Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1395870 | XP_013458369.1 | 97.586 | 497 | 12 | 0 | 1 | 497 | 1 | 497 | 0.0 | 1006 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1395870 | sp|Q42456|ASPR1_ORYSJ | 51.639 | 488 | 224 | 2 | 22 | 497 | 22 | 509 | 0.0 | 568 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1395870 | A0A072V2S8 | 97.586 | 497 | 12 | 0 | 1 | 497 | 1 | 497 | 0.0 | 1006 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0029540 | Msa1395870 | -0.801870 | 7.341055e-49 | -8.615850e-47 |
| Msa0036430 | Msa1395870 | 0.824787 | 6.678819e-54 | -8.615850e-47 |
| Msa0048000 | Msa1395870 | 0.800287 | 1.547214e-48 | -8.615850e-47 |
| Msa0069260 | Msa1395870 | 0.803838 | 2.879363e-49 | -8.615850e-47 |
| Msa0069310 | Msa1395870 | 0.820975 | 5.163679e-53 | -8.615850e-47 |
| Msa0097990 | Msa1395870 | 0.807048 | 6.112650e-50 | -8.615850e-47 |
| Msa0105420 | Msa1395870 | 0.818477 | 1.920961e-52 | -8.615850e-47 |
| Msa1369700 | Msa1395870 | 0.828573 | 8.340429e-55 | -8.615850e-47 |
| Msa1381140 | Msa1395870 | 0.803407 | 3.537149e-49 | -8.615850e-47 |
| Msa1390310 | Msa1395870 | 0.814802 | 1.280033e-51 | -8.615850e-47 |
| Msa1395870 | Msa1397250 | 0.819428 | 1.167510e-52 | -8.615850e-47 |
| Msa1395870 | Msa1399560 | 0.945246 | 4.373756e-104 | -8.615850e-47 |
| Msa1395870 | Msa1401150 | 0.811282 | 7.569786e-51 | -8.615850e-47 |
| Msa1395870 | Msa1404540 | 0.800623 | 1.321068e-48 | -8.615850e-47 |
| Msa1395870 | Msa1437190 | 0.812080 | 5.076441e-51 | -8.615850e-47 |
| Msa1395870 | Msa1439960 | 0.802150 | 6.430380e-49 | -8.615850e-47 |
| Msa1395870 | Msa1443840 | 0.852713 | 3.853963e-61 | -8.615850e-47 |
| Msa1395870 | Msa1449730 | 0.824649 | 7.199937e-54 | -8.615850e-47 |
| Msa1395870 | Msa1452060 | 0.845329 | 4.346112e-59 | -8.615850e-47 |
| Msa1395870 | Msa1460380 | 0.830860 | 2.315336e-55 | -8.615850e-47 |
| Msa0611380 | Msa1395870 | 0.837995 | 3.739916e-57 | -8.615850e-47 |
| Msa0618180 | Msa1395870 | 0.822487 | 2.307549e-53 | -8.615850e-47 |
| Msa0618220 | Msa1395870 | 0.842835 | 2.028183e-58 | -8.615850e-47 |
| Msa0628640 | Msa1395870 | 0.849068 | 4.098762e-60 | -8.615850e-47 |
| Msa0631120 | Msa1395870 | 0.877465 | 6.150621e-69 | -8.615850e-47 |
| Msa0650070 | Msa1395870 | 0.833995 | 3.871022e-56 | -8.615850e-47 |
| Msa0666030 | Msa1395870 | 0.836150 | 1.107570e-56 | -8.615850e-47 |
| Msa0669340 | Msa1395870 | 0.875057 | 4.159417e-68 | -8.615850e-47 |
| Msa0684500 | Msa1395870 | 0.846205 | 2.513151e-59 | -8.615850e-47 |
| Msa0692060 | Msa1395870 | 0.825194 | 5.354217e-54 | -8.615850e-47 |
| Msa0701970 | Msa1395870 | 0.821195 | 4.592995e-53 | -8.615850e-47 |
| Msa0716450 | Msa1395870 | 0.854067 | 1.575440e-61 | -8.615850e-47 |
| Msa0717260 | Msa1395870 | 0.878037 | 3.883199e-69 | -8.615850e-47 |
| Msa0734230 | Msa1395870 | 0.824199 | 9.185514e-54 | -8.615850e-47 |
| Msa0741900 | Msa1395870 | 0.811244 | 7.713306e-51 | -8.615850e-47 |
| Msa0754720 | Msa1395870 | -0.817930 | 2.553460e-52 | -8.615850e-47 |
| Msa0756630 | Msa1395870 | -0.800118 | 1.674727e-48 | -8.615850e-47 |
| Msa0758320 | Msa1395870 | 0.882343 | 1.128018e-70 | -8.615850e-47 |
| Msa0775440 | Msa1395870 | 0.874211 | 8.061997e-68 | -8.615850e-47 |
| Msa0780740 | Msa1395870 | 0.802775 | 4.779337e-49 | -8.615850e-47 |
| Msa0799030 | Msa1395870 | 0.852631 | 4.067721e-61 | -8.615850e-47 |
| Msa0799700 | Msa1395870 | 0.817033 | 4.066296e-52 | -8.615850e-47 |
| Msa0812820 | Msa1395870 | 0.845603 | 3.664298e-59 | -8.615850e-47 |
| Msa0819680 | Msa1395870 | 0.804988 | 1.657982e-49 | -8.615850e-47 |
| Msa0822990 | Msa1395870 | 0.824668 | 7.125636e-54 | -8.615850e-47 |
| Msa0829620 | Msa1395870 | 0.803456 | 3.455962e-49 | -8.615850e-47 |
| Msa0837440 | Msa1395870 | 0.870530 | 1.361031e-66 | -8.615850e-47 |
| Msa0837980 | Msa1395870 | 0.884098 | 2.561425e-71 | -8.615850e-47 |
| Msa0124340 | Msa1395870 | 0.805264 | 1.451724e-49 | -8.615850e-47 |
| Msa0141100 | Msa1395870 | 0.890830 | 6.909288e-74 | -8.615850e-47 |
| Msa0148340 | Msa1395870 | 0.826462 | 2.676825e-54 | -8.615850e-47 |
| Msa0172350 | Msa1395870 | 0.817417 | 3.332884e-52 | -8.615850e-47 |
| Msa0183750 | Msa1395870 | 0.815131 | 1.081564e-51 | -8.615850e-47 |
| Msa0185380 | Msa1395870 | 0.807750 | 4.338710e-50 | -8.615850e-47 |
| Msa0191040 | Msa1395870 | 0.817819 | 2.705361e-52 | -8.615850e-47 |
| Msa0220300 | Msa1395870 | 0.831053 | 2.075927e-55 | -8.615850e-47 |
| Msa0225600 | Msa1395870 | 0.814910 | 1.210869e-51 | -8.615850e-47 |
| Msa0233340 | Msa1395870 | 0.817923 | 2.563290e-52 | -8.615850e-47 |
| Msa0236440 | Msa1395870 | 0.804170 | 2.456289e-49 | -8.615850e-47 |
| Msa1227950 | Msa1395870 | 0.832892 | 7.290969e-56 | -8.615850e-47 |
| Msa1227970 | Msa1395870 | 0.832620 | 8.519570e-56 | -8.615850e-47 |
| Msa1255280 | Msa1395870 | 0.865435 | 5.917437e-65 | -8.615850e-47 |
| Msa1258050 | Msa1395870 | 0.870639 | 1.253916e-66 | -8.615850e-47 |
| Msa1260040 | Msa1395870 | 0.804522 | 2.074908e-49 | -8.615850e-47 |
| Msa1266960 | Msa1395870 | 0.948743 | 5.138799e-107 | -8.615850e-47 |
| Msa1269580 | Msa1395870 | -0.804834 | 1.785894e-49 | -8.615850e-47 |
| Msa1291870 | Msa1395870 | 0.844620 | 6.752120e-59 | -8.615850e-47 |
| Msa1308130 | Msa1395870 | 0.800507 | 1.395386e-48 | -8.615850e-47 |
| Msa1329920 | Msa1395870 | 0.815951 | 7.103696e-52 | -8.615850e-47 |
| Msa1339940 | Msa1395870 | 0.845591 | 3.691787e-59 | -8.615850e-47 |
| Msa0374850 | Msa1395870 | 0.886568 | 3.054111e-72 | -8.615850e-47 |
| Msa0375090 | Msa1395870 | 0.887605 | 1.232563e-72 | -8.615850e-47 |
| Msa0385670 | Msa1395870 | 0.832181 | 1.094584e-55 | -8.615850e-47 |
| Msa0423360 | Msa1395870 | -0.802506 | 5.433123e-49 | -8.615850e-47 |
| Msa0435670 | Msa1395870 | 0.819369 | 1.204237e-52 | -8.615850e-47 |
| Msa0470340 | Msa1395870 | 0.882129 | 1.349696e-70 | -8.615850e-47 |
| Msa0470860 | Msa1395870 | 0.872870 | 2.280666e-67 | -8.615850e-47 |
| Msa0479680 | Msa1395870 | 0.804157 | 2.471478e-49 | -8.615850e-47 |
| Msa0480950 | Msa1395870 | 0.885292 | 9.219764e-72 | -8.615850e-47 |
| Msa0481110 | Msa1395870 | 0.838005 | 3.716709e-57 | -8.615850e-47 |
| Msa1002620 | Msa1395870 | 0.859099 | 5.227460e-63 | -8.615850e-47 |
| Msa1033560 | Msa1395870 | 0.856725 | 2.649618e-62 | -8.615850e-47 |
| Msa0266450 | Msa1395870 | 0.812353 | 4.425159e-51 | -8.615850e-47 |
| Msa0267760 | Msa1395870 | 0.810446 | 1.147920e-50 | -8.615850e-47 |
| Msa0311690 | Msa1395870 | 0.806157 | 9.427715e-50 | -8.615850e-47 |
| Msa0315250 | Msa1395870 | 0.810400 | 1.174718e-50 | -8.615850e-47 |
| Msa1113850 | Msa1395870 | 0.847109 | 1.423402e-59 | -8.615850e-47 |
| Msa1160400 | Msa1395870 | 0.830790 | 2.407832e-55 | -8.615850e-47 |
| Msa1190120 | Msa1395870 | 0.860368 | 2.169332e-63 | -8.615850e-47 |
| Msa1197590 | Msa1395870 | 0.829755 | 4.311040e-55 | -8.615850e-47 |
| Msa1201890 | Msa1395870 | 0.814523 | 1.475276e-51 | -8.615850e-47 |
| Msa1203000 | Msa1395870 | 0.867518 | 1.290465e-65 | -8.615850e-47 |
| Msa1211550 | Msa1395870 | 0.845362 | 4.257778e-59 | -8.615850e-47 |
| Msa1212440 | Msa1395870 | 0.803558 | 3.291987e-49 | -8.615850e-47 |
| Msa1217860 | Msa1395870 | 0.803143 | 4.012970e-49 | -8.615850e-47 |
| Msa1217940 | Msa1395870 | 0.855817 | 4.889069e-62 | -8.615850e-47 |
| Msa1218480 | Msa1395870 | 0.805014 | 1.637283e-49 | -8.615850e-47 |
| Msa1219260 | Msa1395870 | 0.967607 | 1.642910e-127 | -8.615850e-47 |
| Msa0526710 | Msa1395870 | 0.806699 | 7.246856e-50 | -8.615850e-47 |
| Msa0531430 | Msa1395870 | 0.849874 | 2.443341e-60 | -8.615850e-47 |
| Msa0534570 | Msa1395870 | 0.813450 | 2.544093e-51 | -8.615850e-47 |
| Msa0534590 | Msa1395870 | 0.876727 | 1.109744e-68 | -8.615850e-47 |
| Msa0548620 | Msa1395870 | 0.817709 | 2.864737e-52 | -8.615850e-47 |
| Msa0548660 | Msa1395870 | 0.806445 | 8.197118e-50 | -8.615850e-47 |
| Msa0565600 | Msa1395870 | 0.824466 | 7.949106e-54 | -8.615850e-47 |
| Msa0590800 | Msa1395870 | 0.870084 | 1.906062e-66 | -8.615850e-47 |
| Msa0853320 | Msa1395870 | 0.866742 | 2.281875e-65 | -8.615850e-47 |
| Msa0862100 | Msa1395870 | 0.811838 | 5.730876e-51 | -8.615850e-47 |
| Msa0867890 | Msa1395870 | 0.804538 | 2.058541e-49 | -8.615850e-47 |
| Msa0880710 | Msa1395870 | 0.801196 | 1.009094e-48 | -8.615850e-47 |
| Msa0966420 | Msa1395870 | 0.808341 | 3.247422e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1395870 | MtrunA17_Chr4g0069631 | 97.586 | 497 | 12 | 0 | 1 | 497 | 1 | 497 | 0.0 | 1006 |
| Msa1395870 | MtrunA17_Chr2g0302421 | 67.331 | 502 | 154 | 2 | 6 | 497 | 1 | 502 | 0.0 | 729 |
| Msa1395870 | MtrunA17_Chr7g0271351 | 55.777 | 502 | 211 | 5 | 5 | 497 | 5 | 504 | 0.0 | 600 |
| Msa1395870 | MtrunA17_Chr1g0193211 | 53.529 | 510 | 222 | 4 | 1 | 497 | 1 | 508 | 0.0 | 586 |
| Msa1395870 | MtrunA17_Chr4g0075181 | 52.015 | 521 | 224 | 4 | 1 | 497 | 1 | 519 | 0.0 | 560 |
| Msa1395870 | MtrunA17_Chr2g0288851 | 51.186 | 506 | 236 | 2 | 3 | 497 | 5 | 510 | 0.0 | 545 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1395870 | AT1G11910.1 | 52.784 | 485 | 222 | 1 | 20 | 497 | 22 | 506 | 0.0 | 558 |
| Msa1395870 | AT1G11910.2 | 52.784 | 485 | 222 | 1 | 20 | 497 | 33 | 517 | 0.0 | 557 |
| Msa1395870 | AT1G62290.1 | 51.935 | 491 | 222 | 3 | 20 | 496 | 22 | 512 | 0.0 | 551 |
| Msa1395870 | AT1G62290.2 | 51.935 | 491 | 222 | 3 | 20 | 496 | 22 | 512 | 0.0 | 551 |
| Msa1395870 | AT4G04460.1 | 48.880 | 491 | 237 | 3 | 18 | 497 | 21 | 508 | 1.28e-180 | 516 |
| Msa1395870 | AT4G04460.2 | 49.091 | 495 | 226 | 5 | 18 | 497 | 21 | 504 | 9.24e-180 | 514 |
| Msa1395870 | AT1G62290.5 | 50.753 | 465 | 215 | 3 | 20 | 470 | 22 | 486 | 1.89e-177 | 507 |
| Msa1395870 | AT1G62290.6 | 50.575 | 435 | 201 | 3 | 20 | 440 | 22 | 456 | 3.26e-162 | 468 |
| Msa1395870 | AT1G62290.4 | 50.575 | 435 | 201 | 3 | 20 | 440 | 22 | 456 | 3.26e-162 | 468 |
| Msa1395870 | AT1G62290.3 | 51.515 | 396 | 178 | 3 | 20 | 401 | 22 | 417 | 2.16e-146 | 426 |
| Msa1395870 | AT4G22050.1 | 40.569 | 281 | 142 | 8 | 25 | 301 | 15 | 274 | 2.97e-49 | 173 |
| Msa1395870 | AT1G69100.1 | 35.125 | 279 | 152 | 9 | 31 | 300 | 22 | 280 | 2.43e-42 | 155 |
| Msa1395870 | AT1G69100.2 | 35.125 | 279 | 152 | 9 | 31 | 300 | 30 | 288 | 2.98e-42 | 155 |
Find 155 sgRNAs with CRISPR-Local
Find 274 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATATGGGGTTAAAGTATT+TGG | 0.173999 | tig0021965:+99387 | Msa1395870:exon |
| TATCTCGATGCACAATATTT+TGG | 0.184859 | tig0021965:+99592 | Msa1395870:CDS |
| CAATGTTTGAATCTGGGTTT+TGG | 0.227356 | tig0021965:-100623 | None:intergenic |
| GGTTCTTGGAGATATATTTC+TGG | 0.239687 | tig0021965:+102231 | Msa1395870:CDS |
| TTCAAAGTGGTGTTTGATAC+TGG | 0.247379 | tig0021965:+99646 | Msa1395870:CDS |
| GACTAGATGACTTGAAAATA+TGG | 0.249296 | tig0021965:+99372 | Msa1395870:exon |
| AGGTAAAATTGTACCTGTTC+TGG | 0.258936 | tig0021965:-101919 | None:intergenic |
| CTGTGATCTGCTTGTGGGCT+TGG | 0.264891 | tig0021965:+99413 | Msa1395870:CDS |
| ATACTGGGAGCTCCAATCTT+TGG | 0.285088 | tig0021965:+99662 | Msa1395870:CDS |
| GGAATGTGTCCACGGCTAAA+AGG | 0.285782 | tig0021965:-99990 | None:intergenic |
| TCACCTCCAATGTTTGAATC+TGG | 0.287305 | tig0021965:-100630 | None:intergenic |
| ATTATAGAGTAGTGATAAAA+TGG | 0.288861 | tig0021965:-102682 | None:intergenic |
| CAGGGCCGTCTCTAGGTAAT+TGG | 0.289845 | tig0021965:+102705 | Msa1395870:three_prime_UTR |
| TTTAGCCGTGGACACATTCC+TGG | 0.304270 | tig0021965:+99993 | Msa1395870:CDS |
| ATACCTATGGTGATTCGATA+TGG | 0.307900 | tig0021965:+101251 | Msa1395870:CDS |
| GATTACAAAGGAAGGATCTT+TGG | 0.314421 | tig0021965:+100286 | Msa1395870:CDS |
| TACTGGGAGCTCCAATCTTT+GGG | 0.314929 | tig0021965:+99663 | Msa1395870:CDS |
| AATATAATTTGTGGCATAGT+TGG | 0.317898 | tig0021965:-101865 | None:intergenic |
| ATGTCGACGCATATAATTTC+AGG | 0.330084 | tig0021965:-101389 | None:intergenic |
| GTGGGCTTGGTTCCAATCCT+TGG | 0.334099 | tig0021965:+99426 | Msa1395870:CDS |
| CTCTAACACTAATCTTTATC+AGG | 0.334182 | tig0021965:+98563 | Msa1395870:five_prime_UTR |
| GTCAAGATAATTTAAAAGTT+GGG | 0.344229 | tig0021965:+100024 | Msa1395870:CDS |
| TTTATCACTACTCTATAATC+AGG | 0.345941 | tig0021965:+102686 | Msa1395870:three_prime_UTR |
| ACAGACCCGGGTTCGATTCC+CGG | 0.357479 | tig0021965:-102445 | None:intergenic |
| AGTCAAGATAATTTAAAAGT+TGG | 0.358266 | tig0021965:+100023 | Msa1395870:CDS |
| ATATGGGAATTCATAACTAA+TGG | 0.363388 | tig0021965:+101268 | Msa1395870:CDS |
| CACCTCCAATGTTTGAATCT+GGG | 0.367366 | tig0021965:-100629 | None:intergenic |
| TCAGCAATAGAGCAATAAAT+AGG | 0.368947 | tig0021965:+102389 | Msa1395870:three_prime_UTR |
| TATGGGAATTCATAACTAAT+GGG | 0.370287 | tig0021965:+101269 | Msa1395870:CDS |
| CAATAGCCCTGTTGAGAAAC+TGG | 0.374977 | tig0021965:-100708 | None:intergenic |
| TATGCGACATGATTGTGTTT+TGG | 0.375384 | tig0021965:+101622 | Msa1395870:CDS |
| CCACAAATTATATTCAAGAT+TGG | 0.377100 | tig0021965:+101874 | Msa1395870:CDS |
| TTATGTTCCAGTTTCTCAAC+AGG | 0.378641 | tig0021965:+100701 | Msa1395870:CDS |
| GTTCTTGGAGATATATTTCT+GGG | 0.385418 | tig0021965:+102232 | Msa1395870:CDS |
| GGAAGATGGGACCCAAAGAT+TGG | 0.393134 | tig0021965:-99674 | None:intergenic |
| CTTGTCCAACTGAAATATCT+TGG | 0.399718 | tig0021965:-100352 | None:intergenic |
| CCAATCTTGAATATAATTTG+TGG | 0.401246 | tig0021965:-101874 | None:intergenic |
| GATAATTTGCATTTGGAAGA+TGG | 0.403424 | tig0021965:-99688 | None:intergenic |
| TCAGGAACATCTTTAATTGC+TGG | 0.405484 | tig0021965:+101069 | Msa1395870:CDS |
| TTCTCTGCTTAAGCTGAACT+TGG | 0.407447 | tig0021965:-101647 | None:intergenic |
| ACTTACAGATAATTTGCATT+TGG | 0.409048 | tig0021965:-99695 | None:intergenic |
| ACCCGGGTCTGTACCGTGGC+AGG | 0.409474 | tig0021965:+102456 | Msa1395870:three_prime_UTR |
| TAAGTAAATTTGTTAGCATT+GGG | 0.410588 | tig0021965:+102596 | Msa1395870:three_prime_UTR |
| TGGTTGCAATGCAGGGTTCT+TGG | 0.411878 | tig0021965:+102217 | Msa1395870:intron |
| GAGAAACTGGAACATAAGTA+TGG | 0.414422 | tig0021965:-100695 | None:intergenic |
| AACACCACTTTGAAGATTTG+TGG | 0.416237 | tig0021965:-99637 | None:intergenic |
| AAATGATTGTCCCACTGGAT+TGG | 0.419222 | tig0021965:-101824 | None:intergenic |
| CAGTTTCTCAACAGGGCTAT+TGG | 0.422671 | tig0021965:+100709 | Msa1395870:CDS |
| GGTAACTGTGATCTGCTTGT+GGG | 0.423949 | tig0021965:+99408 | Msa1395870:CDS |
| ACTAGATGACTTGAAAATAT+GGG | 0.425541 | tig0021965:+99373 | Msa1395870:exon |
| TTAAGTAAATTTGTTAGCAT+TGG | 0.427900 | tig0021965:+102595 | Msa1395870:three_prime_UTR |
| AATGATTGTCCCACTGGATT+GGG | 0.429612 | tig0021965:-101823 | None:intergenic |
| TGTGTAAGTGCTAGATAGCT+TGG | 0.430995 | tig0021965:-99831 | None:intergenic |
| GCTTCTGCAACTTCTAATGA+AGG | 0.432551 | tig0021965:+99448 | Msa1395870:CDS |
| GCTACATTCATTCCAAGTAT+AGG | 0.435596 | tig0021965:+99807 | Msa1395870:CDS |
| CTCCTCCACAGGGTCCTCTC+TGG | 0.437105 | tig0021965:+102112 | Msa1395870:CDS |
| TATAGATGTGCCTCCTCCAC+AGG | 0.438696 | tig0021965:+102101 | Msa1395870:CDS |
| GAATGTGTCCACGGCTAAAA+GGG | 0.452384 | tig0021965:-99989 | None:intergenic |
| TTTATAAATGATTGTCCCAC+TGG | 0.452717 | tig0021965:-101829 | None:intergenic |
| ATTTCCTCTATCTCCAGAAC+AGG | 0.455816 | tig0021965:+101906 | Msa1395870:CDS |
| CACCAGCCGGGAATCGAACC+CGG | 0.457440 | tig0021965:+102439 | Msa1395870:three_prime_UTR |
| AGATAGCTTGGACCTATACT+TGG | 0.461811 | tig0021965:-99819 | None:intergenic |
| TGATAAAATGGATGTCATAA+AGG | 0.463357 | tig0021965:-102670 | None:intergenic |
| ATAATTTGCATTTGGAAGAT+GGG | 0.473403 | tig0021965:-99687 | None:intergenic |
| TTTCATCTTTAGATTGATGT+TGG | 0.476903 | tig0021965:+100815 | Msa1395870:intron |
| GGAGGTGAGATTGTGTTTGG+TGG | 0.478829 | tig0021965:+100645 | Msa1395870:CDS |
| TGTACCTGTTCTGGAGATAG+AGG | 0.479246 | tig0021965:-101910 | None:intergenic |
| ATTGGACTCTGCTCACGTAA+TGG | 0.483111 | tig0021965:+101410 | Msa1395870:CDS |
| TGGTAACTGTGATCTGCTTG+TGG | 0.483433 | tig0021965:+99407 | Msa1395870:CDS |
| ATTGGAGGTGAGATTGTGTT+TGG | 0.484906 | tig0021965:+100642 | Msa1395870:CDS |
| TACCTATGGTGATTCGATAT+GGG | 0.484972 | tig0021965:+101252 | Msa1395870:CDS |
| TTGTGTTTGGTGGTATTGAC+TGG | 0.485792 | tig0021965:+100655 | Msa1395870:CDS |
| TTCTCAACAGGGCTATTGGC+AGG | 0.489968 | tig0021965:+100713 | Msa1395870:CDS |
| CTTCTAATGAAGGGTTAATG+AGG | 0.496154 | tig0021965:+99458 | Msa1395870:CDS |
| TGAAGCTGCATAGACTTAGT+AGG | 0.497672 | tig0021965:+102303 | Msa1395870:exon |
| AGTGGTAGACGATGAAAGTT+GGG | 0.502040 | tig0021965:+101563 | Msa1395870:CDS |
| GAAATTATATGCGTCGACAT+TGG | 0.502631 | tig0021965:+101392 | Msa1395870:CDS |
| AGCAATAAATAGGCTGCTCA+TGG | 0.504517 | tig0021965:+102399 | Msa1395870:three_prime_UTR |
| CTACTTGAAAACAATTCGAC+AGG | 0.506430 | tig0021965:+100845 | Msa1395870:CDS |
| GCTGAAACTGTGATTAACAT+TGG | 0.506700 | tig0021965:+99350 | Msa1395870:five_prime_UTR |
| CTATAATCAGGGCCGTCTCT+AGG | 0.510910 | tig0021965:+102698 | Msa1395870:three_prime_UTR |
| GAATATCATCATCAAAGATC+AGG | 0.511716 | tig0021965:+100046 | Msa1395870:CDS |
| TGTTCTAGTGTCTGCTATGG+AGG | 0.512921 | tig0021965:+102069 | Msa1395870:CDS |
| GGCCGTCTCTAGGTAATTGG+AGG | 0.513679 | tig0021965:+102708 | Msa1395870:three_prime_UTR |
| CAAAACCCAGATTCAAACAT+TGG | 0.517182 | tig0021965:+100624 | Msa1395870:CDS |
| AACCATGCCATTGGAGCTGA+AGG | 0.519594 | tig0021965:+101196 | Msa1395870:CDS |
| CAGTGGTAGACGATGAAAGT+TGG | 0.522995 | tig0021965:+101562 | Msa1395870:CDS |
| ATATCGAATCACCATAGGTA+TGG | 0.523540 | tig0021965:-101249 | None:intergenic |
| TCAAAGTGGTGTTTGATACT+GGG | 0.526507 | tig0021965:+99647 | Msa1395870:CDS |
| ACCCGGGTTCGATTCCCGGC+TGG | 0.528271 | tig0021965:-102441 | None:intergenic |
| TATGTACTAAGAGTTGAAGA+AGG | 0.533465 | tig0021965:+102045 | Msa1395870:CDS |
| GGATTCCAAGATATTTCAGT+TGG | 0.535246 | tig0021965:+100347 | Msa1395870:CDS |
| CAGAGAGGACCCTGTGGAGG+AGG | 0.536022 | tig0021965:-102111 | None:intergenic |
| GCAATAAATAGGCTGCTCAT+GGG | 0.538558 | tig0021965:+102400 | Msa1395870:three_prime_UTR |
| ATTAGAAGTTGCAGAAGCCA+AGG | 0.540207 | tig0021965:-99443 | None:intergenic |
| ACCAGCCGGGAATCGAACCC+GGG | 0.544602 | tig0021965:+102440 | Msa1395870:three_prime_UTR |
| AAGTTGCAGAAGCCAAGGAT+TGG | 0.545355 | tig0021965:-99438 | None:intergenic |
| ACTCAAATTAACCATGCCAT+TGG | 0.549157 | tig0021965:+101187 | Msa1395870:CDS |
| ACCCTGCCACGGTACAGACC+CGG | 0.550647 | tig0021965:-102458 | None:intergenic |
| TTTACTGAGATTACAAAGGA+AGG | 0.552147 | tig0021965:+100278 | Msa1395870:CDS |
| TTATCTTGACTGAAGAAGCC+AGG | 0.552739 | tig0021965:-100011 | None:intergenic |
| AACATACCCTTCAGCTCCAA+TGG | 0.555618 | tig0021965:-101203 | None:intergenic |
| CTTCTGCAACTTCTAATGAA+GGG | 0.557919 | tig0021965:+99449 | Msa1395870:CDS |
| AATAATAAAATATGTTGATG+AGG | 0.560714 | tig0021965:+101683 | Msa1395870:CDS |
| CTATTCTACCACTAGACCAC+TGG | 0.563833 | tig0021965:+102482 | Msa1395870:three_prime_UTR |
| TTATCACTACTCTATAATCA+GGG | 0.567034 | tig0021965:+102687 | Msa1395870:three_prime_UTR |
| GGGTGTTCTAGTGTCTGCTA+TGG | 0.570604 | tig0021965:+102066 | Msa1395870:CDS |
| TCTCTAGGTAATTGGAGGCT+CGG | 0.570657 | tig0021965:+102713 | Msa1395870:three_prime_UTR |
| GATTATGGAAATCTCCGTGT+GGG | 0.571367 | tig0021965:+102274 | Msa1395870:CDS |
| TTTGACGGGATACTTGGACT+TGG | 0.575605 | tig0021965:+100326 | Msa1395870:CDS |
| ACCCTTCAGCTCCAATGGCA+TGG | 0.578105 | tig0021965:-101198 | None:intergenic |
| TCTTGGAGATATATTTCTGG+GGG | 0.585135 | tig0021965:+102234 | Msa1395870:CDS |
| ATAGATGTGCCTCCTCCACA+GGG | 0.591973 | tig0021965:+102102 | Msa1395870:CDS |
| GTCAAATAAAATACACTACA+AGG | 0.594406 | tig0021965:-102521 | None:intergenic |
| CCCGGGTCTGTACCGTGGCA+GGG | 0.597108 | tig0021965:+102457 | Msa1395870:three_prime_UTR |
| GAAAAGCACCAGTGGTCTAG+TGG | 0.597259 | tig0021965:-102490 | None:intergenic |
| CAATAAATAGGCTGCTCATG+GGG | 0.599936 | tig0021965:+102401 | Msa1395870:three_prime_UTR |
| CATGTCGCATAAAGTACACA+AGG | 0.602609 | tig0021965:-101610 | None:intergenic |
| AGCCTCCAATTACCTAGAGA+CGG | 0.605127 | tig0021965:-102710 | None:intergenic |
| GTTGGGATGAGACACAAAGT+AGG | 0.606352 | tig0021965:+101580 | Msa1395870:CDS |
| TACCAGAGAGGACCCTGTGG+AGG | 0.608191 | tig0021965:-102114 | None:intergenic |
| CTAGATGACTTGAAAATATG+GGG | 0.611370 | tig0021965:+99374 | Msa1395870:exon |
| AGGTATAATATGATAGAACA+AGG | 0.611964 | tig0021965:+100564 | Msa1395870:intron |
| TTGGGATGAGACACAAAGTA+GGG | 0.612456 | tig0021965:+101581 | Msa1395870:CDS |
| TTAACGCTCTAAATTCTGCA+AGG | 0.618906 | tig0021965:+99509 | Msa1395870:CDS |
| ATAAAGATTAGTGTTAGAGT+AGG | 0.620158 | tig0021965:-98559 | None:intergenic |
| GGAATTTACTGAGATTACAA+AGG | 0.622629 | tig0021965:+100274 | Msa1395870:intron |
| TGTGCCGCGATTATTGACTC+AGG | 0.623796 | tig0021965:+101051 | Msa1395870:CDS |
| ATGTACTAAGAGTTGAAGAA+GGG | 0.624970 | tig0021965:+102046 | Msa1395870:CDS |
| AACCCAGATTCAAACATTGG+AGG | 0.625934 | tig0021965:+100627 | Msa1395870:CDS |
| TATGTTCCAGTTTCTCAACA+GGG | 0.628853 | tig0021965:+100702 | Msa1395870:CDS |
| ATGGGAATTCATAACTAATG+GGG | 0.628958 | tig0021965:+101270 | Msa1395870:CDS |
| ACCACTTTGAAGATTTGTGG+AGG | 0.630372 | tig0021965:-99634 | None:intergenic |
| CAGCTTCAGCAAATCCCACA+CGG | 0.642372 | tig0021965:-102288 | None:intergenic |
| TTCCCATATCGAATCACCAT+AGG | 0.643813 | tig0021965:-101254 | None:intergenic |
| TTCTTGGAGATATATTTCTG+GGG | 0.646685 | tig0021965:+102233 | Msa1395870:CDS |
| ACCTCCACAAATCTTCAAAG+TGG | 0.648170 | tig0021965:+99633 | Msa1395870:CDS |
| AGAAGCCAGGAATGTGTCCA+CGG | 0.656995 | tig0021965:-99998 | None:intergenic |
| TGAGAAGCTACCCAATCCAG+TGG | 0.660492 | tig0021965:+101813 | Msa1395870:CDS |
| TCGAACCCGGGTCTGTACCG+TGG | 0.661120 | tig0021965:+102452 | Msa1395870:three_prime_UTR |
| AGTTTCAGCAGAAGCAACGA+AGG | 0.662644 | tig0021965:-99336 | None:intergenic |
| AAATCAATAGGGCTATGTCA+AGG | 0.662671 | tig0021965:+101024 | Msa1395870:intron |
| TGATTATGGAAATCTCCGTG+TGG | 0.667778 | tig0021965:+102273 | Msa1395870:CDS |
| CAGTGATGATATTGAAACAG+TGG | 0.686591 | tig0021965:+101545 | Msa1395870:intron |
| GGTATAATATGATAGAACAA+GGG | 0.688465 | tig0021965:+100565 | Msa1395870:intron |
| ACCATGCCATTGGAGCTGAA+GGG | 0.691078 | tig0021965:+101197 | Msa1395870:CDS |
| GAGAAGCTACCCAATCCAGT+GGG | 0.692021 | tig0021965:+101814 | Msa1395870:CDS |
| TGTTCCTGAGTCAATAATCG+CGG | 0.696071 | tig0021965:-101055 | None:intergenic |
| ATGTCGCATAAAGTACACAA+GGG | 0.700023 | tig0021965:-101609 | None:intergenic |
| TCAATAGGGCTATGTCAAGG+TGG | 0.702696 | tig0021965:+101027 | Msa1395870:intron |
| TATATGCTAAGTTACCACAC+TGG | 0.703089 | tig0021965:-100380 | None:intergenic |
| ACTAAACAGAAAAGCACCAG+TGG | 0.703487 | tig0021965:-102498 | None:intergenic |
| TGTCGCATAAAGTACACAAG+GGG | 0.704481 | tig0021965:-101608 | None:intergenic |
| GGTAGAATAGTACCCTGCCA+CGG | 0.710817 | tig0021965:-102469 | None:intergenic |
| TTGGACAAGTCACACCAGTG+TGG | 0.751446 | tig0021965:+100366 | Msa1395870:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAATAAATACAAG+GGG | - | tig0021965:98750-98769 | None:intergenic | 10.0% |
| !! | GAAAAAAAAAATAAATACAA+GGG | - | tig0021965:98751-98770 | None:intergenic | 10.0% |
| !!! | ATAAATTTTTTTTTTTGAGA+CGG | - | tig0021965:98828-98847 | None:intergenic | 10.0% |
| !!! | AAAAAATTTATTTCTACTAT+TGG | + | tig0021965:98837-98856 | Msa1395870:intron | 10.0% |
| !! | ATATAAAAGTTAAATCAATA+GGG | + | tig0021965:101013-101032 | Msa1395870:intron | 10.0% |
| !! | GGAAAAAAAAAATAAATACA+AGG | - | tig0021965:98752-98771 | None:intergenic | 15.0% |
| !!! | ATTCAAACTATTTTTTTTGT+TGG | + | tig0021965:99882-99901 | Msa1395870:intron | 15.0% |
| !! | ATCATAATAGTGATTTAAAA+AGG | - | tig0021965:100096-100115 | None:intergenic | 15.0% |
| !!! | TCATTTTCAAAAATTGTTAA+TGG | + | tig0021965:100202-100221 | Msa1395870:intron | 15.0% |
| !! | TCATAAAAAACTAGAAATAA+AGG | - | tig0021965:100507-100526 | None:intergenic | 15.0% |
| !! | TAAGTTATCTTAATAAATAC+AGG | + | tig0021965:100544-100563 | Msa1395870:intron | 15.0% |
| !!! | ATTACATCATTTTATACTAT+TGG | + | tig0021965:100977-100996 | Msa1395870:intron | 15.0% |
| !! | GATATAAAAGTTAAATCAAT+AGG | + | tig0021965:101012-101031 | Msa1395870:intron | 15.0% |
| !! | AATAATAAAATATGTTGATG+AGG | + | tig0021965:101683-101702 | Msa1395870:CDS | 15.0% |
| !!! | CAAATTTATTTCTACTCTTT+AGG | + | tig0021965:98600-98619 | Msa1395870:intron | 20.0% |
| !!! | AAAAGCATGAAAATATTTCA+AGG | - | tig0021965:98889-98908 | None:intergenic | 20.0% |
| !! | ATTTCATAAAATCATTGCAT+AGG | - | tig0021965:98949-98968 | None:intergenic | 20.0% |
| !! | TAAAATTAAAGCATATCTGA+AGG | - | tig0021965:99727-99746 | None:intergenic | 20.0% |
| !!! | TATTGATTTTGAAATAAGCT+AGG | - | tig0021965:99750-99769 | None:intergenic | 20.0% |
| !! | AAAAATAGGTAACTTTGAAT+TGG | + | tig0021965:99853-99872 | Msa1395870:intron | 20.0% |
| !!! | TTTTTGTTTGGAAAATGTTT+AGG | + | tig0021965:99951-99970 | Msa1395870:intron | 20.0% |
| !! | AGTCAAGATAATTTAAAAGT+TGG | + | tig0021965:100023-100042 | Msa1395870:CDS | 20.0% |
| !! | GTCAAGATAATTTAAAAGTT+GGG | + | tig0021965:100024-100043 | Msa1395870:CDS | 20.0% |
| !! | ATAACTTATCAATAGATGTA+AGG | - | tig0021965:100532-100551 | None:intergenic | 20.0% |
| !!! | CACTAATTTTTTTTTTACAG+TGG | - | tig0021965:100929-100948 | None:intergenic | 20.0% |
| !! | CACTGTAAAAAAAAAATTAG+TGG | + | tig0021965:100927-100946 | Msa1395870:intron | 20.0% |
| !!! | TCTTTTTTTTTTGTTTGTTG+TGG | + | tig0021965:102010-102029 | Msa1395870:intron | 20.0% |
| !!! | TTGTAGTGTATTTTATTTGA+CGG | + | tig0021965:102523-102542 | Msa1395870:three_prime_UTR | 20.0% |
| !!! | TTAAGTAAATTTGTTAGCAT+TGG | + | tig0021965:102595-102614 | Msa1395870:three_prime_UTR | 20.0% |
| !!! | TAAGTAAATTTGTTAGCATT+GGG | + | tig0021965:102596-102615 | Msa1395870:three_prime_UTR | 20.0% |
| !! | ATTATAGAGTAGTGATAAAA+TGG | - | tig0021965:102685-102704 | None:intergenic | 20.0% |
| ! | ATAAAGATTAGTGTTAGAGT+AGG | - | tig0021965:98562-98581 | None:intergenic | 25.0% |
| ! | AAATAAATACAAGGGGAAAT+CGG | - | tig0021965:98743-98762 | None:intergenic | 25.0% |
| ! | ATCAATCAAGTAAGTGTATA+TGG | - | tig0021965:99295-99314 | None:intergenic | 25.0% |
| ! | ACTAGATGACTTGAAAATAT+GGG | + | tig0021965:99373-99392 | Msa1395870:exon | 25.0% |
| !! | AAATATGGGGTTAAAGTATT+TGG | + | tig0021965:99387-99406 | Msa1395870:exon | 25.0% |
| !! | ATAATTTGCATTTGGAAGAT+GGG | - | tig0021965:99690-99709 | None:intergenic | 25.0% |
| !! | ACTTACAGATAATTTGCATT+TGG | - | tig0021965:99698-99717 | None:intergenic | 25.0% |
| !!! | TTTTTAGCAATGCATTTTGA+CGG | + | tig0021965:100311-100330 | Msa1395870:CDS | 25.0% |
| ! | TACATAGAAATGAACTCATA+AGG | - | tig0021965:100413-100432 | None:intergenic | 25.0% |
| ! | AGGTATAATATGATAGAACA+AGG | + | tig0021965:100564-100583 | Msa1395870:intron | 25.0% |
| ! | GGTATAATATGATAGAACAA+GGG | + | tig0021965:100565-100584 | Msa1395870:intron | 25.0% |
| ! | TTTCATCTTTAGATTGATGT+TGG | + | tig0021965:100815-100834 | Msa1395870:intron | 25.0% |
| ! | AGGCATTTATATATGAAACA+TGG | - | tig0021965:100895-100914 | None:intergenic | 25.0% |
| !!! | TTTTTTTGTTAGACTTCGTT+AGG | + | tig0021965:101124-101143 | Msa1395870:intron | 25.0% |
| ! | AAAAATATCATCCATACCTA+TGG | + | tig0021965:101238-101257 | Msa1395870:CDS | 25.0% |
| ! | ATATGGGAATTCATAACTAA+TGG | + | tig0021965:101268-101287 | Msa1395870:CDS | 25.0% |
| ! | TATGGGAATTCATAACTAAT+GGG | + | tig0021965:101269-101288 | Msa1395870:CDS | 25.0% |
| ! | TGATTGTCATTGGAATTTAA+TGG | + | tig0021965:101328-101347 | Msa1395870:intron | 25.0% |
| ! | CATAAGCTATATGTAAAGAA+TGG | - | tig0021965:101356-101375 | None:intergenic | 25.0% |
| ! | TTATCCTTTATATCCAAGTA+AGG | + | tig0021965:101741-101760 | Msa1395870:intron | 25.0% |
| !! | AATATAATTTGTGGCATAGT+TGG | - | tig0021965:101868-101887 | None:intergenic | 25.0% |
| ! | CCAATCTTGAATATAATTTG+TGG | - | tig0021965:101877-101896 | None:intergenic | 25.0% |
| ! | CCACAAATTATATTCAAGAT+TGG | + | tig0021965:101874-101893 | Msa1395870:CDS | 25.0% |
| ! | GAGAAATAAACAAAACTTCA+AGG | - | tig0021965:101942-101961 | None:intergenic | 25.0% |
| !!! | ATAATCATTTTTTACCAGAG+AGG | - | tig0021965:102129-102148 | None:intergenic | 25.0% |
| !! | TGCATATGATTTTCATTTCA+TGG | + | tig0021965:102170-102189 | Msa1395870:intron | 25.0% |
| !!! | TACCATACAGTTTTTGATTA+TGG | + | tig0021965:102259-102278 | Msa1395870:CDS | 25.0% |
| ! | TTCCATAATCAAAAACTGTA+TGG | - | tig0021965:102264-102283 | None:intergenic | 25.0% |
| !! | GATAAAGATTTTCATCTCAA+AGG | + | tig0021965:102344-102363 | Msa1395870:three_prime_UTR | 25.0% |
| ! | GTCAAATAAAATACACTACA+AGG | - | tig0021965:102524-102543 | None:intergenic | 25.0% |
| !! | TAATTTTTATGCTTCAGTAC+AGG | + | tig0021965:102628-102647 | Msa1395870:three_prime_UTR | 25.0% |
| ! | TGATAAAATGGATGTCATAA+AGG | - | tig0021965:102673-102692 | None:intergenic | 25.0% |
| ! | TTTATCACTACTCTATAATC+AGG | + | tig0021965:102686-102705 | Msa1395870:three_prime_UTR | 25.0% |
| ! | TTATCACTACTCTATAATCA+GGG | + | tig0021965:102687-102706 | Msa1395870:three_prime_UTR | 25.0% |
| CTCTAACACTAATCTTTATC+AGG | + | tig0021965:98563-98582 | Msa1395870:five_prime_UTR | 30.0% | |
| TATTTCAAGGTTAGACTTCA+AGG | - | tig0021965:98876-98895 | None:intergenic | 30.0% | |
| AAAATCATTGCATAGGTCAA+AGG | - | tig0021965:98942-98961 | None:intergenic | 30.0% | |
| GACTAGATGACTTGAAAATA+TGG | + | tig0021965:99372-99391 | Msa1395870:exon | 30.0% | |
| CTAGATGACTTGAAAATATG+GGG | + | tig0021965:99374-99393 | Msa1395870:exon | 30.0% | |
| !! | TGAGGATTAGTCTAAAAAGA+AGG | + | tig0021965:99476-99495 | Msa1395870:CDS | 30.0% |
| ! | TATCTCGATGCACAATATTT+TGG | + | tig0021965:99592-99611 | Msa1395870:CDS | 30.0% |
| !!! | TATTTTGGTGAGATTGGTAT+TGG | + | tig0021965:99607-99626 | Msa1395870:CDS | 30.0% |
| !! | ATTTTGGTGAGATTGGTATT+GGG | + | tig0021965:99608-99627 | Msa1395870:CDS | 30.0% |
| ! | GATAATTTGCATTTGGAAGA+TGG | - | tig0021965:99691-99710 | None:intergenic | 30.0% |
| TCTAGCACTTACACAAAAAT+AGG | + | tig0021965:99839-99858 | Msa1395870:CDS | 30.0% | |
| ! | CGTATTCAGAAGTTTTTGTT+TGG | + | tig0021965:99939-99958 | Msa1395870:intron | 30.0% |
| GAATATCATCATCAAAGATC+AGG | + | tig0021965:100046-100065 | Msa1395870:CDS | 30.0% | |
| GGAATTTACTGAGATTACAA+AGG | + | tig0021965:100274-100293 | Msa1395870:intron | 30.0% | |
| TTTACTGAGATTACAAAGGA+AGG | + | tig0021965:100278-100297 | Msa1395870:CDS | 30.0% | |
| !! | TTTTAGCAATGCATTTTGAC+GGG | + | tig0021965:100312-100331 | Msa1395870:CDS | 30.0% |
| ! | CTCAAAAGATTTTCTCACTT+TGG | + | tig0021965:100595-100614 | Msa1395870:CDS | 30.0% |
| !! | TATTGACTGGAGACATTTTA+GGG | + | tig0021965:100668-100687 | Msa1395870:CDS | 30.0% |
| !!! | ACCATGTCATCATTGATTTT+TGG | + | tig0021965:100789-100808 | Msa1395870:intron | 30.0% |
| ACCAAAAATCAATGATGACA+TGG | - | tig0021965:100793-100812 | None:intergenic | 30.0% | |
| ATGTTAAGATGTCATACTGT+TGG | - | tig0021965:101096-101115 | None:intergenic | 30.0% | |
| ATGGGAATTCATAACTAATG+GGG | + | tig0021965:101270-101289 | Msa1395870:CDS | 30.0% | |
| !! | TTTTGAGTGTGAGGATAAAA+GGG | - | tig0021965:101308-101327 | None:intergenic | 30.0% |
| !! | ATTTTGAGTGTGAGGATAAA+AGG | - | tig0021965:101309-101328 | None:intergenic | 30.0% |
| ACACTCAAAATGATTGTCAT+TGG | + | tig0021965:101318-101337 | Msa1395870:intron | 30.0% | |
| AAGTCCTTACTTGGATATAA+AGG | - | tig0021965:101748-101767 | None:intergenic | 30.0% | |
| AAATTTGTCAAGTCCTTACT+TGG | - | tig0021965:101757-101776 | None:intergenic | 30.0% | |
| TTTATAAATGATTGTCCCAC+TGG | - | tig0021965:101832-101851 | None:intergenic | 30.0% | |
| TATGTACTAAGAGTTGAAGA+AGG | + | tig0021965:102045-102064 | Msa1395870:CDS | 30.0% | |
| ATGTACTAAGAGTTGAAGAA+GGG | + | tig0021965:102046-102065 | Msa1395870:CDS | 30.0% | |
| TTTCATTTCATGGTGTATGA+TGG | + | tig0021965:102180-102199 | Msa1395870:intron | 30.0% | |
| GTTCTTGGAGATATATTTCT+GGG | + | tig0021965:102232-102251 | Msa1395870:CDS | 30.0% | |
| ! | TTCTTGGAGATATATTTCTG+GGG | + | tig0021965:102233-102252 | Msa1395870:CDS | 30.0% |
| ! | GTCCTCTAAAAAAATCTCAA+AGG | + | tig0021965:102366-102385 | Msa1395870:three_prime_UTR | 30.0% |
| !!! | GACCTTTGAGATTTTTTTAG+AGG | - | tig0021965:102371-102390 | None:intergenic | 30.0% |
| TCAGCAATAGAGCAATAAAT+AGG | + | tig0021965:102389-102408 | Msa1395870:three_prime_UTR | 30.0% | |
| ! | AAAAAATATTTTGCACCAGC+CGG | + | tig0021965:102426-102445 | Msa1395870:three_prime_UTR | 30.0% |
| GACTTGCATCATTACTCTTT+AGG | + | tig0021965:98654-98673 | Msa1395870:intron | 35.0% | |
| TTACTCTTTAGGCTTGTCTT+CGG | + | tig0021965:98665-98684 | Msa1395870:intron | 35.0% | |
| CAAGATGCACTAACAAGTTT+GGG | - | tig0021965:98777-98796 | None:intergenic | 35.0% | |
| AATATGCTTTAGCGTATGCT+TGG | + | tig0021965:99024-99043 | Msa1395870:intron | 35.0% | |
| GCTGAAACTGTGATTAACAT+TGG | + | tig0021965:99350-99369 | Msa1395870:five_prime_UTR | 35.0% | |
| CTTCTGCAACTTCTAATGAA+GGG | + | tig0021965:99449-99468 | Msa1395870:CDS | 35.0% | |
| CTTCTAATGAAGGGTTAATG+AGG | + | tig0021965:99458-99477 | Msa1395870:CDS | 35.0% | |
| ! | TTAACGCTCTAAATTCTGCA+AGG | + | tig0021965:99509-99528 | Msa1395870:CDS | 35.0% |
| !!! | GCACAATATTTTGGTGAGAT+TGG | + | tig0021965:99601-99620 | Msa1395870:CDS | 35.0% |
| ! | AACACCACTTTGAAGATTTG+TGG | - | tig0021965:99640-99659 | None:intergenic | 35.0% |
| TTCAAAGTGGTGTTTGATAC+TGG | + | tig0021965:99646-99665 | Msa1395870:CDS | 35.0% | |
| TCAAAGTGGTGTTTGATACT+GGG | + | tig0021965:99647-99666 | Msa1395870:CDS | 35.0% | |
| GCTACATTCATTCCAAGTAT+AGG | + | tig0021965:99807-99826 | Msa1395870:CDS | 35.0% | |
| TAATCTCAGTAAATTCCTGC+AGG | - | tig0021965:100271-100290 | None:intergenic | 35.0% | |
| GATTACAAAGGAAGGATCTT+TGG | + | tig0021965:100286-100305 | Msa1395870:CDS | 35.0% | |
| GGATTCCAAGATATTTCAGT+TGG | + | tig0021965:100347-100366 | Msa1395870:CDS | 35.0% | |
| CTTGTCCAACTGAAATATCT+TGG | - | tig0021965:100355-100374 | None:intergenic | 35.0% | |
| TATATGCTAAGTTACCACAC+TGG | - | tig0021965:100383-100402 | None:intergenic | 35.0% | |
| ! | CAATGTTTGAATCTGGGTTT+TGG | - | tig0021965:100626-100645 | None:intergenic | 35.0% |
| CAAAACCCAGATTCAAACAT+TGG | + | tig0021965:100624-100643 | Msa1395870:CDS | 35.0% | |
| !!! | GTATTGACTGGAGACATTTT+AGG | + | tig0021965:100667-100686 | Msa1395870:CDS | 35.0% |
| ! | ATTGACTGGAGACATTTTAG+GGG | + | tig0021965:100669-100688 | Msa1395870:CDS | 35.0% |
| GAGAAACTGGAACATAAGTA+TGG | - | tig0021965:100698-100717 | None:intergenic | 35.0% | |
| TTATGTTCCAGTTTCTCAAC+AGG | + | tig0021965:100701-100720 | Msa1395870:CDS | 35.0% | |
| TATGTTCCAGTTTCTCAACA+GGG | + | tig0021965:100702-100721 | Msa1395870:CDS | 35.0% | |
| CTACTTGAAAACAATTCGAC+AGG | + | tig0021965:100845-100864 | Msa1395870:CDS | 35.0% | |
| AAATCAATAGGGCTATGTCA+AGG | + | tig0021965:101024-101043 | Msa1395870:intron | 35.0% | |
| TCAGGAACATCTTTAATTGC+TGG | + | tig0021965:101069-101088 | Msa1395870:CDS | 35.0% | |
| ACTCAAATTAACCATGCCAT+TGG | + | tig0021965:101187-101206 | Msa1395870:CDS | 35.0% | |
| ATATCGAATCACCATAGGTA+TGG | - | tig0021965:101252-101271 | None:intergenic | 35.0% | |
| ATACCTATGGTGATTCGATA+TGG | + | tig0021965:101251-101270 | Msa1395870:CDS | 35.0% | |
| TACCTATGGTGATTCGATAT+GGG | + | tig0021965:101252-101271 | Msa1395870:CDS | 35.0% | |
| !! | TGACAATCATTTTGAGTGTG+AGG | - | tig0021965:101317-101336 | None:intergenic | 35.0% |
| ATGTCGACGCATATAATTTC+AGG | - | tig0021965:101392-101411 | None:intergenic | 35.0% | |
| ! | GAAATTATATGCGTCGACAT+TGG | + | tig0021965:101392-101411 | Msa1395870:CDS | 35.0% |
| AAATAATCAAGAGGAAGGGA+TGG | - | tig0021965:101472-101491 | None:intergenic | 35.0% | |
| ATCCCTTCCTCTTGATTATT+TGG | + | tig0021965:101471-101490 | Msa1395870:intron | 35.0% | |
| CTCCAAATAATCAAGAGGAA+GGG | - | tig0021965:101476-101495 | None:intergenic | 35.0% | |
| TCTCCAAATAATCAAGAGGA+AGG | - | tig0021965:101477-101496 | None:intergenic | 35.0% | |
| TGTGTCTCCAAATAATCAAG+AGG | - | tig0021965:101481-101500 | None:intergenic | 35.0% | |
| TATTTGGAGACACATTCCAT+TGG | + | tig0021965:101487-101506 | Msa1395870:intron | 35.0% | |
| TGTTTAGAGAACTGAACCAA+TGG | - | tig0021965:101506-101525 | None:intergenic | 35.0% | |
| CAGTGATGATATTGAAACAG+TGG | + | tig0021965:101545-101564 | Msa1395870:intron | 35.0% | |
| ATGTCGCATAAAGTACACAA+GGG | - | tig0021965:101612-101631 | None:intergenic | 35.0% | |
| ! | TATGCGACATGATTGTGTTT+TGG | + | tig0021965:101622-101641 | Msa1395870:CDS | 35.0% |
| ! | TCTCACATAACTTTTGCACA+AGG | - | tig0021965:101798-101817 | None:intergenic | 35.0% |
| AGGTAAAATTGTACCTGTTC+TGG | - | tig0021965:101922-101941 | None:intergenic | 35.0% | |
| CATGGTGTATGATGGTTAAT+TGG | + | tig0021965:102188-102207 | Msa1395870:intron | 35.0% | |
| GGTTCTTGGAGATATATTTC+TGG | + | tig0021965:102231-102250 | Msa1395870:CDS | 35.0% | |
| !! | TCTTGGAGATATATTTCTGG+GGG | + | tig0021965:102234-102253 | Msa1395870:CDS | 35.0% |
| ! | AAAAATATTTTGCACCAGCC+GGG | + | tig0021965:102427-102446 | Msa1395870:three_prime_UTR | 35.0% |
| ACTCTTTAGGCTTGTCTATG+CGG | + | tig0021965:98613-98632 | Msa1395870:intron | 40.0% | |
| ATGCACTAACAAGTTTGGGT+GGG | - | tig0021965:98773-98792 | None:intergenic | 40.0% | |
| GCAAGATGCACTAACAAGTT+TGG | - | tig0021965:98778-98797 | None:intergenic | 40.0% | |
| ! | ACTTGTTAGTGCATCTTGCA+CGG | + | tig0021965:98779-98798 | Msa1395870:intron | 40.0% |
| ! | GCGTATGCTTGGTTCATTTT+TGG | + | tig0021965:99035-99054 | Msa1395870:intron | 40.0% |
| !!! | GCTTGGTTCATTTTTGGAGT+TGG | + | tig0021965:99041-99060 | Msa1395870:intron | 40.0% |
| GTCATCTTTAGTTGTTCTCG+AGG | + | tig0021965:99077-99096 | Msa1395870:intron | 40.0% | |
| ! | TAAGTGTATATGGCTCTGCA+TGG | - | tig0021965:99285-99304 | None:intergenic | 40.0% |
| ATTAGAAGTTGCAGAAGCCA+AGG | - | tig0021965:99446-99465 | None:intergenic | 40.0% | |
| GCTTCTGCAACTTCTAATGA+AGG | + | tig0021965:99448-99467 | Msa1395870:CDS | 40.0% | |
| ACCTCCACAAATCTTCAAAG+TGG | + | tig0021965:99633-99652 | Msa1395870:CDS | 40.0% | |
| ! | ACCACTTTGAAGATTTGTGG+AGG | - | tig0021965:99637-99656 | None:intergenic | 40.0% |
| AGATAGCTTGGACCTATACT+TGG | - | tig0021965:99822-99841 | None:intergenic | 40.0% | |
| TGTGTAAGTGCTAGATAGCT+TGG | - | tig0021965:99834-99853 | None:intergenic | 40.0% | |
| TTATCTTGACTGAAGAAGCC+AGG | - | tig0021965:100014-100033 | None:intergenic | 40.0% | |
| !! | ATGCATTTTGACGGGATACT+TGG | + | tig0021965:100320-100339 | Msa1395870:CDS | 40.0% |
| AACCCAGATTCAAACATTGG+AGG | + | tig0021965:100627-100646 | Msa1395870:CDS | 40.0% | |
| CACCTCCAATGTTTGAATCT+GGG | - | tig0021965:100632-100651 | None:intergenic | 40.0% | |
| TCACCTCCAATGTTTGAATC+TGG | - | tig0021965:100633-100652 | None:intergenic | 40.0% | |
| ATTGGAGGTGAGATTGTGTT+TGG | + | tig0021965:100642-100661 | Msa1395870:CDS | 40.0% | |
| !! | TTGTGTTTGGTGGTATTGAC+TGG | + | tig0021965:100655-100674 | Msa1395870:CDS | 40.0% |
| TTACAGTGGAGTACAGTACA+AGG | - | tig0021965:100915-100934 | None:intergenic | 40.0% | |
| TGTTCCTGAGTCAATAATCG+CGG | - | tig0021965:101058-101077 | None:intergenic | 40.0% | |
| ! | TAGTTCTTGTTTGCAGAGTG+TGG | + | tig0021965:101162-101181 | Msa1395870:intron | 40.0% |
| TTCCCATATCGAATCACCAT+AGG | - | tig0021965:101257-101276 | None:intergenic | 40.0% | |
| AGTGGTAGACGATGAAAGTT+GGG | + | tig0021965:101563-101582 | Msa1395870:CDS | 40.0% | |
| TTGGGATGAGACACAAAGTA+GGG | + | tig0021965:101581-101600 | Msa1395870:CDS | 40.0% | |
| TGTCGCATAAAGTACACAAG+GGG | - | tig0021965:101611-101630 | None:intergenic | 40.0% | |
| CATGTCGCATAAAGTACACA+AGG | - | tig0021965:101613-101632 | None:intergenic | 40.0% | |
| TTCTCTGCTTAAGCTGAACT+TGG | - | tig0021965:101650-101669 | None:intergenic | 40.0% | |
| AATGATTGTCCCACTGGATT+GGG | - | tig0021965:101826-101845 | None:intergenic | 40.0% | |
| AAATGATTGTCCCACTGGAT+TGG | - | tig0021965:101827-101846 | None:intergenic | 40.0% | |
| ATTTCCTCTATCTCCAGAAC+AGG | + | tig0021965:101906-101925 | Msa1395870:CDS | 40.0% | |
| TGATGGTTAATTGGAGTGTG+TGG | + | tig0021965:102197-102216 | Msa1395870:intron | 40.0% | |
| TGATTATGGAAATCTCCGTG+TGG | + | tig0021965:102273-102292 | Msa1395870:CDS | 40.0% | |
| GATTATGGAAATCTCCGTGT+GGG | + | tig0021965:102274-102293 | Msa1395870:CDS | 40.0% | |
| TGAAGCTGCATAGACTTAGT+AGG | + | tig0021965:102303-102322 | Msa1395870:exon | 40.0% | |
| AGCAATAAATAGGCTGCTCA+TGG | + | tig0021965:102399-102418 | Msa1395870:three_prime_UTR | 40.0% | |
| GCAATAAATAGGCTGCTCAT+GGG | + | tig0021965:102400-102419 | Msa1395870:three_prime_UTR | 40.0% | |
| CAATAAATAGGCTGCTCATG+GGG | + | tig0021965:102401-102420 | Msa1395870:three_prime_UTR | 40.0% | |
| !! | ACTAAACAGAAAAGCACCAG+TGG | - | tig0021965:102501-102520 | None:intergenic | 40.0% |
| ! | TCTATGCGGTGGTTTGTCAT+TGG | + | tig0021965:98627-98646 | Msa1395870:intron | 45.0% |
| TTTAGGCTTGTCTTCGGACT+GGG | + | tig0021965:98671-98690 | Msa1395870:intron | 45.0% | |
| !!! | GGACTGGGGTGGTTTTTTAA+GGG | + | tig0021965:98686-98705 | Msa1395870:intron | 45.0% |
| !!! | GACTGGGGTGGTTTTTTAAG+GGG | + | tig0021965:98687-98706 | Msa1395870:intron | 45.0% |
| GATGCACTAACAAGTTTGGG+TGG | - | tig0021965:98774-98793 | None:intergenic | 45.0% | |
| CTTGTTAGTGCATCTTGCAC+GGG | + | tig0021965:98780-98799 | Msa1395870:intron | 45.0% | |
| AGTTTCAGCAGAAGCAACGA+AGG | - | tig0021965:99339-99358 | None:intergenic | 45.0% | |
| TGGTAACTGTGATCTGCTTG+TGG | + | tig0021965:99407-99426 | Msa1395870:CDS | 45.0% | |
| GGTAACTGTGATCTGCTTGT+GGG | + | tig0021965:99408-99427 | Msa1395870:CDS | 45.0% | |
| AAGTTGCAGAAGCCAAGGAT+TGG | - | tig0021965:99441-99460 | None:intergenic | 45.0% | |
| ATACTGGGAGCTCCAATCTT+TGG | + | tig0021965:99662-99681 | Msa1395870:CDS | 45.0% | |
| TACTGGGAGCTCCAATCTTT+GGG | + | tig0021965:99663-99682 | Msa1395870:CDS | 45.0% | |
| ! | TGCAAAATCCCTTTTAGCCG+TGG | + | tig0021965:99981-100000 | Msa1395870:CDS | 45.0% |
| GAATGTGTCCACGGCTAAAA+GGG | - | tig0021965:99992-100011 | None:intergenic | 45.0% | |
| ATTGACACTCACAGATGCGT+TGG | - | tig0021965:100230-100249 | None:intergenic | 45.0% | |
| ! | TCATAGTGCTGAAATCCTGC+AGG | + | tig0021965:100253-100272 | Msa1395870:intron | 45.0% |
| TTTGACGGGATACTTGGACT+TGG | + | tig0021965:100326-100345 | Msa1395870:CDS | 45.0% | |
| CAATAGCCCTGTTGAGAAAC+TGG | - | tig0021965:100711-100730 | None:intergenic | 45.0% | |
| CAGTTTCTCAACAGGGCTAT+TGG | + | tig0021965:100709-100728 | Msa1395870:CDS | 45.0% | |
| TCAATAGGGCTATGTCAAGG+TGG | + | tig0021965:101027-101046 | Msa1395870:intron | 45.0% | |
| AACATACCCTTCAGCTCCAA+TGG | - | tig0021965:101206-101225 | None:intergenic | 45.0% | |
| ATTGGACTCTGCTCACGTAA+TGG | + | tig0021965:101410-101429 | Msa1395870:CDS | 45.0% | |
| CAGTGGTAGACGATGAAAGT+TGG | + | tig0021965:101562-101581 | Msa1395870:CDS | 45.0% | |
| GTTGGGATGAGACACAAAGT+AGG | + | tig0021965:101580-101599 | Msa1395870:CDS | 45.0% | |
| !! | TGTACCTGTTCTGGAGATAG+AGG | - | tig0021965:101913-101932 | None:intergenic | 45.0% |
| TGTTCTAGTGTCTGCTATGG+AGG | + | tig0021965:102069-102088 | Msa1395870:CDS | 45.0% | |
| !! | GTCTGCTATGGAGGTTTTGT+TGG | + | tig0021965:102078-102097 | Msa1395870:CDS | 45.0% |
| CTATTCTACCACTAGACCAC+TGG | + | tig0021965:102482-102501 | Msa1395870:three_prime_UTR | 45.0% | |
| AGCCTCCAATTACCTAGAGA+CGG | - | tig0021965:102713-102732 | None:intergenic | 45.0% | |
| TCTCTAGGTAATTGGAGGCT+CGG | + | tig0021965:102713-102732 | Msa1395870:three_prime_UTR | 45.0% | |
| !!! | TTTTATAATTTTTTTTGTAA+AGG | - | tig0021965:100469-100488 | None:intergenic | 5.0% |
| CTTTAGGCTTGTCTATGCGG+TGG | + | tig0021965:98616-98635 | Msa1395870:intron | 50.0% | |
| CTTTAGGCTTGTCTTCGGAC+TGG | + | tig0021965:98670-98689 | Msa1395870:intron | 50.0% | |
| TTAGGCTTGTCTTCGGACTG+GGG | + | tig0021965:98672-98691 | Msa1395870:intron | 50.0% | |
| !!! | CGGACTGGGGTGGTTTTTTA+AGG | + | tig0021965:98685-98704 | Msa1395870:intron | 50.0% |
| ! | CTCGAGGAGAGTTGATTGTG+TGG | + | tig0021965:99093-99112 | Msa1395870:intron | 50.0% |
| GGAAGATGGGACCCAAAGAT+TGG | - | tig0021965:99677-99696 | None:intergenic | 50.0% | |
| GGAATGTGTCCACGGCTAAA+AGG | - | tig0021965:99993-100012 | None:intergenic | 50.0% | |
| TTTAGCCGTGGACACATTCC+TGG | + | tig0021965:99993-100012 | Msa1395870:CDS | 50.0% | |
| AGAAGCCAGGAATGTGTCCA+CGG | - | tig0021965:100001-100020 | None:intergenic | 50.0% | |
| TTGGACAAGTCACACCAGTG+TGG | + | tig0021965:100366-100385 | Msa1395870:CDS | 50.0% | |
| GGAGGTGAGATTGTGTTTGG+TGG | + | tig0021965:100645-100664 | Msa1395870:CDS | 50.0% | |
| TTCTCAACAGGGCTATTGGC+AGG | + | tig0021965:100713-100732 | Msa1395870:CDS | 50.0% | |
| !! | TGTGCCGCGATTATTGACTC+AGG | + | tig0021965:101051-101070 | Msa1395870:CDS | 50.0% |
| AACCATGCCATTGGAGCTGA+AGG | + | tig0021965:101196-101215 | Msa1395870:CDS | 50.0% | |
| ACCATGCCATTGGAGCTGAA+GGG | + | tig0021965:101197-101216 | Msa1395870:CDS | 50.0% | |
| TGAGAAGCTACCCAATCCAG+TGG | + | tig0021965:101813-101832 | Msa1395870:CDS | 50.0% | |
| GAGAAGCTACCCAATCCAGT+GGG | + | tig0021965:101814-101833 | Msa1395870:CDS | 50.0% | |
| GGGTGTTCTAGTGTCTGCTA+TGG | + | tig0021965:102066-102085 | Msa1395870:CDS | 50.0% | |
| TATAGATGTGCCTCCTCCAC+AGG | + | tig0021965:102101-102120 | Msa1395870:CDS | 50.0% | |
| ATAGATGTGCCTCCTCCACA+GGG | + | tig0021965:102102-102121 | Msa1395870:CDS | 50.0% | |
| ! | TTTTACCAGAGAGGACCCTG+TGG | - | tig0021965:102120-102139 | None:intergenic | 50.0% |
| GAGTGTGTGGTTGCAATGCA+GGG | + | tig0021965:102210-102229 | Msa1395870:intron | 50.0% | |
| TGGTTGCAATGCAGGGTTCT+TGG | + | tig0021965:102217-102236 | Msa1395870:intron | 50.0% | |
| CAGCTTCAGCAAATCCCACA+CGG | - | tig0021965:102291-102310 | None:intergenic | 50.0% | |
| GGTAGAATAGTACCCTGCCA+CGG | - | tig0021965:102472-102491 | None:intergenic | 50.0% | |
| !! | GAAAAGCACCAGTGGTCTAG+TGG | - | tig0021965:102493-102512 | None:intergenic | 50.0% |
| CTATAATCAGGGCCGTCTCT+AGG | + | tig0021965:102698-102717 | Msa1395870:three_prime_UTR | 50.0% | |
| TGTTCGAGCCGTCGTCTTTG+CGG | + | tig0021965:98714-98733 | Msa1395870:intron | 55.0% | |
| ATCGGTTGCCGCAAAGACGA+CGG | - | tig0021965:98725-98744 | None:intergenic | 55.0% | |
| TGCATCTTGCACGGGCTTGT+TGG | + | tig0021965:98788-98807 | Msa1395870:intron | 55.0% | |
| CTGTGATCTGCTTGTGGGCT+TGG | + | tig0021965:99413-99432 | Msa1395870:CDS | 55.0% | |
| ! | GTGGGCTTGGTTCCAATCCT+TGG | + | tig0021965:99426-99445 | Msa1395870:CDS | 55.0% |
| ACCCTTCAGCTCCAATGGCA+TGG | - | tig0021965:101201-101220 | None:intergenic | 55.0% | |
| GGAGTGTGTGGTTGCAATGC+AGG | + | tig0021965:102209-102228 | Msa1395870:intron | 55.0% | |
| CAGGGCCGTCTCTAGGTAAT+TGG | + | tig0021965:102705-102724 | Msa1395870:three_prime_UTR | 55.0% | |
| GGCCGTCTCTAGGTAATTGG+AGG | + | tig0021965:102708-102727 | Msa1395870:three_prime_UTR | 55.0% | |
| TACCAGAGAGGACCCTGTGG+AGG | - | tig0021965:102117-102136 | None:intergenic | 60.0% | |
| ACAGACCCGGGTTCGATTCC+CGG | - | tig0021965:102448-102467 | None:intergenic | 60.0% | |
| ! | GGCTTGTCTTCGGACTGGGG+TGG | + | tig0021965:98675-98694 | Msa1395870:intron | 65.0% |
| CAGAGAGGACCCTGTGGAGG+AGG | - | tig0021965:102114-102133 | None:intergenic | 65.0% | |
| CTCCTCCACAGGGTCCTCTC+TGG | + | tig0021965:102112-102131 | Msa1395870:CDS | 65.0% | |
| CACCAGCCGGGAATCGAACC+CGG | + | tig0021965:102439-102458 | Msa1395870:three_prime_UTR | 65.0% | |
| ACCAGCCGGGAATCGAACCC+GGG | + | tig0021965:102440-102459 | Msa1395870:three_prime_UTR | 65.0% | |
| TCGAACCCGGGTCTGTACCG+TGG | + | tig0021965:102452-102471 | Msa1395870:three_prime_UTR | 65.0% | |
| ACCCTGCCACGGTACAGACC+CGG | - | tig0021965:102461-102480 | None:intergenic | 65.0% | |
| ACCCGGGTTCGATTCCCGGC+TGG | - | tig0021965:102444-102463 | None:intergenic | 70.0% | |
| ACCCGGGTCTGTACCGTGGC+AGG | + | tig0021965:102456-102475 | Msa1395870:three_prime_UTR | 70.0% | |
| CCCTGCCACGGTACAGACCC+GGG | - | tig0021965:102460-102479 | None:intergenic | 70.0% | |
| CCCGGGTCTGTACCGTGGCA+GGG | + | tig0021965:102457-102476 | Msa1395870:three_prime_UTR | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0021965 | gene | 98534 | 102752 | 98534 | ID=Msa1395870;Name=Msa1395870 |
| tig0021965 | mRNA | 98534 | 102752 | 98534 | ID=Msa1395870-mRNA-1;Parent=Msa1395870;Name=Msa1395870-mRNA-1;_AED=0.12;_eAED=0.12;_QI=111|1|1|1|0.92|0.85|14|437|497 |
| tig0021965 | exon | 98534 | 98584 | 98534 | ID=Msa1395870-mRNA-1:exon:15050;Parent=Msa1395870-mRNA-1 |
| tig0021965 | exon | 99331 | 99711 | 99331 | ID=Msa1395870-mRNA-1:exon:15051;Parent=Msa1395870-mRNA-1 |
| tig0021965 | exon | 99800 | 99860 | 99800 | ID=Msa1395870-mRNA-1:exon:15052;Parent=Msa1395870-mRNA-1 |
| tig0021965 | exon | 99973 | 100067 | 99973 | ID=Msa1395870-mRNA-1:exon:15053;Parent=Msa1395870-mRNA-1 |
| tig0021965 | exon | 100275 | 100387 | 100275 | ID=Msa1395870-mRNA-1:exon:15054;Parent=Msa1395870-mRNA-1 |
| tig0021965 | exon | 100566 | 100734 | 100566 | ID=Msa1395870-mRNA-1:exon:15055;Parent=Msa1395870-mRNA-1 |
| tig0021965 | exon | 100827 | 100866 | 100827 | ID=Msa1395870-mRNA-1:exon:15056;Parent=Msa1395870-mRNA-1 |
| tig0021965 | exon | 101034 | 101098 | 101034 | ID=Msa1395870-mRNA-1:exon:15057;Parent=Msa1395870-mRNA-1 |
| tig0021965 | exon | 101178 | 101291 | 101178 | ID=Msa1395870-mRNA-1:exon:15058;Parent=Msa1395870-mRNA-1 |
| tig0021965 | exon | 101383 | 101447 | 101383 | ID=Msa1395870-mRNA-1:exon:15059;Parent=Msa1395870-mRNA-1 |
| tig0021965 | exon | 101548 | 101704 | 101548 | ID=Msa1395870-mRNA-1:exon:15060;Parent=Msa1395870-mRNA-1 |
| tig0021965 | exon | 101808 | 101927 | 101808 | ID=Msa1395870-mRNA-1:exon:15061;Parent=Msa1395870-mRNA-1 |
| tig0021965 | exon | 102045 | 102133 | 102045 | ID=Msa1395870-mRNA-1:exon:15062;Parent=Msa1395870-mRNA-1 |
| tig0021965 | exon | 102231 | 102752 | 102231 | ID=Msa1395870-mRNA-1:exon:15063;Parent=Msa1395870-mRNA-1 |
| tig0021965 | five_prime_UTR | 98534 | 98584 | 98534 | ID=Msa1395870-mRNA-1:five_prime_utr;Parent=Msa1395870-mRNA-1 |
| tig0021965 | five_prime_UTR | 99331 | 99390 | 99331 | ID=Msa1395870-mRNA-1:five_prime_utr;Parent=Msa1395870-mRNA-1 |
| tig0021965 | CDS | 99391 | 99711 | 99391 | ID=Msa1395870-mRNA-1:cds;Parent=Msa1395870-mRNA-1 |
| tig0021965 | CDS | 99800 | 99860 | 99800 | ID=Msa1395870-mRNA-1:cds;Parent=Msa1395870-mRNA-1 |
| tig0021965 | CDS | 99973 | 100067 | 99973 | ID=Msa1395870-mRNA-1:cds;Parent=Msa1395870-mRNA-1 |
| tig0021965 | CDS | 100275 | 100387 | 100275 | ID=Msa1395870-mRNA-1:cds;Parent=Msa1395870-mRNA-1 |
| tig0021965 | CDS | 100566 | 100734 | 100566 | ID=Msa1395870-mRNA-1:cds;Parent=Msa1395870-mRNA-1 |
| tig0021965 | CDS | 100827 | 100866 | 100827 | ID=Msa1395870-mRNA-1:cds;Parent=Msa1395870-mRNA-1 |
| tig0021965 | CDS | 101034 | 101098 | 101034 | ID=Msa1395870-mRNA-1:cds;Parent=Msa1395870-mRNA-1 |
| tig0021965 | CDS | 101178 | 101291 | 101178 | ID=Msa1395870-mRNA-1:cds;Parent=Msa1395870-mRNA-1 |
| tig0021965 | CDS | 101383 | 101447 | 101383 | ID=Msa1395870-mRNA-1:cds;Parent=Msa1395870-mRNA-1 |
| tig0021965 | CDS | 101548 | 101704 | 101548 | ID=Msa1395870-mRNA-1:cds;Parent=Msa1395870-mRNA-1 |
| tig0021965 | CDS | 101808 | 101927 | 101808 | ID=Msa1395870-mRNA-1:cds;Parent=Msa1395870-mRNA-1 |
| tig0021965 | CDS | 102045 | 102133 | 102045 | ID=Msa1395870-mRNA-1:cds;Parent=Msa1395870-mRNA-1 |
| tig0021965 | CDS | 102231 | 102315 | 102231 | ID=Msa1395870-mRNA-1:cds;Parent=Msa1395870-mRNA-1 |
| tig0021965 | three_prime_UTR | 102316 | 102752 | 102316 | ID=Msa1395870-mRNA-1:three_prime_utr;Parent=Msa1395870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
