AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1260040

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1260040 MtrunA17_Chr4g0061181 98.276 174 3 0 1 174 1 174 1.24e-125 350
Msa1260040 MtrunA17_Chr5g0418311 64.088 181 57 2 1 174 1 180 4.61e-81 238
Msa1260040 MtrunA17_Chr4g0005561 46.552 174 89 1 1 174 1 170 1.17e-55 173
Msa1260040 MtrunA17_Chr7g0243261 47.701 174 87 1 1 174 1 170 9.39e-55 171
Msa1260040 MtrunA17_Chr8g0378501 32.500 120 73 5 49 163 22 138 5.53e-12 60.8
Msa1260040 MtrunA17_Chr4g0048871 34.831 89 55 2 51 138 28 114 5.68e-12 60.8
Msa1260040 MtrunA17_Chr4g0048861 33.333 108 67 4 41 146 17 121 1.99e-11 59.3
Msa1260040 MtrunA17_Chr7g0234601 29.060 117 79 3 56 171 38 151 3.20e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1260040 AT2G03350.1 65.909 176 54 2 1 171 1 175 3.99e-79 233
Msa1260040 AT5G37070.1 49.425 174 84 2 1 174 1 170 7.49e-57 176
Msa1260040 AT3G08890.1 48.851 174 85 2 1 174 1 170 1.15e-55 173
Msa1260040 AT3G08890.2 48.851 174 85 2 1 174 1 170 1.15e-55 173
Msa1260040 AT5G01610.2 46.552 174 89 2 1 174 1 170 4.35e-53 167
Msa1260040 AT5G01610.1 46.552 174 89 2 1 174 1 170 4.35e-53 167
Msa1260040 AT1G61667.1 30.894 123 70 4 50 165 18 132 5.83e-12 60.8
Msa1260040 AT1G61667.2 30.894 123 70 4 50 165 54 168 1.16e-11 60.8
Msa1260040 AT5G16380.1 25.185 135 98 2 39 172 16 148 1.66e-11 60.5

Find 57 sgRNAs with CRISPR-Local

Find 343 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATCTCTTCCTTGGCTTTCT+TGG 0.159151 8_2:+61905054 None:intergenic
TAAAATTTCTCACGTTGATT+TGG 0.251703 8_2:+61905578 None:intergenic
GGATAAAGCTATGACTAAAC+TGG 0.259672 8_2:-61905092 Msa1260040:CDS
TGACTAAACTGGGAAGCTTT+TGG 0.282276 8_2:-61905081 Msa1260040:CDS
TCAGTGTTTATTAGTGTGTT+AGG 0.317795 8_2:-61903373 Msa1260040:three_prime_UTR
ATTTGTATGTGTGACTTTAG+AGG 0.325150 8_2:-61903491 Msa1260040:three_prime_UTR
GGAAAACTCATTGTTATAGA+TGG 0.353422 8_2:-61903728 Msa1260040:CDS
CAAGGTTCTTGTGTGGGTTA+AGG 0.357016 8_2:-61903696 Msa1260040:CDS
CCCTTCTGAGGTATGCTTCA+AGG 0.368099 8_2:-61903801 Msa1260040:CDS
CACACACCATTTGTGGAGAT+TGG 0.371485 8_2:-61905666 None:intergenic
AATCATTACCAGATCTCCTT+AGG 0.387760 8_2:-61903916 Msa1260040:CDS
AGTCATCAGAGAAGAAGATT+TGG 0.392753 8_2:+61903326 None:intergenic
CTCGTAGCATGTTATATTAC+GGG 0.393055 8_2:+61903865 None:intergenic
GACTTAGAGTGTCACTATCT+TGG 0.406177 8_2:+61905181 None:intergenic
ACTCGTAGCATGTTATATTA+CGG 0.409672 8_2:+61903864 None:intergenic
GTTATAAGTCTGACAAAGTA+TGG 0.416428 8_2:-61903652 Msa1260040:CDS
AGCTTCACGAGGCATTTCAT+AGG 0.419952 8_2:+61903589 None:intergenic
GGCATTTCATAGGCATCTTT+AGG 0.420736 8_2:+61903599 None:intergenic
TATGTGAGAAATCTCTTCCT+TGG 0.429865 8_2:+61905045 None:intergenic
CAAACACAGTTCTTAACAAC+CGG 0.443114 8_2:+61903412 None:intergenic
TTATTGATTCTAATGAATAT+AGG 0.457291 8_2:-61903552 Msa1260040:exon
TTGTGCTCCCTAAGGAGATC+TGG 0.464745 8_2:+61903908 None:intergenic
CGTACGCTGCATAACAAATC+AGG 0.478326 8_2:+61905227 None:intergenic
CAGAACAGAACACTTATTCA+TGG 0.490170 8_2:+61905619 None:intergenic
TATGATGATGATGATATAGT+TGG 0.498451 8_2:-61903460 Msa1260040:three_prime_UTR
AATGCCTCGTGAAGCTGTTA+AGG 0.503909 8_2:-61903582 Msa1260040:CDS
TACGAGTTTGATGAATCAAA+AGG 0.504698 8_2:-61903848 Msa1260040:CDS
CCACTGGTGTTAAGAAATCA+AGG 0.511551 8_2:-61903622 Msa1260040:CDS
TCCTTGAAGCATACCTCAGA+AGG 0.512000 8_2:+61903800 None:intergenic
GTCACTATCTTGGATGGTAA+AGG 0.521485 8_2:+61905191 None:intergenic
AAAGTATGGTTCACTACCAC+TGG 0.534576 8_2:-61903638 Msa1260040:CDS
ATCATTACCAGATCTCCTTA+GGG 0.537160 8_2:-61903915 Msa1260040:CDS
TGAATCAAAAGGAAAGTTGA+TGG 0.539969 8_2:-61903837 Msa1260040:CDS
CGTCAAAGGAACATTGTCAA+AGG 0.540806 8_2:-61903750 Msa1260040:CDS
AGATATTCAAATCGCGTCAA+AGG 0.541661 8_2:-61903764 Msa1260040:CDS
GTCAAAGGAACATTGTCAAA+GGG 0.541892 8_2:-61903749 Msa1260040:CDS
GCATTTGTCCTCCCCTTCTG+AGG 0.542896 8_2:-61903813 Msa1260040:CDS
AGGGAGCACAACCTTCCTCC+AGG 0.554985 8_2:-61903896 Msa1260040:CDS
CTCAAATACTGTTGAAGACA+AGG 0.560814 8_2:-61904423 Msa1260040:CDS
GAGGAAGGTTGTGCTCCCTA+AGG 0.561252 8_2:+61903900 None:intergenic
GAAGACCAAGGTTCTTGTGT+GGG 0.583305 8_2:-61903702 Msa1260040:CDS
TGCACATGTTACATTGTGAC+CGG 0.583605 8_2:-61903431 Msa1260040:three_prime_UTR
CTTAACCCACACAAGAACCT+TGG 0.584699 8_2:+61903697 None:intergenic
GATAAAGCTATGACTAAACT+GGG 0.587036 8_2:-61905091 Msa1260040:CDS
TAGAGTGTCACTATCTTGGA+TGG 0.598900 8_2:+61905185 None:intergenic
CCTTGATTTCTTAACACCAG+TGG 0.601105 8_2:+61903622 None:intergenic
GCCTCGTGAAGCTGTTAAGG+TGG 0.601228 8_2:-61903579 Msa1260040:CDS
TTGGATCTCCAAGAAAGCCA+AGG 0.613343 8_2:-61905062 Msa1260040:CDS
TGAAGACCAAGGTTCTTGTG+TGG 0.616802 8_2:-61903703 Msa1260040:CDS
CCTTGAAGCATACCTCAGAA+GGG 0.625952 8_2:+61903801 None:intergenic
GAAGCATACCTCAGAAGGGG+AGG 0.636659 8_2:+61903805 None:intergenic
TCGTAGCATGTTATATTACG+GGG 0.641980 8_2:+61903866 None:intergenic
CTTGAAGCATACCTCAGAAG+GGG 0.649660 8_2:+61903802 None:intergenic
TCCACCTTAACAGCTTCACG+AGG 0.680099 8_2:+61903578 None:intergenic
GAGACTCACAGATAAGTCGT+CGG 0.681263 8_2:+61905021 None:intergenic
CGTAGCATGTTATATTACGG+GGG 0.700332 8_2:+61903867 None:intergenic
TATAGATGGAATGAAGACCA+AGG 0.710812 8_2:-61903714 Msa1260040:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAACAAAAAAAATTTATAG+GGG + chr8_2:61903505-61903524 None:intergenic 10.0%
!! CAAAACAAAAAAAATTTATA+GGG + chr8_2:61903506-61903525 None:intergenic 10.0%
!! TCAAAACAAAAAAAATTTAT+AGG + chr8_2:61903507-61903526 None:intergenic 10.0%
!! CTTGAAAAATAAAATAAAAT+TGG - chr8_2:61903563-61903582 Msa1260040:exon 10.0%
!! AAATTCAAGATTTAAATATA+TGG + chr8_2:61904018-61904037 None:intergenic 10.0%
!! AAAACAAAAAAAATTTATAG+GGG + chr8_2:61903505-61903524 None:intergenic 10.0%
!! CAAAACAAAAAAAATTTATA+GGG + chr8_2:61903506-61903525 None:intergenic 10.0%
!! TCAAAACAAAAAAAATTTAT+AGG + chr8_2:61903507-61903526 None:intergenic 10.0%
!! CTTGAAAAATAAAATAAAAT+TGG - chr8_2:61903563-61903582 Msa1260040:exon 10.0%
!! AAATTCAAGATTTAAATATA+TGG + chr8_2:61904018-61904037 None:intergenic 10.0%
!! AAACAAAAAAAATTTATAGG+GGG + chr8_2:61903504-61903523 None:intergenic 15.0%
!!! AAATAAAATTGGTTTTTGTT+TGG - chr8_2:61903574-61903593 Msa1260040:CDS 15.0%
!! ATCAAAACAAAAAAATTTAC+AGG - chr8_2:61903612-61903631 Msa1260040:CDS 15.0%
!! TCAAAACAAAAAAATTTACA+GGG - chr8_2:61903613-61903632 Msa1260040:CDS 15.0%
!! GAAAGAAATGAATATAAAAA+TGG + chr8_2:61903831-61903850 None:intergenic 15.0%
!!! TTTTTTAGTTATGTCAATTT+TGG - chr8_2:61904046-61904065 Msa1260040:intron 15.0%
!! AATGATATAATGAGAATTAA+GGG - chr8_2:61904289-61904308 Msa1260040:intron 15.0%
!!! TTTTGTAGTTTTTTTTTCTT+CGG + chr8_2:61904669-61904688 None:intergenic 15.0%
!!! TTTTGTAGTTTTTTTTCTTA+GGG - chr8_2:61904823-61904842 Msa1260040:intron 15.0%
!!! TTATTGATTCTAATGAATAT+AGG - chr8_2:61905416-61905435 Msa1260040:intron 15.0%
!! AAACAAAAAAAATTTATAGG+GGG + chr8_2:61903504-61903523 None:intergenic 15.0%
!!! AAATAAAATTGGTTTTTGTT+TGG - chr8_2:61903574-61903593 Msa1260040:CDS 15.0%
!! ATCAAAACAAAAAAATTTAC+AGG - chr8_2:61903612-61903631 Msa1260040:CDS 15.0%
!! TCAAAACAAAAAAATTTACA+GGG - chr8_2:61903613-61903632 Msa1260040:CDS 15.0%
!! GAAAGAAATGAATATAAAAA+TGG + chr8_2:61903831-61903850 None:intergenic 15.0%
!!! TTTTTTAGTTATGTCAATTT+TGG - chr8_2:61904046-61904065 Msa1260040:intron 15.0%
!! AATGATATAATGAGAATTAA+GGG - chr8_2:61904289-61904308 Msa1260040:intron 15.0%
!!! TTTTGTAGTTTTTTTTTCTT+CGG + chr8_2:61904669-61904688 None:intergenic 15.0%
!!! TTTTGTAGTTTTTTTTCTTA+GGG - chr8_2:61904823-61904842 Msa1260040:intron 15.0%
!!! TTATTGATTCTAATGAATAT+AGG - chr8_2:61905416-61905435 Msa1260040:intron 15.0%
!!! TTTTCCCTTTTGTTTAATTT+TGG - chr8_2:61903431-61903450 Msa1260040:three_prime_UTR 20.0%
!!! TTTCCCTTTTGTTTAATTTT+GGG - chr8_2:61903432-61903451 Msa1260040:three_prime_UTR 20.0%
!! TAACCCAAAATTAAACAAAA+GGG + chr8_2:61903438-61903457 None:intergenic 20.0%
!! TTAACCCAAAATTAAACAAA+AGG + chr8_2:61903439-61903458 None:intergenic 20.0%
!!! TTGTTTAATTTTGGGTTAAT+AGG - chr8_2:61903440-61903459 Msa1260040:three_prime_UTR 20.0%
!! AACAAAAAAAATTTATAGGG+GGG + chr8_2:61903503-61903522 None:intergenic 20.0%
!!! AAGAAATTTTCGTTTTTGTT+TGG + chr8_2:61903546-61903565 None:intergenic 20.0%
!! CAAAACAAAAAAATTTACAG+GGG - chr8_2:61903614-61903633 Msa1260040:CDS 20.0%
!!! TTCTTTACCTTGTAAATTTT+CGG + chr8_2:61903645-61903664 None:intergenic 20.0%
!!! ATTAACCCTTTAATTTTCAT+TGG - chr8_2:61903667-61903686 Msa1260040:CDS 20.0%
!! AAACTCCAATGAAAATTAAA+GGG + chr8_2:61903675-61903694 None:intergenic 20.0%
!! TAAACTCCAATGAAAATTAA+AGG + chr8_2:61903676-61903695 None:intergenic 20.0%
!!! TTATGTCAATTTTGGATAAT+TGG - chr8_2:61904054-61904073 Msa1260040:intron 20.0%
!! CAATGATATAATGAGAATTA+AGG - chr8_2:61904288-61904307 Msa1260040:intron 20.0%
!! ATGATATAATGAGAATTAAG+GGG - chr8_2:61904290-61904309 Msa1260040:intron 20.0%
!!! TTTGTAGTTTTTTTTTCTTC+GGG + chr8_2:61904668-61904687 None:intergenic 20.0%
!!! GTTTTGTAGTTTTTTTTCTT+AGG - chr8_2:61904822-61904841 Msa1260040:intron 20.0%
!!! TTTGTAGTTTTTTTTCTTAG+GGG - chr8_2:61904824-61904843 Msa1260040:intron 20.0%
!! CTGCAAATATGTTAAAAAAA+TGG + chr8_2:61904899-61904918 None:intergenic 20.0%
!!! TTTTCCCTTTTGTTTAATTT+TGG - chr8_2:61903431-61903450 Msa1260040:three_prime_UTR 20.0%
!!! TTTCCCTTTTGTTTAATTTT+GGG - chr8_2:61903432-61903451 Msa1260040:three_prime_UTR 20.0%
!! TAACCCAAAATTAAACAAAA+GGG + chr8_2:61903438-61903457 None:intergenic 20.0%
!! TTAACCCAAAATTAAACAAA+AGG + chr8_2:61903439-61903458 None:intergenic 20.0%
!!! TTGTTTAATTTTGGGTTAAT+AGG - chr8_2:61903440-61903459 Msa1260040:three_prime_UTR 20.0%
!! AACAAAAAAAATTTATAGGG+GGG + chr8_2:61903503-61903522 None:intergenic 20.0%
!!! AAGAAATTTTCGTTTTTGTT+TGG + chr8_2:61903546-61903565 None:intergenic 20.0%
!! CAAAACAAAAAAATTTACAG+GGG - chr8_2:61903614-61903633 Msa1260040:CDS 20.0%
!!! TTCTTTACCTTGTAAATTTT+CGG + chr8_2:61903645-61903664 None:intergenic 20.0%
!!! ATTAACCCTTTAATTTTCAT+TGG - chr8_2:61903667-61903686 Msa1260040:CDS 20.0%
!! AAACTCCAATGAAAATTAAA+GGG + chr8_2:61903675-61903694 None:intergenic 20.0%
!! TAAACTCCAATGAAAATTAA+AGG + chr8_2:61903676-61903695 None:intergenic 20.0%
!!! TTATGTCAATTTTGGATAAT+TGG - chr8_2:61904054-61904073 Msa1260040:intron 20.0%
!! CAATGATATAATGAGAATTA+AGG - chr8_2:61904288-61904307 Msa1260040:intron 20.0%
!! ATGATATAATGAGAATTAAG+GGG - chr8_2:61904290-61904309 Msa1260040:intron 20.0%
!!! TTTGTAGTTTTTTTTTCTTC+GGG + chr8_2:61904668-61904687 None:intergenic 20.0%
!!! GTTTTGTAGTTTTTTTTCTT+AGG - chr8_2:61904822-61904841 Msa1260040:intron 20.0%
!!! TTTGTAGTTTTTTTTCTTAG+GGG - chr8_2:61904824-61904843 Msa1260040:intron 20.0%
!! CTGCAAATATGTTAAAAAAA+TGG + chr8_2:61904899-61904918 None:intergenic 20.0%
!! TATTCATGGTGATGAAAAAA+TGG + chr8_2:61903338-61903357 None:intergenic 25.0%
!! TAAAATTTCTCACGTTGATT+TGG + chr8_2:61903393-61903412 None:intergenic 25.0%
!! TTGTGTCTCAACAAAATTTT+GGG + chr8_2:61904330-61904349 None:intergenic 25.0%
!! TTTGTGTCTCAACAAAATTT+TGG + chr8_2:61904331-61904350 None:intergenic 25.0%
! GTTTATATACTTCAAGGTAT+AGG + chr8_2:61904361-61904380 None:intergenic 25.0%
! TAGTCAGTTTATATACTTCA+AGG + chr8_2:61904367-61904386 None:intergenic 25.0%
!!! TTGTAGTTTTTTTTTCTTCG+GGG + chr8_2:61904667-61904686 None:intergenic 25.0%
!!! TTGTAGTTTTTTTTCTTAGG+GGG - chr8_2:61904825-61904844 Msa1260040:intron 25.0%
! GTAATTTATGTATGCATCTA+TGG + chr8_2:61904940-61904959 None:intergenic 25.0%
! TAGATGCATACATAAATTAC+TGG - chr8_2:61904940-61904959 Msa1260040:intron 25.0%
! GACTTATTAAATTCTGTTTC+AGG - chr8_2:61905018-61905037 Msa1260040:intron 25.0%
!! TATGATGATGATGATATAGT+TGG - chr8_2:61905508-61905527 Msa1260040:intron 25.0%
!! TATTCATGGTGATGAAAAAA+TGG + chr8_2:61903338-61903357 None:intergenic 25.0%
!! TAAAATTTCTCACGTTGATT+TGG + chr8_2:61903393-61903412 None:intergenic 25.0%
!! TTGTGTCTCAACAAAATTTT+GGG + chr8_2:61904330-61904349 None:intergenic 25.0%
!! TTTGTGTCTCAACAAAATTT+TGG + chr8_2:61904331-61904350 None:intergenic 25.0%
! GTTTATATACTTCAAGGTAT+AGG + chr8_2:61904361-61904380 None:intergenic 25.0%
! TAGTCAGTTTATATACTTCA+AGG + chr8_2:61904367-61904386 None:intergenic 25.0%
!!! TTGTAGTTTTTTTTTCTTCG+GGG + chr8_2:61904667-61904686 None:intergenic 25.0%
!!! TTGTAGTTTTTTTTCTTAGG+GGG - chr8_2:61904825-61904844 Msa1260040:intron 25.0%
! GTAATTTATGTATGCATCTA+TGG + chr8_2:61904940-61904959 None:intergenic 25.0%
! TAGATGCATACATAAATTAC+TGG - chr8_2:61904940-61904959 Msa1260040:intron 25.0%
! GACTTATTAAATTCTGTTTC+AGG - chr8_2:61905018-61905037 Msa1260040:intron 25.0%
!! TATGATGATGATGATATAGT+TGG - chr8_2:61905508-61905527 Msa1260040:intron 25.0%
!!! TTTGGATTTTGAGGCTAAAA+TGG + chr8_2:61903375-61903394 None:intergenic 30.0%
GGAAAAACCGAAAATTTACA+AGG - chr8_2:61903635-61903654 Msa1260040:CDS 30.0%
AGAAAAACTGAGAAGGAAAA+TGG - chr8_2:61903855-61903874 Msa1260040:CDS 30.0%
GATAAAGCTATGACTAAACT+GGG - chr8_2:61903877-61903896 Msa1260040:CDS 30.0%
ATCATATCAGTCTTCAACAT+GGG + chr8_2:61904228-61904247 None:intergenic 30.0%
TATCATATCAGTCTTCAACA+TGG + chr8_2:61904229-61904248 None:intergenic 30.0%
!! GCTGATTGATTTTCTTGTAA+TGG - chr8_2:61904265-61904284 Msa1260040:intron 30.0%
! TGTGTCTCAACAAAATTTTG+GGG + chr8_2:61904329-61904348 None:intergenic 30.0%
! TCGCAACTTTGGAAAAATTA+GGG + chr8_2:61904637-61904656 None:intergenic 30.0%
! ATCGCAACTTTGGAAAAATT+AGG + chr8_2:61904638-61904657 None:intergenic 30.0%
! TTTTTCCAAAGTTGCGATTT+TGG - chr8_2:61904640-61904659 Msa1260040:intron 30.0%
!!! TGTAGTTTTTTTTTCTTCGG+GGG + chr8_2:61904666-61904685 None:intergenic 30.0%
AAGGCCAAAAAAATAACATG+TGG + chr8_2:61904762-61904781 None:intergenic 30.0%
!!! ACATGTTATTTTTTTGGCCT+TGG - chr8_2:61904761-61904780 Msa1260040:intron 30.0%
!!! CATGTTATTTTTTTGGCCTT+GGG - chr8_2:61904762-61904781 Msa1260040:intron 30.0%
!!! ATGTTATTTTTTTGGCCTTG+GGG - chr8_2:61904763-61904782 Msa1260040:intron 30.0%
ACTCGTAGCATGTTATATTA+CGG + chr8_2:61905107-61905126 None:intergenic 30.0%
TACGAGTTTGATGAATCAAA+AGG - chr8_2:61905120-61905139 Msa1260040:five_prime_UTR 30.0%
TGAATCAAAAGGAAAGTTGA+TGG - chr8_2:61905131-61905150 Msa1260040:five_prime_UTR 30.0%
GGAAAACTCATTGTTATAGA+TGG - chr8_2:61905240-61905259 Msa1260040:intron 30.0%
GTTATAAGTCTGACAAAGTA+TGG - chr8_2:61905316-61905335 Msa1260040:intron 30.0%
ATTTGTATGTGTGACTTTAG+AGG - chr8_2:61905477-61905496 Msa1260040:intron 30.0%
TCAGTGTTTATTAGTGTGTT+AGG - chr8_2:61905595-61905614 Msa1260040:five_prime_UTR 30.0%
!!! TTTGGATTTTGAGGCTAAAA+TGG + chr8_2:61903375-61903394 None:intergenic 30.0%
GGAAAAACCGAAAATTTACA+AGG - chr8_2:61903635-61903654 Msa1260040:CDS 30.0%
AGAAAAACTGAGAAGGAAAA+TGG - chr8_2:61903855-61903874 Msa1260040:CDS 30.0%
GATAAAGCTATGACTAAACT+GGG - chr8_2:61903877-61903896 Msa1260040:CDS 30.0%
ATCATATCAGTCTTCAACAT+GGG + chr8_2:61904228-61904247 None:intergenic 30.0%
TATCATATCAGTCTTCAACA+TGG + chr8_2:61904229-61904248 None:intergenic 30.0%
!! GCTGATTGATTTTCTTGTAA+TGG - chr8_2:61904265-61904284 Msa1260040:intron 30.0%
! TGTGTCTCAACAAAATTTTG+GGG + chr8_2:61904329-61904348 None:intergenic 30.0%
! TCGCAACTTTGGAAAAATTA+GGG + chr8_2:61904637-61904656 None:intergenic 30.0%
! ATCGCAACTTTGGAAAAATT+AGG + chr8_2:61904638-61904657 None:intergenic 30.0%
! TTTTTCCAAAGTTGCGATTT+TGG - chr8_2:61904640-61904659 Msa1260040:intron 30.0%
!!! TGTAGTTTTTTTTTCTTCGG+GGG + chr8_2:61904666-61904685 None:intergenic 30.0%
AAGGCCAAAAAAATAACATG+TGG + chr8_2:61904762-61904781 None:intergenic 30.0%
!!! ACATGTTATTTTTTTGGCCT+TGG - chr8_2:61904761-61904780 Msa1260040:intron 30.0%
!!! CATGTTATTTTTTTGGCCTT+GGG - chr8_2:61904762-61904781 Msa1260040:intron 30.0%
!!! ATGTTATTTTTTTGGCCTTG+GGG - chr8_2:61904763-61904782 Msa1260040:intron 30.0%
ACTCGTAGCATGTTATATTA+CGG + chr8_2:61905107-61905126 None:intergenic 30.0%
TACGAGTTTGATGAATCAAA+AGG - chr8_2:61905120-61905139 Msa1260040:five_prime_UTR 30.0%
TGAATCAAAAGGAAAGTTGA+TGG - chr8_2:61905131-61905150 Msa1260040:five_prime_UTR 30.0%
GGAAAACTCATTGTTATAGA+TGG - chr8_2:61905240-61905259 Msa1260040:intron 30.0%
GTTATAAGTCTGACAAAGTA+TGG - chr8_2:61905316-61905335 Msa1260040:intron 30.0%
ATTTGTATGTGTGACTTTAG+AGG - chr8_2:61905477-61905496 Msa1260040:intron 30.0%
TCAGTGTTTATTAGTGTGTT+AGG - chr8_2:61905595-61905614 Msa1260040:five_prime_UTR 30.0%
CAGAACAGAACACTTATTCA+TGG + chr8_2:61903352-61903371 None:intergenic 35.0%
!!! TCACGTTGATTTGGATTTTG+AGG + chr8_2:61903384-61903403 None:intergenic 35.0%
GTCTTTACCTCCTGTAATAT+AGG - chr8_2:61903462-61903481 Msa1260040:three_prime_UTR 35.0%
GAAATGACCTATATTACAGG+AGG + chr8_2:61903472-61903491 None:intergenic 35.0%
CCTGTAATATAGGTCATTTC+CGG - chr8_2:61903472-61903491 Msa1260040:three_prime_UTR 35.0%
!!! GTTTTGATTTACCCCCTAAT+AGG - chr8_2:61903520-61903539 Msa1260040:three_prime_UTR 35.0%
!! TTTTTGTTTGGCCTATTAGG+GGG + chr8_2:61903586-61903605 None:intergenic 35.0%
!! GTTTTTGTTTGGCCTATTAG+GGG + chr8_2:61903585-61903604 None:intergenic 35.0%
!! CGTTTTTGTTTGGCCTATTA+GGG + chr8_2:61903536-61903555 None:intergenic 35.0%
!! TCGTTTTTGTTTGGCCTATT+AGG + chr8_2:61903537-61903556 None:intergenic 35.0%
!! TGGTTTTTGTTTGGCCTATT+AGG - chr8_2:61903583-61903602 Msa1260040:CDS 35.0%
!! GGTTTTTGTTTGGCCTATTA+GGG - chr8_2:61903584-61903603 Msa1260040:CDS 35.0%
!! GTTTTTGTTTGGCCTATTAG+GGG - chr8_2:61903585-61903604 Msa1260040:CDS 35.0%
!! TTTTTGTTTGGCCTATTAGG+GGG - chr8_2:61903586-61903605 Msa1260040:CDS 35.0%
!!! GTTTTGATTTACCCCCTAAT+AGG + chr8_2:61903520-61903539 None:intergenic 35.0%
TTCTGCAAGAAAAACTGAGA+AGG - chr8_2:61903848-61903867 Msa1260040:CDS 35.0%
GGATAAAGCTATGACTAAAC+TGG - chr8_2:61903876-61903895 Msa1260040:CDS 35.0%
TATGTGAGAAATCTCTTCCT+TGG + chr8_2:61903926-61903945 None:intergenic 35.0%
! AAGGCTCATACTGATCATTT+TGG + chr8_2:61904404-61904423 None:intergenic 35.0%
CCAATTAACACCAAGAGTAA+AGG + chr8_2:61904423-61904442 None:intergenic 35.0%
!! CCTTTACTCTTGGTGTTAAT+TGG - chr8_2:61904420-61904439 Msa1260040:CDS 35.0%
CTCAAATACTGTTGAAGACA+AGG - chr8_2:61904545-61904564 Msa1260040:intron 35.0%
! CTTTTCATCAACAAGCTCAA+AGG - chr8_2:61904573-61904592 Msa1260040:intron 35.0%
! GCAACTTTGGAAAAATTAGG+GGG + chr8_2:61904635-61904654 None:intergenic 35.0%
! CGCAACTTTGGAAAAATTAG+GGG + chr8_2:61904636-61904655 None:intergenic 35.0%
!!! GGTGCCACATGTTATTTTTT+TGG - chr8_2:61904755-61904774 Msa1260040:intron 35.0%
!!! TGTTATTTTTTTGGCCTTGG+GGG - chr8_2:61904764-61904783 Msa1260040:intron 35.0%
! TTTTGCAACTGTAGCAGTTT+TGG + chr8_2:61904791-61904810 None:intergenic 35.0%
TGCTACAGTTGCAAAACTTA+GGG - chr8_2:61904795-61904814 Msa1260040:intron 35.0%
AATCATTACCAGATCTCCTT+AGG - chr8_2:61905052-61905071 Msa1260040:CDS 35.0%
ATCATTACCAGATCTCCTTA+GGG - chr8_2:61905053-61905072 Msa1260040:CDS 35.0%
TCGTAGCATGTTATATTACG+GGG + chr8_2:61905105-61905124 None:intergenic 35.0%
CTCGTAGCATGTTATATTAC+GGG + chr8_2:61905106-61905125 None:intergenic 35.0%
AGATATTCAAATCGCGTCAA+AGG - chr8_2:61905204-61905223 Msa1260040:five_prime_UTR 35.0%
GTCAAAGGAACATTGTCAAA+GGG - chr8_2:61905219-61905238 Msa1260040:five_prime_UTR 35.0%
TATAGATGGAATGAAGACCA+AGG - chr8_2:61905254-61905273 Msa1260040:intron 35.0%
CAAACACAGTTCTTAACAAC+CGG + chr8_2:61905559-61905578 None:intergenic 35.0%
AGTCATCAGAGAAGAAGATT+TGG + chr8_2:61905645-61905664 None:intergenic 35.0%
CTCTGATGACTGATTATACA+TGG - chr8_2:61905654-61905673 Msa1260040:five_prime_UTR 35.0%
CAGAACAGAACACTTATTCA+TGG + chr8_2:61903352-61903371 None:intergenic 35.0%
!!! TCACGTTGATTTGGATTTTG+AGG + chr8_2:61903384-61903403 None:intergenic 35.0%
GTCTTTACCTCCTGTAATAT+AGG - chr8_2:61903462-61903481 Msa1260040:three_prime_UTR 35.0%
GAAATGACCTATATTACAGG+AGG + chr8_2:61903472-61903491 None:intergenic 35.0%
CCTGTAATATAGGTCATTTC+CGG - chr8_2:61903472-61903491 Msa1260040:three_prime_UTR 35.0%
!!! GTTTTGATTTACCCCCTAAT+AGG - chr8_2:61903520-61903539 Msa1260040:three_prime_UTR 35.0%
!! TTTTTGTTTGGCCTATTAGG+GGG + chr8_2:61903586-61903605 None:intergenic 35.0%
!! GTTTTTGTTTGGCCTATTAG+GGG + chr8_2:61903585-61903604 None:intergenic 35.0%
!! CGTTTTTGTTTGGCCTATTA+GGG + chr8_2:61903536-61903555 None:intergenic 35.0%
!! TCGTTTTTGTTTGGCCTATT+AGG + chr8_2:61903537-61903556 None:intergenic 35.0%
!! TGGTTTTTGTTTGGCCTATT+AGG - chr8_2:61903583-61903602 Msa1260040:CDS 35.0%
!! GGTTTTTGTTTGGCCTATTA+GGG - chr8_2:61903584-61903603 Msa1260040:CDS 35.0%
!! GTTTTTGTTTGGCCTATTAG+GGG - chr8_2:61903585-61903604 Msa1260040:CDS 35.0%
!! TTTTTGTTTGGCCTATTAGG+GGG - chr8_2:61903586-61903605 Msa1260040:CDS 35.0%
!!! GTTTTGATTTACCCCCTAAT+AGG + chr8_2:61903520-61903539 None:intergenic 35.0%
TTCTGCAAGAAAAACTGAGA+AGG - chr8_2:61903848-61903867 Msa1260040:CDS 35.0%
GGATAAAGCTATGACTAAAC+TGG - chr8_2:61903876-61903895 Msa1260040:CDS 35.0%
TATGTGAGAAATCTCTTCCT+TGG + chr8_2:61903926-61903945 None:intergenic 35.0%
! AAGGCTCATACTGATCATTT+TGG + chr8_2:61904404-61904423 None:intergenic 35.0%
CCAATTAACACCAAGAGTAA+AGG + chr8_2:61904423-61904442 None:intergenic 35.0%
!! CCTTTACTCTTGGTGTTAAT+TGG - chr8_2:61904420-61904439 Msa1260040:CDS 35.0%
CTCAAATACTGTTGAAGACA+AGG - chr8_2:61904545-61904564 Msa1260040:intron 35.0%
! CTTTTCATCAACAAGCTCAA+AGG - chr8_2:61904573-61904592 Msa1260040:intron 35.0%
! GCAACTTTGGAAAAATTAGG+GGG + chr8_2:61904635-61904654 None:intergenic 35.0%
! CGCAACTTTGGAAAAATTAG+GGG + chr8_2:61904636-61904655 None:intergenic 35.0%
!!! GGTGCCACATGTTATTTTTT+TGG - chr8_2:61904755-61904774 Msa1260040:intron 35.0%
!!! TGTTATTTTTTTGGCCTTGG+GGG - chr8_2:61904764-61904783 Msa1260040:intron 35.0%
! TTTTGCAACTGTAGCAGTTT+TGG + chr8_2:61904791-61904810 None:intergenic 35.0%
TGCTACAGTTGCAAAACTTA+GGG - chr8_2:61904795-61904814 Msa1260040:intron 35.0%
AATCATTACCAGATCTCCTT+AGG - chr8_2:61905052-61905071 Msa1260040:CDS 35.0%
ATCATTACCAGATCTCCTTA+GGG - chr8_2:61905053-61905072 Msa1260040:CDS 35.0%
TCGTAGCATGTTATATTACG+GGG + chr8_2:61905105-61905124 None:intergenic 35.0%
CTCGTAGCATGTTATATTAC+GGG + chr8_2:61905106-61905125 None:intergenic 35.0%
AGATATTCAAATCGCGTCAA+AGG - chr8_2:61905204-61905223 Msa1260040:five_prime_UTR 35.0%
GTCAAAGGAACATTGTCAAA+GGG - chr8_2:61905219-61905238 Msa1260040:five_prime_UTR 35.0%
TATAGATGGAATGAAGACCA+AGG - chr8_2:61905254-61905273 Msa1260040:intron 35.0%
CAAACACAGTTCTTAACAAC+CGG + chr8_2:61905559-61905578 None:intergenic 35.0%
AGTCATCAGAGAAGAAGATT+TGG + chr8_2:61905645-61905664 None:intergenic 35.0%
CCGGAAATGACCTATATTAC+AGG + chr8_2:61903475-61903494 None:intergenic 40.0%
AATTTATAGGGGGGCAAAAC+CGG + chr8_2:61903494-61903513 None:intergenic 40.0%
GCTGCATGGTGAAAGAAAAA+TGG + chr8_2:61903715-61903734 None:intergenic 40.0%
GTCACTATCTTGGATGGTAA+AGG + chr8_2:61903780-61903799 None:intergenic 40.0%
! TAGAGTGTCACTATCTTGGA+TGG + chr8_2:61903786-61903805 None:intergenic 40.0%
! GACTTAGAGTGTCACTATCT+TGG + chr8_2:61903790-61903809 None:intergenic 40.0%
! TGACTAAACTGGGAAGCTTT+TGG - chr8_2:61903887-61903906 Msa1260040:CDS 40.0%
! AATCTCTTCCTTGGCTTTCT+TGG + chr8_2:61903917-61903936 None:intergenic 40.0%
TGTGAAGCAGAACATGAACT+AGG - chr8_2:61904195-61904214 Msa1260040:intron 40.0%
TCAGTATGAGCCTTTACTCT+TGG - chr8_2:61904410-61904429 Msa1260040:CDS 40.0%
TGCCACATGTGCAAAACTTA+GGG + chr8_2:61904697-61904716 None:intergenic 40.0%
!!! GTTATTTTTTTGGCCTTGGG+GGG - chr8_2:61904765-61904784 Msa1260040:intron 40.0%
CTGCTACAGTTGCAAAACTT+AGG - chr8_2:61904794-61904813 Msa1260040:intron 40.0%
GCTACAGTTGCAAAACTTAG+GGG - chr8_2:61904796-61904815 Msa1260040:intron 40.0%
CTACAGTTGCAAAACTTAGG+GGG - chr8_2:61904797-61904816 Msa1260040:intron 40.0%
! CTTTCACGAAGTTGCGATTT+TGG + chr8_2:61904851-61904870 None:intergenic 40.0%
ATCGCAACTTCGTGAAAGTT+AGG - chr8_2:61904853-61904872 Msa1260040:intron 40.0%
TCGCAACTTCGTGAAAGTTA+GGG - chr8_2:61904854-61904873 Msa1260040:intron 40.0%
CGTAGCATGTTATATTACGG+GGG + chr8_2:61905104-61905123 None:intergenic 40.0%
CGTCAAAGGAACATTGTCAA+AGG - chr8_2:61905218-61905237 Msa1260040:five_prime_UTR 40.0%
AAAGTATGGTTCACTACCAC+TGG - chr8_2:61905330-61905349 Msa1260040:intron 40.0%
CCTTGATTTCTTAACACCAG+TGG + chr8_2:61905349-61905368 None:intergenic 40.0%
! CCACTGGTGTTAAGAAATCA+AGG - chr8_2:61905346-61905365 Msa1260040:intron 40.0%
GGCATTTCATAGGCATCTTT+AGG + chr8_2:61905372-61905391 None:intergenic 40.0%
TGCACATGTTACATTGTGAC+CGG - chr8_2:61905537-61905556 Msa1260040:intron 40.0%
CCGGAAATGACCTATATTAC+AGG + chr8_2:61903475-61903494 None:intergenic 40.0%
AATTTATAGGGGGGCAAAAC+CGG + chr8_2:61903494-61903513 None:intergenic 40.0%
GCTGCATGGTGAAAGAAAAA+TGG + chr8_2:61903715-61903734 None:intergenic 40.0%
GTCACTATCTTGGATGGTAA+AGG + chr8_2:61903780-61903799 None:intergenic 40.0%
! TAGAGTGTCACTATCTTGGA+TGG + chr8_2:61903786-61903805 None:intergenic 40.0%
! GACTTAGAGTGTCACTATCT+TGG + chr8_2:61903790-61903809 None:intergenic 40.0%
! TGACTAAACTGGGAAGCTTT+TGG - chr8_2:61903887-61903906 Msa1260040:CDS 40.0%
! AATCTCTTCCTTGGCTTTCT+TGG + chr8_2:61903917-61903936 None:intergenic 40.0%
TGTGAAGCAGAACATGAACT+AGG - chr8_2:61904195-61904214 Msa1260040:intron 40.0%
TCAGTATGAGCCTTTACTCT+TGG - chr8_2:61904410-61904429 Msa1260040:CDS 40.0%
TGCCACATGTGCAAAACTTA+GGG + chr8_2:61904697-61904716 None:intergenic 40.0%
!!! GTTATTTTTTTGGCCTTGGG+GGG - chr8_2:61904765-61904784 Msa1260040:intron 40.0%
CTGCTACAGTTGCAAAACTT+AGG - chr8_2:61904794-61904813 Msa1260040:intron 40.0%
GCTACAGTTGCAAAACTTAG+GGG - chr8_2:61904796-61904815 Msa1260040:intron 40.0%
CTACAGTTGCAAAACTTAGG+GGG - chr8_2:61904797-61904816 Msa1260040:intron 40.0%
! CTTTCACGAAGTTGCGATTT+TGG + chr8_2:61904851-61904870 None:intergenic 40.0%
ATCGCAACTTCGTGAAAGTT+AGG - chr8_2:61904853-61904872 Msa1260040:intron 40.0%
TCGCAACTTCGTGAAAGTTA+GGG - chr8_2:61904854-61904873 Msa1260040:intron 40.0%
CGTAGCATGTTATATTACGG+GGG + chr8_2:61905104-61905123 None:intergenic 40.0%
CGTCAAAGGAACATTGTCAA+AGG - chr8_2:61905218-61905237 Msa1260040:five_prime_UTR 40.0%
AAAGTATGGTTCACTACCAC+TGG - chr8_2:61905330-61905349 Msa1260040:intron 40.0%
CCTTGATTTCTTAACACCAG+TGG + chr8_2:61905349-61905368 None:intergenic 40.0%
! CCACTGGTGTTAAGAAATCA+AGG - chr8_2:61905346-61905365 Msa1260040:intron 40.0%
GGCATTTCATAGGCATCTTT+AGG + chr8_2:61905372-61905391 None:intergenic 40.0%
TGCACATGTTACATTGTGAC+CGG - chr8_2:61905537-61905556 Msa1260040:intron 40.0%
CGTACGCTGCATAACAAATC+AGG + chr8_2:61903744-61903763 None:intergenic 45.0%
TTGGATCTCCAAGAAAGCCA+AGG - chr8_2:61903906-61903925 Msa1260040:CDS 45.0%
GAGACTCACAGATAAGTCGT+CGG + chr8_2:61903950-61903969 None:intergenic 45.0%
CAGAACATGAACTAGGCAAC+TGG - chr8_2:61904202-61904221 Msa1260040:intron 45.0%
CCACATGTGCAAAACTTAGG+GGG + chr8_2:61904695-61904714 None:intergenic 45.0%
GCCACATGTGCAAAACTTAG+GGG + chr8_2:61904696-61904715 None:intergenic 45.0%
CTGCCACATGTGCAAAACTT+AGG + chr8_2:61904698-61904717 None:intergenic 45.0%
! GCACATGTGGCAGTTTTACT+CGG - chr8_2:61904705-61904724 Msa1260040:intron 45.0%
AACATGTGGCACCTCACTTA+GGG + chr8_2:61904748-61904767 None:intergenic 45.0%
TAACATGTGGCACCTCACTT+AGG + chr8_2:61904749-61904768 None:intergenic 45.0%
CGCAACTTCGTGAAAGTTAG+GGG - chr8_2:61904855-61904874 Msa1260040:intron 45.0%
CTTGAAGCATACCTCAGAAG+GGG + chr8_2:61905169-61905188 None:intergenic 45.0%
CCTTGAAGCATACCTCAGAA+GGG + chr8_2:61905170-61905189 None:intergenic 45.0%
TCCTTGAAGCATACCTCAGA+AGG + chr8_2:61905171-61905190 None:intergenic 45.0%
TGAAGACCAAGGTTCTTGTG+TGG - chr8_2:61905265-61905284 Msa1260040:intron 45.0%
GAAGACCAAGGTTCTTGTGT+GGG - chr8_2:61905266-61905285 Msa1260040:intron 45.0%
CTTAACCCACACAAGAACCT+TGG + chr8_2:61905274-61905293 None:intergenic 45.0%
! CAAGGTTCTTGTGTGGGTTA+AGG - chr8_2:61905272-61905291 Msa1260040:intron 45.0%
! AGCTTCACGAGGCATTTCAT+AGG + chr8_2:61905382-61905401 None:intergenic 45.0%
AATGCCTCGTGAAGCTGTTA+AGG - chr8_2:61905386-61905405 Msa1260040:intron 45.0%
CGTACGCTGCATAACAAATC+AGG + chr8_2:61903744-61903763 None:intergenic 45.0%
TTGGATCTCCAAGAAAGCCA+AGG - chr8_2:61903906-61903925 Msa1260040:CDS 45.0%
GAGACTCACAGATAAGTCGT+CGG + chr8_2:61903950-61903969 None:intergenic 45.0%
CAGAACATGAACTAGGCAAC+TGG - chr8_2:61904202-61904221 Msa1260040:intron 45.0%
CCACATGTGCAAAACTTAGG+GGG + chr8_2:61904695-61904714 None:intergenic 45.0%
GCCACATGTGCAAAACTTAG+GGG + chr8_2:61904696-61904715 None:intergenic 45.0%
CTGCCACATGTGCAAAACTT+AGG + chr8_2:61904698-61904717 None:intergenic 45.0%
! GCACATGTGGCAGTTTTACT+CGG - chr8_2:61904705-61904724 Msa1260040:intron 45.0%
AACATGTGGCACCTCACTTA+GGG + chr8_2:61904748-61904767 None:intergenic 45.0%
TAACATGTGGCACCTCACTT+AGG + chr8_2:61904749-61904768 None:intergenic 45.0%
CGCAACTTCGTGAAAGTTAG+GGG - chr8_2:61904855-61904874 Msa1260040:intron 45.0%
CTTGAAGCATACCTCAGAAG+GGG + chr8_2:61905169-61905188 None:intergenic 45.0%
CCTTGAAGCATACCTCAGAA+GGG + chr8_2:61905170-61905189 None:intergenic 45.0%
TCCTTGAAGCATACCTCAGA+AGG + chr8_2:61905171-61905190 None:intergenic 45.0%
TGAAGACCAAGGTTCTTGTG+TGG - chr8_2:61905265-61905284 Msa1260040:intron 45.0%
GAAGACCAAGGTTCTTGTGT+GGG - chr8_2:61905266-61905285 Msa1260040:intron 45.0%
CTTAACCCACACAAGAACCT+TGG + chr8_2:61905274-61905293 None:intergenic 45.0%
! CAAGGTTCTTGTGTGGGTTA+AGG - chr8_2:61905272-61905291 Msa1260040:intron 45.0%
! AGCTTCACGAGGCATTTCAT+AGG + chr8_2:61905382-61905401 None:intergenic 45.0%
AATGCCTCGTGAAGCTGTTA+AGG - chr8_2:61905386-61905405 Msa1260040:intron 45.0%
AAATCAGGACGTACGCTGCA+TGG + chr8_2:61903729-61903748 None:intergenic 50.0%
CATGTGCAAAACTTAGGGGG+CGG + chr8_2:61904692-61904711 None:intergenic 50.0%
! CCCCCTAAGTTTTGCACATG+TGG - chr8_2:61904692-61904711 Msa1260040:intron 50.0%
CAGTTGCAAAACTTAGGGGG+CGG - chr8_2:61904800-61904819 Msa1260040:intron 50.0%
TTGTGCTCCCTAAGGAGATC+TGG + chr8_2:61905063-61905082 None:intergenic 50.0%
ATATTACGGGGGAACATGCC+TGG + chr8_2:61905093-61905112 None:intergenic 50.0%
!! CCCTTCTGAGGTATGCTTCA+AGG - chr8_2:61905167-61905186 Msa1260040:five_prime_UTR 50.0%
TCCACCTTAACAGCTTCACG+AGG + chr8_2:61905393-61905412 None:intergenic 50.0%
AAATCAGGACGTACGCTGCA+TGG + chr8_2:61903729-61903748 None:intergenic 50.0%
CATGTGCAAAACTTAGGGGG+CGG + chr8_2:61904692-61904711 None:intergenic 50.0%
! CCCCCTAAGTTTTGCACATG+TGG - chr8_2:61904692-61904711 Msa1260040:intron 50.0%
CAGTTGCAAAACTTAGGGGG+CGG - chr8_2:61904800-61904819 Msa1260040:intron 50.0%
TTGTGCTCCCTAAGGAGATC+TGG + chr8_2:61905063-61905082 None:intergenic 50.0%
ATATTACGGGGGAACATGCC+TGG + chr8_2:61905093-61905112 None:intergenic 50.0%
!! CCCTTCTGAGGTATGCTTCA+AGG - chr8_2:61905167-61905186 Msa1260040:five_prime_UTR 50.0%
TCCACCTTAACAGCTTCACG+AGG + chr8_2:61905393-61905412 None:intergenic 50.0%
GGGGGCCAAAATCGCAACTT+TGG + chr8_2:61904843-61904862 None:intergenic 55.0%
TTACTCGGTCTACGCTGACG+TGG - chr8_2:61904720-61904739 Msa1260040:intron 55.0%
GAGGAAGGTTGTGCTCCCTA+AGG + chr8_2:61905071-61905090 None:intergenic 55.0%
GCATTTGTCCTCCCCTTCTG+AGG - chr8_2:61905155-61905174 Msa1260040:five_prime_UTR 55.0%
GAAGCATACCTCAGAAGGGG+AGG + chr8_2:61905166-61905185 None:intergenic 55.0%
GCCTCGTGAAGCTGTTAAGG+TGG - chr8_2:61905389-61905408 Msa1260040:intron 55.0%
GGGGGCCAAAATCGCAACTT+TGG + chr8_2:61904843-61904862 None:intergenic 55.0%
TTACTCGGTCTACGCTGACG+TGG - chr8_2:61904720-61904739 Msa1260040:intron 55.0%
GAGGAAGGTTGTGCTCCCTA+AGG + chr8_2:61905071-61905090 None:intergenic 55.0%
GCATTTGTCCTCCCCTTCTG+AGG - chr8_2:61905155-61905174 Msa1260040:five_prime_UTR 55.0%
GAAGCATACCTCAGAAGGGG+AGG + chr8_2:61905166-61905185 None:intergenic 55.0%
GCCTCGTGAAGCTGTTAAGG+TGG - chr8_2:61905389-61905408 Msa1260040:intron 55.0%
CTGACGTGGCACCCTAAGTG+AGG - chr8_2:61904734-61904753 Msa1260040:intron 60.0%
!! GTAGCAGTTTTGGCCCCCCA+AGG + chr8_2:61904781-61904800 None:intergenic 60.0%
! AGGGAGCACAACCTTCCTCC+AGG - chr8_2:61905072-61905091 Msa1260040:CDS 60.0%
TTACGGGGGAACATGCCTGG+AGG + chr8_2:61905090-61905109 None:intergenic 60.0%
CTGACGTGGCACCCTAAGTG+AGG - chr8_2:61904734-61904753 Msa1260040:intron 60.0%
!! GTAGCAGTTTTGGCCCCCCA+AGG + chr8_2:61904781-61904800 None:intergenic 60.0%
! AGGGAGCACAACCTTCCTCC+AGG - chr8_2:61905072-61905091 Msa1260040:CDS 60.0%
TTACGGGGGAACATGCCTGG+AGG + chr8_2:61905090-61905109 None:intergenic 60.0%
GGGGGAACATGCCTGGAGGA+AGG + chr8_2:61905086-61905105 None:intergenic 65.0%
GGGGGAACATGCCTGGAGGA+AGG + chr8_2:61905086-61905105 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 61903316 61905674 61903316 ID=Msa1260040;Name=Msa1260040
chr8_2 mRNA 61903316 61905674 61903316 ID=Msa1260040-mRNA-1;Parent=Msa1260040;Name=Msa1260040-mRNA-1;_AED=0.01;_eAED=0.01;_QI=224|1|1|1|0.66|0.5|4|252|174
chr8_2 exon 61903316 61903950 61903316 ID=Msa1260040-mRNA-1:exon:19563;Parent=Msa1260040-mRNA-1
chr8_2 exon 61904396 61904450 61904396 ID=Msa1260040-mRNA-1:exon:19562;Parent=Msa1260040-mRNA-1
chr8_2 exon 61905030 61905256 61905030 ID=Msa1260040-mRNA-1:exon:19561;Parent=Msa1260040-mRNA-1
chr8_2 exon 61905591 61905674 61905591 ID=Msa1260040-mRNA-1:exon:19560;Parent=Msa1260040-mRNA-1
chr8_2 five_prime_UTR 61905591 61905674 61905591 ID=Msa1260040-mRNA-1:five_prime_utr;Parent=Msa1260040-mRNA-1
chr8_2 five_prime_UTR 61905117 61905256 61905117 ID=Msa1260040-mRNA-1:five_prime_utr;Parent=Msa1260040-mRNA-1
chr8_2 CDS 61905030 61905116 61905030 ID=Msa1260040-mRNA-1:cds;Parent=Msa1260040-mRNA-1
chr8_2 CDS 61904396 61904450 61904396 ID=Msa1260040-mRNA-1:cds;Parent=Msa1260040-mRNA-1
chr8_2 CDS 61903568 61903950 61903568 ID=Msa1260040-mRNA-1:cds;Parent=Msa1260040-mRNA-1
chr8_2 three_prime_UTR 61903316 61903567 61903316 ID=Msa1260040-mRNA-1:three_prime_utr;Parent=Msa1260040-mRNA-1
Gene Sequence

>Msa1260040

ATGGATAAAGCTATGACTAAACTGGGAAGCTTTTGGATCTCCAAGAAAGCCAAGGAAGAGATTTCTCACATAACCGACGACTTATCTTCTCTCTCAAATACTGTTGAAGACAAGGCGAAACTTTTCATCAACAAGCTCAAAGGAAAAACTCAGAAATCATTACCAGATCTCCTTAGGGAGCACAACCTTCCTCCAGGCATGTTCCCCCGTAATATAACATGCTACGAGTTTGATGAATCAAAAGGAAAGTTGATGGTGCATTTGTCCTCCCCTTCTGAGGTATGCTTCAAGGACTCGTCTATTGTGAGATATTCAAATCGCGTCAAAGGAACATTGTCAAAGGGAAAACTCATTGTTATAGATGGAATGAAGACCAAGGTTCTTGTGTGGGTTAAGGTTACTAGTGTTTATGTTGAGAGTTATAAGTCTGACAAAGTATGGTTCACTACCACTGGTGTTAAGAAATCAAGGCCTAAAGATGCCTATGAAATGCCTCGTGAAGCTGTTAAGGTGGAAGATTATTGA
Protein sequence

>Msa1260040

MDKAMTKLGSFWISKKAKEEISHITDDLSSLSNTVEDKAKLFINKLKGKTQKSLPDLLREHNLPPGMFPRNITCYEFDESKGKLMVHLSSPSEVCFKDSSIVRYSNRVKGTLSKGKLIVIDGMKTKVLVWVKVTSVYVESYKSDKVWFTTTGVKKSRPKDAYEMPREAVKVEDY*