AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1212440

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1212440 MtrunA17_Chr4g0061181 98.276 174 3 0 1 174 1 174 1.24e-125 350
Msa1212440 MtrunA17_Chr5g0418311 64.088 181 57 2 1 174 1 180 4.61e-81 238
Msa1212440 MtrunA17_Chr4g0005561 46.552 174 89 1 1 174 1 170 1.17e-55 173
Msa1212440 MtrunA17_Chr7g0243261 47.701 174 87 1 1 174 1 170 9.39e-55 171
Msa1212440 MtrunA17_Chr8g0378501 32.500 120 73 5 49 163 22 138 5.53e-12 60.8
Msa1212440 MtrunA17_Chr4g0048871 34.831 89 55 2 51 138 28 114 5.68e-12 60.8
Msa1212440 MtrunA17_Chr4g0048861 33.333 108 67 4 41 146 17 121 1.99e-11 59.3
Msa1212440 MtrunA17_Chr7g0234601 29.060 117 79 3 56 171 38 151 3.20e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1212440 AT2G03350.1 65.909 176 54 2 1 171 1 175 3.99e-79 233
Msa1212440 AT5G37070.1 49.425 174 84 2 1 174 1 170 7.49e-57 176
Msa1212440 AT3G08890.1 48.851 174 85 2 1 174 1 170 1.15e-55 173
Msa1212440 AT3G08890.2 48.851 174 85 2 1 174 1 170 1.15e-55 173
Msa1212440 AT5G01610.2 46.552 174 89 2 1 174 1 170 4.35e-53 167
Msa1212440 AT5G01610.1 46.552 174 89 2 1 174 1 170 4.35e-53 167
Msa1212440 AT1G61667.1 30.894 123 70 4 50 165 18 132 5.83e-12 60.8
Msa1212440 AT1G61667.2 30.894 123 70 4 50 165 54 168 1.16e-11 60.8
Msa1212440 AT5G16380.1 25.185 135 98 2 39 172 16 148 1.66e-11 60.5

Find 57 sgRNAs with CRISPR-Local

Find 357 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATCTCTTCCTTGGCTTTCT+TGG 0.159151 8_1:+72329734 None:intergenic
TAAAATTTCTCACGCTGATT+TGG 0.239675 8_1:+72330285 None:intergenic
AATCTTCTTCTCTGATGATT+TGG 0.250374 8_1:-72327993 None:intergenic
GGATAAAGCTATGACTAAAC+TGG 0.259672 8_1:-72329772 Msa1212440:CDS
TGACTAAACTGGGAAGCTTT+TGG 0.282276 8_1:-72329761 Msa1212440:CDS
ATTTGTATGTGTGACTTTAG+AGG 0.325150 8_1:-72328161 Msa1212440:three_prime_UTR
GGAAAACTCATTGTTATAGA+TGG 0.353422 8_1:-72328398 Msa1212440:CDS
CAAGGTTCTTGTGTGGGTTA+AGG 0.357016 8_1:-72328366 Msa1212440:CDS
AATCATCAGAGAAGAAGATT+TGG 0.362460 8_1:+72327996 None:intergenic
CCCTTCTGAGGTATGCTTCA+AGG 0.368099 8_1:-72328471 Msa1212440:CDS
CACACACCATTTGTGGAGAT+TGG 0.371485 8_1:-72330373 None:intergenic
AATCATTACCAGATCTCCTT+AGG 0.387760 8_1:-72328586 Msa1212440:CDS
CTCGTAGCATGTTATATTAC+GGG 0.393055 8_1:+72328535 None:intergenic
GACTTAGAGTGTCACTATCT+TGG 0.406177 8_1:+72329861 None:intergenic
ACTCGTAGCATGTTATATTA+CGG 0.409672 8_1:+72328534 None:intergenic
GTTATAAGTCTGACAAAGTA+TGG 0.416428 8_1:-72328322 Msa1212440:CDS
AGCTTCACGAGGCATTTCAT+AGG 0.419952 8_1:+72328259 None:intergenic
GGCATTTCATAGGCATCTTT+AGG 0.420736 8_1:+72328269 None:intergenic
TATGTGAGAAATCTCTTCCT+TGG 0.429865 8_1:+72329725 None:intergenic
CAAACACAGTTCTTAACAAC+CGG 0.443114 8_1:+72328082 None:intergenic
TTATTGATTCTAATGAATAT+AGG 0.457291 8_1:-72328222 Msa1212440:exon
TTGTGCTCCCTAAGGAGATC+TGG 0.464745 8_1:+72328578 None:intergenic
CGTACGCTGCATAACAAATC+AGG 0.478326 8_1:+72329907 None:intergenic
GTCACTATCTTGGATGGTAA+TGG 0.481563 8_1:+72329871 None:intergenic
CAGAACAGAACACTTATTCA+TGG 0.490170 8_1:+72330326 None:intergenic
TATGATGATGATGATATAGT+TGG 0.498451 8_1:-72328130 Msa1212440:three_prime_UTR
AATGCCTCGTGAAGCTGTTA+AGG 0.503909 8_1:-72328252 Msa1212440:CDS
TACGAGTTTGATGAATCAAA+AGG 0.504698 8_1:-72328518 Msa1212440:CDS
CCACTGGTGTTAAGAAATCA+AGG 0.511551 8_1:-72328292 Msa1212440:CDS
TCCTTGAAGCATACCTCAGA+AGG 0.512000 8_1:+72328470 None:intergenic
AAAGTATGGTTCACTACCAC+TGG 0.534576 8_1:-72328308 Msa1212440:CDS
ATCATTACCAGATCTCCTTA+GGG 0.537160 8_1:-72328585 Msa1212440:CDS
TGAATCAAAAGGAAAGTTGA+TGG 0.539969 8_1:-72328507 Msa1212440:CDS
CGTCAAAGGAACATTGTCAA+AGG 0.540806 8_1:-72328420 Msa1212440:CDS
AGATATTCAAATCGCGTCAA+AGG 0.541661 8_1:-72328434 Msa1212440:CDS
GTCAAAGGAACATTGTCAAA+GGG 0.541892 8_1:-72328419 Msa1212440:CDS
GCATTTGTCCTCCCCTTCTG+AGG 0.542896 8_1:-72328483 Msa1212440:CDS
AGGGAGCACAACCTTCCTCC+AGG 0.556067 8_1:-72328566 Msa1212440:CDS
CTCAAATACTGTTGAAGACA+AGG 0.560814 8_1:-72329113 Msa1212440:CDS
GAGGAAGGTTGTGCTCCCTA+AGG 0.561252 8_1:+72328570 None:intergenic
GAAGACCAAGGTTCTTGTGT+GGG 0.583305 8_1:-72328372 Msa1212440:CDS
TGCACATGTTACATTGTGAC+CGG 0.583605 8_1:-72328101 Msa1212440:three_prime_UTR
CTTAACCCACACAAGAACCT+TGG 0.584699 8_1:+72328367 None:intergenic
GATAAAGCTATGACTAAACT+GGG 0.587036 8_1:-72329771 Msa1212440:CDS
TAGAGTGTCACTATCTTGGA+TGG 0.598900 8_1:+72329865 None:intergenic
CCTTGATTTCTTAACACCAG+TGG 0.601105 8_1:+72328292 None:intergenic
GCCTCGTGAAGCTGTTAAGG+TGG 0.601228 8_1:-72328249 Msa1212440:CDS
TTGGATCTCCAAGAAAGCCA+AGG 0.613343 8_1:-72329742 Msa1212440:CDS
TGAAGACCAAGGTTCTTGTG+TGG 0.616802 8_1:-72328373 Msa1212440:CDS
CCTTGAAGCATACCTCAGAA+GGG 0.625952 8_1:+72328471 None:intergenic
GAAGCATACCTCAGAAGGGG+AGG 0.636659 8_1:+72328475 None:intergenic
TCGTAGCATGTTATATTACG+GGG 0.641980 8_1:+72328536 None:intergenic
CTTGAAGCATACCTCAGAAG+GGG 0.649660 8_1:+72328472 None:intergenic
TCCACCTTAACAGCTTCACG+AGG 0.680099 8_1:+72328248 None:intergenic
GAGACTCACAGATAAGTCGT+CGG 0.681263 8_1:+72329701 None:intergenic
CGTAGCATGTTATATTACGG+GGG 0.700332 8_1:+72328537 None:intergenic
TATAGATGGAATGAAGACCA+AGG 0.710812 8_1:-72328384 Msa1212440:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAATATTTACAG+GGG + chr8_1:72328184-72328203 None:intergenic 10.0%
!! CAAAAAAAAAAATATTTACA+GGG + chr8_1:72328185-72328204 None:intergenic 10.0%
!! TCAAAAAAAAAAATATTTAC+AGG + chr8_1:72328186-72328205 None:intergenic 10.0%
!! AAAACAAAAAAAATTTATAG+GGG + chr8_1:72328214-72328233 None:intergenic 10.0%
!! CAAAACAAAAAAAATTTATA+GGG + chr8_1:72328215-72328234 None:intergenic 10.0%
!! TCAAAACAAAAAAAATTTAT+AGG + chr8_1:72328216-72328235 None:intergenic 10.0%
!! AAATTCAAGATTTAAATATA+TGG + chr8_1:72328725-72328744 None:intergenic 10.0%
!! AAAAAAAAAAATATTTACAG+GGG + chr8_1:72328184-72328203 None:intergenic 10.0%
!! CAAAAAAAAAAATATTTACA+GGG + chr8_1:72328185-72328204 None:intergenic 10.0%
!! TCAAAAAAAAAAATATTTAC+AGG + chr8_1:72328186-72328205 None:intergenic 10.0%
!! AAAACAAAAAAAATTTATAG+GGG + chr8_1:72328214-72328233 None:intergenic 10.0%
!! CAAAACAAAAAAAATTTATA+GGG + chr8_1:72328215-72328234 None:intergenic 10.0%
!! TCAAAACAAAAAAAATTTAT+AGG + chr8_1:72328216-72328235 None:intergenic 10.0%
!! AAATTCAAGATTTAAATATA+TGG + chr8_1:72328725-72328744 None:intergenic 10.0%
!! AAAAAAAAAATATTTACAGG+GGG + chr8_1:72328183-72328202 None:intergenic 15.0%
!! AAACAAAAAAAATTTATAGG+GGG + chr8_1:72328213-72328232 None:intergenic 15.0%
!!! AAATAAAATTGGTTTTTGTT+TGG - chr8_1:72328283-72328302 Msa1212440:CDS 15.0%
!! AATCAAAACAAAAAATTTAC+AGG - chr8_1:72328320-72328339 Msa1212440:CDS 15.0%
!! ATCAAAACAAAAAATTTACA+GGG - chr8_1:72328321-72328340 Msa1212440:CDS 15.0%
!! GAAAGAAATGAATATAAAAA+TGG + chr8_1:72328538-72328557 None:intergenic 15.0%
!!! TTTTTTAGTTATGTCAATTT+TGG - chr8_1:72328753-72328772 Msa1212440:intron 15.0%
!! AATGATATAATGAGAATTAA+GGG - chr8_1:72328996-72329015 Msa1212440:intron 15.0%
!!! TTTTGTAGTTTTTTTTCTTA+GGG - chr8_1:72329539-72329558 Msa1212440:intron 15.0%
!!! TTATTGATTCTAATGAATAT+AGG - chr8_1:72330133-72330152 Msa1212440:intron 15.0%
!! AAAAAAAAAATATTTACAGG+GGG + chr8_1:72328183-72328202 None:intergenic 15.0%
!! AAACAAAAAAAATTTATAGG+GGG + chr8_1:72328213-72328232 None:intergenic 15.0%
!!! AAATAAAATTGGTTTTTGTT+TGG - chr8_1:72328283-72328302 Msa1212440:CDS 15.0%
!! AATCAAAACAAAAAATTTAC+AGG - chr8_1:72328320-72328339 Msa1212440:CDS 15.0%
!! ATCAAAACAAAAAATTTACA+GGG - chr8_1:72328321-72328340 Msa1212440:CDS 15.0%
!! GAAAGAAATGAATATAAAAA+TGG + chr8_1:72328538-72328557 None:intergenic 15.0%
!!! TTTTTTAGTTATGTCAATTT+TGG - chr8_1:72328753-72328772 Msa1212440:intron 15.0%
!! AATGATATAATGAGAATTAA+GGG - chr8_1:72328996-72329015 Msa1212440:intron 15.0%
!!! TTTTGTAGTTTTTTTTCTTA+GGG - chr8_1:72329539-72329558 Msa1212440:intron 15.0%
!!! TTATTGATTCTAATGAATAT+AGG - chr8_1:72330133-72330152 Msa1212440:intron 15.0%
!!! TTTTCCCTTTTGTTTAATTT+TGG - chr8_1:72328111-72328130 Msa1212440:three_prime_UTR 20.0%
!!! TTTCCCTTTTGTTTAATTTT+GGG - chr8_1:72328112-72328131 Msa1212440:three_prime_UTR 20.0%
!! TAACCCAAAATTAAACAAAA+GGG + chr8_1:72328118-72328137 None:intergenic 20.0%
!! TTAACCCAAAATTAAACAAA+AGG + chr8_1:72328119-72328138 None:intergenic 20.0%
!!! TTGTTTAATTTTGGGTTAAT+AGG - chr8_1:72328120-72328139 Msa1212440:three_prime_UTR 20.0%
!!! AAGAAATTTTCGTTTTTGTT+TGG + chr8_1:72328255-72328274 None:intergenic 20.0%
!! ATGAAAATTAAAGGGTTAAT+AGG + chr8_1:72328374-72328393 None:intergenic 20.0%
!!! ATTAACCCTTTAATTTTCAT+TGG - chr8_1:72328374-72328393 Msa1212440:CDS 20.0%
!! AAACTCCAATGAAAATTAAA+GGG + chr8_1:72328382-72328401 None:intergenic 20.0%
!! TAAACTCCAATGAAAATTAA+AGG + chr8_1:72328383-72328402 None:intergenic 20.0%
!!! TTATGTCAATTTTGGATAAT+TGG - chr8_1:72328761-72328780 Msa1212440:intron 20.0%
!! CAATGATATAATGAGAATTA+AGG - chr8_1:72328995-72329014 Msa1212440:intron 20.0%
!! ATGATATAATGAGAATTAAG+GGG - chr8_1:72328997-72329016 Msa1212440:intron 20.0%
!!! GTTTTGTAGTTTTTTTTCTT+CGG + chr8_1:72329538-72329557 None:intergenic 20.0%
!!! GTTTTGTAGTTTTTTTTCTT+AGG - chr8_1:72329538-72329557 Msa1212440:intron 20.0%
!!! TTTGTAGTTTTTTTTCTTAG+GGG - chr8_1:72329540-72329559 Msa1212440:intron 20.0%
!! CTGCAAATATGTTAAAAAAA+TGG + chr8_1:72329615-72329634 None:intergenic 20.0%
!!! TTTTCCCTTTTGTTTAATTT+TGG - chr8_1:72328111-72328130 Msa1212440:three_prime_UTR 20.0%
!!! TTTCCCTTTTGTTTAATTTT+GGG - chr8_1:72328112-72328131 Msa1212440:three_prime_UTR 20.0%
!! TAACCCAAAATTAAACAAAA+GGG + chr8_1:72328118-72328137 None:intergenic 20.0%
!! TTAACCCAAAATTAAACAAA+AGG + chr8_1:72328119-72328138 None:intergenic 20.0%
!!! TTGTTTAATTTTGGGTTAAT+AGG - chr8_1:72328120-72328139 Msa1212440:three_prime_UTR 20.0%
!!! AAGAAATTTTCGTTTTTGTT+TGG + chr8_1:72328255-72328274 None:intergenic 20.0%
!! ATGAAAATTAAAGGGTTAAT+AGG + chr8_1:72328374-72328393 None:intergenic 20.0%
!!! ATTAACCCTTTAATTTTCAT+TGG - chr8_1:72328374-72328393 Msa1212440:CDS 20.0%
!! AAACTCCAATGAAAATTAAA+GGG + chr8_1:72328382-72328401 None:intergenic 20.0%
!! TAAACTCCAATGAAAATTAA+AGG + chr8_1:72328383-72328402 None:intergenic 20.0%
!!! TTATGTCAATTTTGGATAAT+TGG - chr8_1:72328761-72328780 Msa1212440:intron 20.0%
!! CAATGATATAATGAGAATTA+AGG - chr8_1:72328995-72329014 Msa1212440:intron 20.0%
!! ATGATATAATGAGAATTAAG+GGG - chr8_1:72328997-72329016 Msa1212440:intron 20.0%
!!! GTTTTGTAGTTTTTTTTCTT+CGG + chr8_1:72329538-72329557 None:intergenic 20.0%
!!! GTTTTGTAGTTTTTTTTCTT+AGG - chr8_1:72329538-72329557 Msa1212440:intron 20.0%
!!! TTTGTAGTTTTTTTTCTTAG+GGG - chr8_1:72329540-72329559 Msa1212440:intron 20.0%
!! CTGCAAATATGTTAAAAAAA+TGG + chr8_1:72329615-72329634 None:intergenic 20.0%
!! TATTCATGGTGATGAAAAAA+TGG + chr8_1:72328018-72328037 None:intergenic 25.0%
! GTTTATATACTTCAAGGTAT+AGG + chr8_1:72329068-72329087 None:intergenic 25.0%
! TAGTCAGTTTATATACTTCA+AGG + chr8_1:72329074-72329093 None:intergenic 25.0%
!!! TTGTAGTTTTTTTTCTTAGG+GGG - chr8_1:72329541-72329560 Msa1212440:intron 25.0%
! GTAATTTATGTATGCATCTA+TGG + chr8_1:72329657-72329676 None:intergenic 25.0%
! TAGATGCATACATAAATTAC+TGG - chr8_1:72329657-72329676 Msa1212440:intron 25.0%
! GACTTATTAAATTCTGTTTC+AGG - chr8_1:72329735-72329754 Msa1212440:CDS 25.0%
!! TATGATGATGATGATATAGT+TGG - chr8_1:72330225-72330244 Msa1212440:intron 25.0%
!! TATTCATGGTGATGAAAAAA+TGG + chr8_1:72328018-72328037 None:intergenic 25.0%
! GTTTATATACTTCAAGGTAT+AGG + chr8_1:72329068-72329087 None:intergenic 25.0%
! TAGTCAGTTTATATACTTCA+AGG + chr8_1:72329074-72329093 None:intergenic 25.0%
!!! TTGTAGTTTTTTTTCTTAGG+GGG - chr8_1:72329541-72329560 Msa1212440:intron 25.0%
! GTAATTTATGTATGCATCTA+TGG + chr8_1:72329657-72329676 None:intergenic 25.0%
! TAGATGCATACATAAATTAC+TGG - chr8_1:72329657-72329676 Msa1212440:intron 25.0%
! GACTTATTAAATTCTGTTTC+AGG - chr8_1:72329735-72329754 Msa1212440:CDS 25.0%
!! TATGATGATGATGATATAGT+TGG - chr8_1:72330225-72330244 Msa1212440:intron 25.0%
!!! TTTGGATTTTGAGGCTAAAA+TGG + chr8_1:72328055-72328074 None:intergenic 30.0%
! TAAAATTTCTCACGCTGATT+TGG + chr8_1:72328073-72328092 None:intergenic 30.0%
GAAATGACTTATATTACAGG+AGG + chr8_1:72328152-72328171 None:intergenic 30.0%
CCTGTAATATAAGTCATTTC+CGG - chr8_1:72328152-72328171 Msa1212440:three_prime_UTR 30.0%
!! TTTTTGTTTGGCTTATTAGG+GGG + chr8_1:72328243-72328262 None:intergenic 30.0%
!! GTTTTTGTTTGGCTTATTAG+GGG + chr8_1:72328244-72328263 None:intergenic 30.0%
!! CGTTTTTGTTTGGCTTATTA+GGG + chr8_1:72328245-72328264 None:intergenic 30.0%
!! TCGTTTTTGTTTGGCTTATT+AGG + chr8_1:72328246-72328265 None:intergenic 30.0%
! GTCTTTACCTTGTGAATTTT+CGG + chr8_1:72328352-72328371 None:intergenic 30.0%
AGAAAAACTGAGAAGGAAAA+TGG - chr8_1:72328562-72328581 Msa1212440:CDS 30.0%
GATAAAGCTATGACTAAACT+GGG - chr8_1:72328584-72328603 Msa1212440:CDS 30.0%
ATCATATCAGTCTTCAACAT+GGG + chr8_1:72328935-72328954 None:intergenic 30.0%
TATCATATCAGTCTTCAACA+TGG + chr8_1:72328936-72328955 None:intergenic 30.0%
!! GCTGATTGATTTTCTTGTAA+TGG - chr8_1:72328972-72328991 Msa1212440:intron 30.0%
! TTGTGTCTCGACAAAATTTT+GGG + chr8_1:72329037-72329056 None:intergenic 30.0%
! TTTGTGTCTCGACAAAATTT+TGG + chr8_1:72329038-72329057 None:intergenic 30.0%
GTTATTAACACCAAGAGTAA+AGG + chr8_1:72329130-72329149 None:intergenic 30.0%
!!! TTGTAGTTTTTTTTCTTCGG+AGG + chr8_1:72329363-72329382 None:intergenic 30.0%
ACTCGTAGCATGTTATATTA+CGG + chr8_1:72329824-72329843 None:intergenic 30.0%
TACGAGTTTGATGAATCAAA+AGG - chr8_1:72329837-72329856 Msa1212440:five_prime_UTR 30.0%
TGAATCAAAAGGAAAGTTGA+TGG - chr8_1:72329848-72329867 Msa1212440:five_prime_UTR 30.0%
GGAAAACTCATTGTTATAGA+TGG - chr8_1:72329957-72329976 Msa1212440:intron 30.0%
GTTATAAGTCTGACAAAGTA+TGG - chr8_1:72330033-72330052 Msa1212440:intron 30.0%
ATTTGTATGTGTGACTTTAG+AGG - chr8_1:72330194-72330213 Msa1212440:intron 30.0%
AATCATCAGAGAAGAAGATT+TGG + chr8_1:72330362-72330381 None:intergenic 30.0%
AAATCTTCTTCTCTGATGAT+TGG - chr8_1:72330361-72330380 Msa1212440:five_prime_UTR 30.0%
!!! TTTGGATTTTGAGGCTAAAA+TGG + chr8_1:72328055-72328074 None:intergenic 30.0%
! TAAAATTTCTCACGCTGATT+TGG + chr8_1:72328073-72328092 None:intergenic 30.0%
GAAATGACTTATATTACAGG+AGG + chr8_1:72328152-72328171 None:intergenic 30.0%
CCTGTAATATAAGTCATTTC+CGG - chr8_1:72328152-72328171 Msa1212440:three_prime_UTR 30.0%
!! TTTTTGTTTGGCTTATTAGG+GGG + chr8_1:72328243-72328262 None:intergenic 30.0%
!! GTTTTTGTTTGGCTTATTAG+GGG + chr8_1:72328244-72328263 None:intergenic 30.0%
!! CGTTTTTGTTTGGCTTATTA+GGG + chr8_1:72328245-72328264 None:intergenic 30.0%
!! TCGTTTTTGTTTGGCTTATT+AGG + chr8_1:72328246-72328265 None:intergenic 30.0%
! GTCTTTACCTTGTGAATTTT+CGG + chr8_1:72328352-72328371 None:intergenic 30.0%
AGAAAAACTGAGAAGGAAAA+TGG - chr8_1:72328562-72328581 Msa1212440:CDS 30.0%
GATAAAGCTATGACTAAACT+GGG - chr8_1:72328584-72328603 Msa1212440:CDS 30.0%
ATCATATCAGTCTTCAACAT+GGG + chr8_1:72328935-72328954 None:intergenic 30.0%
TATCATATCAGTCTTCAACA+TGG + chr8_1:72328936-72328955 None:intergenic 30.0%
!! GCTGATTGATTTTCTTGTAA+TGG - chr8_1:72328972-72328991 Msa1212440:intron 30.0%
! TTGTGTCTCGACAAAATTTT+GGG + chr8_1:72329037-72329056 None:intergenic 30.0%
! TTTGTGTCTCGACAAAATTT+TGG + chr8_1:72329038-72329057 None:intergenic 30.0%
GTTATTAACACCAAGAGTAA+AGG + chr8_1:72329130-72329149 None:intergenic 30.0%
!!! TTGTAGTTTTTTTTCTTCGG+AGG + chr8_1:72329363-72329382 None:intergenic 30.0%
ACTCGTAGCATGTTATATTA+CGG + chr8_1:72329824-72329843 None:intergenic 30.0%
TACGAGTTTGATGAATCAAA+AGG - chr8_1:72329837-72329856 Msa1212440:five_prime_UTR 30.0%
TGAATCAAAAGGAAAGTTGA+TGG - chr8_1:72329848-72329867 Msa1212440:five_prime_UTR 30.0%
GGAAAACTCATTGTTATAGA+TGG - chr8_1:72329957-72329976 Msa1212440:intron 30.0%
GTTATAAGTCTGACAAAGTA+TGG - chr8_1:72330033-72330052 Msa1212440:intron 30.0%
ATTTGTATGTGTGACTTTAG+AGG - chr8_1:72330194-72330213 Msa1212440:intron 30.0%
AATCATCAGAGAAGAAGATT+TGG + chr8_1:72330362-72330381 None:intergenic 30.0%
CAGAACAGAACACTTATTCA+TGG + chr8_1:72328032-72328051 None:intergenic 35.0%
CCGGAAATGACTTATATTAC+AGG + chr8_1:72328155-72328174 None:intergenic 35.0%
GGAAAAACCGAAAATTCACA+AGG - chr8_1:72328342-72328361 Msa1212440:CDS 35.0%
TTCTGCAAGAAAAACTGAGA+AGG - chr8_1:72328555-72328574 Msa1212440:CDS 35.0%
GGATAAAGCTATGACTAAAC+TGG - chr8_1:72328583-72328602 Msa1212440:CDS 35.0%
TATGTGAGAAATCTCTTCCT+TGG + chr8_1:72328633-72328652 None:intergenic 35.0%
! TGTGTCTCGACAAAATTTTG+GGG + chr8_1:72329036-72329055 None:intergenic 35.0%
! AAGGCTCATACTGATCATTT+TGG + chr8_1:72329111-72329130 None:intergenic 35.0%
CTCAAATACTGTTGAAGACA+AGG - chr8_1:72329242-72329261 Msa1212440:intron 35.0%
! CTTTTCATCAACAAGCTCAA+AGG - chr8_1:72329270-72329289 Msa1212440:intron 35.0%
! TCGCAACTTTGGGAAAATTA+GGG + chr8_1:72329334-72329353 None:intergenic 35.0%
! ATCGCAACTTTGGGAAAATT+AGG + chr8_1:72329335-72329354 None:intergenic 35.0%
! TTTTCCCAAAGTTGCGATTT+TGG - chr8_1:72329337-72329356 Msa1212440:intron 35.0%
AAGGCCAAAAAAATAACACG+TGG + chr8_1:72329478-72329497 None:intergenic 35.0%
!!! ACGTGTTATTTTTTTGGCCT+TGG - chr8_1:72329477-72329496 Msa1212440:intron 35.0%
!!! CGTGTTATTTTTTTGGCCTT+GGG - chr8_1:72329478-72329497 Msa1212440:intron 35.0%
!!! GTGTTATTTTTTTGGCCTTG+GGG - chr8_1:72329479-72329498 Msa1212440:intron 35.0%
!!! TGTTATTTTTTTGGCCTTGG+GGG - chr8_1:72329480-72329499 Msa1212440:intron 35.0%
! TTTTGCAACTGTAGCAGTTT+TGG + chr8_1:72329507-72329526 None:intergenic 35.0%
TGCTACAGTTGCAAAACTTA+GGG - chr8_1:72329511-72329530 Msa1212440:intron 35.0%
AATCATTACCAGATCTCCTT+AGG - chr8_1:72329769-72329788 Msa1212440:CDS 35.0%
ATCATTACCAGATCTCCTTA+GGG - chr8_1:72329770-72329789 Msa1212440:CDS 35.0%
TCGTAGCATGTTATATTACG+GGG + chr8_1:72329822-72329841 None:intergenic 35.0%
CTCGTAGCATGTTATATTAC+GGG + chr8_1:72329823-72329842 None:intergenic 35.0%
AGATATTCAAATCGCGTCAA+AGG - chr8_1:72329921-72329940 Msa1212440:intron 35.0%
GTCAAAGGAACATTGTCAAA+GGG - chr8_1:72329936-72329955 Msa1212440:intron 35.0%
TATAGATGGAATGAAGACCA+AGG - chr8_1:72329971-72329990 Msa1212440:intron 35.0%
CAAACACAGTTCTTAACAAC+CGG + chr8_1:72330276-72330295 None:intergenic 35.0%
CAGAACAGAACACTTATTCA+TGG + chr8_1:72328032-72328051 None:intergenic 35.0%
CCGGAAATGACTTATATTAC+AGG + chr8_1:72328155-72328174 None:intergenic 35.0%
GGAAAAACCGAAAATTCACA+AGG - chr8_1:72328342-72328361 Msa1212440:CDS 35.0%
TTCTGCAAGAAAAACTGAGA+AGG - chr8_1:72328555-72328574 Msa1212440:CDS 35.0%
GGATAAAGCTATGACTAAAC+TGG - chr8_1:72328583-72328602 Msa1212440:CDS 35.0%
TATGTGAGAAATCTCTTCCT+TGG + chr8_1:72328633-72328652 None:intergenic 35.0%
! TGTGTCTCGACAAAATTTTG+GGG + chr8_1:72329036-72329055 None:intergenic 35.0%
! AAGGCTCATACTGATCATTT+TGG + chr8_1:72329111-72329130 None:intergenic 35.0%
CTCAAATACTGTTGAAGACA+AGG - chr8_1:72329242-72329261 Msa1212440:intron 35.0%
! CTTTTCATCAACAAGCTCAA+AGG - chr8_1:72329270-72329289 Msa1212440:intron 35.0%
! TCGCAACTTTGGGAAAATTA+GGG + chr8_1:72329334-72329353 None:intergenic 35.0%
! ATCGCAACTTTGGGAAAATT+AGG + chr8_1:72329335-72329354 None:intergenic 35.0%
! TTTTCCCAAAGTTGCGATTT+TGG - chr8_1:72329337-72329356 Msa1212440:intron 35.0%
AAGGCCAAAAAAATAACACG+TGG + chr8_1:72329478-72329497 None:intergenic 35.0%
!!! ACGTGTTATTTTTTTGGCCT+TGG - chr8_1:72329477-72329496 Msa1212440:intron 35.0%
!!! CGTGTTATTTTTTTGGCCTT+GGG - chr8_1:72329478-72329497 Msa1212440:intron 35.0%
!!! GTGTTATTTTTTTGGCCTTG+GGG - chr8_1:72329479-72329498 Msa1212440:intron 35.0%
!!! TGTTATTTTTTTGGCCTTGG+GGG - chr8_1:72329480-72329499 Msa1212440:intron 35.0%
! TTTTGCAACTGTAGCAGTTT+TGG + chr8_1:72329507-72329526 None:intergenic 35.0%
TGCTACAGTTGCAAAACTTA+GGG - chr8_1:72329511-72329530 Msa1212440:intron 35.0%
AATCATTACCAGATCTCCTT+AGG - chr8_1:72329769-72329788 Msa1212440:CDS 35.0%
ATCATTACCAGATCTCCTTA+GGG - chr8_1:72329770-72329789 Msa1212440:CDS 35.0%
TCGTAGCATGTTATATTACG+GGG + chr8_1:72329822-72329841 None:intergenic 35.0%
CTCGTAGCATGTTATATTAC+GGG + chr8_1:72329823-72329842 None:intergenic 35.0%
AGATATTCAAATCGCGTCAA+AGG - chr8_1:72329921-72329940 Msa1212440:intron 35.0%
GTCAAAGGAACATTGTCAAA+GGG - chr8_1:72329936-72329955 Msa1212440:intron 35.0%
TATAGATGGAATGAAGACCA+AGG - chr8_1:72329971-72329990 Msa1212440:intron 35.0%
CAAACACAGTTCTTAACAAC+CGG + chr8_1:72330276-72330295 None:intergenic 35.0%
!!! TCACGCTGATTTGGATTTTG+AGG + chr8_1:72328064-72328083 None:intergenic 40.0%
ATATTTACAGGGGGCAAAAC+CGG + chr8_1:72328174-72328193 None:intergenic 40.0%
!! TGGTTTTTGTTTGGCCTACT+AGG - chr8_1:72328292-72328311 Msa1212440:CDS 40.0%
!! GGTTTTTGTTTGGCCTACTA+GGG - chr8_1:72328293-72328312 Msa1212440:CDS 40.0%
!! GTTTTTGTTTGGCCTACTAG+GGG - chr8_1:72328294-72328313 Msa1212440:CDS 40.0%
!! TTTTTGTTTGGCCTACTAGG+GGG - chr8_1:72328295-72328314 Msa1212440:CDS 40.0%
!!! GTTTTGATTTACCCCCTAGT+AGG + chr8_1:72328309-72328328 None:intergenic 40.0%
GCTGCATGGTGAAAGAAAAA+TGG + chr8_1:72328422-72328441 None:intergenic 40.0%
GTCACTATCTTGGATGGTAA+TGG + chr8_1:72328487-72328506 None:intergenic 40.0%
! TAGAGTGTCACTATCTTGGA+TGG + chr8_1:72328493-72328512 None:intergenic 40.0%
! GACTTAGAGTGTCACTATCT+TGG + chr8_1:72328497-72328516 None:intergenic 40.0%
! TGACTAAACTGGGAAGCTTT+TGG - chr8_1:72328594-72328613 Msa1212440:CDS 40.0%
! AATCTCTTCCTTGGCTTTCT+TGG + chr8_1:72328624-72328643 None:intergenic 40.0%
TGTGAAGCAGAACATGAACT+AGG - chr8_1:72328902-72328921 Msa1212440:intron 40.0%
TCAGTATGAGCCTTTACTCT+TGG - chr8_1:72329117-72329136 Msa1212440:CDS 40.0%
! GCAACTTTGGGAAAATTAGG+GGG + chr8_1:72329332-72329351 None:intergenic 40.0%
! CGCAACTTTGGGAAAATTAG+GGG + chr8_1:72329333-72329352 None:intergenic 40.0%
!!! GGTGCCACGTGTTATTTTTT+TGG - chr8_1:72329471-72329490 Msa1212440:intron 40.0%
!!! GTTATTTTTTTGGCCTTGGG+GGG - chr8_1:72329481-72329500 Msa1212440:intron 40.0%
CTGCTACAGTTGCAAAACTT+AGG - chr8_1:72329510-72329529 Msa1212440:intron 40.0%
GCTACAGTTGCAAAACTTAG+GGG - chr8_1:72329512-72329531 Msa1212440:intron 40.0%
CTACAGTTGCAAAACTTAGG+GGG - chr8_1:72329513-72329532 Msa1212440:intron 40.0%
! CTTTCACGAAGTTGCGATTT+TGG + chr8_1:72329567-72329586 None:intergenic 40.0%
ATCGCAACTTCGTGAAAGTT+AGG - chr8_1:72329569-72329588 Msa1212440:intron 40.0%
TCGCAACTTCGTGAAAGTTA+GGG - chr8_1:72329570-72329589 Msa1212440:intron 40.0%
CGTAGCATGTTATATTACGG+GGG + chr8_1:72329821-72329840 None:intergenic 40.0%
CGTCAAAGGAACATTGTCAA+AGG - chr8_1:72329935-72329954 Msa1212440:intron 40.0%
AAAGTATGGTTCACTACCAC+TGG - chr8_1:72330047-72330066 Msa1212440:intron 40.0%
CCTTGATTTCTTAACACCAG+TGG + chr8_1:72330066-72330085 None:intergenic 40.0%
! CCACTGGTGTTAAGAAATCA+AGG - chr8_1:72330063-72330082 Msa1212440:intron 40.0%
GGCATTTCATAGGCATCTTT+AGG + chr8_1:72330089-72330108 None:intergenic 40.0%
TGCACATGTTACATTGTGAC+CGG - chr8_1:72330254-72330273 Msa1212440:intron 40.0%
!!! TCACGCTGATTTGGATTTTG+AGG + chr8_1:72328064-72328083 None:intergenic 40.0%
ATATTTACAGGGGGCAAAAC+CGG + chr8_1:72328174-72328193 None:intergenic 40.0%
!! TGGTTTTTGTTTGGCCTACT+AGG - chr8_1:72328292-72328311 Msa1212440:CDS 40.0%
!! GGTTTTTGTTTGGCCTACTA+GGG - chr8_1:72328293-72328312 Msa1212440:CDS 40.0%
!! GTTTTTGTTTGGCCTACTAG+GGG - chr8_1:72328294-72328313 Msa1212440:CDS 40.0%
!! TTTTTGTTTGGCCTACTAGG+GGG - chr8_1:72328295-72328314 Msa1212440:CDS 40.0%
!!! GTTTTGATTTACCCCCTAGT+AGG + chr8_1:72328309-72328328 None:intergenic 40.0%
GCTGCATGGTGAAAGAAAAA+TGG + chr8_1:72328422-72328441 None:intergenic 40.0%
GTCACTATCTTGGATGGTAA+TGG + chr8_1:72328487-72328506 None:intergenic 40.0%
! TAGAGTGTCACTATCTTGGA+TGG + chr8_1:72328493-72328512 None:intergenic 40.0%
! GACTTAGAGTGTCACTATCT+TGG + chr8_1:72328497-72328516 None:intergenic 40.0%
! TGACTAAACTGGGAAGCTTT+TGG - chr8_1:72328594-72328613 Msa1212440:CDS 40.0%
! AATCTCTTCCTTGGCTTTCT+TGG + chr8_1:72328624-72328643 None:intergenic 40.0%
TGTGAAGCAGAACATGAACT+AGG - chr8_1:72328902-72328921 Msa1212440:intron 40.0%
TCAGTATGAGCCTTTACTCT+TGG - chr8_1:72329117-72329136 Msa1212440:CDS 40.0%
! GCAACTTTGGGAAAATTAGG+GGG + chr8_1:72329332-72329351 None:intergenic 40.0%
! CGCAACTTTGGGAAAATTAG+GGG + chr8_1:72329333-72329352 None:intergenic 40.0%
!!! GGTGCCACGTGTTATTTTTT+TGG - chr8_1:72329471-72329490 Msa1212440:intron 40.0%
!!! GTTATTTTTTTGGCCTTGGG+GGG - chr8_1:72329481-72329500 Msa1212440:intron 40.0%
CTGCTACAGTTGCAAAACTT+AGG - chr8_1:72329510-72329529 Msa1212440:intron 40.0%
GCTACAGTTGCAAAACTTAG+GGG - chr8_1:72329512-72329531 Msa1212440:intron 40.0%
CTACAGTTGCAAAACTTAGG+GGG - chr8_1:72329513-72329532 Msa1212440:intron 40.0%
! CTTTCACGAAGTTGCGATTT+TGG + chr8_1:72329567-72329586 None:intergenic 40.0%
ATCGCAACTTCGTGAAAGTT+AGG - chr8_1:72329569-72329588 Msa1212440:intron 40.0%
TCGCAACTTCGTGAAAGTTA+GGG - chr8_1:72329570-72329589 Msa1212440:intron 40.0%
CGTAGCATGTTATATTACGG+GGG + chr8_1:72329821-72329840 None:intergenic 40.0%
CGTCAAAGGAACATTGTCAA+AGG - chr8_1:72329935-72329954 Msa1212440:intron 40.0%
AAAGTATGGTTCACTACCAC+TGG - chr8_1:72330047-72330066 Msa1212440:intron 40.0%
CCTTGATTTCTTAACACCAG+TGG + chr8_1:72330066-72330085 None:intergenic 40.0%
! CCACTGGTGTTAAGAAATCA+AGG - chr8_1:72330063-72330082 Msa1212440:intron 40.0%
GGCATTTCATAGGCATCTTT+AGG + chr8_1:72330089-72330108 None:intergenic 40.0%
TGCACATGTTACATTGTGAC+CGG - chr8_1:72330254-72330273 Msa1212440:intron 40.0%
CGTACGCTGCATAACAAATC+AGG + chr8_1:72328451-72328470 None:intergenic 45.0%
TTGGATCTCCAAGAAAGCCA+AGG - chr8_1:72328613-72328632 Msa1212440:intron 45.0%
GAGACTCACAGATAAGTCGT+CGG + chr8_1:72328657-72328676 None:intergenic 45.0%
CAGAACATGAACTAGGCAAC+TGG - chr8_1:72328909-72328928 Msa1212440:intron 45.0%
GAGGCCAAAATCGCAACTTT+GGG + chr8_1:72329344-72329363 None:intergenic 45.0%
TGCCACATGTGCAAACCTTA+GGG + chr8_1:72329393-72329412 None:intergenic 45.0%
! GTTTGCACATGTGGCAGTTT+TGG - chr8_1:72329397-72329416 Msa1212440:intron 45.0%
!! ACCGAGTCAAAATTGGCCTT+GGG + chr8_1:72329425-72329444 None:intergenic 45.0%
AGCGTAGACCGAGTCAAAAT+TGG + chr8_1:72329432-72329451 None:intergenic 45.0%
!!! AATTTTGACTCGGTCTACGC+TGG - chr8_1:72329431-72329450 Msa1212440:intron 45.0%
CGCAACTTCGTGAAAGTTAG+GGG - chr8_1:72329571-72329590 Msa1212440:intron 45.0%
ATATTACGGGGGAACATACC+TGG + chr8_1:72329810-72329829 None:intergenic 45.0%
CTTGAAGCATACCTCAGAAG+GGG + chr8_1:72329886-72329905 None:intergenic 45.0%
CCTTGAAGCATACCTCAGAA+GGG + chr8_1:72329887-72329906 None:intergenic 45.0%
TCCTTGAAGCATACCTCAGA+AGG + chr8_1:72329888-72329907 None:intergenic 45.0%
TGAAGACCAAGGTTCTTGTG+TGG - chr8_1:72329982-72330001 Msa1212440:intron 45.0%
GAAGACCAAGGTTCTTGTGT+GGG - chr8_1:72329983-72330002 Msa1212440:intron 45.0%
CTTAACCCACACAAGAACCT+TGG + chr8_1:72329991-72330010 None:intergenic 45.0%
! CAAGGTTCTTGTGTGGGTTA+AGG - chr8_1:72329989-72330008 Msa1212440:intron 45.0%
! AGCTTCACGAGGCATTTCAT+AGG + chr8_1:72330099-72330118 None:intergenic 45.0%
AATGCCTCGTGAAGCTGTTA+AGG - chr8_1:72330103-72330122 Msa1212440:intron 45.0%
CGTACGCTGCATAACAAATC+AGG + chr8_1:72328451-72328470 None:intergenic 45.0%
TTGGATCTCCAAGAAAGCCA+AGG - chr8_1:72328613-72328632 Msa1212440:intron 45.0%
GAGACTCACAGATAAGTCGT+CGG + chr8_1:72328657-72328676 None:intergenic 45.0%
CAGAACATGAACTAGGCAAC+TGG - chr8_1:72328909-72328928 Msa1212440:intron 45.0%
GAGGCCAAAATCGCAACTTT+GGG + chr8_1:72329344-72329363 None:intergenic 45.0%
TGCCACATGTGCAAACCTTA+GGG + chr8_1:72329393-72329412 None:intergenic 45.0%
! GTTTGCACATGTGGCAGTTT+TGG - chr8_1:72329397-72329416 Msa1212440:intron 45.0%
!! ACCGAGTCAAAATTGGCCTT+GGG + chr8_1:72329425-72329444 None:intergenic 45.0%
AGCGTAGACCGAGTCAAAAT+TGG + chr8_1:72329432-72329451 None:intergenic 45.0%
!!! AATTTTGACTCGGTCTACGC+TGG - chr8_1:72329431-72329450 Msa1212440:intron 45.0%
CGCAACTTCGTGAAAGTTAG+GGG - chr8_1:72329571-72329590 Msa1212440:intron 45.0%
ATATTACGGGGGAACATACC+TGG + chr8_1:72329810-72329829 None:intergenic 45.0%
CTTGAAGCATACCTCAGAAG+GGG + chr8_1:72329886-72329905 None:intergenic 45.0%
CCTTGAAGCATACCTCAGAA+GGG + chr8_1:72329887-72329906 None:intergenic 45.0%
TCCTTGAAGCATACCTCAGA+AGG + chr8_1:72329888-72329907 None:intergenic 45.0%
TGAAGACCAAGGTTCTTGTG+TGG - chr8_1:72329982-72330001 Msa1212440:intron 45.0%
GAAGACCAAGGTTCTTGTGT+GGG - chr8_1:72329983-72330002 Msa1212440:intron 45.0%
CTTAACCCACACAAGAACCT+TGG + chr8_1:72329991-72330010 None:intergenic 45.0%
! CAAGGTTCTTGTGTGGGTTA+AGG - chr8_1:72329989-72330008 Msa1212440:intron 45.0%
! AGCTTCACGAGGCATTTCAT+AGG + chr8_1:72330099-72330118 None:intergenic 45.0%
AATGCCTCGTGAAGCTGTTA+AGG - chr8_1:72330103-72330122 Msa1212440:intron 45.0%
!! CTTAAAAAATAAAATAAAAT+TGG - chr8_1:72328272-72328291 Msa1212440:CDS 5.0%
!! CTTAAAAAATAAAATAAAAT+TGG - chr8_1:72328272-72328291 Msa1212440:CDS 5.0%
AAATCAGGACGTACGCTGCA+TGG + chr8_1:72328436-72328455 None:intergenic 50.0%
GGAGGCCAAAATCGCAACTT+TGG + chr8_1:72329345-72329364 None:intergenic 50.0%
AACTACAAAACCGCCCCCTA+AGG - chr8_1:72329375-72329394 Msa1212440:intron 50.0%
CCACATGTGCAAACCTTAGG+GGG + chr8_1:72329391-72329410 None:intergenic 50.0%
GCCACATGTGCAAACCTTAG+GGG + chr8_1:72329392-72329411 None:intergenic 50.0%
CTGCCACATGTGCAAACCTT+AGG + chr8_1:72329394-72329413 None:intergenic 50.0%
!! CGAGTCAAAATTGGCCTTGG+GGG + chr8_1:72329423-72329442 None:intergenic 50.0%
!! CCGAGTCAAAATTGGCCTTG+GGG + chr8_1:72329424-72329443 None:intergenic 50.0%
!!! CCCCAAGGCCAATTTTGACT+CGG - chr8_1:72329421-72329440 Msa1212440:intron 50.0%
! GACCGAGTCAAAATTGGCCT+TGG + chr8_1:72329426-72329445 None:intergenic 50.0%
AACACGTGGCACCTCACTTA+GGG + chr8_1:72329464-72329483 None:intergenic 50.0%
TAACACGTGGCACCTCACTT+AGG + chr8_1:72329465-72329484 None:intergenic 50.0%
CAGTTGCAAAACTTAGGGGG+CGG - chr8_1:72329516-72329535 Msa1212440:intron 50.0%
TTGTGCTCCCTAAGGAGATC+TGG + chr8_1:72329780-72329799 None:intergenic 50.0%
!! CCCTTCTGAGGTATGCTTCA+AGG - chr8_1:72329884-72329903 Msa1212440:five_prime_UTR 50.0%
TCCACCTTAACAGCTTCACG+AGG + chr8_1:72330110-72330129 None:intergenic 50.0%
AAATCAGGACGTACGCTGCA+TGG + chr8_1:72328436-72328455 None:intergenic 50.0%
GGAGGCCAAAATCGCAACTT+TGG + chr8_1:72329345-72329364 None:intergenic 50.0%
AACTACAAAACCGCCCCCTA+AGG - chr8_1:72329375-72329394 Msa1212440:intron 50.0%
CCACATGTGCAAACCTTAGG+GGG + chr8_1:72329391-72329410 None:intergenic 50.0%
GCCACATGTGCAAACCTTAG+GGG + chr8_1:72329392-72329411 None:intergenic 50.0%
CTGCCACATGTGCAAACCTT+AGG + chr8_1:72329394-72329413 None:intergenic 50.0%
!! CGAGTCAAAATTGGCCTTGG+GGG + chr8_1:72329423-72329442 None:intergenic 50.0%
!! CCGAGTCAAAATTGGCCTTG+GGG + chr8_1:72329424-72329443 None:intergenic 50.0%
!!! CCCCAAGGCCAATTTTGACT+CGG - chr8_1:72329421-72329440 Msa1212440:intron 50.0%
! GACCGAGTCAAAATTGGCCT+TGG + chr8_1:72329426-72329445 None:intergenic 50.0%
AACACGTGGCACCTCACTTA+GGG + chr8_1:72329464-72329483 None:intergenic 50.0%
TAACACGTGGCACCTCACTT+AGG + chr8_1:72329465-72329484 None:intergenic 50.0%
CAGTTGCAAAACTTAGGGGG+CGG - chr8_1:72329516-72329535 Msa1212440:intron 50.0%
TTGTGCTCCCTAAGGAGATC+TGG + chr8_1:72329780-72329799 None:intergenic 50.0%
!! CCCTTCTGAGGTATGCTTCA+AGG - chr8_1:72329884-72329903 Msa1212440:five_prime_UTR 50.0%
TCCACCTTAACAGCTTCACG+AGG + chr8_1:72330110-72330129 None:intergenic 50.0%
CATGTGCAAACCTTAGGGGG+CGG + chr8_1:72329388-72329407 None:intergenic 55.0%
CCCCCTAAGGTTTGCACATG+TGG - chr8_1:72329388-72329407 Msa1212440:intron 55.0%
GAGGAAGGTTGTGCTCCCTA+AGG + chr8_1:72329788-72329807 None:intergenic 55.0%
TTACGGGGGAACATACCTGG+AGG + chr8_1:72329807-72329826 None:intergenic 55.0%
GCATTTGTCCTCCCCTTCTG+AGG - chr8_1:72329872-72329891 Msa1212440:five_prime_UTR 55.0%
GAAGCATACCTCAGAAGGGG+AGG + chr8_1:72329883-72329902 None:intergenic 55.0%
GCCTCGTGAAGCTGTTAAGG+TGG - chr8_1:72330106-72330125 Msa1212440:intron 55.0%
CATGTGCAAACCTTAGGGGG+CGG + chr8_1:72329388-72329407 None:intergenic 55.0%
CCCCCTAAGGTTTGCACATG+TGG - chr8_1:72329388-72329407 Msa1212440:intron 55.0%
GAGGAAGGTTGTGCTCCCTA+AGG + chr8_1:72329788-72329807 None:intergenic 55.0%
TTACGGGGGAACATACCTGG+AGG + chr8_1:72329807-72329826 None:intergenic 55.0%
GCATTTGTCCTCCCCTTCTG+AGG - chr8_1:72329872-72329891 Msa1212440:five_prime_UTR 55.0%
GAAGCATACCTCAGAAGGGG+AGG + chr8_1:72329883-72329902 None:intergenic 55.0%
GCCTCGTGAAGCTGTTAAGG+TGG - chr8_1:72330106-72330125 Msa1212440:intron 55.0%
!! TGTGGCAGTTTTGGCCCCCA+AGG - chr8_1:72329406-72329425 Msa1212440:intron 60.0%
!! GTAGCAGTTTTGGCCCCCCA+AGG + chr8_1:72329497-72329516 None:intergenic 60.0%
! AGGGAGCACAACCTTCCTCC+AGG - chr8_1:72329789-72329808 Msa1212440:exon 60.0%
GGGGGAACATACCTGGAGGA+AGG + chr8_1:72329803-72329822 None:intergenic 60.0%
!! TGTGGCAGTTTTGGCCCCCA+AGG - chr8_1:72329406-72329425 Msa1212440:intron 60.0%
!! GTAGCAGTTTTGGCCCCCCA+AGG + chr8_1:72329497-72329516 None:intergenic 60.0%
! AGGGAGCACAACCTTCCTCC+AGG - chr8_1:72329789-72329808 Msa1212440:exon 60.0%
GGGGGAACATACCTGGAGGA+AGG + chr8_1:72329803-72329822 None:intergenic 60.0%
!! TGACTCGGTCTACGCTGGCG+TGG - chr8_1:72329436-72329455 Msa1212440:intron 65.0%
CTGGCGTGGCACCCTAAGTG+AGG - chr8_1:72329450-72329469 Msa1212440:intron 65.0%
!! TGACTCGGTCTACGCTGGCG+TGG - chr8_1:72329436-72329455 Msa1212440:intron 65.0%
CTGGCGTGGCACCCTAAGTG+AGG - chr8_1:72329450-72329469 Msa1212440:intron 65.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 72327996 72330381 72327996 ID=Msa1212440;Name=Msa1212440
chr8_1 mRNA 72327996 72330381 72327996 ID=Msa1212440-mRNA-1;Parent=Msa1212440;Name=Msa1212440-mRNA-1;_AED=0.01;_eAED=0.01;_QI=224|1|1|1|0.66|0.5|4|242|174
chr8_1 exon 72327996 72328620 72327996 ID=Msa1212440-mRNA-1:exon:24403;Parent=Msa1212440-mRNA-1
chr8_1 exon 72329086 72329140 72329086 ID=Msa1212440-mRNA-1:exon:24402;Parent=Msa1212440-mRNA-1
chr8_1 exon 72329710 72329936 72329710 ID=Msa1212440-mRNA-1:exon:24401;Parent=Msa1212440-mRNA-1
chr8_1 exon 72330298 72330381 72330298 ID=Msa1212440-mRNA-1:exon:24400;Parent=Msa1212440-mRNA-1
chr8_1 five_prime_UTR 72330298 72330381 72330298 ID=Msa1212440-mRNA-1:five_prime_utr;Parent=Msa1212440-mRNA-1
chr8_1 five_prime_UTR 72329797 72329936 72329797 ID=Msa1212440-mRNA-1:five_prime_utr;Parent=Msa1212440-mRNA-1
chr8_1 CDS 72329710 72329796 72329710 ID=Msa1212440-mRNA-1:cds;Parent=Msa1212440-mRNA-1
chr8_1 CDS 72329086 72329140 72329086 ID=Msa1212440-mRNA-1:cds;Parent=Msa1212440-mRNA-1
chr8_1 CDS 72328238 72328620 72328238 ID=Msa1212440-mRNA-1:cds;Parent=Msa1212440-mRNA-1
chr8_1 three_prime_UTR 72327996 72328237 72327996 ID=Msa1212440-mRNA-1:three_prime_utr;Parent=Msa1212440-mRNA-1
Gene Sequence

>Msa1212440

ATGGATAAAGCTATGACTAAACTGGGAAGCTTTTGGATCTCCAAGAAAGCCAAGGAAGAGATTTCTCACATAACCGACGACTTATCTTCTCTCTCAAATACTGTTGAAGACAAGGCGAAACTTTTCATCAACAAGCTCAAAGGAAAAACTCAGAAATCATTACCAGATCTCCTTAGGGAGCACAACCTTCCTCCAGGTATGTTCCCCCGTAATATAACATGCTACGAGTTTGATGAATCAAAAGGAAAGTTGATGGTGCATTTGTCCTCCCCTTCTGAGGTATGCTTCAAGGACTCGTCTATTGTGAGATATTCAAATCGCGTCAAAGGAACATTGTCAAAGGGAAAACTCATTGTTATAGATGGAATGAAGACCAAGGTTCTTGTGTGGGTTAAGGTTACTAGTGTTTATGTTGAGAGTTATAAGTCTGACAAAGTATGGTTCACTACCACTGGTGTTAAGAAATCAAGGCCTAAAGATGCCTATGAAATGCCTCGTGAAGCTGTTAAGGTGGAAGATTATTGA
Protein sequence

>Msa1212440

MDKAMTKLGSFWISKKAKEEISHITDDLSSLSNTVEDKAKLFINKLKGKTQKSLPDLLREHNLPPGMFPRNITCYEFDESKGKLMVHLSSPSEVCFKDSSIVRYSNRVKGTLSKGKLIVIDGMKTKVLVWVKVTSVYVESYKSDKVWFTTTGVKKSRPKDAYEMPREAVKVEDY*