTCACCTTA+CGG | - | chr8_1:59834714-59834733 | Msa1204290:intron | 55.0% | |
| TTCACACCTGGAGCTGGAGC+TGG | - | chr8_1:59830671-59830690 | Msa1204290:three_prime_UTR | 60.0% | |
| !! | TTGAGCGCCGAATGGCTCTG+AGG | - | chr8_1:59833281-59833300 | Msa1204290:intron | 60.0% |
| !! | GAATGGCTCTGAGGAGGTCC+TGG | - | chr8_1:59833290-59833309 | Msa1204290:intron | 60.0% |
| ACGTACCCACCATGGGCACA+TGG | - | chr8_1:59834215-59834234 | Msa1204290:CDS | 60.0% | |
| CAGGACCATGTGCCCATGGT+GGG | + | chr8_1:59834223-59834242 | None:intergenic | 60.0% | |
| !! | AGCGCCGAATGGCTCTGAGG+AGG | - | chr8_1:59833284-59833303 | Msa1204290:intron | 65.0% |
| CCAGGACCATGTGCCCATGG+TGG | + | chr8_1:59834224-59834243 | None:intergenic | 65.0% | |
| CCACCATGGGCACATGGTCC+TGG | - | chr8_1:59834221-59834240 | Msa1204290:CDS | 65.0% | |
| CCAGCTCCAGCTCCAGCTCC+AGG | + | chr8_1:59830680-59830699 | None:intergenic | 70.0% | |
| CCTGGAGCTGGAGCTGGAGC+TGG | - | chr8_1:59830677-59830696 | Msa1204290:three_prime_UTR | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 59830595 | 59835340 | 59830595 | ID=Msa1204290;Name=Msa1204290 |
| chr8_1 | mRNA | 59830595 | 59835340 | 59830595 | ID=Msa1204290-mRNA-1;Parent=Msa1204290;Name=Msa1204290-mRNA-1;_AED=0.16;_eAED=0.16;_QI=253|1|1|1|0.85|0.75|8|141|642 |
| chr8_1 | exon | 59830595 | 59830942 | 59830595 | ID=Msa1204290-mRNA-1:exon:19370;Parent=Msa1204290-mRNA-1 |
| chr8_1 | exon | 59831628 | 59831735 | 59831628 | ID=Msa1204290-mRNA-1:exon:19369;Parent=Msa1204290-mRNA-1 |
| chr8_1 | exon | 59831846 | 59832022 | 59831846 | ID=Msa1204290-mRNA-1:exon:19368;Parent=Msa1204290-mRNA-1 |
| chr8_1 | exon | 59832179 | 59832307 | 59832179 | ID=Msa1204290-mRNA-1:exon:19367;Parent=Msa1204290-mRNA-1 |
| chr8_1 | exon | 59832566 | 59832844 | 59832566 | ID=Msa1204290-mRNA-1:exon:19366;Parent=Msa1204290-mRNA-1 |
| chr8_1 | exon | 59832927 | 59833162 | 59832927 | ID=Msa1204290-mRNA-1:exon:19365;Parent=Msa1204290-mRNA-1 |
| chr8_1 | exon | 59833516 | 59834341 | 59833516 | ID=Msa1204290-mRNA-1:exon:19364;Parent=Msa1204290-mRNA-1 |
| chr8_1 | exon | 59835121 | 59835340 | 59835121 | ID=Msa1204290-mRNA-1:exon:19363;Parent=Msa1204290-mRNA-1 |
| chr8_1 | five_prime_UTR | 59835121 | 59835340 | 59835121 | ID=Msa1204290-mRNA-1:five_prime_utr;Parent=Msa1204290-mRNA-1 |
| chr8_1 | five_prime_UTR | 59834309 | 59834341 | 59834309 | ID=Msa1204290-mRNA-1:five_prime_utr;Parent=Msa1204290-mRNA-1 |
| chr8_1 | CDS | 59833516 | 59834308 | 59833516 | ID=Msa1204290-mRNA-1:cds;Parent=Msa1204290-mRNA-1 |
| chr8_1 | CDS | 59832927 | 59833162 | 59832927 | ID=Msa1204290-mRNA-1:cds;Parent=Msa1204290-mRNA-1 |
| chr8_1 | CDS | 59832566 | 59832844 | 59832566 | ID=Msa1204290-mRNA-1:cds;Parent=Msa1204290-mRNA-1 |
| chr8_1 | CDS | 59832179 | 59832307 | 59832179 | ID=Msa1204290-mRNA-1:cds;Parent=Msa1204290-mRNA-1 |
| chr8_1 | CDS | 59831846 | 59832022 | 59831846 | ID=Msa1204290-mRNA-1:cds;Parent=Msa1204290-mRNA-1 |
| chr8_1 | CDS | 59831628 | 59831735 | 59831628 | ID=Msa1204290-mRNA-1:cds;Parent=Msa1204290-mRNA-1 |
| chr8_1 | CDS | 59830736 | 59830942 | 59830736 | ID=Msa1204290-mRNA-1:cds;Parent=Msa1204290-mRNA-1 |
| chr8_1 | three_prime_UTR | 59830595 | 59830735 | 59830595 | ID=Msa1204290-mRNA-1:three_prime_utr;Parent=Msa1204290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
