AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1211900

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1211900 MtrunA17_Chr4g0060741 88.601 193 11 2 1 182 1 193 1.71e-117 333
Msa1211900 MtrunA17_Chr3g0092161 51.759 199 79 3 1 182 1 199 5.40e-60 187
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1211900 AT5G62440.1 66.129 124 36 2 51 174 53 170 7.65e-53 169

Find 55 sgRNAs with CRISPR-Local

Find 395 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCATCAGGTCCTGTGAAAT+TGG 0.210319 8_1:-71667652 Msa1211900:CDS
GCAAGTGTTTCTTTCTCATT+AGG 0.216772 8_1:-71666032 Msa1211900:CDS
ATGTCTACAGCGACGATTTC+TGG 0.267784 8_1:+71667825 None:intergenic
CAAAACTTTCGGCTCTTCTT+TGG 0.271810 8_1:-71667625 Msa1211900:CDS
TGTTTCACTTGCATTGCTTC+TGG 0.296516 8_1:+71665949 None:intergenic
AACAGAGCATTGGGTGGTTC+TGG 0.319267 8_1:-71665919 Msa1211900:CDS
CAAGTGTTTCTTTCTCATTA+GGG 0.357081 8_1:-71666031 Msa1211900:CDS
GCCAGAGATGACGACGAAAA+AGG 0.358142 8_1:-71667726 Msa1211900:CDS
ATCTCTGGCACGCTTCTGAT+TGG 0.363015 8_1:+71667740 None:intergenic
CACTCACTGCACTCAATGTC+TGG 0.374977 8_1:+71665831 None:intergenic
AAATTGGGTTACAAAACTTT+CGG 0.375837 8_1:-71667636 Msa1211900:CDS
ATGTAGGATGCTTGCGAACT+TGG 0.378769 8_1:+71666061 None:intergenic
GAATATGATCCACACATTTA+CGG 0.416271 8_1:+71665980 None:intergenic
CATCGAGGTGCTGGTGGAAG+AGG 0.436207 8_1:-71665886 Msa1211900:CDS
CCATCAGGTCCTGTGAAATT+GGG 0.448379 8_1:-71667651 Msa1211900:CDS
CACTTGCATTGCTTCTGGCA+AGG 0.456631 8_1:+71665954 None:intergenic
TGAGTGATTACTGCTGATCT+TGG 0.461222 8_1:-71665814 Msa1211900:three_prime_UTR
CATGATGCAAACAGAGCATT+GGG 0.462963 8_1:-71665928 Msa1211900:CDS
ACCTTGTTAACATTAAGATT+AGG 0.475911 8_1:+71667561 None:intergenic
ACTTGCATTGCTTCTGGCAA+GGG 0.488485 8_1:+71665955 None:intergenic
ACAGCGACGATTTCTGGTTC+CGG 0.491379 8_1:+71667831 None:intergenic
CCCAATTTCACAGGACCTGA+TGG 0.504047 8_1:+71667651 None:intergenic
AAAAGAAAGCATCGAGGTGC+TGG 0.509151 8_1:-71665895 Msa1211900:CDS
TTACTAGAATTGCTTATGAA+AGG 0.517998 8_1:-71666129 Msa1211900:CDS
GAAGAAGAGATGAAACCATC+AGG 0.518223 8_1:-71667666 Msa1211900:CDS
AATGACGGAAACCGCTGCAC+CGG 0.523742 8_1:-71667850 Msa1211900:CDS
GCAAAAGGTGGAAGCAGAGG+TGG 0.532733 8_1:-71667691 Msa1211900:CDS
AGGTGTTTCCAAGAAGCAAA+AGG 0.542393 8_1:-71667706 Msa1211900:CDS
ATACTACATCTACTAGTAGC+AGG 0.543266 8_1:+71665732 None:intergenic
AAGTTCGCAAGCATCCTACA+TGG 0.544290 8_1:-71666059 Msa1211900:CDS
ACATGATGCAAACAGAGCAT+TGG 0.559557 8_1:-71665929 Msa1211900:CDS
GAAGCAAAAGGTGGAAGCAG+AGG 0.563614 8_1:-71667694 Msa1211900:CDS
CGAGGTGCTGGTGGAAGAGG+AGG 0.573526 8_1:-71665883 Msa1211900:CDS
AACAAAATACAGAAAAGTCT+AGG 0.576361 8_1:+71665570 None:intergenic
TCCTAATCTTAATGTTAACA+AGG 0.576772 8_1:-71667562 Msa1211900:intron
AGGAGGTACACATGGACGTG+GGG 0.584945 8_1:-71665866 Msa1211900:CDS
TATTGAAAACGCTGAACTCG+CGG 0.587289 8_1:-71667799 Msa1211900:CDS
GTGTTTCTTTCTCATTAGGG+AGG 0.599803 8_1:-71666028 Msa1211900:CDS
GAGGAGGTACACATGGACGT+GGG 0.602359 8_1:-71665867 Msa1211900:CDS
GATTTCTGGTTCCGGTGCAG+CGG 0.603810 8_1:+71667839 None:intergenic
AGAAATCGTCGCTGTAGACA+TGG 0.605806 8_1:-71667823 Msa1211900:CDS
CAGGAAACATGAAACAAGCT+CGG 0.613319 8_1:+71665751 None:intergenic
TTCGAATGTGAGAGAGACTG+AGG 0.621482 8_1:+71667877 None:intergenic
AGAAAGCATCGAGGTGCTGG+TGG 0.622028 8_1:-71665892 Msa1211900:CDS
AGAGGAGGTACACATGGACG+TGG 0.625090 8_1:-71665868 Msa1211900:CDS
ATGTGAGAGAGACTGAGGGA+GGG 0.647855 8_1:+71667882 None:intergenic
GGAGGTACACATGGACGTGG+GGG 0.649144 8_1:-71665865 Msa1211900:CDS
TGTTTCCAAGAAGCAAAAGG+TGG 0.653047 8_1:-71667703 Msa1211900:CDS
AATGTGAGAGAGACTGAGGG+AGG 0.658113 8_1:+71667881 None:intergenic
GGTGGAAGAGGAGGTACACA+TGG 0.663515 8_1:-71665874 Msa1211900:CDS
TCGAATGTGAGAGAGACTGA+GGG 0.667603 8_1:+71667878 None:intergenic
GATGCAAACAGAGCATTGGG+TGG 0.682793 8_1:-71665925 Msa1211900:CDS
TGAAAACGCTGAACTCGCGG+AGG 0.694646 8_1:-71667796 Msa1211900:CDS
TGAACTCGCGGAGGTTAACG+CGG 0.696148 8_1:-71667787 Msa1211900:CDS
TCTGGTAAAAGAAAGCATCG+AGG 0.799067 8_1:-71665901 Msa1211900:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAGAATATCTTATTA+CGG - chr8_1:71665938-71665957 Msa1211900:CDS 10.0%
!! AAAAAAAGAATATCTTATTA+CGG - chr8_1:71665938-71665957 Msa1211900:CDS 10.0%
!! AAATCTCAATTTACAAATTA+GGG + chr8_1:71667049-71667068 None:intergenic 15.0%
!! GTTAGTAACAAAAAAATATT+AGG + chr8_1:71667151-71667170 None:intergenic 15.0%
!!! AATATTTTTTTGTTACTAAC+TGG - chr8_1:71667151-71667170 Msa1211900:intron 15.0%
!!! ATATTTTTTTGTTACTAACT+GGG - chr8_1:71667152-71667171 Msa1211900:intron 15.0%
!!! TAATTCTTTTTGTAAAAAAG+AGG - chr8_1:71667852-71667871 Msa1211900:CDS 15.0%
!! AAATCTCAATTTACAAATTA+GGG + chr8_1:71667049-71667068 None:intergenic 15.0%
!! GTTAGTAACAAAAAAATATT+AGG + chr8_1:71667151-71667170 None:intergenic 15.0%
!!! AATATTTTTTTGTTACTAAC+TGG - chr8_1:71667151-71667170 Msa1211900:intron 15.0%
!!! ATATTTTTTTGTTACTAACT+GGG - chr8_1:71667152-71667171 Msa1211900:intron 15.0%
!!! TAATTCTTTTTGTAAAAAAG+AGG - chr8_1:71667852-71667871 Msa1211900:CDS 15.0%
!! CAACTAAAAAATTGTATTGA+AGG - chr8_1:71666564-71666583 Msa1211900:intron 20.0%
!! TAAAAAATTGTATTGAAGGA+GGG - chr8_1:71666568-71666587 Msa1211900:intron 20.0%
!! GAAATCTCAATTTACAAATT+AGG + chr8_1:71667050-71667069 None:intergenic 20.0%
!!! TTTGACTTTTTTATTTCATG+TGG - chr8_1:71667652-71667671 Msa1211900:CDS 20.0%
!!! TCTATTTTGTATTATCACAA+CGG - chr8_1:71667883-71667902 Msa1211900:five_prime_UTR 20.0%
!! CAACTAAAAAATTGTATTGA+AGG - chr8_1:71666564-71666583 Msa1211900:intron 20.0%
!! TAAAAAATTGTATTGAAGGA+GGG - chr8_1:71666568-71666587 Msa1211900:intron 20.0%
!! GAAATCTCAATTTACAAATT+AGG + chr8_1:71667050-71667069 None:intergenic 20.0%
!!! TTTGACTTTTTTATTTCATG+TGG - chr8_1:71667652-71667671 Msa1211900:CDS 20.0%
!!! TCTATTTTGTATTATCACAA+CGG - chr8_1:71667883-71667902 Msa1211900:five_prime_UTR 20.0%
! AAATTGGGTTACAAAACTTT+CGG - chr8_1:71665710-71665729 Msa1211900:three_prime_UTR 25.0%
! TCCTAATCTTAATGTTAACA+AGG - chr8_1:71665784-71665803 Msa1211900:three_prime_UTR 25.0%
! ACCTTGTTAACATTAAGATT+AGG + chr8_1:71665788-71665807 None:intergenic 25.0%
! ACATCAAAATGTCAAATCAA+GGG + chr8_1:71665852-71665871 None:intergenic 25.0%
! CCAACATCAATACAAAATAA+GGG + chr8_1:71665966-71665985 None:intergenic 25.0%
! ACCAACATCAATACAAAATA+AGG + chr8_1:71665967-71665986 None:intergenic 25.0%
!!! TTTTGTATTGATGTTGGTTA+TGG - chr8_1:71665969-71665988 Msa1211900:CDS 25.0%
!! TTTGTATTGATGTTGGTTAT+GGG - chr8_1:71665970-71665989 Msa1211900:CDS 25.0%
!!! TTTAGTAGTGTTGATGTAAA+GGG - chr8_1:71666103-71666122 Msa1211900:CDS 25.0%
! ATAATGTTACTGATCTTTCA+AGG - chr8_1:71666158-71666177 Msa1211900:intron 25.0%
!! GTTTTGTACAATGAAGAAAA+AGG + chr8_1:71666529-71666548 None:intergenic 25.0%
!!! TTTTTTAGTTGCTTCAAATG+AGG + chr8_1:71666555-71666574 None:intergenic 25.0%
! CTAAAAAATTGTATTGAAGG+AGG - chr8_1:71666567-71666586 Msa1211900:intron 25.0%
!!! TTTTTTGTGATTGCTTTGAT+TGG - chr8_1:71666689-71666708 Msa1211900:intron 25.0%
!! TTTTTGTGATTGCTTTGATT+GGG - chr8_1:71666690-71666709 Msa1211900:intron 25.0%
! GAAACGCTAAAAACAAAATA+AGG + chr8_1:71666800-71666819 None:intergenic 25.0%
! TTACTAGAATTGCTTATGAA+AGG - chr8_1:71667217-71667236 Msa1211900:intron 25.0%
!!! ATAATTTTAGCAAAGGATCA+GGG + chr8_1:71667689-71667708 None:intergenic 25.0%
!!! TGAAGACATAATTTTAGCAA+AGG + chr8_1:71667696-71667715 None:intergenic 25.0%
! AACAAAATACAGAAAAGTCT+AGG + chr8_1:71667779-71667798 None:intergenic 25.0%
! AAATTGGGTTACAAAACTTT+CGG - chr8_1:71665710-71665729 Msa1211900:three_prime_UTR 25.0%
! TCCTAATCTTAATGTTAACA+AGG - chr8_1:71665784-71665803 Msa1211900:three_prime_UTR 25.0%
! ACCTTGTTAACATTAAGATT+AGG + chr8_1:71665788-71665807 None:intergenic 25.0%
! ACATCAAAATGTCAAATCAA+GGG + chr8_1:71665852-71665871 None:intergenic 25.0%
! CCAACATCAATACAAAATAA+GGG + chr8_1:71665966-71665985 None:intergenic 25.0%
! ACCAACATCAATACAAAATA+AGG + chr8_1:71665967-71665986 None:intergenic 25.0%
!!! TTTTGTATTGATGTTGGTTA+TGG - chr8_1:71665969-71665988 Msa1211900:CDS 25.0%
!! TTTGTATTGATGTTGGTTAT+GGG - chr8_1:71665970-71665989 Msa1211900:CDS 25.0%
!!! TTTAGTAGTGTTGATGTAAA+GGG - chr8_1:71666103-71666122 Msa1211900:CDS 25.0%
! ATAATGTTACTGATCTTTCA+AGG - chr8_1:71666158-71666177 Msa1211900:intron 25.0%
!! GTTTTGTACAATGAAGAAAA+AGG + chr8_1:71666529-71666548 None:intergenic 25.0%
!!! TTTTTTAGTTGCTTCAAATG+AGG + chr8_1:71666555-71666574 None:intergenic 25.0%
! CTAAAAAATTGTATTGAAGG+AGG - chr8_1:71666567-71666586 Msa1211900:intron 25.0%
!!! TTTTTTGTGATTGCTTTGAT+TGG - chr8_1:71666689-71666708 Msa1211900:intron 25.0%
!! TTTTTGTGATTGCTTTGATT+GGG - chr8_1:71666690-71666709 Msa1211900:intron 25.0%
! GAAACGCTAAAAACAAAATA+AGG + chr8_1:71666800-71666819 None:intergenic 25.0%
! TTACTAGAATTGCTTATGAA+AGG - chr8_1:71667217-71667236 Msa1211900:intron 25.0%
!!! ATAATTTTAGCAAAGGATCA+GGG + chr8_1:71667689-71667708 None:intergenic 25.0%
!!! TGAAGACATAATTTTAGCAA+AGG + chr8_1:71667696-71667715 None:intergenic 25.0%
! AACAAAATACAGAAAAGTCT+AGG + chr8_1:71667779-71667798 None:intergenic 25.0%
TCACATTCGAACAAAAATGA+CGG - chr8_1:71665481-71665500 Msa1211900:three_prime_UTR 30.0%
CACATCAAAATGTCAAATCA+AGG + chr8_1:71665853-71665872 None:intergenic 30.0%
!!! CCCTTATTTTGTATTGATGT+TGG - chr8_1:71665963-71665982 Msa1211900:CDS 30.0%
!! CTTTAGTAGTGTTGATGTAA+AGG - chr8_1:71666102-71666121 Msa1211900:CDS 30.0%
!! TTAGTAGTGTTGATGTAAAG+GGG - chr8_1:71666104-71666123 Msa1211900:CDS 30.0%
TTGCATATTTGTGAATTGGA+TGG - chr8_1:71666127-71666146 Msa1211900:CDS 30.0%
TGCATATTTGTGAATTGGAT+GGG - chr8_1:71666128-71666147 Msa1211900:CDS 30.0%
ATTACAAAGCCTAAAATGAG+AGG - chr8_1:71666716-71666735 Msa1211900:intron 30.0%
AGAGAATTTGAATATTCCAC+AGG - chr8_1:71666924-71666943 Msa1211900:intron 30.0%
GAGAATTTGAATATTCCACA+GGG - chr8_1:71666925-71666944 Msa1211900:intron 30.0%
CACTTATATATCTACATGTC+AGG - chr8_1:71666993-71667012 Msa1211900:intron 30.0%
!! TGACTTTTGGTTGTTTTATG+TGG - chr8_1:71667176-71667195 Msa1211900:intron 30.0%
! TTTCCACCAATCTTTTTATC+AGG + chr8_1:71667253-71667272 None:intergenic 30.0%
CAAGTGTTTCTTTCTCATTA+GGG - chr8_1:71667315-71667334 Msa1211900:intron 30.0%
GAATATGATCCACACATTTA+CGG + chr8_1:71667369-71667388 None:intergenic 30.0%
!! CATAATTTTAGCAAAGGATC+AGG + chr8_1:71667690-71667709 None:intergenic 30.0%
TCACATTCGAACAAAAATGA+CGG - chr8_1:71665481-71665500 Msa1211900:three_prime_UTR 30.0%
CACATCAAAATGTCAAATCA+AGG + chr8_1:71665853-71665872 None:intergenic 30.0%
!!! CCCTTATTTTGTATTGATGT+TGG - chr8_1:71665963-71665982 Msa1211900:CDS 30.0%
!! CTTTAGTAGTGTTGATGTAA+AGG - chr8_1:71666102-71666121 Msa1211900:CDS 30.0%
!! TTAGTAGTGTTGATGTAAAG+GGG - chr8_1:71666104-71666123 Msa1211900:CDS 30.0%
TTGCATATTTGTGAATTGGA+TGG - chr8_1:71666127-71666146 Msa1211900:CDS 30.0%
TGCATATTTGTGAATTGGAT+GGG - chr8_1:71666128-71666147 Msa1211900:CDS 30.0%
ATTACAAAGCCTAAAATGAG+AGG - chr8_1:71666716-71666735 Msa1211900:intron 30.0%
AGAGAATTTGAATATTCCAC+AGG - chr8_1:71666924-71666943 Msa1211900:intron 30.0%
GAGAATTTGAATATTCCACA+GGG - chr8_1:71666925-71666944 Msa1211900:intron 30.0%
CACTTATATATCTACATGTC+AGG - chr8_1:71666993-71667012 Msa1211900:intron 30.0%
!! TGACTTTTGGTTGTTTTATG+TGG - chr8_1:71667176-71667195 Msa1211900:intron 30.0%
! TTTCCACCAATCTTTTTATC+AGG + chr8_1:71667253-71667272 None:intergenic 30.0%
CAAGTGTTTCTTTCTCATTA+GGG - chr8_1:71667315-71667334 Msa1211900:intron 30.0%
GAATATGATCCACACATTTA+CGG + chr8_1:71667369-71667388 None:intergenic 30.0%
!! CATAATTTTAGCAAAGGATC+AGG + chr8_1:71667690-71667709 None:intergenic 30.0%
! GTTTTGTAACCCAATTTCAC+AGG + chr8_1:71665707-71665726 None:intergenic 35.0%
! TCAACAGTTTTCTTCATGCT+TGG - chr8_1:71665759-71665778 Msa1211900:three_prime_UTR 35.0%
! CAACAGTTTTCTTCATGCTT+GGG - chr8_1:71665760-71665779 Msa1211900:three_prime_UTR 35.0%
! AACAGTTTTCTTCATGCTTG+GGG - chr8_1:71665761-71665780 Msa1211900:three_prime_UTR 35.0%
ACTCGCAATCAAAGTCTAAA+AGG + chr8_1:71666250-71666269 None:intergenic 35.0%
TTAGACTTTGATTGCGAGTT+TGG - chr8_1:71666251-71666270 Msa1211900:intron 35.0%
AAACTCACAAACAAAGCCTT+GGG + chr8_1:71666426-71666445 None:intergenic 35.0%
ATGGAAGAAATAGAGGAGAT+TGG - chr8_1:71666482-71666501 Msa1211900:intron 35.0%
TGGAAGAAATAGAGGAGATT+GGG - chr8_1:71666483-71666502 Msa1211900:intron 35.0%
! TAAAATGAGAGGAAGCACAT+GGG - chr8_1:71666727-71666746 Msa1211900:intron 35.0%
TTTAGCGTTTCCATGAATTG+AGG - chr8_1:71666809-71666828 Msa1211900:intron 35.0%
TTAGCGTTTCCATGAATTGA+GGG - chr8_1:71666810-71666829 Msa1211900:intron 35.0%
! TTTCCATGAATTGAGGGTTT+TGG - chr8_1:71666816-71666835 Msa1211900:intron 35.0%
ATTAATCCAACATCTGACCT+TGG - chr8_1:71666878-71666897 Msa1211900:intron 35.0%
ATCTACATGTCAGGATTGAA+CGG - chr8_1:71667002-71667021 Msa1211900:intron 35.0%
! TTACTAACTGGGATGACTTT+TGG - chr8_1:71667163-71667182 Msa1211900:intron 35.0%
!! AAACACTTGCTTTTCCATGT+AGG + chr8_1:71667304-71667323 None:intergenic 35.0%
GCAAGTGTTTCTTTCTCATT+AGG - chr8_1:71667314-71667333 Msa1211900:intron 35.0%
!!! TTTTAGCTTCCGTAAATGTG+TGG - chr8_1:71667357-71667376 Msa1211900:intron 35.0%
ATACTACATCTACTAGTAGC+AGG + chr8_1:71667617-71667636 None:intergenic 35.0%
! GTTTTGTAACCCAATTTCAC+AGG + chr8_1:71665707-71665726 None:intergenic 35.0%
! TCAACAGTTTTCTTCATGCT+TGG - chr8_1:71665759-71665778 Msa1211900:three_prime_UTR 35.0%
! CAACAGTTTTCTTCATGCTT+GGG - chr8_1:71665760-71665779 Msa1211900:three_prime_UTR 35.0%
! AACAGTTTTCTTCATGCTTG+GGG - chr8_1:71665761-71665780 Msa1211900:three_prime_UTR 35.0%
ACTCGCAATCAAAGTCTAAA+AGG + chr8_1:71666250-71666269 None:intergenic 35.0%
TTAGACTTTGATTGCGAGTT+TGG - chr8_1:71666251-71666270 Msa1211900:intron 35.0%
AAACTCACAAACAAAGCCTT+GGG + chr8_1:71666426-71666445 None:intergenic 35.0%
ATGGAAGAAATAGAGGAGAT+TGG - chr8_1:71666482-71666501 Msa1211900:intron 35.0%
TGGAAGAAATAGAGGAGATT+GGG - chr8_1:71666483-71666502 Msa1211900:intron 35.0%
! TAAAATGAGAGGAAGCACAT+GGG - chr8_1:71666727-71666746 Msa1211900:intron 35.0%
TTTAGCGTTTCCATGAATTG+AGG - chr8_1:71666809-71666828 Msa1211900:intron 35.0%
TTAGCGTTTCCATGAATTGA+GGG - chr8_1:71666810-71666829 Msa1211900:intron 35.0%
! TTTCCATGAATTGAGGGTTT+TGG - chr8_1:71666816-71666835 Msa1211900:intron 35.0%
ATTAATCCAACATCTGACCT+TGG - chr8_1:71666878-71666897 Msa1211900:intron 35.0%
ATCTACATGTCAGGATTGAA+CGG - chr8_1:71667002-71667021 Msa1211900:intron 35.0%
! TTACTAACTGGGATGACTTT+TGG - chr8_1:71667163-71667182 Msa1211900:intron 35.0%
!! AAACACTTGCTTTTCCATGT+AGG + chr8_1:71667304-71667323 None:intergenic 35.0%
GCAAGTGTTTCTTTCTCATT+AGG - chr8_1:71667314-71667333 Msa1211900:intron 35.0%
!!! TTTTAGCTTCCGTAAATGTG+TGG - chr8_1:71667357-71667376 Msa1211900:intron 35.0%
ATACTACATCTACTAGTAGC+AGG + chr8_1:71667617-71667636 None:intergenic 35.0%
TATTGAAAACGCTGAACTCG+CGG - chr8_1:71665547-71665566 Msa1211900:three_prime_UTR 40.0%
AGGTGTTTCCAAGAAGCAAA+AGG - chr8_1:71665640-71665659 Msa1211900:three_prime_UTR 40.0%
TGTTTCCAAGAAGCAAAAGG+TGG - chr8_1:71665643-71665662 Msa1211900:three_prime_UTR 40.0%
GAAGAAGAGATGAAACCATC+AGG - chr8_1:71665680-71665699 Msa1211900:three_prime_UTR 40.0%
CAAAACTTTCGGCTCTTCTT+TGG - chr8_1:71665721-71665740 Msa1211900:three_prime_UTR 40.0%
TTTCCGAACAAAACAGAGCA+CGG + chr8_1:71666008-71666027 None:intergenic 40.0%
GAGATTCAGAGTTCAACTCT+TGG - chr8_1:71666069-71666088 Msa1211900:CDS 40.0%
GGGGTTGCATATTTGTGAAT+TGG - chr8_1:71666123-71666142 Msa1211900:CDS 40.0%
!!! TTCAAGGCTGTGTTTTGAAG+AGG - chr8_1:71666174-71666193 Msa1211900:intron 40.0%
ACTTTGATTGCGAGTTTGGA+GGG - chr8_1:71666255-71666274 Msa1211900:intron 40.0%
!! AGAATCCCTCACTTTTATCG+GGG + chr8_1:71666344-71666363 None:intergenic 40.0%
!! GAGAATCCCTCACTTTTATC+GGG + chr8_1:71666345-71666364 None:intergenic 40.0%
!! GGAGAATCCCTCACTTTTAT+CGG + chr8_1:71666346-71666365 None:intergenic 40.0%
CAAACTCACAAACAAAGCCT+TGG + chr8_1:71666427-71666446 None:intergenic 40.0%
!! CAAGGCTTTGTTTGTGAGTT+TGG - chr8_1:71666425-71666444 Msa1211900:intron 40.0%
!! GCTTTGTTTGTGAGTTTGGA+GGG - chr8_1:71666429-71666448 Msa1211900:intron 40.0%
TTTGTGAGTTTGGAGGGTAA+GGG - chr8_1:71666435-71666454 Msa1211900:intron 40.0%
TTTGAAAAGGAAGGGGCAAA+TGG - chr8_1:71666463-71666482 Msa1211900:intron 40.0%
AAGAAATAGAGGAGATTGGG+AGG - chr8_1:71666486-71666505 Msa1211900:intron 40.0%
AGAAATAGAGGAGATTGGGA+GGG - chr8_1:71666487-71666506 Msa1211900:intron 40.0%
!! GTATTGAAGGAGGGTTTTGA+CGG - chr8_1:71666577-71666596 Msa1211900:intron 40.0%
!! TATTGAAGGAGGGTTTTGAC+GGG - chr8_1:71666578-71666597 Msa1211900:intron 40.0%
! CATGTGCTTCCTCTCATTTT+AGG + chr8_1:71666728-71666747 None:intergenic 40.0%
! CTAAAATGAGAGGAAGCACA+TGG - chr8_1:71666726-71666745 Msa1211900:intron 40.0%
AGTCCAAAACCCTCAATTCA+TGG + chr8_1:71666822-71666841 None:intergenic 40.0%
TCTACATGTCAGGATTGAAC+GGG - chr8_1:71667003-71667022 Msa1211900:intron 40.0%
! CCAATCTTTTTATCAGGCTC+TGG + chr8_1:71667247-71667266 None:intergenic 40.0%
CCAGAGCCTGATAAAAAGAT+TGG - chr8_1:71667244-71667263 Msa1211900:intron 40.0%
GAGCCTGATAAAAAGATTGG+TGG - chr8_1:71667247-71667266 Msa1211900:intron 40.0%
GTGTTTCTTTCTCATTAGGG+AGG - chr8_1:71667318-71667337 Msa1211900:intron 40.0%
TGTTTCACTTGCATTGCTTC+TGG + chr8_1:71667400-71667419 None:intergenic 40.0%
ACATGATGCAAACAGAGCAT+TGG - chr8_1:71667417-71667436 Msa1211900:intron 40.0%
! CATGATGCAAACAGAGCATT+GGG - chr8_1:71667418-71667437 Msa1211900:intron 40.0%
!! TCTGGTAAAAGAAAGCATCG+AGG - chr8_1:71667445-71667464 Msa1211900:intron 40.0%
TGAGTGATTACTGCTGATCT+TGG - chr8_1:71667532-71667551 Msa1211900:intron 40.0%
CAGGAAACATGAAACAAGCT+CGG + chr8_1:71667598-71667617 None:intergenic 40.0%
TATTGAAAACGCTGAACTCG+CGG - chr8_1:71665547-71665566 Msa1211900:three_prime_UTR 40.0%
AGGTGTTTCCAAGAAGCAAA+AGG - chr8_1:71665640-71665659 Msa1211900:three_prime_UTR 40.0%
TGTTTCCAAGAAGCAAAAGG+TGG - chr8_1:71665643-71665662 Msa1211900:three_prime_UTR 40.0%
GAAGAAGAGATGAAACCATC+AGG - chr8_1:71665680-71665699 Msa1211900:three_prime_UTR 40.0%
CAAAACTTTCGGCTCTTCTT+TGG - chr8_1:71665721-71665740 Msa1211900:three_prime_UTR 40.0%
TTTCCGAACAAAACAGAGCA+CGG + chr8_1:71666008-71666027 None:intergenic 40.0%
GAGATTCAGAGTTCAACTCT+TGG - chr8_1:71666069-71666088 Msa1211900:CDS 40.0%
GGGGTTGCATATTTGTGAAT+TGG - chr8_1:71666123-71666142 Msa1211900:CDS 40.0%
!!! TTCAAGGCTGTGTTTTGAAG+AGG - chr8_1:71666174-71666193 Msa1211900:intron 40.0%
ACTTTGATTGCGAGTTTGGA+GGG - chr8_1:71666255-71666274 Msa1211900:intron 40.0%
!! AGAATCCCTCACTTTTATCG+GGG + chr8_1:71666344-71666363 None:intergenic 40.0%
!! GAGAATCCCTCACTTTTATC+GGG + chr8_1:71666345-71666364 None:intergenic 40.0%
!! GGAGAATCCCTCACTTTTAT+CGG + chr8_1:71666346-71666365 None:intergenic 40.0%
CAAACTCACAAACAAAGCCT+TGG + chr8_1:71666427-71666446 None:intergenic 40.0%
!! CAAGGCTTTGTTTGTGAGTT+TGG - chr8_1:71666425-71666444 Msa1211900:intron 40.0%
!! GCTTTGTTTGTGAGTTTGGA+GGG - chr8_1:71666429-71666448 Msa1211900:intron 40.0%
TTTGTGAGTTTGGAGGGTAA+GGG - chr8_1:71666435-71666454 Msa1211900:intron 40.0%
TTTGAAAAGGAAGGGGCAAA+TGG - chr8_1:71666463-71666482 Msa1211900:intron 40.0%
AAGAAATAGAGGAGATTGGG+AGG - chr8_1:71666486-71666505 Msa1211900:intron 40.0%
AGAAATAGAGGAGATTGGGA+GGG - chr8_1:71666487-71666506 Msa1211900:intron 40.0%
!! GTATTGAAGGAGGGTTTTGA+CGG - chr8_1:71666577-71666596 Msa1211900:intron 40.0%
!! TATTGAAGGAGGGTTTTGAC+GGG - chr8_1:71666578-71666597 Msa1211900:intron 40.0%
! CATGTGCTTCCTCTCATTTT+AGG + chr8_1:71666728-71666747 None:intergenic 40.0%
! CTAAAATGAGAGGAAGCACA+TGG - chr8_1:71666726-71666745 Msa1211900:intron 40.0%
AGTCCAAAACCCTCAATTCA+TGG + chr8_1:71666822-71666841 None:intergenic 40.0%
TCTACATGTCAGGATTGAAC+GGG - chr8_1:71667003-71667022 Msa1211900:intron 40.0%
! CCAATCTTTTTATCAGGCTC+TGG + chr8_1:71667247-71667266 None:intergenic 40.0%
CCAGAGCCTGATAAAAAGAT+TGG - chr8_1:71667244-71667263 Msa1211900:intron 40.0%
GAGCCTGATAAAAAGATTGG+TGG - chr8_1:71667247-71667266 Msa1211900:intron 40.0%
GTGTTTCTTTCTCATTAGGG+AGG - chr8_1:71667318-71667337 Msa1211900:intron 40.0%
TGTTTCACTTGCATTGCTTC+TGG + chr8_1:71667400-71667419 None:intergenic 40.0%
ACATGATGCAAACAGAGCAT+TGG - chr8_1:71667417-71667436 Msa1211900:intron 40.0%
! CATGATGCAAACAGAGCATT+GGG - chr8_1:71667418-71667437 Msa1211900:intron 40.0%
!! TCTGGTAAAAGAAAGCATCG+AGG - chr8_1:71667445-71667464 Msa1211900:intron 40.0%
TGAGTGATTACTGCTGATCT+TGG - chr8_1:71667532-71667551 Msa1211900:intron 40.0%
CAGGAAACATGAAACAAGCT+CGG + chr8_1:71667598-71667617 None:intergenic 40.0%
TCGAATGTGAGAGAGACTGA+GGG + chr8_1:71665471-71665490 None:intergenic 45.0%
TTCGAATGTGAGAGAGACTG+AGG + chr8_1:71665472-71665491 None:intergenic 45.0%
ATGTCTACAGCGACGATTTC+TGG + chr8_1:71665524-71665543 None:intergenic 45.0%
AGAAATCGTCGCTGTAGACA+TGG - chr8_1:71665523-71665542 Msa1211900:three_prime_UTR 45.0%
!! ACCTTTTTCGTCGTCATCTC+TGG + chr8_1:71665624-71665643 None:intergenic 45.0%
! TGCTTCCACCTTTTGCTTCT+TGG + chr8_1:71665651-71665670 None:intergenic 45.0%
ACCATCAGGTCCTGTGAAAT+TGG - chr8_1:71665694-71665713 Msa1211900:three_prime_UTR 45.0%
CCATCAGGTCCTGTGAAATT+GGG - chr8_1:71665695-71665714 Msa1211900:three_prime_UTR 45.0%
!! ACTCCGTGCTCTGTTTTGTT+CGG - chr8_1:71666002-71666021 Msa1211900:CDS 45.0%
!!! AGGCTGTGTTTTGAAGAGGA+AGG - chr8_1:71666178-71666197 Msa1211900:intron 45.0%
!!! GGCTGTGTTTTGAAGAGGAA+GGG - chr8_1:71666179-71666198 Msa1211900:intron 45.0%
!!! GCTGTGTTTTGAAGAGGAAG+GGG - chr8_1:71666180-71666199 Msa1211900:intron 45.0%
!!! CTGTGTTTTGAAGAGGAAGG+GGG - chr8_1:71666181-71666200 Msa1211900:intron 45.0%
!! TTTTGAAGAGGAAGGGGGTT+AGG - chr8_1:71666186-71666205 Msa1211900:intron 45.0%
GACTTTGATTGCGAGTTTGG+AGG - chr8_1:71666254-71666273 Msa1211900:intron 45.0%
!! AAAGCGAGATGAGGGCATTA+AGG - chr8_1:71666278-71666297 Msa1211900:intron 45.0%
!! AAGCGAGATGAGGGCATTAA+GGG - chr8_1:71666279-71666298 Msa1211900:intron 45.0%
!! GATGAGGGCATTAAGGGTAA+AGG - chr8_1:71666285-71666304 Msa1211900:intron 45.0%
GGGCATTAAGGGTAAAGGAT+AGG - chr8_1:71666290-71666309 Msa1211900:intron 45.0%
AGACTCCCCGATAAAAGTGA+GGG - chr8_1:71666336-71666355 Msa1211900:intron 45.0%
AAGGGGCGAAAAGGAAACAT+AGG + chr8_1:71666367-71666386 None:intergenic 45.0%
CAAACAAAGCCTTGGGAGTT+AGG + chr8_1:71666419-71666438 None:intergenic 45.0%
!! GGCTTTGTTTGTGAGTTTGG+AGG - chr8_1:71666428-71666447 Msa1211900:intron 45.0%
GTTTGTGAGTTTGGAGGGTA+AGG - chr8_1:71666434-71666453 Msa1211900:intron 45.0%
TTGTGAGTTTGGAGGGTAAG+GGG - chr8_1:71666436-71666455 Msa1211900:intron 45.0%
GGGGCAAATGGAAGAAATAG+AGG - chr8_1:71666475-71666494 Msa1211900:intron 45.0%
GAAATAGAGGAGATTGGGAG+GGG - chr8_1:71666488-71666507 Msa1211900:intron 45.0%
ATTCCACAGGGACTGTGATA+TGG - chr8_1:71666937-71666956 Msa1211900:intron 45.0%
AAACCATATCACAGTCCCTG+TGG + chr8_1:71666943-71666962 None:intergenic 45.0%
ATGTAGGATGCTTGCGAACT+TGG + chr8_1:71667288-71667307 None:intergenic 45.0%
AAGTTCGCAAGCATCCTACA+TGG - chr8_1:71667287-71667306 Msa1211900:intron 45.0%
ACTTGCATTGCTTCTGGCAA+GGG + chr8_1:71667394-71667413 None:intergenic 45.0%
!! AAAAGAAAGCATCGAGGTGC+TGG - chr8_1:71667451-71667470 Msa1211900:intron 45.0%
TCGAATGTGAGAGAGACTGA+GGG + chr8_1:71665471-71665490 None:intergenic 45.0%
TTCGAATGTGAGAGAGACTG+AGG + chr8_1:71665472-71665491 None:intergenic 45.0%
ATGTCTACAGCGACGATTTC+TGG + chr8_1:71665524-71665543 None:intergenic 45.0%
AGAAATCGTCGCTGTAGACA+TGG - chr8_1:71665523-71665542 Msa1211900:three_prime_UTR 45.0%
!! ACCTTTTTCGTCGTCATCTC+TGG + chr8_1:71665624-71665643 None:intergenic 45.0%
! TGCTTCCACCTTTTGCTTCT+TGG + chr8_1:71665651-71665670 None:intergenic 45.0%
ACCATCAGGTCCTGTGAAAT+TGG - chr8_1:71665694-71665713 Msa1211900:three_prime_UTR 45.0%
CCATCAGGTCCTGTGAAATT+GGG - chr8_1:71665695-71665714 Msa1211900:three_prime_UTR 45.0%
!! ACTCCGTGCTCTGTTTTGTT+CGG - chr8_1:71666002-71666021 Msa1211900:CDS 45.0%
!!! AGGCTGTGTTTTGAAGAGGA+AGG - chr8_1:71666178-71666197 Msa1211900:intron 45.0%
!!! GGCTGTGTTTTGAAGAGGAA+GGG - chr8_1:71666179-71666198 Msa1211900:intron 45.0%
!!! GCTGTGTTTTGAAGAGGAAG+GGG - chr8_1:71666180-71666199 Msa1211900:intron 45.0%
!!! CTGTGTTTTGAAGAGGAAGG+GGG - chr8_1:71666181-71666200 Msa1211900:intron 45.0%
!! TTTTGAAGAGGAAGGGGGTT+AGG - chr8_1:71666186-71666205 Msa1211900:intron 45.0%
GACTTTGATTGCGAGTTTGG+AGG - chr8_1:71666254-71666273 Msa1211900:intron 45.0%
!! AAAGCGAGATGAGGGCATTA+AGG - chr8_1:71666278-71666297 Msa1211900:intron 45.0%
!! AAGCGAGATGAGGGCATTAA+GGG - chr8_1:71666279-71666298 Msa1211900:intron 45.0%
!! GATGAGGGCATTAAGGGTAA+AGG - chr8_1:71666285-71666304 Msa1211900:intron 45.0%
GGGCATTAAGGGTAAAGGAT+AGG - chr8_1:71666290-71666309 Msa1211900:intron 45.0%
AGACTCCCCGATAAAAGTGA+GGG - chr8_1:71666336-71666355 Msa1211900:intron 45.0%
AAGGGGCGAAAAGGAAACAT+AGG + chr8_1:71666367-71666386 None:intergenic 45.0%
CAAACAAAGCCTTGGGAGTT+AGG + chr8_1:71666419-71666438 None:intergenic 45.0%
!! GGCTTTGTTTGTGAGTTTGG+AGG - chr8_1:71666428-71666447 Msa1211900:intron 45.0%
GTTTGTGAGTTTGGAGGGTA+AGG - chr8_1:71666434-71666453 Msa1211900:intron 45.0%
TTGTGAGTTTGGAGGGTAAG+GGG - chr8_1:71666436-71666455 Msa1211900:intron 45.0%
GGGGCAAATGGAAGAAATAG+AGG - chr8_1:71666475-71666494 Msa1211900:intron 45.0%
GAAATAGAGGAGATTGGGAG+GGG - chr8_1:71666488-71666507 Msa1211900:intron 45.0%
ATTCCACAGGGACTGTGATA+TGG - chr8_1:71666937-71666956 Msa1211900:intron 45.0%
AAACCATATCACAGTCCCTG+TGG + chr8_1:71666943-71666962 None:intergenic 45.0%
ATGTAGGATGCTTGCGAACT+TGG + chr8_1:71667288-71667307 None:intergenic 45.0%
AAGTTCGCAAGCATCCTACA+TGG - chr8_1:71667287-71667306 Msa1211900:intron 45.0%
ACTTGCATTGCTTCTGGCAA+GGG + chr8_1:71667394-71667413 None:intergenic 45.0%
!! AAAAGAAAGCATCGAGGTGC+TGG - chr8_1:71667451-71667470 Msa1211900:intron 45.0%
ATGTGAGAGAGACTGAGGGA+GGG + chr8_1:71665467-71665486 None:intergenic 50.0%
AATGTGAGAGAGACTGAGGG+AGG + chr8_1:71665468-71665487 None:intergenic 50.0%
!! ACAGCGACGATTTCTGGTTC+CGG + chr8_1:71665518-71665537 None:intergenic 50.0%
ATCTCTGGCACGCTTCTGAT+TGG + chr8_1:71665609-71665628 None:intergenic 50.0%
GCCAGAGATGACGACGAAAA+AGG - chr8_1:71665620-71665639 Msa1211900:three_prime_UTR 50.0%
GAAGCAAAAGGTGGAAGCAG+AGG - chr8_1:71665652-71665671 Msa1211900:three_prime_UTR 50.0%
CCCAATTTCACAGGACCTGA+TGG + chr8_1:71665698-71665717 None:intergenic 50.0%
TTTGGAGGGAAAGCGAGATG+AGG - chr8_1:71666269-71666288 Msa1211900:intron 50.0%
TTGGAGGGAAAGCGAGATGA+GGG - chr8_1:71666270-71666289 Msa1211900:intron 50.0%
GAGACTCCCCGATAAAAGTG+AGG - chr8_1:71666335-71666354 Msa1211900:intron 50.0%
TTTGGAGGAAAGGGGCGAAA+AGG + chr8_1:71666376-71666395 None:intergenic 50.0%
!! TGAGAGGGCTTTGGAGGAAA+GGG + chr8_1:71666385-71666404 None:intergenic 50.0%
!! ATGAGAGGGCTTTGGAGGAA+AGG + chr8_1:71666386-71666405 None:intergenic 50.0%
TAGGAGGGAAAGGGATGAGA+GGG + chr8_1:71666400-71666419 None:intergenic 50.0%
TTAGGAGGGAAAGGGATGAG+AGG + chr8_1:71666401-71666420 None:intergenic 50.0%
CTTGGGAGTTAGGAGGGAAA+GGG + chr8_1:71666409-71666428 None:intergenic 50.0%
CAAAGCCTTGGGAGTTAGGA+GGG + chr8_1:71666415-71666434 None:intergenic 50.0%
ACAAAGCCTTGGGAGTTAGG+AGG + chr8_1:71666416-71666435 None:intergenic 50.0%
TGTGAGTTTGGAGGGTAAGG+GGG - chr8_1:71666437-71666456 Msa1211900:intron 50.0%
! GGTAAGGGGGGACTTTGAAA+AGG - chr8_1:71666450-71666469 Msa1211900:intron 50.0%
! AGGGGGGACTTTGAAAAGGA+AGG - chr8_1:71666454-71666473 Msa1211900:intron 50.0%
! GGGGGGACTTTGAAAAGGAA+GGG - chr8_1:71666455-71666474 Msa1211900:intron 50.0%
! GGGGGACTTTGAAAAGGAAG+GGG - chr8_1:71666456-71666475 Msa1211900:intron 50.0%
!!! AGGAGGGTTTTGACGGGTTT+TGG - chr8_1:71666584-71666603 Msa1211900:intron 50.0%
!!! AGGGTTTTGACGGGTTTTGG+AGG - chr8_1:71666587-71666606 Msa1211900:intron 50.0%
!!! GGGTTTTGACGGGTTTTGGA+GGG - chr8_1:71666588-71666607 Msa1211900:intron 50.0%
TCCAACATCTGACCTTGGAC+TGG - chr8_1:71666883-71666902 Msa1211900:intron 50.0%
TCCAGTCCAAGGTCAGATGT+TGG + chr8_1:71666887-71666906 None:intergenic 50.0%
! TTGGACTGGATTGAGCTGCA+GGG - chr8_1:71666897-71666916 Msa1211900:intron 50.0%
CACTTGCATTGCTTCTGGCA+AGG + chr8_1:71667395-71667414 None:intergenic 50.0%
!! GATGCAAACAGAGCATTGGG+TGG - chr8_1:71667421-71667440 Msa1211900:intron 50.0%
!! AACAGAGCATTGGGTGGTTC+TGG - chr8_1:71667427-71667446 Msa1211900:intron 50.0%
CACTCACTGCACTCAATGTC+TGG + chr8_1:71667518-71667537 None:intergenic 50.0%
ATGTGAGAGAGACTGAGGGA+GGG + chr8_1:71665467-71665486 None:intergenic 50.0%
AATGTGAGAGAGACTGAGGG+AGG + chr8_1:71665468-71665487 None:intergenic 50.0%
!! ACAGCGACGATTTCTGGTTC+CGG + chr8_1:71665518-71665537 None:intergenic 50.0%
ATCTCTGGCACGCTTCTGAT+TGG + chr8_1:71665609-71665628 None:intergenic 50.0%
GCCAGAGATGACGACGAAAA+AGG - chr8_1:71665620-71665639 Msa1211900:three_prime_UTR 50.0%
GAAGCAAAAGGTGGAAGCAG+AGG - chr8_1:71665652-71665671 Msa1211900:three_prime_UTR 50.0%
CCCAATTTCACAGGACCTGA+TGG + chr8_1:71665698-71665717 None:intergenic 50.0%
TTTGGAGGGAAAGCGAGATG+AGG - chr8_1:71666269-71666288 Msa1211900:intron 50.0%
TTGGAGGGAAAGCGAGATGA+GGG - chr8_1:71666270-71666289 Msa1211900:intron 50.0%
GAGACTCCCCGATAAAAGTG+AGG - chr8_1:71666335-71666354 Msa1211900:intron 50.0%
TTTGGAGGAAAGGGGCGAAA+AGG + chr8_1:71666376-71666395 None:intergenic 50.0%
!! TGAGAGGGCTTTGGAGGAAA+GGG + chr8_1:71666385-71666404 None:intergenic 50.0%
!! ATGAGAGGGCTTTGGAGGAA+AGG + chr8_1:71666386-71666405 None:intergenic 50.0%
TAGGAGGGAAAGGGATGAGA+GGG + chr8_1:71666400-71666419 None:intergenic 50.0%
TTAGGAGGGAAAGGGATGAG+AGG + chr8_1:71666401-71666420 None:intergenic 50.0%
CTTGGGAGTTAGGAGGGAAA+GGG + chr8_1:71666409-71666428 None:intergenic 50.0%
CAAAGCCTTGGGAGTTAGGA+GGG + chr8_1:71666415-71666434 None:intergenic 50.0%
ACAAAGCCTTGGGAGTTAGG+AGG + chr8_1:71666416-71666435 None:intergenic 50.0%
TGTGAGTTTGGAGGGTAAGG+GGG - chr8_1:71666437-71666456 Msa1211900:intron 50.0%
! GGTAAGGGGGGACTTTGAAA+AGG - chr8_1:71666450-71666469 Msa1211900:intron 50.0%
! AGGGGGGACTTTGAAAAGGA+AGG - chr8_1:71666454-71666473 Msa1211900:intron 50.0%
! GGGGGGACTTTGAAAAGGAA+GGG - chr8_1:71666455-71666474 Msa1211900:intron 50.0%
! GGGGGACTTTGAAAAGGAAG+GGG - chr8_1:71666456-71666475 Msa1211900:intron 50.0%
!!! AGGAGGGTTTTGACGGGTTT+TGG - chr8_1:71666584-71666603 Msa1211900:intron 50.0%
!!! AGGGTTTTGACGGGTTTTGG+AGG - chr8_1:71666587-71666606 Msa1211900:intron 50.0%
!!! GGGTTTTGACGGGTTTTGGA+GGG - chr8_1:71666588-71666607 Msa1211900:intron 50.0%
TCCAACATCTGACCTTGGAC+TGG - chr8_1:71666883-71666902 Msa1211900:intron 50.0%
TCCAGTCCAAGGTCAGATGT+TGG + chr8_1:71666887-71666906 None:intergenic 50.0%
! TTGGACTGGATTGAGCTGCA+GGG - chr8_1:71666897-71666916 Msa1211900:intron 50.0%
CACTTGCATTGCTTCTGGCA+AGG + chr8_1:71667395-71667414 None:intergenic 50.0%
!! GATGCAAACAGAGCATTGGG+TGG - chr8_1:71667421-71667440 Msa1211900:intron 50.0%
!! AACAGAGCATTGGGTGGTTC+TGG - chr8_1:71667427-71667446 Msa1211900:intron 50.0%
CACTCACTGCACTCAATGTC+TGG + chr8_1:71667518-71667537 None:intergenic 50.0%
! AATGACGGAAACCGCTGCAC+CGG - chr8_1:71665496-71665515 Msa1211900:three_prime_UTR 55.0%
!! GATTTCTGGTTCCGGTGCAG+CGG + chr8_1:71665510-71665529 None:intergenic 55.0%
TGAAAACGCTGAACTCGCGG+AGG - chr8_1:71665550-71665569 Msa1211900:three_prime_UTR 55.0%
TGAACTCGCGGAGGTTAACG+CGG - chr8_1:71665559-71665578 Msa1211900:three_prime_UTR 55.0%
GCAAAAGGTGGAAGCAGAGG+TGG - chr8_1:71665655-71665674 Msa1211900:three_prime_UTR 55.0%
TGAAGAGGAAGGGGGTTAGG+AGG - chr8_1:71666189-71666208 Msa1211900:intron 55.0%
!! GAGAGGGCTTTGGAGGAAAG+GGG + chr8_1:71666384-71666403 None:intergenic 55.0%
! AAGGGATGAGAGGGCTTTGG+AGG + chr8_1:71666391-71666410 None:intergenic 55.0%
GGAAAGGGATGAGAGGGCTT+TGG + chr8_1:71666394-71666413 None:intergenic 55.0%
CCTTGGGAGTTAGGAGGGAA+AGG + chr8_1:71666410-71666429 None:intergenic 55.0%
CCTTTCCCTCCTAACTCCCA+AGG - chr8_1:71666407-71666426 Msa1211900:intron 55.0%
GTGAGTTTGGAGGGTAAGGG+GGG - chr8_1:71666438-71666457 Msa1211900:intron 55.0%
CTGCAGCTCAATCCAGTCCA+AGG + chr8_1:71666898-71666917 None:intergenic 55.0%
! CTTGGACTGGATTGAGCTGC+AGG - chr8_1:71666896-71666915 Msa1211900:intron 55.0%
!! AGAAAGCATCGAGGTGCTGG+TGG - chr8_1:71667454-71667473 Msa1211900:intron 55.0%
! GGTGGAAGAGGAGGTACACA+TGG - chr8_1:71667472-71667491 Msa1211900:intron 55.0%
! AGAGGAGGTACACATGGACG+TGG - chr8_1:71667478-71667497 Msa1211900:intron 55.0%
! GAGGAGGTACACATGGACGT+GGG - chr8_1:71667479-71667498 Msa1211900:intron 55.0%
! AGGAGGTACACATGGACGTG+GGG - chr8_1:71667480-71667499 Msa1211900:intron 55.0%
TACACATGGACGTGGGGGAA+AGG - chr8_1:71667486-71667505 Msa1211900:intron 55.0%
ACACATGGACGTGGGGGAAA+GGG - chr8_1:71667487-71667506 Msa1211900:intron 55.0%
! AATGACGGAAACCGCTGCAC+CGG - chr8_1:71665496-71665515 Msa1211900:three_prime_UTR 55.0%
!! GATTTCTGGTTCCGGTGCAG+CGG + chr8_1:71665510-71665529 None:intergenic 55.0%
TGAAAACGCTGAACTCGCGG+AGG - chr8_1:71665550-71665569 Msa1211900:three_prime_UTR 55.0%
TGAACTCGCGGAGGTTAACG+CGG - chr8_1:71665559-71665578 Msa1211900:three_prime_UTR 55.0%
GCAAAAGGTGGAAGCAGAGG+TGG - chr8_1:71665655-71665674 Msa1211900:three_prime_UTR 55.0%
TGAAGAGGAAGGGGGTTAGG+AGG - chr8_1:71666189-71666208 Msa1211900:intron 55.0%
!! GAGAGGGCTTTGGAGGAAAG+GGG + chr8_1:71666384-71666403 None:intergenic 55.0%
! AAGGGATGAGAGGGCTTTGG+AGG + chr8_1:71666391-71666410 None:intergenic 55.0%
GGAAAGGGATGAGAGGGCTT+TGG + chr8_1:71666394-71666413 None:intergenic 55.0%
CCTTGGGAGTTAGGAGGGAA+AGG + chr8_1:71666410-71666429 None:intergenic 55.0%
CCTTTCCCTCCTAACTCCCA+AGG - chr8_1:71666407-71666426 Msa1211900:intron 55.0%
GTGAGTTTGGAGGGTAAGGG+GGG - chr8_1:71666438-71666457 Msa1211900:intron 55.0%
CTGCAGCTCAATCCAGTCCA+AGG + chr8_1:71666898-71666917 None:intergenic 55.0%
! CTTGGACTGGATTGAGCTGC+AGG - chr8_1:71666896-71666915 Msa1211900:intron 55.0%
!! AGAAAGCATCGAGGTGCTGG+TGG - chr8_1:71667454-71667473 Msa1211900:intron 55.0%
! GGTGGAAGAGGAGGTACACA+TGG - chr8_1:71667472-71667491 Msa1211900:intron 55.0%
! AGAGGAGGTACACATGGACG+TGG - chr8_1:71667478-71667497 Msa1211900:intron 55.0%
! GAGGAGGTACACATGGACGT+GGG - chr8_1:71667479-71667498 Msa1211900:intron 55.0%
! AGGAGGTACACATGGACGTG+GGG - chr8_1:71667480-71667499 Msa1211900:intron 55.0%
TACACATGGACGTGGGGGAA+AGG - chr8_1:71667486-71667505 Msa1211900:intron 55.0%
ACACATGGACGTGGGGGAAA+GGG - chr8_1:71667487-71667506 Msa1211900:intron 55.0%
AGGAAGGGGGTTAGGAGGAC+AGG - chr8_1:71666194-71666213 Msa1211900:intron 60.0%
AAGGGGGTTAGGAGGACAGG+CGG - chr8_1:71666197-71666216 Msa1211900:intron 60.0%
!! CATCGAGGTGCTGGTGGAAG+AGG - chr8_1:71667460-71667479 Msa1211900:intron 60.0%
! GGAGGTACACATGGACGTGG+GGG - chr8_1:71667481-71667500 Msa1211900:intron 60.0%
AGAGACTGAGGGAGGGTTCG+TGG + chr8_1:71665460-71665479 None:intergenic 60.0%
AGGAAGGGGGTTAGGAGGAC+AGG - chr8_1:71666194-71666213 Msa1211900:intron 60.0%
AAGGGGGTTAGGAGGACAGG+CGG - chr8_1:71666197-71666216 Msa1211900:intron 60.0%
!! CATCGAGGTGCTGGTGGAAG+AGG - chr8_1:71667460-71667479 Msa1211900:intron 60.0%
! GGAGGTACACATGGACGTGG+GGG - chr8_1:71667481-71667500 Msa1211900:intron 60.0%
!! CGAGGTGCTGGTGGAAGAGG+AGG - chr8_1:71667463-71667482 Msa1211900:intron 65.0%
!! CGAGGTGCTGGTGGAAGAGG+AGG - chr8_1:71667463-71667482 Msa1211900:intron 65.0%
GAGGACAGGCGGCGAGCAGA+GGG - chr8_1:71666208-71666227 Msa1211900:intron 70.0%
GAGGACAGGCGGCGAGCAGA+GGG - chr8_1:71666208-71666227 Msa1211900:intron 70.0%
GGAGGACAGGCGGCGAGCAG+AGG - chr8_1:71666207-71666226 Msa1211900:intron 75.0%
GGAGGACAGGCGGCGAGCAG+AGG - chr8_1:71666207-71666226 Msa1211900:intron 75.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 71665458 71667910 71665458 ID=Msa1211900;Name=Msa1211900
chr8_1 mRNA 71665458 71667910 71665458 ID=Msa1211900-mRNA-1;Parent=Msa1211900;Name=Msa1211900-mRNA-1;_AED=0.01;_eAED=0.01;_QI=39|1|1|1|1|1|2|385|210
chr8_1 exon 71665458 71666166 71665458 ID=Msa1211900-mRNA-1:exon:24137;Parent=Msa1211900-mRNA-1
chr8_1 exon 71667563 71667910 71667563 ID=Msa1211900-mRNA-1:exon:24136;Parent=Msa1211900-mRNA-1
chr8_1 five_prime_UTR 71667872 71667910 71667872 ID=Msa1211900-mRNA-1:five_prime_utr;Parent=Msa1211900-mRNA-1
chr8_1 CDS 71667563 71667871 71667563 ID=Msa1211900-mRNA-1:cds;Parent=Msa1211900-mRNA-1
chr8_1 CDS 71665843 71666166 71665843 ID=Msa1211900-mRNA-1:cds;Parent=Msa1211900-mRNA-1
chr8_1 three_prime_UTR 71665458 71665842 71665458 ID=Msa1211900-mRNA-1:three_prime_utr;Parent=Msa1211900-mRNA-1
Gene Sequence

>Msa1211900

ATGACGGAAACCGCTGCACCGGAACCAGAAATCGTCGCTGTAGACATGGTTATTGAAAACGCTGAACTCGCGGAGGTTAACGCGGTCGATTCAGAAGCGAACGACGAGTCCAATCAGAAGCGTGCCAGAGATGACGACGAAAAAGGTGTTTCCAAGAAGCAAAAGGTGGAAGCAGAGGTGGAAGAAGAAGAGATGAAACCATCAGGTCCTGTGAAATTGGGTTACAAAACTTTCGGCTCTTCTTTGGAGTTGTTCGATTATTTCAACAGTTTTCTTCATGCTTGGGGTCCTAATCTTAATGTTAACAAGTATGAACATGCAATGTTACTAGAATTGCTTATGAAAGGTCATCCAGAGCCTGATAAAAAGATTGGTGGAAAAATCTGTGCTTTCCAAGTTCGCAAGCATCCTACATGGAAAAGCAAGTGTTTCTTTCTCATTAGGGAGGATGAATCAGCTGATGATTTTAGCTTCCGTAAATGTGTGGATCATATTCTTCCCTTGCCAGAAGCAATGCAAGTGAAACATGATGCAAACAGAGCATTGGGTGGTTCTGGTAAAAGAAAGCATCGAGGTGCTGGTGGAAGAGGAGGTACACATGGACGTGGGGGAAAGGGAAAGTCCAGACATTGA
Protein sequence

>Msa1211900

MTETAAPEPEIVAVDMVIENAELAEVNAVDSEANDESNQKRARDDDEKGVSKKQKVEAEVEEEEMKPSGPVKLGYKTFGSSLELFDYFNSFLHAWGPNLNVNKYEHAMLLELLMKGHPEPDKKIGGKICAFQVRKHPTWKSKCFFLIREDESADDFSFRKCVDHILPLPEAMQVKHDANRALGGSGKRKHRGAGGRGGTHGRGGKGKSRH*