Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1208570 | XP_013457705.1 | 96.944 | 360 | 11 | 0 | 1 | 360 | 1 | 360 | 0.0 | 737 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1208570 | sp|P25803|CYSEP_PHAVU | 78.729 | 362 | 75 | 2 | 1 | 360 | 1 | 362 | 0.0 | 594 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1208570 | A0A072UQV2 | 96.944 | 360 | 11 | 0 | 1 | 360 | 1 | 360 | 0.0 | 737 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1208570 | Msa1258880 | 0.993166 | 6.842145e-198 | -8.615850e-47 |
| Msa1208570 | Msa1330160 | 0.944911 | 8.147133e-104 | -8.615850e-47 |
| Msa1208570 | Msa1330190 | 0.972403 | 1.042113e-134 | -8.615850e-47 |
| Msa1208570 | Msa1369790 | 0.949019 | 2.960864e-107 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1208570 | MtrunA17_Chr4g0058081 | 96.944 | 360 | 11 | 0 | 1 | 360 | 1 | 360 | 0.0 | 737 |
| Msa1208570 | MtrunA17_Chr3g0116551 | 74.033 | 362 | 92 | 2 | 1 | 360 | 1 | 362 | 0.0 | 576 |
| Msa1208570 | MtrunA17_Chr4g0041061 | 54.885 | 348 | 146 | 9 | 1 | 342 | 1 | 343 | 2.31e-127 | 369 |
| Msa1208570 | MtrunA17_Chr4g0060251 | 54.179 | 347 | 150 | 7 | 1 | 342 | 1 | 343 | 1.43e-126 | 367 |
| Msa1208570 | MtrunA17_Chr4g0040881 | 57.862 | 318 | 124 | 8 | 30 | 342 | 31 | 343 | 1.35e-125 | 364 |
| Msa1208570 | MtrunA17_Chr5g0405751 | 54.519 | 343 | 145 | 9 | 5 | 342 | 6 | 342 | 2.46e-125 | 363 |
| Msa1208570 | MtrunA17_Chr4g0024411 | 59.105 | 313 | 116 | 8 | 38 | 342 | 33 | 341 | 3.76e-125 | 363 |
| Msa1208570 | MtrunA17_Chr4g0041081 | 57.547 | 318 | 125 | 8 | 30 | 342 | 31 | 343 | 5.45e-125 | 363 |
| Msa1208570 | MtrunA17_Chr3g0144281 | 53.161 | 348 | 151 | 7 | 5 | 345 | 7 | 349 | 1.04e-121 | 355 |
| Msa1208570 | MtrunA17_Chr4g0041481 | 57.051 | 312 | 122 | 8 | 35 | 342 | 35 | 338 | 1.61e-121 | 354 |
| Msa1208570 | MtrunA17_Chr4g0041521 | 56.151 | 317 | 127 | 8 | 30 | 342 | 30 | 338 | 1.64e-121 | 354 |
| Msa1208570 | MtrunA17_Chr2g0315491 | 54.070 | 344 | 142 | 9 | 5 | 342 | 6 | 339 | 5.06e-118 | 345 |
| Msa1208570 | MtrunA17_Chr1g0208261 | 54.128 | 327 | 144 | 6 | 23 | 345 | 73 | 397 | 1.13e-116 | 348 |
| Msa1208570 | MtrunA17_Chr4g0053311 | 49.425 | 348 | 163 | 7 | 1 | 344 | 4 | 342 | 6.08e-115 | 338 |
| Msa1208570 | MtrunA17_Chr4g0040851 | 57.192 | 292 | 115 | 5 | 54 | 343 | 76 | 359 | 1.48e-114 | 337 |
| Msa1208570 | MtrunA17_Chr3g0134231 | 50.430 | 349 | 162 | 8 | 6 | 345 | 17 | 363 | 2.10e-112 | 335 |
| Msa1208570 | MtrunA17_Chr4g0041471 | 49.363 | 314 | 154 | 4 | 33 | 343 | 30 | 341 | 1.06e-107 | 319 |
| Msa1208570 | MtrunA17_Chr2g0325121 | 51.948 | 308 | 136 | 6 | 40 | 344 | 39 | 337 | 1.30e-106 | 316 |
| Msa1208570 | MtrunA17_Chr2g0319991 | 48.378 | 339 | 161 | 7 | 11 | 343 | 13 | 343 | 6.52e-106 | 314 |
| Msa1208570 | MtrunA17_Chr1g0153011 | 49.014 | 355 | 149 | 10 | 1 | 344 | 10 | 343 | 1.34e-104 | 315 |
| Msa1208570 | MtrunA17_Chr7g0248391 | 49.536 | 323 | 143 | 10 | 26 | 343 | 30 | 337 | 3.33e-100 | 300 |
| Msa1208570 | MtrunA17_Chr3g0142071 | 48.553 | 311 | 156 | 4 | 39 | 346 | 49 | 358 | 1.74e-94 | 289 |
| Msa1208570 | MtrunA17_Chr7g0248811 | 46.707 | 334 | 161 | 8 | 13 | 342 | 14 | 334 | 9.31e-94 | 283 |
| Msa1208570 | MtrunA17_Chr2g0283901 | 42.857 | 350 | 180 | 12 | 8 | 345 | 16 | 357 | 2.65e-83 | 261 |
| Msa1208570 | MtrunA17_Chr2g0283671 | 52.294 | 218 | 102 | 2 | 126 | 343 | 12 | 227 | 2.26e-74 | 229 |
| Msa1208570 | MtrunA17_Chr8g0379151 | 40.503 | 358 | 180 | 15 | 6 | 344 | 30 | 373 | 2.63e-69 | 222 |
| Msa1208570 | MtrunA17_Chr2g0311381 | 41.231 | 325 | 164 | 13 | 40 | 345 | 36 | 352 | 4.95e-69 | 220 |
| Msa1208570 | MtrunA17_Chr2g0311471 | 38.873 | 355 | 194 | 13 | 3 | 343 | 1 | 346 | 1.65e-67 | 216 |
| Msa1208570 | MtrunA17_Chr2g0283741 | 36.905 | 336 | 194 | 11 | 30 | 355 | 43 | 370 | 2.43e-65 | 211 |
| Msa1208570 | MtrunA17_Chr0c27g0493921 | 42.193 | 301 | 149 | 12 | 52 | 343 | 64 | 348 | 1.11e-63 | 206 |
| Msa1208570 | MtrunA17_Chr4g0070441 | 42.466 | 292 | 143 | 12 | 52 | 334 | 64 | 339 | 1.61e-60 | 198 |
| Msa1208570 | MtrunA17_Chr1g0155781 | 39.073 | 302 | 149 | 12 | 54 | 335 | 66 | 352 | 4.54e-59 | 195 |
| Msa1208570 | MtrunA17_Chr2g0311391 | 33.858 | 381 | 197 | 15 | 3 | 341 | 1 | 368 | 1.46e-55 | 186 |
| Msa1208570 | MtrunA17_Chr4g0035551 | 37.377 | 305 | 159 | 10 | 49 | 335 | 58 | 348 | 3.42e-55 | 184 |
| Msa1208570 | MtrunA17_Chr1g0156161 | 41.150 | 226 | 124 | 6 | 120 | 341 | 41 | 261 | 7.70e-55 | 181 |
| Msa1208570 | MtrunA17_Chr1g0199131 | 33.819 | 343 | 187 | 11 | 15 | 335 | 34 | 358 | 4.22e-54 | 182 |
| Msa1208570 | MtrunA17_Chr7g0248421 | 52.229 | 157 | 69 | 4 | 152 | 306 | 57 | 209 | 4.72e-45 | 154 |
| Msa1208570 | MtrunA17_Chr4g0036731 | 36.644 | 292 | 143 | 13 | 49 | 335 | 58 | 312 | 6.11e-40 | 144 |
| Msa1208570 | MtrunA17_Chr7g0248371 | 62.626 | 99 | 36 | 1 | 245 | 343 | 34 | 131 | 1.04e-39 | 138 |
| Msa1208570 | MtrunA17_Chr2g0283751 | 36.863 | 255 | 139 | 11 | 30 | 273 | 43 | 286 | 2.11e-39 | 141 |
| Msa1208570 | MtrunA17_Chr4g0036281 | 34.576 | 295 | 149 | 12 | 49 | 335 | 58 | 316 | 1.71e-37 | 137 |
| Msa1208570 | MtrunA17_Chr4g0037291 | 34.576 | 295 | 149 | 12 | 49 | 335 | 99 | 357 | 3.87e-37 | 137 |
| Msa1208570 | MtrunA17_Chr7g0248661 | 69.333 | 75 | 23 | 0 | 269 | 343 | 2 | 76 | 3.58e-33 | 118 |
| Msa1208570 | MtrunA17_Chr2g0283661 | 50.450 | 111 | 54 | 1 | 232 | 342 | 161 | 270 | 2.38e-32 | 122 |
| Msa1208570 | MtrunA17_Chr2g0283661 | 34.615 | 156 | 95 | 5 | 11 | 163 | 5 | 156 | 7.76e-20 | 88.2 |
| Msa1208570 | MtrunA17_Chr2g0311091 | 39.735 | 151 | 79 | 3 | 40 | 178 | 34 | 184 | 2.11e-26 | 103 |
| Msa1208570 | MtrunA17_Chr1g0156771 | 44.762 | 105 | 53 | 3 | 124 | 224 | 51 | 154 | 6.38e-25 | 99.4 |
| Msa1208570 | MtrunA17_Chr7g0271041 | 26.906 | 223 | 137 | 7 | 134 | 335 | 113 | 330 | 1.60e-21 | 94.4 |
| Msa1208570 | MtrunA17_Chr7g0271031 | 27.160 | 243 | 149 | 8 | 126 | 345 | 149 | 386 | 5.18e-21 | 93.6 |
| Msa1208570 | MtrunA17_Chr8g0379671 | 36.090 | 133 | 73 | 6 | 169 | 298 | 23 | 146 | 2.14e-13 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1208570 | AT5G50260.1 | 68.975 | 361 | 109 | 2 | 3 | 360 | 1 | 361 | 0.0 | 532 |
| Msa1208570 | AT3G48340.1 | 65.193 | 362 | 121 | 4 | 3 | 360 | 1 | 361 | 5.44e-172 | 483 |
| Msa1208570 | AT3G48350.1 | 62.222 | 360 | 134 | 2 | 3 | 360 | 1 | 360 | 2.57e-167 | 471 |
| Msa1208570 | AT3G48350.2 | 61.733 | 277 | 104 | 2 | 3 | 277 | 1 | 277 | 3.12e-122 | 354 |
| Msa1208570 | AT1G20850.1 | 52.795 | 322 | 147 | 4 | 25 | 344 | 36 | 354 | 2.88e-117 | 344 |
| Msa1208570 | AT5G45890.1 | 49.008 | 353 | 153 | 9 | 3 | 342 | 6 | 344 | 1.37e-115 | 339 |
| Msa1208570 | AT4G35350.1 | 49.568 | 347 | 160 | 6 | 6 | 344 | 14 | 353 | 1.84e-115 | 339 |
| Msa1208570 | AT3G19390.1 | 49.575 | 353 | 165 | 7 | 1 | 349 | 8 | 351 | 2.34e-113 | 337 |
| Msa1208570 | AT5G43060.1 | 51.105 | 362 | 153 | 8 | 1 | 345 | 1 | 355 | 3.46e-113 | 337 |
| Msa1208570 | AT1G47128.1 | 49.432 | 352 | 164 | 6 | 1 | 344 | 8 | 353 | 5.25e-110 | 329 |
| Msa1208570 | AT1G06260.1 | 48.094 | 341 | 167 | 6 | 7 | 344 | 10 | 343 | 2.90e-109 | 323 |
| Msa1208570 | AT4G36880.1 | 49.245 | 331 | 156 | 7 | 32 | 352 | 41 | 369 | 4.02e-108 | 322 |
| Msa1208570 | AT2G27420.1 | 49.221 | 321 | 152 | 6 | 33 | 343 | 28 | 347 | 1.03e-100 | 301 |
| Msa1208570 | AT3G19400.1 | 46.957 | 345 | 160 | 10 | 18 | 356 | 26 | 353 | 3.94e-100 | 300 |
| Msa1208570 | AT3G49340.1 | 47.785 | 316 | 157 | 6 | 33 | 343 | 28 | 340 | 7.92e-99 | 296 |
| Msa1208570 | AT4G11310.1 | 44.972 | 358 | 175 | 11 | 4 | 346 | 5 | 355 | 2.16e-98 | 296 |
| Msa1208570 | AT2G34080.1 | 44.857 | 350 | 171 | 7 | 6 | 343 | 5 | 344 | 1.22e-97 | 293 |
| Msa1208570 | AT4G11320.2 | 48.243 | 313 | 152 | 7 | 39 | 346 | 55 | 362 | 1.29e-97 | 295 |
| Msa1208570 | AT4G11320.1 | 48.243 | 313 | 152 | 7 | 39 | 346 | 55 | 362 | 1.29e-97 | 295 |
| Msa1208570 | AT4G23520.1 | 45.886 | 316 | 160 | 8 | 39 | 349 | 46 | 355 | 6.01e-95 | 287 |
| Msa1208570 | AT1G09850.1 | 48.065 | 310 | 153 | 6 | 38 | 344 | 30 | 334 | 2.88e-92 | 283 |
| Msa1208570 | AT1G29090.1 | 43.966 | 348 | 187 | 6 | 2 | 343 | 9 | 354 | 3.04e-92 | 280 |
| Msa1208570 | AT1G29080.1 | 43.614 | 321 | 170 | 7 | 30 | 343 | 29 | 345 | 7.76e-87 | 266 |
| Msa1208570 | AT4G35350.2 | 47.687 | 281 | 130 | 6 | 7 | 277 | 13 | 286 | 4.65e-83 | 254 |
| Msa1208570 | AT3G43960.1 | 42.151 | 344 | 179 | 12 | 13 | 347 | 18 | 350 | 2.99e-78 | 245 |
| Msa1208570 | AT1G29110.1 | 38.841 | 345 | 185 | 10 | 7 | 343 | 7 | 333 | 9.11e-74 | 232 |
| Msa1208570 | AT3G19400.2 | 45.977 | 261 | 127 | 8 | 18 | 272 | 26 | 278 | 1.25e-67 | 215 |
| Msa1208570 | AT5G60360.1 | 41.000 | 300 | 156 | 11 | 51 | 343 | 71 | 356 | 5.87e-63 | 205 |
| Msa1208570 | AT3G45310.1 | 41.000 | 300 | 156 | 11 | 51 | 343 | 71 | 356 | 7.49e-62 | 202 |
| Msa1208570 | AT5G60360.2 | 40.667 | 300 | 156 | 12 | 51 | 343 | 71 | 355 | 2.33e-60 | 198 |
| Msa1208570 | AT3G45310.2 | 40.667 | 300 | 156 | 12 | 51 | 343 | 71 | 355 | 2.99e-59 | 195 |
| Msa1208570 | AT5G60360.3 | 40.067 | 297 | 157 | 11 | 51 | 340 | 71 | 353 | 6.72e-59 | 194 |
| Msa1208570 | AT4G39090.1 | 38.835 | 309 | 160 | 9 | 44 | 335 | 56 | 352 | 1.94e-58 | 194 |
| Msa1208570 | AT2G21430.1 | 35.613 | 351 | 191 | 12 | 6 | 335 | 13 | 349 | 1.48e-57 | 191 |
| Msa1208570 | AT4G16190.1 | 36.700 | 297 | 163 | 8 | 55 | 335 | 71 | 358 | 3.50e-52 | 177 |
| Msa1208570 | AT3G54940.2 | 35.333 | 300 | 165 | 10 | 54 | 335 | 66 | 354 | 1.14e-49 | 171 |
| Msa1208570 | AT3G54940.3 | 35.185 | 216 | 125 | 6 | 54 | 259 | 66 | 276 | 7.12e-35 | 129 |
| Msa1208570 | AT1G02305.1 | 27.957 | 279 | 160 | 11 | 85 | 335 | 68 | 333 | 9.03e-25 | 103 |
| Msa1208570 | AT4G01610.1 | 25.887 | 282 | 168 | 11 | 85 | 338 | 65 | 333 | 2.63e-21 | 94.0 |
| Msa1208570 | AT2G22160.1 | 50.000 | 96 | 36 | 2 | 60 | 151 | 15 | 102 | 4.33e-21 | 87.4 |
| Msa1208570 | AT1G02300.1 | 29.048 | 210 | 123 | 6 | 147 | 335 | 146 | 350 | 3.40e-20 | 91.3 |
| Msa1208570 | AT4G01610.2 | 25.177 | 282 | 170 | 11 | 85 | 338 | 65 | 333 | 2.42e-19 | 88.6 |
Find 88 sgRNAs with CRISPR-Local
Find 228 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATAAGGCTTATCTAATTTAT+TGG | 0.217778 | 8_1:+66759482 | None:intergenic |
| ACATGACAAATTATGAATTT+AGG | 0.245011 | 8_1:-66759434 | Msa1208570:CDS |
| TTATTCAACTTAAGCTTATA+AGG | 0.250519 | 8_1:+66759465 | None:intergenic |
| AGCTAAGAGCTTTGATTTCC+AGG | 0.263284 | 8_1:-66759643 | Msa1208570:CDS |
| AGGATGCAACGGTGGGTTAA+TGG | 0.279883 | 8_1:-66758867 | Msa1208570:CDS |
| TAACTTGTATAGGTAGTTGC+TGG | 0.293976 | 8_1:-66758997 | Msa1208570:intron |
| CTCAAGATGGAACAAAATAT+TGG | 0.333579 | 8_1:-66758325 | Msa1208570:CDS |
| GAGCATCTATGCTGATTCTA+AGG | 0.335794 | 8_1:-66759412 | Msa1208570:CDS |
| GGGAAGTGAATGGGGAGAAC+AGG | 0.351413 | 8_1:-66758285 | Msa1208570:CDS |
| TAATTACAGGGAGTATTTAC+TGG | 0.363002 | 8_1:-66758401 | Msa1208570:intron |
| TCGATTGATTGGAGGAAGAT+AGG | 0.372632 | 8_1:-66759309 | Msa1208570:CDS |
| ATCATTTATAGCTCATCTTT+CGG | 0.372684 | 8_1:+66758149 | None:intergenic |
| TTCGAGTTCATCAAGCAAAA+TGG | 0.391365 | 8_1:-66758836 | Msa1208570:CDS |
| TCAACAATTGTAGCTGTTGA+AGG | 0.396428 | 8_1:-66758968 | Msa1208570:CDS |
| ATGTTCCTTCTTCGATTGAT+TGG | 0.402034 | 8_1:-66759320 | Msa1208570:CDS |
| TAGACCTTGCTTGTGAGATA+TGG | 0.415919 | 8_1:+66758241 | None:intergenic |
| ATTGGACAGTGAAGAACTCT+TGG | 0.427329 | 8_1:-66758307 | Msa1208570:CDS |
| AAACCAGCAGTGTCAATTGA+TGG | 0.433654 | 8_1:-66758629 | Msa1208570:CDS |
| GAACTCTTGGGGAAGTGAAT+GGG | 0.438030 | 8_1:-66758294 | Msa1208570:CDS |
| TATCTAATTTATTGGTATTG+TGG | 0.443235 | 8_1:+66759490 | None:intergenic |
| GCATCAATAGCTACAGAAAT+CGG | 0.448717 | 8_1:+66758548 | None:intergenic |
| AATGCTGCTTCATTGTTAGC+AGG | 0.455028 | 8_1:+66758593 | None:intergenic |
| GGGGTAGCAATTGTGGGGTA+TGG | 0.459702 | 8_1:-66758353 | Msa1208570:CDS |
| TAAAATCAAAGCTAGGGATA+AGG | 0.466804 | 8_1:+66759671 | None:intergenic |
| AGGTGCTGTCACCGGGGTAA+AGG | 0.468205 | 8_1:-66759289 | Msa1208570:CDS |
| GGAAGATAGGTGCTGTCACC+GGG | 0.470663 | 8_1:-66759296 | Msa1208570:CDS |
| ATTTCTGTAGCTATTGATGC+CGG | 0.473128 | 8_1:-66758545 | Msa1208570:CDS |
| TGGCCATCAATTGACACTGC+TGG | 0.473744 | 8_1:+66758626 | None:intergenic |
| AGCATCAGAGAAAAGTTTGT+GGG | 0.476908 | 8_1:-66759610 | Msa1208570:CDS |
| GAATCATGGGGTAGCAATTG+TGG | 0.479525 | 8_1:-66758360 | Msa1208570:CDS |
| TTGGACAGTGAAGAACTCTT+GGG | 0.479993 | 8_1:-66758306 | Msa1208570:CDS |
| AATCATGGGGTAGCAATTGT+GGG | 0.482862 | 8_1:-66758359 | Msa1208570:CDS |
| TTTCTGTAGCTATTGATGCC+GGG | 0.483109 | 8_1:-66758544 | Msa1208570:CDS |
| AGAACTCTTGGGGAAGTGAA+TGG | 0.483270 | 8_1:-66758295 | Msa1208570:CDS |
| TTATCCTTATGCTGCAAAAG+AGG | 0.485453 | 8_1:-66758795 | Msa1208570:CDS |
| TGTGGGATTTGTACGAGAGA+TGG | 0.486184 | 8_1:-66759593 | Msa1208570:CDS |
| AACTTGTATAGGTAGTTGCT+GGG | 0.493124 | 8_1:-66758996 | Msa1208570:intron |
| CTATTCCTAAAATCAAAGCT+AGG | 0.494841 | 8_1:+66759664 | None:intergenic |
| GGAAGTGAATGGGGAGAACA+GGG | 0.501956 | 8_1:-66758284 | Msa1208570:CDS |
| AGGTCTATGTGGCATAGCTA+TGG | 0.507498 | 8_1:-66758225 | Msa1208570:CDS |
| GGGAACCTGTAATATACAAA+AGG | 0.508036 | 8_1:-66758774 | Msa1208570:intron |
| TTCCTTCTTCGATTGATTGG+AGG | 0.508300 | 8_1:-66759317 | Msa1208570:CDS |
| TTCTGTAGCTATTGATGCCG+GGG | 0.509636 | 8_1:-66758543 | Msa1208570:CDS |
| TATCCTTATGCTGCAAAAGA+GGG | 0.511600 | 8_1:-66758794 | Msa1208570:CDS |
| AGCTACAGAAATCGGTTGGT+TGG | 0.518524 | 8_1:+66758556 | None:intergenic |
| AGGAAGATAGGTGCTGTCAC+CGG | 0.527243 | 8_1:-66759297 | Msa1208570:CDS |
| AACAAGTAAGCTTACCGCAT+TGG | 0.533561 | 8_1:+66759259 | None:intergenic |
| TGTGGTACTGAGCTGAATCA+TGG | 0.537115 | 8_1:-66758374 | Msa1208570:CDS |
| TTCCTCCAATCAATCGAAGA+AGG | 0.537545 | 8_1:+66759315 | None:intergenic |
| CACAAGTTCTTGCTCGGACA+AGG | 0.537976 | 8_1:+66758913 | None:intergenic |
| TATTCCTAAAATCAAAGCTA+GGG | 0.538115 | 8_1:+66759665 | None:intergenic |
| CTGATGCTAAGTCATTCTCC+TGG | 0.541617 | 8_1:+66759625 | None:intergenic |
| GTGGTACTGAGCTGAATCAT+GGG | 0.550981 | 8_1:-66758373 | Msa1208570:CDS |
| TGCGACACTAAAGTGAATCA+AGG | 0.551630 | 8_1:-66758887 | Msa1208570:CDS |
| GGGTATGGAGCAACTCAAGA+TGG | 0.553677 | 8_1:-66758338 | Msa1208570:CDS |
| GGGTTACATTAGAATGCAAA+GGG | 0.553947 | 8_1:-66758264 | Msa1208570:CDS |
| GTCACCGGGGTAAAGGATCA+AGG | 0.557892 | 8_1:-66759282 | Msa1208570:CDS |
| AACTCTTGGGGAAGTGAATG+GGG | 0.569712 | 8_1:-66758293 | Msa1208570:CDS |
| CATTGTCATGTGACAATCCA+CGG | 0.575595 | 8_1:+66759370 | None:intergenic |
| GCAATCCACAAGTTCTTGCT+CGG | 0.579328 | 8_1:+66758907 | None:intergenic |
| ATGCTGCTTCATTGTTAGCA+GGG | 0.581774 | 8_1:+66758594 | None:intergenic |
| TGTTAGCAGGGACATTCTCA+TGG | 0.582058 | 8_1:+66758606 | None:intergenic |
| TAGCATCAGAGAAAAGTTTG+TGG | 0.583867 | 8_1:-66759611 | Msa1208570:CDS |
| AAACTGGAAATCAGATCCCC+CGG | 0.593442 | 8_1:+66758526 | None:intergenic |
| GTGAATCAAGGATGCAACGG+TGG | 0.599603 | 8_1:-66758875 | Msa1208570:CDS |
| AGGGTTACATTAGAATGCAA+AGG | 0.601301 | 8_1:-66758265 | Msa1208570:CDS |
| TCTATGTGGCATAGCTATGG+AGG | 0.601740 | 8_1:-66758222 | Msa1208570:CDS |
| CAATAGCTACAGAAATCGGT+TGG | 0.603005 | 8_1:+66758552 | None:intergenic |
| CGTGGATTGTCACATGACAA+TGG | 0.604341 | 8_1:-66759369 | Msa1208570:CDS |
| CTTGTCCGAGCAAGAACTTG+TGG | 0.608838 | 8_1:-66758912 | Msa1208570:CDS |
| TCTCACAAGCAAGGTCTATG+TGG | 0.620594 | 8_1:-66758236 | Msa1208570:CDS |
| TGAATCAAGGATGCAACGGT+GGG | 0.628142 | 8_1:-66758874 | Msa1208570:CDS |
| TCTGTAGCTATTGATGCCGG+GGG | 0.632927 | 8_1:-66758542 | Msa1208570:CDS |
| TTGGCCTTGATCCTTTACCC+CGG | 0.635267 | 8_1:+66759278 | None:intergenic |
| TCCACATTCTCATACATGAA+CGG | 0.636776 | 8_1:+66759345 | None:intergenic |
| AATCATCATAGAATGTTCCG+TGG | 0.642215 | 8_1:-66759387 | Msa1208570:CDS |
| ACCGTTCATGTATGAGAATG+TGG | 0.645392 | 8_1:-66759346 | Msa1208570:CDS |
| AAAGTGAATCAAGGATGCAA+CGG | 0.646923 | 8_1:-66758878 | Msa1208570:CDS |
| AGGGCCATATCTCACAAGCA+AGG | 0.656245 | 8_1:-66758245 | Msa1208570:CDS |
| TGGACAGTGAAGAACTCTTG+GGG | 0.663115 | 8_1:-66758305 | Msa1208570:CDS |
| ATTGTGGACATGCATAACAT+TGG | 0.668124 | 8_1:+66759506 | None:intergenic |
| ATCATGGGGTAGCAATTGTG+GGG | 0.693047 | 8_1:-66758358 | Msa1208570:CDS |
| CAAGACTTCGAGTAACTGTG+TGG | 0.728098 | 8_1:+66759562 | None:intergenic |
| GGAGTATTTACTGGACACTG+TGG | 0.740210 | 8_1:-66758392 | Msa1208570:CDS |
| TGGTACTGAGCTGAATCATG+GGG | 0.741700 | 8_1:-66758372 | Msa1208570:CDS |
| GAAGATAGGTGCTGTCACCG+GGG | 0.757764 | 8_1:-66759295 | Msa1208570:CDS |
| GTTCATGTATGAGAATGTGG+AGG | 0.769545 | 8_1:-66759343 | Msa1208570:CDS |
| GTAAAGGATCAAGGCCAATG+CGG | 0.813840 | 8_1:-66759273 | Msa1208570:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTTATTAATTATATATT+AGG | + | chr8_1:66759137-66759156 | None:intergenic | 0.0% |
| !! | AAATTTATTAATTATATATT+AGG | + | chr8_1:66759137-66759156 | None:intergenic | 0.0% |
| !!! | AATTTTATTTGATTAACTTA+TGG | - | chr8_1:66759152-66759171 | Msa1208570:intron | 10.0% |
| !!! | ATTTTATTTGATTAACTTAT+GGG | - | chr8_1:66759153-66759172 | Msa1208570:intron | 10.0% |
| !!! | ATATTTTTGTAATTAAAAGT+GGG | + | chr8_1:66759433-66759452 | None:intergenic | 10.0% |
| !!! | TATATTTTTGTAATTAAAAG+TGG | + | chr8_1:66759434-66759453 | None:intergenic | 10.0% |
| !! | AATTACAAAAATATAATTAC+AGG | - | chr8_1:66759439-66759458 | Msa1208570:CDS | 10.0% |
| !! | ATTACAAAAATATAATTACA+GGG | - | chr8_1:66759440-66759459 | Msa1208570:CDS | 10.0% |
| !!! | AATTTTATTTGATTAACTTA+TGG | - | chr8_1:66759152-66759171 | Msa1208570:intron | 10.0% |
| !!! | ATTTTATTTGATTAACTTAT+GGG | - | chr8_1:66759153-66759172 | Msa1208570:intron | 10.0% |
| !!! | ATATTTTTGTAATTAAAAGT+GGG | + | chr8_1:66759433-66759452 | None:intergenic | 10.0% |
| !!! | TATATTTTTGTAATTAAAAG+TGG | + | chr8_1:66759434-66759453 | None:intergenic | 10.0% |
| !! | AATTACAAAAATATAATTAC+AGG | - | chr8_1:66759439-66759458 | Msa1208570:CDS | 10.0% |
| !! | ATTACAAAAATATAATTACA+GGG | - | chr8_1:66759440-66759459 | Msa1208570:CDS | 10.0% |
| !! | TATCTAATTTATTGGTATTG+TGG | + | chr8_1:66758366-66758385 | None:intergenic | 20.0% |
| !! | ATAAGGCTTATCTAATTTAT+TGG | + | chr8_1:66758374-66758393 | None:intergenic | 20.0% |
| !! | TTATTCAACTTAAGCTTATA+AGG | + | chr8_1:66758391-66758410 | None:intergenic | 20.0% |
| !! | ACATGACAAATTATGAATTT+AGG | - | chr8_1:66758419-66758438 | Msa1208570:intron | 20.0% |
| !! | TATCTAATTTATTGGTATTG+TGG | + | chr8_1:66758366-66758385 | None:intergenic | 20.0% |
| !! | ATAAGGCTTATCTAATTTAT+TGG | + | chr8_1:66758374-66758393 | None:intergenic | 20.0% |
| !! | TTATTCAACTTAAGCTTATA+AGG | + | chr8_1:66758391-66758410 | None:intergenic | 20.0% |
| !! | ACATGACAAATTATGAATTT+AGG | - | chr8_1:66758419-66758438 | Msa1208570:intron | 20.0% |
| ! | TATTCCTAAAATCAAAGCTA+GGG | + | chr8_1:66758191-66758210 | None:intergenic | 25.0% |
| ! | ATAATCAAATACAGACTAAG+TGG | + | chr8_1:66758733-66758752 | None:intergenic | 25.0% |
| ! | TCTGTATTTGATTATACGTT+TGG | - | chr8_1:66758738-66758757 | Msa1208570:intron | 25.0% |
| !!! | GAATTGTTTCTAACTTGTAT+AGG | - | chr8_1:66758846-66758865 | Msa1208570:CDS | 25.0% |
| ! | CAAGTGAAAATGTGTTAATT+TGG | + | chr8_1:66759192-66759211 | None:intergenic | 25.0% |
| !! | TTTTCAGATGACTTTTTGAT+TGG | + | chr8_1:66759665-66759684 | None:intergenic | 25.0% |
| ! | TATTCCTAAAATCAAAGCTA+GGG | + | chr8_1:66758191-66758210 | None:intergenic | 25.0% |
| ! | ATAATCAAATACAGACTAAG+TGG | + | chr8_1:66758733-66758752 | None:intergenic | 25.0% |
| ! | TCTGTATTTGATTATACGTT+TGG | - | chr8_1:66758738-66758757 | Msa1208570:intron | 25.0% |
| !!! | GAATTGTTTCTAACTTGTAT+AGG | - | chr8_1:66758846-66758865 | Msa1208570:CDS | 25.0% |
| ! | CAAGTGAAAATGTGTTAATT+TGG | + | chr8_1:66759192-66759211 | None:intergenic | 25.0% |
| !! | TTTTCAGATGACTTTTTGAT+TGG | + | chr8_1:66759665-66759684 | None:intergenic | 25.0% |
| TAAAATCAAAGCTAGGGATA+AGG | + | chr8_1:66758185-66758204 | None:intergenic | 30.0% | |
| !!! | TTATCCCTAGCTTTGATTTT+AGG | - | chr8_1:66758184-66758203 | Msa1208570:CDS | 30.0% |
| CTATTCCTAAAATCAAAGCT+AGG | + | chr8_1:66758192-66758211 | None:intergenic | 30.0% | |
| TTCAAGCGATTTAACTAACA+TGG | + | chr8_1:66758687-66758706 | None:intergenic | 30.0% | |
| !! | GTTCTGAAGTAGAATTGATT+TGG | - | chr8_1:66758817-66758836 | Msa1208570:CDS | 30.0% |
| ! | AACACATTTTCACTTGATGT+AGG | - | chr8_1:66759196-66759215 | Msa1208570:intron | 30.0% |
| !!! | TGATTTCCAGTTTTATTCAG+AGG | - | chr8_1:66759337-66759356 | Msa1208570:CDS | 30.0% |
| ! | GTTTTACCTCTGAATAAAAC+TGG | + | chr8_1:66759346-66759365 | None:intergenic | 30.0% |
| TGTAATTAAAAGTGGGATCA+AGG | + | chr8_1:66759426-66759445 | None:intergenic | 30.0% | |
| !! | TAATTACAGGGAGTATTTAC+TGG | - | chr8_1:66759452-66759471 | Msa1208570:CDS | 30.0% |
| CTCAAGATGGAACAAAATAT+TGG | - | chr8_1:66759528-66759547 | Msa1208570:CDS | 30.0% | |
| TAAAATCAAAGCTAGGGATA+AGG | + | chr8_1:66758185-66758204 | None:intergenic | 30.0% | |
| !!! | TTATCCCTAGCTTTGATTTT+AGG | - | chr8_1:66758184-66758203 | Msa1208570:CDS | 30.0% |
| CTATTCCTAAAATCAAAGCT+AGG | + | chr8_1:66758192-66758211 | None:intergenic | 30.0% | |
| TTCAAGCGATTTAACTAACA+TGG | + | chr8_1:66758687-66758706 | None:intergenic | 30.0% | |
| !! | GTTCTGAAGTAGAATTGATT+TGG | - | chr8_1:66758817-66758836 | Msa1208570:CDS | 30.0% |
| ! | AACACATTTTCACTTGATGT+AGG | - | chr8_1:66759196-66759215 | Msa1208570:intron | 30.0% |
| !!! | TGATTTCCAGTTTTATTCAG+AGG | - | chr8_1:66759337-66759356 | Msa1208570:CDS | 30.0% |
| ! | GTTTTACCTCTGAATAAAAC+TGG | + | chr8_1:66759346-66759365 | None:intergenic | 30.0% |
| TGTAATTAAAAGTGGGATCA+AGG | + | chr8_1:66759426-66759445 | None:intergenic | 30.0% | |
| !! | TAATTACAGGGAGTATTTAC+TGG | - | chr8_1:66759452-66759471 | Msa1208570:CDS | 30.0% |
| CTCAAGATGGAACAAAATAT+TGG | - | chr8_1:66759528-66759547 | Msa1208570:CDS | 30.0% | |
| TAGCATCAGAGAAAAGTTTG+TGG | - | chr8_1:66758242-66758261 | Msa1208570:CDS | 35.0% | |
| AGCATCAGAGAAAAGTTTGT+GGG | - | chr8_1:66758243-66758262 | Msa1208570:CDS | 35.0% | |
| ATTGTGGACATGCATAACAT+TGG | + | chr8_1:66758350-66758369 | None:intergenic | 35.0% | |
| AATCATCATAGAATGTTCCG+TGG | - | chr8_1:66758466-66758485 | Msa1208570:intron | 35.0% | |
| TCCACATTCTCATACATGAA+CGG | + | chr8_1:66758511-66758530 | None:intergenic | 35.0% | |
| ATGTTCCTTCTTCGATTGAT+TGG | - | chr8_1:66758533-66758552 | Msa1208570:CDS | 35.0% | |
| GTTTGGATCCAAAATTGATC+TGG | - | chr8_1:66758755-66758774 | Msa1208570:intron | 35.0% | |
| ! | TAACTTGTATAGGTAGTTGC+TGG | - | chr8_1:66758856-66758875 | Msa1208570:CDS | 35.0% |
| AACTTGTATAGGTAGTTGCT+GGG | - | chr8_1:66758857-66758876 | Msa1208570:CDS | 35.0% | |
| TCAACAATTGTAGCTGTTGA+AGG | - | chr8_1:66758885-66758904 | Msa1208570:CDS | 35.0% | |
| !! | CTAGTTTTCGTGTCTTGATT+TGG | + | chr8_1:66758917-66758936 | None:intergenic | 35.0% |
| AAAGTGAATCAAGGATGCAA+CGG | - | chr8_1:66758975-66758994 | Msa1208570:CDS | 35.0% | |
| ! | TTCGAGTTCATCAAGCAAAA+TGG | - | chr8_1:66759017-66759036 | Msa1208570:intron | 35.0% |
| TTATCCTTATGCTGCAAAAG+AGG | - | chr8_1:66759058-66759077 | Msa1208570:intron | 35.0% | |
| TATCCTTATGCTGCAAAAGA+GGG | - | chr8_1:66759059-66759078 | Msa1208570:intron | 35.0% | |
| GGGAACCTGTAATATACAAA+AGG | - | chr8_1:66759079-66759098 | Msa1208570:intron | 35.0% | |
| ! | GTGCACCTTTTGTATATTAC+AGG | + | chr8_1:66759087-66759106 | None:intergenic | 35.0% |
| GCATCAATAGCTACAGAAAT+CGG | + | chr8_1:66759308-66759327 | None:intergenic | 35.0% | |
| ATTTCTGTAGCTATTGATGC+CGG | - | chr8_1:66759308-66759327 | Msa1208570:CDS | 35.0% | |
| AGGGTTACATTAGAATGCAA+AGG | - | chr8_1:66759588-66759607 | Msa1208570:CDS | 35.0% | |
| GGGTTACATTAGAATGCAAA+GGG | - | chr8_1:66759589-66759608 | Msa1208570:CDS | 35.0% | |
| ! | TCGGAAGTGAACTTTTTGTT+GGG | + | chr8_1:66759688-66759707 | None:intergenic | 35.0% |
| ! | TTCGGAAGTGAACTTTTTGT+TGG | + | chr8_1:66759689-66759708 | None:intergenic | 35.0% |
| TAGCATCAGAGAAAAGTTTG+TGG | - | chr8_1:66758242-66758261 | Msa1208570:CDS | 35.0% | |
| AGCATCAGAGAAAAGTTTGT+GGG | - | chr8_1:66758243-66758262 | Msa1208570:CDS | 35.0% | |
| ATTGTGGACATGCATAACAT+TGG | + | chr8_1:66758350-66758369 | None:intergenic | 35.0% | |
| AATCATCATAGAATGTTCCG+TGG | - | chr8_1:66758466-66758485 | Msa1208570:intron | 35.0% | |
| TCCACATTCTCATACATGAA+CGG | + | chr8_1:66758511-66758530 | None:intergenic | 35.0% | |
| ATGTTCCTTCTTCGATTGAT+TGG | - | chr8_1:66758533-66758552 | Msa1208570:CDS | 35.0% | |
| GTTTGGATCCAAAATTGATC+TGG | - | chr8_1:66758755-66758774 | Msa1208570:intron | 35.0% | |
| ! | TAACTTGTATAGGTAGTTGC+TGG | - | chr8_1:66758856-66758875 | Msa1208570:CDS | 35.0% |
| AACTTGTATAGGTAGTTGCT+GGG | - | chr8_1:66758857-66758876 | Msa1208570:CDS | 35.0% | |
| TCAACAATTGTAGCTGTTGA+AGG | - | chr8_1:66758885-66758904 | Msa1208570:CDS | 35.0% | |
| !! | CTAGTTTTCGTGTCTTGATT+TGG | + | chr8_1:66758917-66758936 | None:intergenic | 35.0% |
| AAAGTGAATCAAGGATGCAA+CGG | - | chr8_1:66758975-66758994 | Msa1208570:CDS | 35.0% | |
| ! | TTCGAGTTCATCAAGCAAAA+TGG | - | chr8_1:66759017-66759036 | Msa1208570:intron | 35.0% |
| TTATCCTTATGCTGCAAAAG+AGG | - | chr8_1:66759058-66759077 | Msa1208570:intron | 35.0% | |
| TATCCTTATGCTGCAAAAGA+GGG | - | chr8_1:66759059-66759078 | Msa1208570:intron | 35.0% | |
| GGGAACCTGTAATATACAAA+AGG | - | chr8_1:66759079-66759098 | Msa1208570:intron | 35.0% | |
| ! | GTGCACCTTTTGTATATTAC+AGG | + | chr8_1:66759087-66759106 | None:intergenic | 35.0% |
| GCATCAATAGCTACAGAAAT+CGG | + | chr8_1:66759308-66759327 | None:intergenic | 35.0% | |
| ATTTCTGTAGCTATTGATGC+CGG | - | chr8_1:66759308-66759327 | Msa1208570:CDS | 35.0% | |
| AGGGTTACATTAGAATGCAA+AGG | - | chr8_1:66759588-66759607 | Msa1208570:CDS | 35.0% | |
| GGGTTACATTAGAATGCAAA+GGG | - | chr8_1:66759589-66759608 | Msa1208570:CDS | 35.0% | |
| ! | TCGGAAGTGAACTTTTTGTT+GGG | + | chr8_1:66759688-66759707 | None:intergenic | 35.0% |
| ! | TTCGGAAGTGAACTTTTTGT+TGG | + | chr8_1:66759689-66759708 | None:intergenic | 35.0% |
| ! | AGCTAAGAGCTTTGATTTCC+AGG | - | chr8_1:66758210-66758229 | Msa1208570:CDS | 40.0% |
| !! | GAGCATCTATGCTGATTCTA+AGG | - | chr8_1:66758441-66758460 | Msa1208570:intron | 40.0% |
| CATTGTCATGTGACAATCCA+CGG | + | chr8_1:66758486-66758505 | None:intergenic | 40.0% | |
| ACCGTTCATGTATGAGAATG+TGG | - | chr8_1:66758507-66758526 | Msa1208570:intron | 40.0% | |
| GTTCATGTATGAGAATGTGG+AGG | - | chr8_1:66758510-66758529 | Msa1208570:intron | 40.0% | |
| TTCCTTCTTCGATTGATTGG+AGG | - | chr8_1:66758536-66758555 | Msa1208570:CDS | 40.0% | |
| TTCCTCCAATCAATCGAAGA+AGG | + | chr8_1:66758541-66758560 | None:intergenic | 40.0% | |
| TCGATTGATTGGAGGAAGAT+AGG | - | chr8_1:66758544-66758563 | Msa1208570:CDS | 40.0% | |
| AACAAGTAAGCTTACCGCAT+TGG | + | chr8_1:66758597-66758616 | None:intergenic | 40.0% | |
| ! | CCAGTTCTCCAGATCAATTT+TGG | + | chr8_1:66758766-66758785 | None:intergenic | 40.0% |
| CCAAAATTGATCTGGAGAAC+TGG | - | chr8_1:66758763-66758782 | Msa1208570:intron | 40.0% | |
| TGCGACACTAAAGTGAATCA+AGG | - | chr8_1:66758966-66758985 | Msa1208570:CDS | 40.0% | |
| AAACCAGCAGTGTCAATTGA+TGG | - | chr8_1:66759224-66759243 | Msa1208570:intron | 40.0% | |
| ! | ATGCTGCTTCATTGTTAGCA+GGG | + | chr8_1:66759262-66759281 | None:intergenic | 40.0% |
| ! | AATGCTGCTTCATTGTTAGC+AGG | + | chr8_1:66759263-66759282 | None:intergenic | 40.0% |
| CAATAGCTACAGAAATCGGT+TGG | + | chr8_1:66759304-66759323 | None:intergenic | 40.0% | |
| TTTCTGTAGCTATTGATGCC+GGG | - | chr8_1:66759309-66759328 | Msa1208570:CDS | 40.0% | |
| AATCATGGGGTAGCAATTGT+GGG | - | chr8_1:66759494-66759513 | Msa1208570:CDS | 40.0% | |
| ATTGGACAGTGAAGAACTCT+TGG | - | chr8_1:66759546-66759565 | Msa1208570:CDS | 40.0% | |
| TTGGACAGTGAAGAACTCTT+GGG | - | chr8_1:66759547-66759566 | Msa1208570:CDS | 40.0% | |
| TAGACCTTGCTTGTGAGATA+TGG | + | chr8_1:66759615-66759634 | None:intergenic | 40.0% | |
| ! | AGCTAAGAGCTTTGATTTCC+AGG | - | chr8_1:66758210-66758229 | Msa1208570:CDS | 40.0% |
| !! | GAGCATCTATGCTGATTCTA+AGG | - | chr8_1:66758441-66758460 | Msa1208570:intron | 40.0% |
| CATTGTCATGTGACAATCCA+CGG | + | chr8_1:66758486-66758505 | None:intergenic | 40.0% | |
| ACCGTTCATGTATGAGAATG+TGG | - | chr8_1:66758507-66758526 | Msa1208570:intron | 40.0% | |
| GTTCATGTATGAGAATGTGG+AGG | - | chr8_1:66758510-66758529 | Msa1208570:intron | 40.0% | |
| TTCCTTCTTCGATTGATTGG+AGG | - | chr8_1:66758536-66758555 | Msa1208570:CDS | 40.0% | |
| TTCCTCCAATCAATCGAAGA+AGG | + | chr8_1:66758541-66758560 | None:intergenic | 40.0% | |
| TCGATTGATTGGAGGAAGAT+AGG | - | chr8_1:66758544-66758563 | Msa1208570:CDS | 40.0% | |
| AACAAGTAAGCTTACCGCAT+TGG | + | chr8_1:66758597-66758616 | None:intergenic | 40.0% | |
| ! | CCAGTTCTCCAGATCAATTT+TGG | + | chr8_1:66758766-66758785 | None:intergenic | 40.0% |
| CCAAAATTGATCTGGAGAAC+TGG | - | chr8_1:66758763-66758782 | Msa1208570:intron | 40.0% | |
| TGCGACACTAAAGTGAATCA+AGG | - | chr8_1:66758966-66758985 | Msa1208570:CDS | 40.0% | |
| AAACCAGCAGTGTCAATTGA+TGG | - | chr8_1:66759224-66759243 | Msa1208570:intron | 40.0% | |
| ! | ATGCTGCTTCATTGTTAGCA+GGG | + | chr8_1:66759262-66759281 | None:intergenic | 40.0% |
| ! | AATGCTGCTTCATTGTTAGC+AGG | + | chr8_1:66759263-66759282 | None:intergenic | 40.0% |
| CAATAGCTACAGAAATCGGT+TGG | + | chr8_1:66759304-66759323 | None:intergenic | 40.0% | |
| TTTCTGTAGCTATTGATGCC+GGG | - | chr8_1:66759309-66759328 | Msa1208570:CDS | 40.0% | |
| AATCATGGGGTAGCAATTGT+GGG | - | chr8_1:66759494-66759513 | Msa1208570:CDS | 40.0% | |
| ATTGGACAGTGAAGAACTCT+TGG | - | chr8_1:66759546-66759565 | Msa1208570:CDS | 40.0% | |
| TTGGACAGTGAAGAACTCTT+GGG | - | chr8_1:66759547-66759566 | Msa1208570:CDS | 40.0% | |
| TAGACCTTGCTTGTGAGATA+TGG | + | chr8_1:66759615-66759634 | None:intergenic | 40.0% | |
| CTGATGCTAAGTCATTCTCC+TGG | + | chr8_1:66758231-66758250 | None:intergenic | 45.0% | |
| TGTGGGATTTGTACGAGAGA+TGG | - | chr8_1:66758260-66758279 | Msa1208570:CDS | 45.0% | |
| CAAGACTTCGAGTAACTGTG+TGG | + | chr8_1:66758294-66758313 | None:intergenic | 45.0% | |
| ! | CGTGGATTGTCACATGACAA+TGG | - | chr8_1:66758484-66758503 | Msa1208570:intron | 45.0% |
| GTAAAGGATCAAGGCCAATG+CGG | - | chr8_1:66758580-66758599 | Msa1208570:CDS | 45.0% | |
| GCAATCCACAAGTTCTTGCT+CGG | + | chr8_1:66758949-66758968 | None:intergenic | 45.0% | |
| TGAATCAAGGATGCAACGGT+GGG | - | chr8_1:66758979-66758998 | Msa1208570:CDS | 45.0% | |
| ! | GTTCCCTCTTTTGCAGCATA+AGG | + | chr8_1:66759065-66759084 | None:intergenic | 45.0% |
| TGTTAGCAGGGACATTCTCA+TGG | + | chr8_1:66759250-66759269 | None:intergenic | 45.0% | |
| AGCTACAGAAATCGGTTGGT+TGG | + | chr8_1:66759300-66759319 | None:intergenic | 45.0% | |
| TTCTGTAGCTATTGATGCCG+GGG | - | chr8_1:66759310-66759329 | Msa1208570:CDS | 45.0% | |
| AAACTGGAAATCAGATCCCC+CGG | + | chr8_1:66759330-66759349 | None:intergenic | 45.0% | |
| ! | GGAGTATTTACTGGACACTG+TGG | - | chr8_1:66759461-66759480 | Msa1208570:CDS | 45.0% |
| ! | TGTGGTACTGAGCTGAATCA+TGG | - | chr8_1:66759479-66759498 | Msa1208570:CDS | 45.0% |
| ! | GTGGTACTGAGCTGAATCAT+GGG | - | chr8_1:66759480-66759499 | Msa1208570:CDS | 45.0% |
| ! | TGGTACTGAGCTGAATCATG+GGG | - | chr8_1:66759481-66759500 | Msa1208570:CDS | 45.0% |
| GAATCATGGGGTAGCAATTG+TGG | - | chr8_1:66759493-66759512 | Msa1208570:CDS | 45.0% | |
| ATCATGGGGTAGCAATTGTG+GGG | - | chr8_1:66759495-66759514 | Msa1208570:CDS | 45.0% | |
| TGGACAGTGAAGAACTCTTG+GGG | - | chr8_1:66759548-66759567 | Msa1208570:CDS | 45.0% | |
| AGAACTCTTGGGGAAGTGAA+TGG | - | chr8_1:66759558-66759577 | Msa1208570:CDS | 45.0% | |
| GAACTCTTGGGGAAGTGAAT+GGG | - | chr8_1:66759559-66759578 | Msa1208570:CDS | 45.0% | |
| AACTCTTGGGGAAGTGAATG+GGG | - | chr8_1:66759560-66759579 | Msa1208570:CDS | 45.0% | |
| TCTCACAAGCAAGGTCTATG+TGG | - | chr8_1:66759617-66759636 | Msa1208570:CDS | 45.0% | |
| AGGTCTATGTGGCATAGCTA+TGG | - | chr8_1:66759628-66759647 | Msa1208570:CDS | 45.0% | |
| TCTATGTGGCATAGCTATGG+AGG | - | chr8_1:66759631-66759650 | Msa1208570:CDS | 45.0% | |
| CTGATGCTAAGTCATTCTCC+TGG | + | chr8_1:66758231-66758250 | None:intergenic | 45.0% | |
| TGTGGGATTTGTACGAGAGA+TGG | - | chr8_1:66758260-66758279 | Msa1208570:CDS | 45.0% | |
| CAAGACTTCGAGTAACTGTG+TGG | + | chr8_1:66758294-66758313 | None:intergenic | 45.0% | |
| ! | CGTGGATTGTCACATGACAA+TGG | - | chr8_1:66758484-66758503 | Msa1208570:intron | 45.0% |
| GTAAAGGATCAAGGCCAATG+CGG | - | chr8_1:66758580-66758599 | Msa1208570:CDS | 45.0% | |
| GCAATCCACAAGTTCTTGCT+CGG | + | chr8_1:66758949-66758968 | None:intergenic | 45.0% | |
| TGAATCAAGGATGCAACGGT+GGG | - | chr8_1:66758979-66758998 | Msa1208570:CDS | 45.0% | |
| ! | GTTCCCTCTTTTGCAGCATA+AGG | + | chr8_1:66759065-66759084 | None:intergenic | 45.0% |
| TGTTAGCAGGGACATTCTCA+TGG | + | chr8_1:66759250-66759269 | None:intergenic | 45.0% | |
| AGCTACAGAAATCGGTTGGT+TGG | + | chr8_1:66759300-66759319 | None:intergenic | 45.0% | |
| TTCTGTAGCTATTGATGCCG+GGG | - | chr8_1:66759310-66759329 | Msa1208570:CDS | 45.0% | |
| AAACTGGAAATCAGATCCCC+CGG | + | chr8_1:66759330-66759349 | None:intergenic | 45.0% | |
| ! | GGAGTATTTACTGGACACTG+TGG | - | chr8_1:66759461-66759480 | Msa1208570:CDS | 45.0% |
| ! | TGTGGTACTGAGCTGAATCA+TGG | - | chr8_1:66759479-66759498 | Msa1208570:CDS | 45.0% |
| ! | GTGGTACTGAGCTGAATCAT+GGG | - | chr8_1:66759480-66759499 | Msa1208570:CDS | 45.0% |
| ! | TGGTACTGAGCTGAATCATG+GGG | - | chr8_1:66759481-66759500 | Msa1208570:CDS | 45.0% |
| GAATCATGGGGTAGCAATTG+TGG | - | chr8_1:66759493-66759512 | Msa1208570:CDS | 45.0% | |
| ATCATGGGGTAGCAATTGTG+GGG | - | chr8_1:66759495-66759514 | Msa1208570:CDS | 45.0% | |
| TGGACAGTGAAGAACTCTTG+GGG | - | chr8_1:66759548-66759567 | Msa1208570:CDS | 45.0% | |
| AGAACTCTTGGGGAAGTGAA+TGG | - | chr8_1:66759558-66759577 | Msa1208570:CDS | 45.0% | |
| GAACTCTTGGGGAAGTGAAT+GGG | - | chr8_1:66759559-66759578 | Msa1208570:CDS | 45.0% | |
| AACTCTTGGGGAAGTGAATG+GGG | - | chr8_1:66759560-66759579 | Msa1208570:CDS | 45.0% | |
| TCTCACAAGCAAGGTCTATG+TGG | - | chr8_1:66759617-66759636 | Msa1208570:CDS | 45.0% | |
| AGGTCTATGTGGCATAGCTA+TGG | - | chr8_1:66759628-66759647 | Msa1208570:CDS | 45.0% | |
| TCTATGTGGCATAGCTATGG+AGG | - | chr8_1:66759631-66759650 | Msa1208570:CDS | 45.0% | |
| ! | AGGAAGATAGGTGCTGTCAC+CGG | - | chr8_1:66758556-66758575 | Msa1208570:CDS | 50.0% |
| !! | TTGGCCTTGATCCTTTACCC+CGG | + | chr8_1:66758578-66758597 | None:intergenic | 50.0% |
| CACAAGTTCTTGCTCGGACA+AGG | + | chr8_1:66758943-66758962 | None:intergenic | 50.0% | |
| CTTGTCCGAGCAAGAACTTG+TGG | - | chr8_1:66758941-66758960 | Msa1208570:CDS | 50.0% | |
| GTGAATCAAGGATGCAACGG+TGG | - | chr8_1:66758978-66758997 | Msa1208570:CDS | 50.0% | |
| !! | AGGATGCAACGGTGGGTTAA+TGG | - | chr8_1:66758986-66759005 | Msa1208570:CDS | 50.0% |
| TGGCCATCAATTGACACTGC+TGG | + | chr8_1:66759230-66759249 | None:intergenic | 50.0% | |
| TCTGTAGCTATTGATGCCGG+GGG | - | chr8_1:66759311-66759330 | Msa1208570:CDS | 50.0% | |
| GGGTATGGAGCAACTCAAGA+TGG | - | chr8_1:66759515-66759534 | Msa1208570:CDS | 50.0% | |
| GGAAGTGAATGGGGAGAACA+GGG | - | chr8_1:66759569-66759588 | Msa1208570:CDS | 50.0% | |
| AGGGCCATATCTCACAAGCA+AGG | - | chr8_1:66759608-66759627 | Msa1208570:CDS | 50.0% | |
| ! | AGGAAGATAGGTGCTGTCAC+CGG | - | chr8_1:66758556-66758575 | Msa1208570:CDS | 50.0% |
| !! | TTGGCCTTGATCCTTTACCC+CGG | + | chr8_1:66758578-66758597 | None:intergenic | 50.0% |
| CACAAGTTCTTGCTCGGACA+AGG | + | chr8_1:66758943-66758962 | None:intergenic | 50.0% | |
| CTTGTCCGAGCAAGAACTTG+TGG | - | chr8_1:66758941-66758960 | Msa1208570:CDS | 50.0% | |
| GTGAATCAAGGATGCAACGG+TGG | - | chr8_1:66758978-66758997 | Msa1208570:CDS | 50.0% | |
| !! | AGGATGCAACGGTGGGTTAA+TGG | - | chr8_1:66758986-66759005 | Msa1208570:CDS | 50.0% |
| TGGCCATCAATTGACACTGC+TGG | + | chr8_1:66759230-66759249 | None:intergenic | 50.0% | |
| TCTGTAGCTATTGATGCCGG+GGG | - | chr8_1:66759311-66759330 | Msa1208570:CDS | 50.0% | |
| GGGTATGGAGCAACTCAAGA+TGG | - | chr8_1:66759515-66759534 | Msa1208570:CDS | 50.0% | |
| GGAAGTGAATGGGGAGAACA+GGG | - | chr8_1:66759569-66759588 | Msa1208570:CDS | 50.0% | |
| AGGGCCATATCTCACAAGCA+AGG | - | chr8_1:66759608-66759627 | Msa1208570:CDS | 50.0% | |
| ! | GGAAGATAGGTGCTGTCACC+GGG | - | chr8_1:66758557-66758576 | Msa1208570:CDS | 55.0% |
| ! | GAAGATAGGTGCTGTCACCG+GGG | - | chr8_1:66758558-66758577 | Msa1208570:CDS | 55.0% |
| GTCACCGGGGTAAAGGATCA+AGG | - | chr8_1:66758571-66758590 | Msa1208570:CDS | 55.0% | |
| GGGGTAGCAATTGTGGGGTA+TGG | - | chr8_1:66759500-66759519 | Msa1208570:CDS | 55.0% | |
| GGGAAGTGAATGGGGAGAAC+AGG | - | chr8_1:66759568-66759587 | Msa1208570:CDS | 55.0% | |
| ! | GGAAGATAGGTGCTGTCACC+GGG | - | chr8_1:66758557-66758576 | Msa1208570:CDS | 55.0% |
| ! | GAAGATAGGTGCTGTCACCG+GGG | - | chr8_1:66758558-66758577 | Msa1208570:CDS | 55.0% |
| GTCACCGGGGTAAAGGATCA+AGG | - | chr8_1:66758571-66758590 | Msa1208570:CDS | 55.0% | |
| GGGGTAGCAATTGTGGGGTA+TGG | - | chr8_1:66759500-66759519 | Msa1208570:CDS | 55.0% | |
| GGGAAGTGAATGGGGAGAAC+AGG | - | chr8_1:66759568-66759587 | Msa1208570:CDS | 55.0% | |
| ! | AGGTGCTGTCACCGGGGTAA+AGG | - | chr8_1:66758564-66758583 | Msa1208570:CDS | 60.0% |
| ! | AGGTGCTGTCACCGGGGTAA+AGG | - | chr8_1:66758564-66758583 | Msa1208570:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 66758154 | 66759721 | 66758154 | ID=Msa1208570;Name=Msa1208570 |
| chr8_1 | mRNA | 66758154 | 66759721 | 66758154 | ID=Msa1208570-mRNA-1;Parent=Msa1208570;Name=Msa1208570-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|1|0.5|1|1|1|4|0|360 |
| chr8_1 | exon | 66759274 | 66759721 | 66759274 | ID=Msa1208570-mRNA-1:exon:21992;Parent=Msa1208570-mRNA-1 |
| chr8_1 | exon | 66758775 | 66759007 | 66758775 | ID=Msa1208570-mRNA-1:exon:21991;Parent=Msa1208570-mRNA-1 |
| chr8_1 | exon | 66758517 | 66758657 | 66758517 | ID=Msa1208570-mRNA-1:exon:21990;Parent=Msa1208570-mRNA-1 |
| chr8_1 | exon | 66758154 | 66758414 | 66758154 | ID=Msa1208570-mRNA-1:exon:21989;Parent=Msa1208570-mRNA-1 |
| chr8_1 | CDS | 66759274 | 66759721 | 66759274 | ID=Msa1208570-mRNA-1:cds;Parent=Msa1208570-mRNA-1 |
| chr8_1 | CDS | 66758775 | 66759007 | 66758775 | ID=Msa1208570-mRNA-1:cds;Parent=Msa1208570-mRNA-1 |
| chr8_1 | CDS | 66758517 | 66758657 | 66758517 | ID=Msa1208570-mRNA-1:cds;Parent=Msa1208570-mRNA-1 |
| chr8_1 | CDS | 66758154 | 66758414 | 66758154 | ID=Msa1208570-mRNA-1:cds;Parent=Msa1208570-mRNA-1 |
| Gene Sequence |
| Protein sequence |
