Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1204310 | XP_013458343.1 | 97.196 | 642 | 18 | 0 | 1 | 642 | 1 | 642 | 0.0 | 1300 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1204310 | sp|Q9ASW1|B3GTG_ARATH | 53.715 | 646 | 250 | 8 | 1 | 642 | 19 | 619 | 0.0 | 686 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1204310 | A0A072URG8 | 97.196 | 642 | 18 | 0 | 1 | 642 | 1 | 642 | 0.0 | 1300 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0683490 | Msa1204310 | 0.824171 | 9.325581e-54 | -8.615850e-47 |
| Msa0711400 | Msa1204310 | 0.818918 | 1.525261e-52 | -8.615850e-47 |
| Msa0221000 | Msa1204310 | 0.817867 | 2.638552e-52 | -8.615850e-47 |
| Msa0430260 | Msa1204310 | 0.810425 | 1.159963e-50 | -8.615850e-47 |
| Msa0474730 | Msa1204310 | 0.801481 | 8.821994e-49 | -8.615850e-47 |
| Msa0337700 | Msa1204310 | 0.800285 | 1.548656e-48 | -8.615850e-47 |
| Msa1124950 | Msa1204310 | 0.809646 | 1.707494e-50 | -8.615850e-47 |
| Msa1204290 | Msa1204310 | 0.914548 | 1.683885e-84 | -8.615850e-47 |
| Msa1204310 | Msa1206230 | 0.802510 | 5.422039e-49 | -8.615850e-47 |
| Msa1204310 | Msa1209420 | 0.819152 | 1.349612e-52 | -8.615850e-47 |
| Msa1204310 | Msa1371910 | 0.805054 | 1.606122e-49 | -8.615850e-47 |
| Msa1204310 | Msa1439290 | 0.913526 | 5.558232e-84 | -8.615850e-47 |
| Msa1204310 | Msa1440960 | 0.801535 | 8.602028e-49 | -8.615850e-47 |
| Msa1204310 | Msa1451470 | 0.939530 | 1.089392e-99 | -8.615850e-47 |
| Msa0500380 | Msa1204310 | 0.810058 | 1.392359e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1204310 | MtrunA17_Chr4g0068981 | 97.196 | 642 | 18 | 0 | 1 | 642 | 1 | 642 | 0.0 | 1300 |
| Msa1204310 | MtrunA17_Chr5g0417441 | 49.614 | 647 | 307 | 8 | 1 | 641 | 1 | 634 | 0.0 | 619 |
| Msa1204310 | MtrunA17_Chr2g0285521 | 36.460 | 565 | 316 | 12 | 110 | 641 | 132 | 686 | 8.08e-112 | 351 |
| Msa1204310 | MtrunA17_Chr4g0059801 | 37.477 | 539 | 304 | 15 | 120 | 641 | 90 | 612 | 3.66e-110 | 344 |
| Msa1204310 | MtrunA17_Chr5g0415331 | 35.907 | 557 | 319 | 14 | 116 | 641 | 91 | 640 | 2.63e-106 | 335 |
| Msa1204310 | MtrunA17_Chr8g0363761 | 34.532 | 556 | 322 | 15 | 116 | 641 | 106 | 649 | 8.08e-102 | 323 |
| Msa1204310 | MtrunA17_Chr8g0360581 | 25.954 | 262 | 173 | 9 | 391 | 641 | 80 | 331 | 3.88e-12 | 68.2 |
| Msa1204310 | MtrunA17_Chr2g0316241 | 25.670 | 261 | 175 | 9 | 391 | 641 | 74 | 325 | 4.41e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1204310 | AT3G06440.1 | 53.715 | 646 | 250 | 8 | 1 | 642 | 19 | 619 | 0.0 | 686 |
| Msa1204310 | AT3G06440.2 | 51.008 | 645 | 240 | 9 | 1 | 642 | 19 | 590 | 0.0 | 633 |
| Msa1204310 | AT1G26810.2 | 47.005 | 651 | 324 | 7 | 1 | 641 | 1 | 640 | 0.0 | 582 |
| Msa1204310 | AT1G26810.1 | 47.005 | 651 | 324 | 7 | 1 | 641 | 1 | 640 | 0.0 | 582 |
| Msa1204310 | AT5G62620.1 | 38.372 | 516 | 280 | 10 | 157 | 641 | 170 | 678 | 1.09e-112 | 353 |
| Msa1204310 | AT1G74800.1 | 37.024 | 551 | 316 | 13 | 113 | 641 | 128 | 669 | 3.01e-110 | 347 |
| Msa1204310 | AT1G27120.2 | 36.502 | 526 | 301 | 11 | 139 | 641 | 124 | 639 | 2.33e-107 | 338 |
| Msa1204310 | AT1G27120.1 | 36.742 | 528 | 297 | 11 | 139 | 641 | 155 | 670 | 3.47e-107 | 338 |
| Msa1204310 | AT4G21060.2 | 35.110 | 544 | 315 | 13 | 128 | 641 | 146 | 681 | 6.80e-102 | 325 |
| Msa1204310 | AT4G21060.1 | 35.110 | 544 | 315 | 13 | 128 | 641 | 203 | 738 | 2.27e-101 | 325 |
| Msa1204310 | AT5G62620.2 | 36.080 | 449 | 249 | 10 | 157 | 574 | 170 | 611 | 3.32e-81 | 269 |
| Msa1204310 | AT2G26100.1 | 26.641 | 259 | 175 | 6 | 391 | 641 | 107 | 358 | 1.66e-16 | 82.4 |
| Msa1204310 | AT3G14960.1 | 27.969 | 261 | 173 | 7 | 389 | 641 | 79 | 332 | 3.51e-16 | 80.9 |
| Msa1204310 | AT1G53290.1 | 26.899 | 316 | 195 | 11 | 352 | 641 | 29 | 334 | 1.91e-15 | 78.6 |
| Msa1204310 | AT2G26100.2 | 26.106 | 226 | 155 | 3 | 391 | 610 | 107 | 326 | 2.17e-15 | 78.6 |
Find 135 sgRNAs with CRISPR-Local
Find 311 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACAATTGCAATTTGCATTT+TGG | 0.096764 | 8_1:-59888628 | Msa1204310:CDS |
| AATACATGGACTAGTGATTT+TGG | 0.137369 | 8_1:-59890016 | Msa1204310:CDS |
| TTTCTACTGTACAGTCTTAA+AGG | 0.188302 | 8_1:-59890682 | Msa1204310:CDS |
| GAAACGGTTATATTTATTTC+AGG | 0.207606 | 8_1:-59890767 | Msa1204310:five_prime_UTR |
| AATCAACAAAAGGCATTAAT+TGG | 0.212309 | 8_1:+59888673 | None:intergenic |
| TTTAACTCCTTGAGCTATTT+CGG | 0.214747 | 8_1:+59890378 | None:intergenic |
| TTTACTCAAACATTTGAATT+AGG | 0.219468 | 8_1:-59891589 | Msa1204310:five_prime_UTR |
| TGCAAGATAATTGGAGGATT+TGG | 0.247383 | 8_1:+59890094 | None:intergenic |
| AAAGGATTAGCCTCAGAAAA+AGG | 0.248836 | 8_1:+59889456 | None:intergenic |
| GCATATGGATTGAACAATTT+AGG | 0.250872 | 8_1:-59887325 | Msa1204310:CDS |
| TTAACTCCTTGAGCTATTTC+GGG | 0.251324 | 8_1:+59890379 | None:intergenic |
| TTTAAGTCTGTTATCAGTTC+TGG | 0.251836 | 8_1:-59889225 | Msa1204310:CDS |
| ATAGAGTTAATCTTGAATTA+TGG | 0.276791 | 8_1:-59888722 | Msa1204310:CDS |
| ATAGCAAAATTCGTTGTCTT+TGG | 0.279953 | 8_1:-59888083 | Msa1204310:CDS |
| GATATCTACTCACAACATTC+TGG | 0.289356 | 8_1:+59887164 | None:intergenic |
| CATTATAATGTGAGTCTTCC+TGG | 0.290225 | 8_1:-59890073 | Msa1204310:CDS |
| ACATTATAATGCAAGATAAT+TGG | 0.291182 | 8_1:+59890085 | None:intergenic |
| GGATTTCATATGACTGTAAA+TGG | 0.300607 | 8_1:-59889405 | Msa1204310:CDS |
| CTTCAGATGGCTTCCCTTTG+AGG | 0.308752 | 8_1:+59888370 | None:intergenic |
| TACCTAAAGCCATGATAAAA+AGG | 0.316882 | 8_1:+59890713 | None:intergenic |
| TAGGGATAGCTGGAGCCTTC+AGG | 0.328328 | 8_1:+59889150 | None:intergenic |
| CAATGAATGTTGTACTTGTT+TGG | 0.333423 | 8_1:-59890441 | Msa1204310:CDS |
| TGTCATTGTCTTGCCAAGTT+TGG | 0.340771 | 8_1:+59890246 | None:intergenic |
| CAAGGATGGTGTTATGCCTT+TGG | 0.341498 | 8_1:-59887211 | Msa1204310:CDS |
| TCGGCGCTCAAAGTTATTTC+CGG | 0.341737 | 8_1:+59889091 | None:intergenic |
| CTCCAGCTATCCCTAGAAAA+AGG | 0.342285 | 8_1:-59889142 | Msa1204310:CDS |
| CTTCTAAGTCATCTCCTGAT+AGG | 0.344437 | 8_1:-59888326 | Msa1204310:CDS |
| TAATAACTCTGTTGATTATG+AGG | 0.354468 | 8_1:-59887122 | Msa1204310:three_prime_UTR |
| TCACTGCCACATTGTGGGTT+GGG | 0.361190 | 8_1:-59889434 | Msa1204310:CDS |
| ATATCATTATCTTCCGTAAC+AGG | 0.362656 | 8_1:+59889191 | None:intergenic |
| TTGCTGTCCTTATCCCTATC+AGG | 0.368376 | 8_1:+59888312 | None:intergenic |
| ACTGGATCTCCCTTGTGGTT+TGG | 0.371403 | 8_1:-59890209 | Msa1204310:CDS |
| TTTCGATGCAGATCAGAAAA+TGG | 0.377851 | 8_1:-59890548 | Msa1204310:CDS |
| CCAAGTTTGGTCACAGAGAA+TGG | 0.379786 | 8_1:+59890259 | None:intergenic |
| CCATTCTCTGTGACCAAACT+TGG | 0.381533 | 8_1:-59890259 | Msa1204310:CDS |
| TCCTTTCACTGCCACATTGT+GGG | 0.385409 | 8_1:-59889439 | Msa1204310:CDS |
| GGCTAAAGGTTTACCTGTTA+CGG | 0.394794 | 8_1:-59889204 | Msa1204310:CDS |
| TTCACTGCCACATTGTGGGT+TGG | 0.395199 | 8_1:-59889435 | Msa1204310:CDS |
| AAGGATGGTGTTATGCCTTT+GGG | 0.400443 | 8_1:-59887210 | Msa1204310:CDS |
| CTGTTATCAGTTCTGGCTAA+AGG | 0.403419 | 8_1:-59889218 | Msa1204310:CDS |
| CTTTCTGAGGAAATATTAGA+AGG | 0.408472 | 8_1:+59889501 | None:intergenic |
| ACACTGATCGGCATCCCTAA+TGG | 0.427912 | 8_1:-59890169 | Msa1204310:CDS |
| AAGATGTTGCCATGGGCATA+TGG | 0.431266 | 8_1:-59887340 | Msa1204310:CDS |
| TAGAATCATTTGGTGGTGAA+TGG | 0.435315 | 8_1:+59890605 | None:intergenic |
| CCACCATGGGCACATGGTCC+TGG | 0.440633 | 8_1:-59888125 | Msa1204310:CDS |
| AGATGGCTTCCCTTTGAGGC+TGG | 0.441178 | 8_1:+59888374 | None:intergenic |
| CAAAGGCATAACACCATCCT+TGG | 0.450169 | 8_1:+59887212 | None:intergenic |
| TTAAAGAGGCTTCTGTAGCT+TGG | 0.451470 | 8_1:-59890360 | Msa1204310:CDS |
| GAATGGCTCTGAGGAGGTCC+TGG | 0.454334 | 8_1:-59889070 | Msa1204310:CDS |
| TGGACGGAAGCTCAAGCATA+TGG | 0.456280 | 8_1:-59888702 | Msa1204310:CDS |
| TTGAAAATGAAGAAGTGGTA+TGG | 0.458715 | 8_1:-59890739 | Msa1204310:exon |
| CAGATGATGATGCTTTCATA+AGG | 0.464275 | 8_1:-59888413 | Msa1204310:CDS |
| GTCATCTCCTGATAGGGATA+AGG | 0.468655 | 8_1:-59888319 | Msa1204310:CDS |
| CTTTCTGCAGTTTCTCCCAA+AGG | 0.470786 | 8_1:+59887195 | None:intergenic |
| CAATATGAGGCTGTACGTTC+TGG | 0.471244 | 8_1:-59889044 | Msa1204310:CDS |
| AAACGGTTATATTTATTTCA+GGG | 0.474514 | 8_1:-59890766 | Msa1204310:five_prime_UTR |
| AACTCACCAGCTCCAGCTCC+AGG | 0.475303 | 8_1:+59891677 | None:intergenic |
| ATCCTTTCACTGCCACATTG+TGG | 0.477470 | 8_1:-59889440 | Msa1204310:CDS |
| GTCTATCTTACTAATCTTCG+AGG | 0.478025 | 8_1:+59890303 | None:intergenic |
| ATTCGTTGTCTTTGGCCACC+AGG | 0.479400 | 8_1:-59888075 | Msa1204310:CDS |
| TTATGAATATGGTGGTGAAT+AGG | 0.483953 | 8_1:-59891715 | None:intergenic |
| GTCAGCACGATTAAAGTAGC+AGG | 0.484951 | 8_1:-59889251 | Msa1204310:CDS |
| AGCTTTCAGATTGAGCTAGC+TGG | 0.485254 | 8_1:-59890136 | Msa1204310:CDS |
| ATTGAACAATTTAGGAATGG+TGG | 0.485712 | 8_1:-59887317 | Msa1204310:CDS |
| AAACTATAATAATCAACAAA+AGG | 0.494113 | 8_1:+59888663 | None:intergenic |
| TTCACACCTGGAGCTGGAGC+TGG | 0.495309 | 8_1:-59891683 | Msa1204310:five_prime_UTR |
| TTTCTGATCTGCATCGAAAG+AGG | 0.495941 | 8_1:+59890552 | None:intergenic |
| GAGTGTTTCACACCTGGAGC+TGG | 0.501124 | 8_1:-59891689 | Msa1204310:five_prime_UTR |
| TTCTAAGTCATCTCCTGATA+GGG | 0.503233 | 8_1:-59888325 | Msa1204310:CDS |
| TTGATCGGAGTATTCTCTAC+CGG | 0.508883 | 8_1:-59889110 | Msa1204310:CDS |
| AGGACCTCCTCAGAGCCATT+CGG | 0.510477 | 8_1:+59889072 | None:intergenic |
| CTCTTTCAAATTCACATATG+CGG | 0.510976 | 8_1:-59891626 | Msa1204310:five_prime_UTR |
| TCATGCTAAATATACCTTTG+CGG | 0.511523 | 8_1:+59889948 | None:intergenic |
| CGTATATTGTTCAAAATACA+TGG | 0.517784 | 8_1:-59890030 | Msa1204310:CDS |
| ACATTGTGGGTTGGGTCAGA+AGG | 0.519182 | 8_1:-59889426 | Msa1204310:CDS |
| TCGCGAGATATGACATATCC+AGG | 0.523922 | 8_1:+59888107 | None:intergenic |
| GAAGTGCTTTCCAGCCTCAA+AGG | 0.527978 | 8_1:-59888384 | Msa1204310:CDS |
| ATGTTAGCAGAACCATGAGC+AGG | 0.528160 | 8_1:+59889971 | None:intergenic |
| ACCCACAATGTGGCAGTGAA+AGG | 0.532066 | 8_1:+59889438 | None:intergenic |
| GATTCTTCTATTACACTGAT+CGG | 0.533821 | 8_1:-59890181 | Msa1204310:CDS |
| TAAATTAGAAGATGTTGCCA+TGG | 0.541216 | 8_1:-59887348 | Msa1204310:CDS |
| GTTTATTCAGCACAACATCA+AGG | 0.542401 | 8_1:-59891567 | Msa1204310:intron |
| TGGCACCAAAACCAACAAAA+CGG | 0.544787 | 8_1:-59890528 | Msa1204310:CDS |
| AAATAACTTTGAGCGCCGAA+TGG | 0.546477 | 8_1:-59889087 | Msa1204310:CDS |
| AAGTGCTTTCCAGCCTCAAA+GGG | 0.551248 | 8_1:-59888383 | Msa1204310:CDS |
| AGTTCTATGTGCACTTTCTG+AGG | 0.553560 | 8_1:+59889488 | None:intergenic |
| AAATTAGAAGATGTTGCCAT+GGG | 0.554916 | 8_1:-59887347 | Msa1204310:CDS |
| CCACATTTGATACATGTCAC+AGG | 0.555339 | 8_1:-59890505 | Msa1204310:CDS |
| CCATCTGAAGGCCTCTTGTA+CGG | 0.556208 | 8_1:-59888357 | Msa1204310:CDS |
| TCTTTAATAGAATCATTTGG+TGG | 0.557042 | 8_1:+59890598 | None:intergenic |
| TGGATTGAACAATTTAGGAA+TGG | 0.558371 | 8_1:-59887320 | Msa1204310:CDS |
| TTATAATGCAAGATAATTGG+AGG | 0.560890 | 8_1:+59890088 | None:intergenic |
| GTTTATTGAAAATGAAGAAG+TGG | 0.561747 | 8_1:-59890744 | Msa1204310:exon |
| GAGGAAAGATGCCCTGCTCA+TGG | 0.566659 | 8_1:-59889983 | Msa1204310:CDS |
| CTCAAAGGGAAGCCATCTGA+AGG | 0.569898 | 8_1:-59888369 | Msa1204310:CDS |
| CACATGATACGTACCCACCA+TGG | 0.571594 | 8_1:-59888139 | Msa1204310:CDS |
| TTCATATGACTGTAAATGGA+AGG | 0.574417 | 8_1:-59889401 | Msa1204310:CDS |
| ATTTACGTTTGTTGCTGTCG+AGG | 0.575180 | 8_1:-59890414 | Msa1204310:CDS |
| AATAGCTCAAGGAGTTAAAG+AGG | 0.578574 | 8_1:-59890374 | Msa1204310:CDS |
| AGGTATGAGTGTTTCACACC+TGG | 0.578684 | 8_1:-59891695 | Msa1204310:five_prime_UTR |
| CGATGCAGAATCTTGAACCA+TGG | 0.589458 | 8_1:-59889277 | Msa1204310:intron |
| ACATGATACGTACCCACCAT+GGG | 0.589834 | 8_1:-59888138 | Msa1204310:CDS |
| CAGGACCATGTGCCCATGGT+GGG | 0.590057 | 8_1:+59888126 | None:intergenic |
| TATCCAGGACCATGTGCCCA+TGG | 0.590642 | 8_1:+59888122 | None:intergenic |
| TACAGCCTCATATTGCATCC+AGG | 0.592681 | 8_1:+59889052 | None:intergenic |
| TTCATTATGAGAATGATGAG+AGG | 0.592883 | 8_1:-59887286 | Msa1204310:CDS |
| ATCACACTGGATCTCCCTTG+TGG | 0.593261 | 8_1:-59890214 | Msa1204310:CDS |
| TTGCGCATTATCAAAATCCA+AGG | 0.595140 | 8_1:-59887229 | Msa1204310:CDS |
| ACGTACCCACCATGGGCACA+TGG | 0.599828 | 8_1:-59888131 | Msa1204310:CDS |
| GAGCAGTACTTCAGAAACAA+AGG | 0.602118 | 8_1:+59891653 | None:intergenic |
| CACATTTGATACATGTCACA+GGG | 0.607371 | 8_1:-59890504 | Msa1204310:CDS |
| TTAATCGTGCTGACTAACCA+TGG | 0.610947 | 8_1:+59889260 | None:intergenic |
| AAGATATTAGACCGTACAAG+AGG | 0.616932 | 8_1:+59888346 | None:intergenic |
| AAAATGAAGAAGTGGTATGG+AGG | 0.619161 | 8_1:-59890736 | Msa1204310:CDS |
| AGTTAATCTTGAATTATGGA+CGG | 0.620195 | 8_1:-59888718 | Msa1204310:CDS |
| AGCTGGACAAGAGCTAGAAG+AGG | 0.621403 | 8_1:-59890119 | Msa1204310:CDS |
| CCAGGACCATGTGCCCATGG+TGG | 0.623499 | 8_1:+59888125 | None:intergenic |
| CCGTACAAGAGGCCTTCAGA+TGG | 0.626770 | 8_1:+59888357 | None:intergenic |
| GAATCTACGACCAAACCACA+AGG | 0.628470 | 8_1:+59890199 | None:intergenic |
| TTGTTCAATCCATATGCCCA+TGG | 0.632568 | 8_1:+59887331 | None:intergenic |
| AGCGCCGAATGGCTCTGAGG+AGG | 0.634744 | 8_1:-59889076 | Msa1204310:CDS |
| GCATTATCAAAATCCAAGGA+TGG | 0.638592 | 8_1:-59887225 | Msa1204310:CDS |
| TCGAAGATTAGTAAGATAGA+CGG | 0.641292 | 8_1:-59890301 | Msa1204310:CDS |
| GACAGATAGTGAAATCACAC+TGG | 0.646133 | 8_1:-59890227 | Msa1204310:CDS |
| GGTTCTGCTAACATCCGCAA+AGG | 0.648279 | 8_1:-59889962 | Msa1204310:intron |
| TGTTAGCAGAACCATGAGCA+GGG | 0.651531 | 8_1:+59889972 | None:intergenic |
| GAGGTCCTGGATGCAATATG+AGG | 0.652896 | 8_1:-59889057 | Msa1204310:CDS |
| TTGAGCGCCGAATGGCTCTG+AGG | 0.661301 | 8_1:-59889079 | Msa1204310:CDS |
| GCTTTGCCCGAAATAGCTCA+AGG | 0.661971 | 8_1:-59890385 | Msa1204310:CDS |
| ATAGGGATAAGGACAGCAAG+TGG | 0.679605 | 8_1:-59888308 | Msa1204310:CDS |
| TTCTGACCCAACCCACAATG+TGG | 0.693365 | 8_1:+59889428 | None:intergenic |
| TGTTGATGTTGAGAACCTGA+AGG | 0.697040 | 8_1:-59889165 | Msa1204310:CDS |
| CCTGTGACATGTATCAAATG+TGG | 0.710894 | 8_1:+59890505 | None:intergenic |
| CAAGTGGTACATCAGTGACG+AGG | 0.722140 | 8_1:-59888292 | Msa1204310:intron |
| AATCTACGACCAAACCACAA+GGG | 0.735183 | 8_1:+59890200 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATAATTTAAGAAAATAGA+AGG | - | chr8_1:59887809-59887828 | Msa1204310:intron | 10.0% |
| !! | AATAATTTAAGAAAATAGAA+GGG | - | chr8_1:59887810-59887829 | Msa1204310:intron | 10.0% |
| !! | TAAAAATTAAATAATTGGAA+TGG | - | chr8_1:59889404-59889423 | Msa1204310:CDS | 10.0% |
| !!! | TTATTTTCTATCTATTTTTC+TGG | - | chr8_1:59887329-59887348 | Msa1204310:CDS | 15.0% |
| !!! | CATATTACATTTTCAATATT+TGG | - | chr8_1:59887379-59887398 | Msa1204310:intron | 15.0% |
| !!! | TTTTCTTTAATAGAATCATT+TGG | + | chr8_1:59888137-59888156 | None:intergenic | 15.0% |
| !! | ACTGCTAAAAATTAAATAAT+TGG | - | chr8_1:59889399-59889418 | Msa1204310:CDS | 15.0% |
| !!! | ATTTTTTTAGCACAATAAAA+TGG | - | chr8_1:59889804-59889823 | Msa1204310:intron | 15.0% |
| !! | AAACTATAATAATCAACAAA+AGG | + | chr8_1:59890069-59890088 | None:intergenic | 15.0% |
| !!! | TCATTATCTTATGTTATTTT+AGG | - | chr8_1:59890561-59890580 | Msa1204310:CDS | 15.0% |
| !! | TTAATGTCATCTTAAAATTT+GGG | + | chr8_1:59890939-59890958 | None:intergenic | 15.0% |
| !! | TTTAATGTCATCTTAAAATT+TGG | + | chr8_1:59890940-59890959 | None:intergenic | 15.0% |
| !! | TTTACTCAAACATTTGAATT+AGG | - | chr8_1:59887140-59887159 | Msa1204310:three_prime_UTR | 20.0% |
| !! | TTATTGAATCTTAATTGACA+TGG | + | chr8_1:59887284-59887303 | None:intergenic | 20.0% |
| !!! | ATTACATTTTCAATATTTGG+AGG | - | chr8_1:59887382-59887401 | Msa1204310:intron | 20.0% |
| !!! | ATAATGCCTTATTATGATAT+AGG | - | chr8_1:59887558-59887577 | Msa1204310:intron | 20.0% |
| !! | AATGAATAAAAAAGTCATCT+AGG | + | chr8_1:59887909-59887928 | None:intergenic | 20.0% |
| !! | AAACGGTTATATTTATTTCA+GGG | - | chr8_1:59887963-59887982 | Msa1204310:intron | 20.0% |
| !! | ACATTATAATGCAAGATAAT+TGG | + | chr8_1:59888647-59888666 | None:intergenic | 20.0% |
| !!! | CATGTATTTTGAACAATATA+CGG | + | chr8_1:59888701-59888720 | None:intergenic | 20.0% |
| !!! | AAAAATCACATATTTCTAGT+TGG | + | chr8_1:59888911-59888930 | None:intergenic | 20.0% |
| !! | TCGACAAAAATATAAAATGT+TGG | + | chr8_1:59889435-59889454 | None:intergenic | 20.0% |
| !! | ATAGAGTTAATCTTGAATTA+TGG | - | chr8_1:59890007-59890026 | Msa1204310:CDS | 20.0% |
| !!! | TTTTCATGATGTATTTAGAA+GGG | + | chr8_1:59890296-59890315 | None:intergenic | 20.0% |
| !! | GAAAAATAAAAATTTATGGG+AGG | + | chr8_1:59890535-59890554 | None:intergenic | 20.0% |
| !!! | ATCTTATGTTATTTTAGGAA+TGG | - | chr8_1:59890566-59890585 | Msa1204310:CDS | 20.0% |
| !! | TTATAACAAAACTTCATGAT+GGG | + | chr8_1:59890714-59890733 | None:intergenic | 20.0% |
| !! | ATTATAACAAAACTTCATGA+TGG | + | chr8_1:59890715-59890734 | None:intergenic | 20.0% |
| !!! | GAAGTTTTGTTATAATCTTT+CGG | - | chr8_1:59890719-59890738 | Msa1204310:CDS | 20.0% |
| !! | TATTTCAAGGATATATCTTA+AGG | - | chr8_1:59890743-59890762 | Msa1204310:exon | 20.0% |
| !! | ATTTCAAGGATATATCTTAA+GGG | - | chr8_1:59890744-59890763 | Msa1204310:exon | 20.0% |
| !! | TCTGAAAATGAACTTATAAA+TGG | - | chr8_1:59891077-59891096 | Msa1204310:intron | 20.0% |
| !! | CTGAAAATGAACTTATAAAT+GGG | - | chr8_1:59891078-59891097 | Msa1204310:intron | 20.0% |
| !! | TGAAAATGAACTTATAAATG+GGG | - | chr8_1:59891079-59891098 | Msa1204310:intron | 20.0% |
| !! | ATTTGATTCCTCTTAAAATT+TGG | + | chr8_1:59891150-59891169 | None:intergenic | 20.0% |
| !!! | TTAATATCACAAATTTTCCT+GGG | - | chr8_1:59891175-59891194 | Msa1204310:intron | 20.0% |
| !! | TAAAAGAATTGGAACTTAAA+TGG | - | chr8_1:59891210-59891229 | Msa1204310:intron | 20.0% |
| !! | AAATAAAATTCAGCAGTTAA+TGG | + | chr8_1:59891340-59891359 | None:intergenic | 20.0% |
| !! | ATTTTCAATATTTGGAGGTT+GGG | - | chr8_1:59887387-59887406 | Msa1204310:intron | 25.0% |
| !! | AAAAGTATGTGAAGTAGAAT+AGG | - | chr8_1:59887526-59887545 | Msa1204310:intron | 25.0% |
| ! | TTGCAAAATGCAACAAATAA+TGG | + | chr8_1:59887629-59887648 | None:intergenic | 25.0% |
| !!! | ATTTGTTGCATTTTGCAAAA+AGG | - | chr8_1:59887631-59887650 | Msa1204310:intron | 25.0% |
| !! | TTGCAAAAAGGCATAAAATT+AGG | - | chr8_1:59887643-59887662 | Msa1204310:intron | 25.0% |
| ! | ATTTAACATGATCTAATGTG+TGG | + | chr8_1:59887691-59887710 | None:intergenic | 25.0% |
| ! | GAAACGGTTATATTTATTTC+AGG | - | chr8_1:59887962-59887981 | Msa1204310:intron | 25.0% |
| ! | GTTTATTGAAAATGAAGAAG+TGG | - | chr8_1:59887985-59888004 | Msa1204310:intron | 25.0% |
| ! | TCTTTAATAGAATCATTTGG+TGG | + | chr8_1:59888134-59888153 | None:intergenic | 25.0% |
| ! | TTATAATGCAAGATAATTGG+AGG | + | chr8_1:59888644-59888663 | None:intergenic | 25.0% |
| ! | CGTATATTGTTCAAAATACA+TGG | - | chr8_1:59888699-59888718 | Msa1204310:CDS | 25.0% |
| !!! | ATGCAATTATAATGGACAAA+AGG | - | chr8_1:59888880-59888899 | Msa1204310:intron | 25.0% |
| !! | AATATGTGATTTTTATGTCG+AGG | - | chr8_1:59888917-59888936 | Msa1204310:intron | 25.0% |
| !! | ATGAAACATCTTTTGCATAT+AGG | - | chr8_1:59889352-59889371 | Msa1204310:intron | 25.0% |
| !! | TGAAACATCTTTTGCATATA+GGG | - | chr8_1:59889353-59889372 | Msa1204310:intron | 25.0% |
| ! | TTGCTATAATATTGAATGCA+TGG | + | chr8_1:59889905-59889924 | None:intergenic | 25.0% |
| ! | ACAAGAGAGGAATAATTTAA+AGG | + | chr8_1:59889937-59889956 | None:intergenic | 25.0% |
| ! | AGTTAATCTTGAATTATGGA+CGG | - | chr8_1:59890011-59890030 | Msa1204310:CDS | 25.0% |
| !!! | AATCAACAAAAGGCATTAAT+TGG | + | chr8_1:59890059-59890078 | None:intergenic | 25.0% |
| !! | ACAATTGCAATTTGCATTTT+GGG | - | chr8_1:59890102-59890121 | Msa1204310:CDS | 25.0% |
| !! | GTTTATTTGTTAGTTAATGC+TGG | - | chr8_1:59890173-59890192 | Msa1204310:CDS | 25.0% |
| !!! | AAGCAGTGATTTTTATTTAG+TGG | - | chr8_1:59890201-59890220 | Msa1204310:CDS | 25.0% |
| !! | GTTTTCATGATGTATTTAGA+AGG | + | chr8_1:59890297-59890316 | None:intergenic | 25.0% |
| ! | ATAATCTTTCGGATATTTCA+AGG | - | chr8_1:59890730-59890749 | Msa1204310:CDS | 25.0% |
| ! | ATTAAGAGTCTCAAATTGAT+TGG | - | chr8_1:59891045-59891064 | Msa1204310:intron | 25.0% |
| ! | GAAAATGAACTTATAAATGG+GGG | - | chr8_1:59891080-59891099 | Msa1204310:intron | 25.0% |
| ! | ATTCCTCTTAAAATTTGGAT+CGG | + | chr8_1:59891145-59891164 | None:intergenic | 25.0% |
| !! | CTTAATATCACAAATTTTCC+TGG | - | chr8_1:59891174-59891193 | Msa1204310:intron | 25.0% |
| ! | ACCACTTATGTTAAAAGAAT+TGG | - | chr8_1:59891199-59891218 | Msa1204310:intron | 25.0% |
| !! | TCCAATTCTTTTAACATAAG+TGG | + | chr8_1:59891203-59891222 | None:intergenic | 25.0% |
| ! | CTTAAATATGTATTCGCAAA+AGG | - | chr8_1:59891251-59891270 | Msa1204310:intron | 25.0% |
| ! | ATAGAAGAAAAATGCAATGA+TGG | + | chr8_1:59891285-59891304 | None:intergenic | 25.0% |
| !! | TAATAACTCTGTTGATTATG+AGG | - | chr8_1:59891607-59891626 | Msa1204310:five_prime_UTR | 25.0% |
| CTCTTTCAAATTCACATATG+CGG | - | chr8_1:59887103-59887122 | Msa1204310:three_prime_UTR | 30.0% | |
| ! | CATTTTCAATATTTGGAGGT+TGG | - | chr8_1:59887386-59887405 | Msa1204310:intron | 30.0% |
| ATCCTAGATTCAATCAAACT+CGG | - | chr8_1:59887449-59887468 | Msa1204310:intron | 30.0% | |
| AGGTTTGAATATCCTAGAAA+TGG | - | chr8_1:59887594-59887613 | Msa1204310:intron | 30.0% | |
| CAAAATGCAACAAATAATGG+AGG | + | chr8_1:59887626-59887645 | None:intergenic | 30.0% | |
| AAATTCTTTGTCTGCAGAAA+CGG | - | chr8_1:59887946-59887965 | Msa1204310:intron | 30.0% | |
| TTGAAAATGAAGAAGTGGTA+TGG | - | chr8_1:59887990-59888009 | Msa1204310:intron | 30.0% | |
| TACCTAAAGCCATGATAAAA+AGG | + | chr8_1:59888019-59888038 | None:intergenic | 30.0% | |
| TTTCTACTGTACAGTCTTAA+AGG | - | chr8_1:59888047-59888066 | Msa1204310:intron | 30.0% | |
| CAATGAATGTTGTACTTGTT+TGG | - | chr8_1:59888288-59888307 | Msa1204310:intron | 30.0% | |
| TTTAACTCCTTGAGCTATTT+CGG | + | chr8_1:59888354-59888373 | None:intergenic | 30.0% | |
| TCGAAGATTAGTAAGATAGA+CGG | - | chr8_1:59888428-59888447 | Msa1204310:CDS | 30.0% | |
| !!! | ATGGACAGTTTTGATTTTCT+GGG | + | chr8_1:59888454-59888473 | None:intergenic | 30.0% |
| !!! | AATGGACAGTTTTGATTTTC+TGG | + | chr8_1:59888455-59888474 | None:intergenic | 30.0% |
| GATTCTTCTATTACACTGAT+CGG | - | chr8_1:59888548-59888567 | Msa1204310:intron | 30.0% | |
| !!! | AATACATGGACTAGTGATTT+TGG | - | chr8_1:59888713-59888732 | Msa1204310:CDS | 30.0% |
| !!! | ATACATGGACTAGTGATTTT+GGG | - | chr8_1:59888714-59888733 | Msa1204310:CDS | 30.0% |
| TCATGCTAAATATACCTTTG+CGG | + | chr8_1:59888784-59888803 | None:intergenic | 30.0% | |
| TCGTTTGCATGCAATTATAA+TGG | - | chr8_1:59888872-59888891 | Msa1204310:intron | 30.0% | |
| TTTATAATTCGAACCTAGCT+TGG | - | chr8_1:59888955-59888974 | Msa1204310:intron | 30.0% | |
| AACAAAACATAATCCAAGCT+AGG | + | chr8_1:59888971-59888990 | None:intergenic | 30.0% | |
| AAACTGCACTCAAGAATAAA+AGG | + | chr8_1:59889067-59889086 | None:intergenic | 30.0% | |
| !!! | TTGAGTGCAGTTTTTTATGA+GGG | - | chr8_1:59889074-59889093 | Msa1204310:CDS | 30.0% |
| ! | CTTTCTGAGGAAATATTAGA+AGG | + | chr8_1:59889231-59889250 | None:intergenic | 30.0% |
| GGATTTCATATGACTGTAAA+TGG | - | chr8_1:59889324-59889343 | Msa1204310:intron | 30.0% | |
| TTCATATGACTGTAAATGGA+AGG | - | chr8_1:59889328-59889347 | Msa1204310:intron | 30.0% | |
| TTTAAGTCTGTTATCAGTTC+TGG | - | chr8_1:59889504-59889523 | Msa1204310:CDS | 30.0% | |
| ATATCATTATCTTCCGTAAC+AGG | + | chr8_1:59889541-59889560 | None:intergenic | 30.0% | |
| ! | ACAAAACAAGCCTTTTTCTA+GGG | + | chr8_1:59889600-59889619 | None:intergenic | 30.0% |
| ! | AACAAAACAAGCCTTTTTCT+AGG | + | chr8_1:59889601-59889620 | None:intergenic | 30.0% |
| !!! | AAAAGGCTTGTTTTGTTGAT+CGG | - | chr8_1:59889604-59889623 | Msa1204310:intron | 30.0% |
| TAGCACAATAAAATGGCAAT+AGG | - | chr8_1:59889811-59889830 | Msa1204310:intron | 30.0% | |
| ! | AGAACAGTTTTTAACAAGAG+AGG | + | chr8_1:59889950-59889969 | None:intergenic | 30.0% |
| ! | GACAATTGCAATTTGCATTT+TGG | - | chr8_1:59890101-59890120 | Msa1204310:CDS | 30.0% |
| ! | CAATTGCAATTTGCATTTTG+GGG | - | chr8_1:59890103-59890122 | Msa1204310:CDS | 30.0% |
| ! | AATTGCAATTTGCATTTTGG+GGG | - | chr8_1:59890104-59890123 | Msa1204310:CDS | 30.0% |
| ATAGCAAAATTCGTTGTCTT+TGG | - | chr8_1:59890646-59890665 | Msa1204310:CDS | 30.0% | |
| !! | TTACTTTGAGTTTTCTTTCC+TGG | + | chr8_1:59890675-59890694 | None:intergenic | 30.0% |
| CAACAATCAAGTAAAGTATG+CGG | + | chr8_1:59890800-59890819 | None:intergenic | 30.0% | |
| GCATACTTTACTTGATTGTT+GGG | - | chr8_1:59890799-59890818 | Msa1204310:intron | 30.0% | |
| CACAAAATGAGTTCATAAGT+GGG | - | chr8_1:59890863-59890882 | Msa1204310:intron | 30.0% | |
| ACAAAATGAGTTCATAAGTG+GGG | - | chr8_1:59890864-59890883 | Msa1204310:intron | 30.0% | |
| TAACTCAACCATTACAAATC+TGG | + | chr8_1:59890909-59890928 | None:intergenic | 30.0% | |
| AGATTTGTAATGGTTGAGTT+AGG | - | chr8_1:59890908-59890927 | Msa1204310:intron | 30.0% | |
| ! | GTCATCTTAAAATTTGGGTT+GGG | + | chr8_1:59890934-59890953 | None:intergenic | 30.0% |
| TGTCATCTTAAAATTTGGGT+TGG | + | chr8_1:59890935-59890954 | None:intergenic | 30.0% | |
| AAAACCTAACAAAAACCCAT+TGG | - | chr8_1:59890957-59890976 | Msa1204310:intron | 30.0% | |
| AAACCTAACAAAAACCCATT+GGG | - | chr8_1:59890958-59890977 | Msa1204310:intron | 30.0% | |
| TTCCTCTTAAAATTTGGATC+GGG | + | chr8_1:59891144-59891163 | None:intergenic | 30.0% | |
| ! | CTTCTATTCATCTTGCTATA+TGG | - | chr8_1:59891298-59891317 | Msa1204310:intron | 30.0% |
| AAAATTCAGCAGTTAATGGA+AGG | + | chr8_1:59891336-59891355 | None:intergenic | 30.0% | |
| TAAATTAGAAGATGTTGCCA+TGG | - | chr8_1:59891381-59891400 | Msa1204310:intron | 30.0% | |
| AAATTAGAAGATGTTGCCAT+GGG | - | chr8_1:59891382-59891401 | Msa1204310:intron | 30.0% | |
| ! | GCATATGGATTGAACAATTT+AGG | - | chr8_1:59891404-59891423 | Msa1204310:intron | 30.0% |
| TGGATTGAACAATTTAGGAA+TGG | - | chr8_1:59891409-59891428 | Msa1204310:intron | 30.0% | |
| ATTGAACAATTTAGGAATGG+TGG | - | chr8_1:59891412-59891431 | Msa1204310:intron | 30.0% | |
| TTCATTATGAGAATGATGAG+AGG | - | chr8_1:59891443-59891462 | Msa1204310:intron | 30.0% | |
| GTTTATTCAGCACAACATCA+AGG | - | chr8_1:59887162-59887181 | Msa1204310:exon | 35.0% | |
| !! | AGCTCAACTGATTTGAGTTA+AGG | - | chr8_1:59887411-59887430 | Msa1204310:intron | 35.0% |
| GGGACTCCTATATCATAATA+AGG | + | chr8_1:59887567-59887586 | None:intergenic | 35.0% | |
| AGGATATTCAAACCTCACAA+CGG | + | chr8_1:59887589-59887608 | None:intergenic | 35.0% | |
| ! | ATGCAACAAATAATGGAGGA+AGG | + | chr8_1:59887622-59887641 | None:intergenic | 35.0% |
| GTAACAACATGTGTTAGTGT+TGG | - | chr8_1:59887840-59887859 | Msa1204310:intron | 35.0% | |
| AAAATGAAGAAGTGGTATGG+AGG | - | chr8_1:59887993-59888012 | Msa1204310:intron | 35.0% | |
| !! | TAGAATCATTTGGTGGTGAA+TGG | + | chr8_1:59888127-59888146 | None:intergenic | 35.0% |
| TTTCGATGCAGATCAGAAAA+TGG | - | chr8_1:59888181-59888200 | Msa1204310:intron | 35.0% | |
| CACATTTGATACATGTCACA+GGG | - | chr8_1:59888225-59888244 | Msa1204310:intron | 35.0% | |
| ! | TTAACTCCTTGAGCTATTTC+GGG | + | chr8_1:59888353-59888372 | None:intergenic | 35.0% |
| AATAGCTCAAGGAGTTAAAG+AGG | - | chr8_1:59888355-59888374 | Msa1204310:CDS | 35.0% | |
| GTCTATCTTACTAATCTTCG+AGG | + | chr8_1:59888429-59888448 | None:intergenic | 35.0% | |
| ! | AGCTACTGTTTTGTCCATTA+GGG | + | chr8_1:59888577-59888596 | None:intergenic | 35.0% |
| ! | AAGCTACTGTTTTGTCCATT+AGG | + | chr8_1:59888578-59888597 | None:intergenic | 35.0% |
| TGCAAGATAATTGGAGGATT+TGG | + | chr8_1:59888638-59888657 | None:intergenic | 35.0% | |
| CATTATAATGTGAGTCTTCC+TGG | - | chr8_1:59888656-59888675 | Msa1204310:CDS | 35.0% | |
| TACCATCTTCATTCCTTAGT+AGG | - | chr8_1:59888995-59889014 | Msa1204310:intron | 35.0% | |
| !!! | CTTGAGTGCAGTTTTTTATG+AGG | - | chr8_1:59889073-59889092 | Msa1204310:CDS | 35.0% |
| ! | TTTATGAGGGAAGCTTTTAG+TGG | - | chr8_1:59889087-59889106 | Msa1204310:CDS | 35.0% |
| CATCAACTACATCATAGAGT+TGG | + | chr8_1:59889128-59889147 | None:intergenic | 35.0% | |
| ! | TGCTAATTTCCCTTTTTCTG+AGG | - | chr8_1:59889263-59889282 | Msa1204310:CDS | 35.0% |
| !! | AAGGATTAGCCTCAGAAAAA+GGG | + | chr8_1:59889275-59889294 | None:intergenic | 35.0% |
| !! | AAAGGATTAGCCTCAGAAAA+AGG | + | chr8_1:59889276-59889295 | None:intergenic | 35.0% |
| ! | AACATCTTTTGCATATAGGG+AGG | - | chr8_1:59889356-59889375 | Msa1204310:intron | 35.0% |
| ! | CATATAGGGAGGTATGATAT+AGG | - | chr8_1:59889367-59889386 | Msa1204310:intron | 35.0% |
| ! | GTTGCTGTCAGATTTTTCAT+TGG | - | chr8_1:59889712-59889731 | Msa1204310:intron | 35.0% |
| ! | CAGATGATGATGCTTTCATA+AGG | - | chr8_1:59890316-59890335 | Msa1204310:CDS | 35.0% |
| AAGATATTAGACCGTACAAG+AGG | + | chr8_1:59890386-59890405 | None:intergenic | 35.0% | |
| TTCTAAGTCATCTCCTGATA+GGG | - | chr8_1:59890404-59890423 | Msa1204310:CDS | 35.0% | |
| ! | ACAAAACTTCATGATGGGAA+AGG | + | chr8_1:59890709-59890728 | None:intergenic | 35.0% |
| !! | CTCGTATTAGAAGTGTCAAA+AGG | - | chr8_1:59890771-59890790 | Msa1204310:intron | 35.0% |
| CGCATACTTTACTTGATTGT+TGG | - | chr8_1:59890798-59890817 | Msa1204310:intron | 35.0% | |
| TTTACTTGATTGTTGGGACT+GGG | - | chr8_1:59890805-59890824 | Msa1204310:intron | 35.0% | |
| GGACTTATCTCATCAAATGT+GGG | + | chr8_1:59890844-59890863 | None:intergenic | 35.0% | |
| TGGACTTATCTCATCAAATG+TGG | + | chr8_1:59890845-59890864 | None:intergenic | 35.0% | |
| ! | CCACTTATGAACTCATTTTG+TGG | + | chr8_1:59890865-59890884 | None:intergenic | 35.0% |
| CCACAAAATGAGTTCATAAG+TGG | - | chr8_1:59890862-59890881 | Msa1204310:intron | 35.0% | |
| CAAAATGAGTTCATAAGTGG+GGG | - | chr8_1:59890865-59890884 | Msa1204310:intron | 35.0% | |
| ! | CATTACAAATCTGGCTTGTA+AGG | + | chr8_1:59890900-59890919 | None:intergenic | 35.0% |
| CTTACAAGCCAGATTTGTAA+TGG | - | chr8_1:59890898-59890917 | Msa1204310:intron | 35.0% | |
| CTCAAATTGATTGGATGAGA+AGG | - | chr8_1:59891054-59891073 | Msa1204310:intron | 35.0% | |
| TCAATCCTTACAAAACCGTA+AGG | + | chr8_1:59891115-59891134 | None:intergenic | 35.0% | |
| !! | GGTTTTGTAAGGATTGAGTT+AGG | - | chr8_1:59891118-59891137 | Msa1204310:intron | 35.0% |
| ! | TTTTAACATAAGTGGTTCCC+AGG | + | chr8_1:59891195-59891214 | None:intergenic | 35.0% |
| TTGCGCATTATCAAAATCCA+AGG | - | chr8_1:59891500-59891519 | Msa1204310:intron | 35.0% | |
| GCATTATCAAAATCCAAGGA+TGG | - | chr8_1:59891504-59891523 | Msa1204310:intron | 35.0% | |
| GATATCTACTCACAACATTC+TGG | + | chr8_1:59891568-59891587 | None:intergenic | 35.0% | |
| GAGCAGTACTTCAGAAACAA+AGG | + | chr8_1:59887079-59887098 | None:intergenic | 40.0% | |
| TGAGTTAAGGAATACGAAGC+TGG | - | chr8_1:59887424-59887443 | Msa1204310:intron | 40.0% | |
| GTCCGAGTTTGATTGAATCT+AGG | + | chr8_1:59887454-59887473 | None:intergenic | 40.0% | |
| GATATTCAAACCTCACAACG+GGG | + | chr8_1:59887587-59887606 | None:intergenic | 40.0% | |
| GGATATTCAAACCTCACAAC+GGG | + | chr8_1:59887588-59887607 | None:intergenic | 40.0% | |
| ! | CTTGAGATTGAAAGCGTGTT+CGG | + | chr8_1:59887869-59887888 | None:intergenic | 40.0% |
| ACGCTTTCAATCTCAAGTGT+CGG | - | chr8_1:59887872-59887891 | Msa1204310:intron | 40.0% | |
| ! | GTATGGAGGCCTTTTTATCA+TGG | - | chr8_1:59888007-59888026 | Msa1204310:intron | 40.0% |
| ! | GGCCTTTTTATCATGGCTTT+AGG | - | chr8_1:59888014-59888033 | Msa1204310:intron | 40.0% |
| !! | TGTTTTGCTGACTGCTTTTG+TGG | + | chr8_1:59888080-59888099 | None:intergenic | 40.0% |
| TTTCTGATCTGCATCGAAAG+AGG | + | chr8_1:59888180-59888199 | None:intergenic | 40.0% | |
| TGGCACCAAAACCAACAAAA+CGG | - | chr8_1:59888201-59888220 | Msa1204310:intron | 40.0% | |
| !! | ATCAAATGTGGCCGTTTTGT+TGG | + | chr8_1:59888215-59888234 | None:intergenic | 40.0% |
| CCTGTGACATGTATCAAATG+TGG | + | chr8_1:59888227-59888246 | None:intergenic | 40.0% | |
| CCACATTTGATACATGTCAC+AGG | - | chr8_1:59888224-59888243 | Msa1204310:intron | 40.0% | |
| ! | ATTTACGTTTGTTGCTGTCG+AGG | - | chr8_1:59888315-59888334 | Msa1204310:CDS | 40.0% |
| TTAAAGAGGCTTCTGTAGCT+TGG | - | chr8_1:59888369-59888388 | Msa1204310:CDS | 40.0% | |
| TGTCATTGTCTTGCCAAGTT+TGG | + | chr8_1:59888486-59888505 | None:intergenic | 40.0% | |
| GACAGATAGTGAAATCACAC+TGG | - | chr8_1:59888502-59888521 | Msa1204310:intron | 40.0% | |
| AATCTACGACCAAACCACAA+GGG | + | chr8_1:59888532-59888551 | None:intergenic | 40.0% | |
| ! | ATCTCTGTCATGTTTTCTCC+AGG | + | chr8_1:59888677-59888696 | None:intergenic | 40.0% |
| !!! | ATGGACTAGTGATTTTGGGT+GGG | - | chr8_1:59888718-59888737 | Msa1204310:CDS | 40.0% |
| AGCCTACTAAGGAATGAAGA+TGG | + | chr8_1:59889000-59889019 | None:intergenic | 40.0% | |
| GTAGTTACTACAGCCTACTA+AGG | + | chr8_1:59889011-59889030 | None:intergenic | 40.0% | |
| AACTACATTAGCAACACCTC+AGG | - | chr8_1:59889025-59889044 | Msa1204310:CDS | 40.0% | |
| AAGCAAGATAGCATAACCTG+AGG | + | chr8_1:59889044-59889063 | None:intergenic | 40.0% | |
| AGTTCTATGTGCACTTTCTG+AGG | + | chr8_1:59889244-59889263 | None:intergenic | 40.0% | |
| !! | TTAATCGTGCTGACTAACCA+TGG | + | chr8_1:59889472-59889491 | None:intergenic | 40.0% |
| ! | CTGTTATCAGTTCTGGCTAA+AGG | - | chr8_1:59889511-59889530 | Msa1204310:CDS | 40.0% |
| GGCTAAAGGTTTACCTGTTA+CGG | - | chr8_1:59889525-59889544 | Msa1204310:CDS | 40.0% | |
| TGTTGATGTTGAGAACCTGA+AGG | - | chr8_1:59889564-59889583 | Msa1204310:CDS | 40.0% | |
| ! | TTGATCGGAGTATTCTCTAC+CGG | - | chr8_1:59889619-59889638 | Msa1204310:intron | 40.0% |
| !! | AAATAACTTTGAGCGCCGAA+TGG | - | chr8_1:59889642-59889661 | Msa1204310:intron | 40.0% |
| GGGTTAAGACTGTTAGAGTA+TGG | + | chr8_1:59889857-59889876 | None:intergenic | 40.0% | |
| TTAGTCCACACTACAGCATT+TGG | + | chr8_1:59889881-59889900 | None:intergenic | 40.0% | |
| CTTCTAAGTCATCTCCTGAT+AGG | - | chr8_1:59890403-59890422 | Msa1204310:CDS | 40.0% | |
| !! | CTTTGAGTTTTCTTTCCTGG+TGG | + | chr8_1:59890672-59890691 | None:intergenic | 40.0% |
| ! | AAACTTCATGATGGGAAAGG+AGG | + | chr8_1:59890706-59890725 | None:intergenic | 40.0% |
| CTTTACTTGATTGTTGGGAC+TGG | - | chr8_1:59890804-59890823 | Msa1204310:intron | 40.0% | |
| CACTCACTATTGGAACACTT+GGG | - | chr8_1:59890982-59891001 | Msa1204310:intron | 40.0% | |
| !! | TCTCACCTTACGGTTTTGTA+AGG | - | chr8_1:59891107-59891126 | Msa1204310:intron | 40.0% |
| TTGTTCAATCCATATGCCCA+TGG | + | chr8_1:59891401-59891420 | None:intergenic | 40.0% | |
| ! | GATGAGAGGTTTTACAATGC+TGG | - | chr8_1:59891457-59891476 | Msa1204310:intron | 40.0% |
| !! | AAGGATGGTGTTATGCCTTT+GGG | - | chr8_1:59891519-59891538 | Msa1204310:intron | 40.0% |
| AGGTATGAGTGTTTCACACC+TGG | - | chr8_1:59887034-59887053 | Msa1204310:three_prime_UTR | 45.0% | |
| CGCTTTCAATCTCAAGTGTC+GGG | - | chr8_1:59887873-59887892 | Msa1204310:intron | 45.0% | |
| ! | GCTTTCAATCTCAAGTGTCG+GGG | - | chr8_1:59887874-59887893 | Msa1204310:intron | 45.0% |
| !!! | TGTGGCCGTTTTGTTGGTTT+TGG | + | chr8_1:59888209-59888228 | None:intergenic | 45.0% |
| CCAAGTTTGGTCACAGAGAA+TGG | + | chr8_1:59888473-59888492 | None:intergenic | 45.0% | |
| CCATTCTCTGTGACCAAACT+TGG | - | chr8_1:59888470-59888489 | Msa1204310:intron | 45.0% | |
| GAATCTACGACCAAACCACA+AGG | + | chr8_1:59888533-59888552 | None:intergenic | 45.0% | |
| AGCTTTCAGATTGAGCTAGC+TGG | - | chr8_1:59888593-59888612 | Msa1204310:intron | 45.0% | |
| !!! | CATGGACTAGTGATTTTGGG+TGG | - | chr8_1:59888717-59888736 | Msa1204310:CDS | 45.0% |
| !!! | TGGACTAGTGATTTTGGGTG+GGG | - | chr8_1:59888719-59888738 | Msa1204310:CDS | 45.0% |
| TGTTAGCAGAACCATGAGCA+GGG | + | chr8_1:59888760-59888779 | None:intergenic | 45.0% | |
| ATGTTAGCAGAACCATGAGC+AGG | + | chr8_1:59888761-59888780 | None:intergenic | 45.0% | |
| ATCCTTTCACTGCCACATTG+TGG | - | chr8_1:59889289-59889308 | Msa1204310:intron | 45.0% | |
| TCCTTTCACTGCCACATTGT+GGG | - | chr8_1:59889290-59889309 | Msa1204310:intron | 45.0% | |
| CGATGCAGAATCTTGAACCA+TGG | - | chr8_1:59889452-59889471 | Msa1204310:CDS | 45.0% | |
| GTCAGCACGATTAAAGTAGC+AGG | - | chr8_1:59889478-59889497 | Msa1204310:CDS | 45.0% | |
| CTCCAGCTATCCCTAGAAAA+AGG | - | chr8_1:59889587-59889606 | Msa1204310:CDS | 45.0% | |
| !! | AGCCTTTTTCTAGGGATAGC+TGG | + | chr8_1:59889592-59889611 | None:intergenic | 45.0% |
| ! | TCGGCGCTCAAAGTTATTTC+CGG | + | chr8_1:59889641-59889660 | None:intergenic | 45.0% |
| TACAGCCTCATATTGCATCC+AGG | + | chr8_1:59889680-59889699 | None:intergenic | 45.0% | |
| CAATATGAGGCTGTACGTTC+TGG | - | chr8_1:59889685-59889704 | Msa1204310:intron | 45.0% | |
| TCCACACTACAGCATTTGGT+GGG | + | chr8_1:59889877-59889896 | None:intergenic | 45.0% | |
| AAGTGCTTTCCAGCCTCAAA+GGG | - | chr8_1:59890346-59890365 | Msa1204310:CDS | 45.0% | |
| GTCATCTCCTGATAGGGATA+AGG | - | chr8_1:59890410-59890429 | Msa1204310:CDS | 45.0% | |
| TTGCTGTCCTTATCCCTATC+AGG | + | chr8_1:59890420-59890439 | None:intergenic | 45.0% | |
| ATAGGGATAAGGACAGCAAG+TGG | - | chr8_1:59890421-59890440 | Msa1204310:CDS | 45.0% | |
| ACATGATACGTACCCACCAT+GGG | - | chr8_1:59890591-59890610 | Msa1204310:CDS | 45.0% | |
| TCGCGAGATATGACATATCC+AGG | + | chr8_1:59890625-59890644 | None:intergenic | 45.0% | |
| CTCATCAAATGTGGGACTCT+TGG | + | chr8_1:59890836-59890855 | None:intergenic | 45.0% | |
| !! | TGGCCCAATGGGTTTTTGTT+AGG | + | chr8_1:59890964-59890983 | None:intergenic | 45.0% |
| CCAAGTGTTCCAATAGTGAG+TGG | + | chr8_1:59890984-59891003 | None:intergenic | 45.0% | |
| CCACTCACTATTGGAACACT+TGG | - | chr8_1:59890981-59891000 | Msa1204310:intron | 45.0% | |
| ACACTCCATATGTCCAGTCT+TGG | - | chr8_1:59891007-59891026 | Msa1204310:intron | 45.0% | |
| CACTCCATATGTCCAGTCTT+GGG | - | chr8_1:59891008-59891027 | Msa1204310:intron | 45.0% | |
| ATATGTCATACGCCCAAGAC+TGG | + | chr8_1:59891023-59891042 | None:intergenic | 45.0% | |
| ! | GGCCCGATCCAAATTTTAAG+AGG | - | chr8_1:59891139-59891158 | Msa1204310:intron | 45.0% |
| AAGATGTTGCCATGGGCATA+TGG | - | chr8_1:59891389-59891408 | Msa1204310:intron | 45.0% | |
| ! | CAAAGGCATAACACCATCCT+TGG | + | chr8_1:59891520-59891539 | None:intergenic | 45.0% |
| !! | CAAGGATGGTGTTATGCCTT+TGG | - | chr8_1:59891518-59891537 | Msa1204310:intron | 45.0% |
| CTTTCTGCAGTTTCTCCCAA+AGG | + | chr8_1:59891537-59891556 | None:intergenic | 45.0% | |
| !! | TAAAAAATAAATAACAAATA+AGG | + | chr8_1:59890255-59890274 | None:intergenic | 5.0% |
| !! | ATAGAAAAATAAAAATTTAT+GGG | + | chr8_1:59890538-59890557 | None:intergenic | 5.0% |
| !! | AATAGAAAAATAAAAATTTA+TGG | + | chr8_1:59890539-59890558 | None:intergenic | 5.0% |
| ATATAGGAGTCCCCGTTGTG+AGG | - | chr8_1:59887574-59887593 | Msa1204310:intron | 50.0% | |
| TGGAGGAAGGAGCCATTTCT+AGG | + | chr8_1:59887609-59887628 | None:intergenic | 50.0% | |
| GCTTTGCCCGAAATAGCTCA+AGG | - | chr8_1:59888344-59888363 | Msa1204310:CDS | 50.0% | |
| ATCACACTGGATCTCCCTTG+TGG | - | chr8_1:59888515-59888534 | Msa1204310:intron | 50.0% | |
| ACTGGATCTCCCTTGTGGTT+TGG | - | chr8_1:59888520-59888539 | Msa1204310:intron | 50.0% | |
| ACACTGATCGGCATCCCTAA+TGG | - | chr8_1:59888560-59888579 | Msa1204310:intron | 50.0% | |
| AGCTGGACAAGAGCTAGAAG+AGG | - | chr8_1:59888610-59888629 | Msa1204310:intron | 50.0% | |
| !! | GGACTAGTGATTTTGGGTGG+GGG | - | chr8_1:59888720-59888739 | Msa1204310:CDS | 50.0% |
| !! | TGATTTTGGGTGGGGGAAAG+AGG | - | chr8_1:59888727-59888746 | Msa1204310:CDS | 50.0% |
| GGTTCTGCTAACATCCGCAA+AGG | - | chr8_1:59888767-59888786 | Msa1204310:intron | 50.0% | |
| ACCCACAATGTGGCAGTGAA+AGG | + | chr8_1:59889294-59889313 | None:intergenic | 50.0% | |
| TTCACTGCCACATTGTGGGT+TGG | - | chr8_1:59889294-59889313 | Msa1204310:intron | 50.0% | |
| TCACTGCCACATTGTGGGTT+GGG | - | chr8_1:59889295-59889314 | Msa1204310:intron | 50.0% | |
| TTCTGACCCAACCCACAATG+TGG | + | chr8_1:59889304-59889323 | None:intergenic | 50.0% | |
| !! | ACATTGTGGGTTGGGTCAGA+AGG | - | chr8_1:59889303-59889322 | Msa1204310:intron | 50.0% |
| GAGGTCCTGGATGCAATATG+AGG | - | chr8_1:59889672-59889691 | Msa1204310:intron | 50.0% | |
| ACCCACCAAATGCTGTAGTG+TGG | - | chr8_1:59889873-59889892 | Msa1204310:intron | 50.0% | |
| GTCCACACTACAGCATTTGG+TGG | + | chr8_1:59889878-59889897 | None:intergenic | 50.0% | |
| TGGACGGAAGCTCAAGCATA+TGG | - | chr8_1:59890027-59890046 | Msa1204310:CDS | 50.0% | |
| ! | GAAGTGCTTTCCAGCCTCAA+AGG | - | chr8_1:59890345-59890364 | Msa1204310:CDS | 50.0% |
| CTTCAGATGGCTTCCCTTTG+AGG | + | chr8_1:59890362-59890381 | None:intergenic | 50.0% | |
| CTCAAAGGGAAGCCATCTGA+AGG | - | chr8_1:59890360-59890379 | Msa1204310:CDS | 50.0% | |
| CCATCTGAAGGCCTCTTGTA+CGG | - | chr8_1:59890372-59890391 | Msa1204310:CDS | 50.0% | |
| CAAGTGGTACATCAGTGACG+AGG | - | chr8_1:59890437-59890456 | Msa1204310:CDS | 50.0% | |
| ACACACACACACACACACAC+AGG | + | chr8_1:59890469-59890488 | None:intergenic | 50.0% | |
| CACATGATACGTACCCACCA+TGG | - | chr8_1:59890590-59890609 | Msa1204310:CDS | 50.0% | |
| ATTCGTTGTCTTTGGCCACC+AGG | - | chr8_1:59890654-59890673 | Msa1204310:CDS | 50.0% | |
| CCAATAGTGAGTGGCCCAAT+GGG | + | chr8_1:59890975-59890994 | None:intergenic | 50.0% | |
| TCCAATAGTGAGTGGCCCAA+TGG | + | chr8_1:59890976-59890995 | None:intergenic | 50.0% | |
| TACGCCCAAGACTGGACATA+TGG | + | chr8_1:59891015-59891034 | None:intergenic | 50.0% | |
| GAGTGTTTCACACCTGGAGC+TGG | - | chr8_1:59887040-59887059 | Msa1204310:three_prime_UTR | 55.0% | |
| GAGGAAAGATGCCCTGCTCA+TGG | - | chr8_1:59888746-59888765 | Msa1204310:intron | 55.0% | |
| TAGGGATAGCTGGAGCCTTC+AGG | + | chr8_1:59889582-59889601 | None:intergenic | 55.0% | |
| AGGACCTCCTCAGAGCCATT+CGG | + | chr8_1:59889660-59889679 | None:intergenic | 55.0% | |
| !! | AGATGGCTTCCCTTTGAGGC+TGG | + | chr8_1:59890358-59890377 | None:intergenic | 55.0% |
| CCGTACAAGAGGCCTTCAGA+TGG | + | chr8_1:59890375-59890394 | None:intergenic | 55.0% | |
| TATCCAGGACCATGTGCCCA+TGG | + | chr8_1:59890610-59890629 | None:intergenic | 55.0% | |
| CCCATTGGGCCACTCACTAT+TGG | - | chr8_1:59890972-59890991 | Msa1204310:intron | 55.0% | |
| TGGGGGCAGTTCTCACCTTA+CGG | - | chr8_1:59891097-59891116 | Msa1204310:intron | 55.0% | |
| TTCACACCTGGAGCTGGAGC+TGG | - | chr8_1:59887046-59887065 | Msa1204310:three_prime_UTR | 60.0% | |
| AACTCACCAGCTCCAGCTCC+AGG | + | chr8_1:59887055-59887074 | None:intergenic | 60.0% | |
| !! | TTGAGCGCCGAATGGCTCTG+AGG | - | chr8_1:59889650-59889669 | Msa1204310:intron | 60.0% |
| !! | GAATGGCTCTGAGGAGGTCC+TGG | - | chr8_1:59889659-59889678 | Msa1204310:intron | 60.0% |
| ACGTACCCACCATGGGCACA+TGG | - | chr8_1:59890598-59890617 | Msa1204310:CDS | 60.0% | |
| CAGGACCATGTGCCCATGGT+GGG | + | chr8_1:59890606-59890625 | None:intergenic | 60.0% | |
| !! | AGCGCCGAATGGCTCTGAGG+AGG | - | chr8_1:59889653-59889672 | Msa1204310:intron | 65.0% |
| CCAGGACCATGTGCCCATGG+TGG | + | chr8_1:59890607-59890626 | None:intergenic | 65.0% | |
| CCACCATGGGCACATGGTCC+TGG | - | chr8_1:59890604-59890623 | Msa1204310:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 59887029 | 59891722 | 59887029 | ID=Msa1204310;Name=Msa1204310 |
| chr8_1 | mRNA | 59887029 | 59891722 | 59887029 | ID=Msa1204310-mRNA-1;Parent=Msa1204310;Name=Msa1204310-mRNA-1;_AED=0.17;_eAED=0.17;_QI=188|1|1|1|0.85|0.75|8|140|642 |
| chr8_1 | exon | 59887029 | 59887375 | 59887029 | ID=Msa1204310-mRNA-1:exon:19454;Parent=Msa1204310-mRNA-1 |
| chr8_1 | exon | 59888061 | 59888168 | 59888061 | ID=Msa1204310-mRNA-1:exon:19453;Parent=Msa1204310-mRNA-1 |
| chr8_1 | exon | 59888293 | 59888469 | 59888293 | ID=Msa1204310-mRNA-1:exon:19452;Parent=Msa1204310-mRNA-1 |
| chr8_1 | exon | 59888626 | 59888754 | 59888626 | ID=Msa1204310-mRNA-1:exon:19451;Parent=Msa1204310-mRNA-1 |
| chr8_1 | exon | 59889013 | 59889291 | 59889013 | ID=Msa1204310-mRNA-1:exon:19450;Parent=Msa1204310-mRNA-1 |
| chr8_1 | exon | 59889374 | 59889609 | 59889374 | ID=Msa1204310-mRNA-1:exon:19449;Parent=Msa1204310-mRNA-1 |
| chr8_1 | exon | 59889963 | 59890788 | 59889963 | ID=Msa1204310-mRNA-1:exon:19448;Parent=Msa1204310-mRNA-1 |
| chr8_1 | exon | 59891568 | 59891722 | 59891568 | ID=Msa1204310-mRNA-1:exon:19447;Parent=Msa1204310-mRNA-1 |
| chr8_1 | five_prime_UTR | 59891568 | 59891722 | 59891568 | ID=Msa1204310-mRNA-1:five_prime_utr;Parent=Msa1204310-mRNA-1 |
| chr8_1 | five_prime_UTR | 59890756 | 59890788 | 59890756 | ID=Msa1204310-mRNA-1:five_prime_utr;Parent=Msa1204310-mRNA-1 |
| chr8_1 | CDS | 59889963 | 59890755 | 59889963 | ID=Msa1204310-mRNA-1:cds;Parent=Msa1204310-mRNA-1 |
| chr8_1 | CDS | 59889374 | 59889609 | 59889374 | ID=Msa1204310-mRNA-1:cds;Parent=Msa1204310-mRNA-1 |
| chr8_1 | CDS | 59889013 | 59889291 | 59889013 | ID=Msa1204310-mRNA-1:cds;Parent=Msa1204310-mRNA-1 |
| chr8_1 | CDS | 59888626 | 59888754 | 59888626 | ID=Msa1204310-mRNA-1:cds;Parent=Msa1204310-mRNA-1 |
| chr8_1 | CDS | 59888293 | 59888469 | 59888293 | ID=Msa1204310-mRNA-1:cds;Parent=Msa1204310-mRNA-1 |
| chr8_1 | CDS | 59888061 | 59888168 | 59888061 | ID=Msa1204310-mRNA-1:cds;Parent=Msa1204310-mRNA-1 |
| chr8_1 | CDS | 59887169 | 59887375 | 59887169 | ID=Msa1204310-mRNA-1:cds;Parent=Msa1204310-mRNA-1 |
| chr8_1 | three_prime_UTR | 59887029 | 59887168 | 59887029 | ID=Msa1204310-mRNA-1:three_prime_utr;Parent=Msa1204310-mRNA-1 |
| Gene Sequence |
| Protein sequence |
