AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1212900

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1212900 MtrunA17_Chr4g0061791 96.741 491 12 3 1 489 1 489 0.0 970
Msa1212900 MtrunA17_Chr5g0420701 47.034 236 110 5 256 489 35 257 9.12e-59 197
Msa1212900 MtrunA17_Chr7g0220371 54.422 147 52 4 253 396 37 171 4.06e-38 142
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1212900 AT5G08130.5 45.972 509 212 18 1 489 1 466 6.47e-104 321
Msa1212900 AT5G08130.7 45.957 507 211 18 1 489 1 462 9.99e-104 320
Msa1212900 AT5G08130.8 45.776 509 214 18 1 489 1 467 1.95e-103 320
Msa1212900 AT5G08130.2 45.759 507 213 18 1 489 1 463 3.14e-103 319
Msa1212900 AT5G08130.4 45.759 507 213 18 1 489 1 463 3.14e-103 319
Msa1212900 AT5G08130.6 45.472 508 213 18 1 489 1 463 1.74e-101 314
Msa1212900 AT5G08130.3 46.966 379 154 13 120 489 2 342 4.51e-82 260
Msa1212900 AT5G08130.1 46.702 379 156 13 120 489 2 343 1.87e-81 259
Msa1212900 AT1G69010.1 41.132 265 118 10 227 487 8 238 1.31e-40 148
Msa1212900 AT5G38860.2 44.828 174 64 5 254 404 21 185 5.91e-34 127
Msa1212900 AT5G38860.1 37.549 253 106 9 254 482 21 245 2.03e-33 128

Find 204 sgRNAs with CRISPR-Local

Find 494 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGCTCTGTGATTGAAGATTT+TGG 0.130907 8_1:-72930038 Msa1212900:five_prime_UTR
TAAGAAGCAAATTGAAATTA+TGG 0.188070 8_1:+72922730 None:intergenic
GAAACCGTAATTCTCTTATT+AGG 0.205454 8_1:+72929820 None:intergenic
TTCTTCCTTGGCACTGGATT+TGG 0.224123 8_1:+72927171 None:intergenic
GAGCATTTGTGGATAGAAAT+TGG 0.227383 8_1:-72922986 Msa1212900:three_prime_UTR
AAGCTCTTGATTTGCGATTA+AGG 0.234916 8_1:-72929907 Msa1212900:five_prime_UTR
TTCATGGTTACCTCCTATAA+TGG 0.237349 8_1:+72926832 None:intergenic
CACCTCTTACCTGGAGGAAT+TGG 0.255162 8_1:-72927079 Msa1212900:CDS
AACTCAACAGAGAAAGTTAA+AGG 0.261850 8_1:-72930554 Msa1212900:five_prime_UTR
TGGGTTGAAGTTAAGAAATT+TGG 0.265205 8_1:+72923305 None:intergenic
CTTCCTCAAGCACGTTCTTA+TGG 0.267366 8_1:-72929616 Msa1212900:CDS
ATAAATATTTCCACAATATA+TGG 0.267977 8_1:-72922592 Msa1212900:three_prime_UTR
AAATGATAAATGTTGTAATT+AGG 0.289965 8_1:-72922464 Msa1212900:three_prime_UTR
TTCTACTGAAGGTTGATAAT+TGG 0.293752 8_1:+72923217 None:intergenic
CACATTGGCATTGGTATGTT+TGG 0.295978 8_1:+72922268 None:intergenic
ATGAATTGTTTGAATGGAAC+AGG 0.302336 8_1:+72922635 None:intergenic
AGAATTTCGAGAAAAGAAAA+TGG 0.303491 8_1:+72922490 None:intergenic
CTCCACCTAAACCTCCGATT+TGG 0.310407 8_1:+72923285 None:intergenic
AAGTTGTGTTGGACATGATA+TGG 0.317695 8_1:-72923023 Msa1212900:three_prime_UTR
AAATTTGGTTGGGAAGAAAT+AGG 0.321463 8_1:+72923320 None:intergenic
ATTACGGTTTCTACTAAATT+CGG 0.322606 8_1:-72929808 Msa1212900:five_prime_UTR
TTGTAATTAGGATGCCAAAT+TGG 0.328639 8_1:-72922452 Msa1212900:three_prime_UTR
CTTAGTTTGTTGGGATCCTT+AGG 0.342893 8_1:-72921854 Msa1212900:three_prime_UTR
TGAATTTACCTCTAACAAAA+AGG 0.343203 8_1:+72924095 None:intergenic
ATCTTCCTTTGATTCTTAGA+AGG 0.344596 8_1:+72922096 None:intergenic
TTCATCTGTGGCTTCTTCCT+TGG 0.345587 8_1:+72927159 None:intergenic
TGTGGCTTCTTCCTTGGCAC+TGG 0.347343 8_1:+72927165 None:intergenic
AACATTGCTGTTTGCTTCAA+AGG 0.352246 8_1:-72923477 Msa1212900:CDS
TCAACCCAAATCGGAGGTTT+AGG 0.354794 8_1:-72923290 Msa1212900:CDS
TCAAGCCAGATTCTACATTA+TGG 0.356652 8_1:+72923408 None:intergenic
GTTGGGGACAAACCCATTAT+AGG 0.362746 8_1:-72926845 Msa1212900:CDS
ATGTAGTGTCTTAGTTTGTT+GGG 0.370568 8_1:-72921863 Msa1212900:three_prime_UTR
TCATGGTTACCTCCTATAAT+GGG 0.372435 8_1:+72926833 None:intergenic
CATGTAGTGTCTTAGTTTGT+TGG 0.372497 8_1:-72921864 Msa1212900:three_prime_UTR
ACACATGCCTTGCAGAGTTC+AGG 0.377988 8_1:-72922355 Msa1212900:three_prime_UTR
GGGGTATTTATTTCCTGTGC+TGG 0.378434 8_1:-72921919 Msa1212900:three_prime_UTR
TTTATCACAGGCTAGCATTT+CGG 0.379312 8_1:-72922326 Msa1212900:three_prime_UTR
CGGATGATCTATTGTCTTCA+TGG 0.382464 8_1:+72923373 None:intergenic
TCAACCTAATAAGAGAATTA+CGG 0.385828 8_1:-72929824 Msa1212900:five_prime_UTR
TTCTGTTTGCAGCCTAAACT+TGG 0.389433 8_1:-72922830 Msa1212900:three_prime_UTR
TCCACCTAAACCTCCGATTT+GGG 0.392555 8_1:+72923286 None:intergenic
GCAGATTCTGCTGCTAAGTT+AGG 0.392981 8_1:-72925631 Msa1212900:intron
CAATCACTCAATTATCATTA+CGG 0.400967 8_1:-72930342 Msa1212900:intron
ACAACTTCAAAATAGTATAA+AGG 0.408201 8_1:+72923039 None:intergenic
CATCCCCTAGTGAGCATTTG+TGG 0.408785 8_1:-72922997 Msa1212900:three_prime_UTR
AATCGCAAATCAAGAGCTTA+AGG 0.410435 8_1:+72929911 None:intergenic
CAAAGTAAATGTGCTATACT+TGG 0.413343 8_1:-72922398 Msa1212900:three_prime_UTR
GTACCTTGAGCAGATGGCCT+TGG 0.414119 8_1:+72929397 None:intergenic
TTCTTAACTTCAACCCAAAT+CGG 0.419263 8_1:-72923299 Msa1212900:CDS
TGTATAATGAATTGTTTGAA+TGG 0.421879 8_1:+72922629 None:intergenic
TGCAGCGAAAGATGAGGTCT+TGG 0.423397 8_1:+72930524 None:intergenic
TTGTTTACTTGACCTTTCCT+TGG 0.424889 8_1:-72921553 Msa1212900:three_prime_UTR
CAATCTCGTGGCGCAAATGG+TGG 0.441241 8_1:-72923515 Msa1212900:CDS
AATCTTGAAAAGTATCTCAT+AGG 0.441412 8_1:+72921575 None:intergenic
GAATATATAAATACATTAGT+AGG 0.441540 8_1:+72922899 None:intergenic
ACCTCTTACCTGGAGGAATT+GGG 0.442515 8_1:-72927078 Msa1212900:CDS
CTGGCTCGTTATTCCAACCT+TGG 0.443215 8_1:+72923943 None:intergenic
AGATGGCCTTGGATCTTGTT+CGG 0.448814 8_1:+72929408 None:intergenic
ATTTCGGTGCAAATTGAACT+TGG 0.449045 8_1:-72922310 Msa1212900:three_prime_UTR
CGCTCTGGCTCTAGAGTCAC+TGG 0.450006 8_1:-72922072 Msa1212900:three_prime_UTR
GGTATCCATAATGTAGAATC+TGG 0.451732 8_1:-72923413 Msa1212900:CDS
TCAGTTGAGCACCTCTTACC+TGG 0.452136 8_1:-72927088 Msa1212900:CDS
ATTACCTCTTTGAACATTCG+AGG 0.454838 8_1:+72925296 None:intergenic
ACAGGAAAGGAGAATAATGT+TGG 0.460228 8_1:-72926863 Msa1212900:CDS
GGTTGGGAAGAAATAGGACT+TGG 0.461704 8_1:+72923326 None:intergenic
TTCAAGCGGTTTCACATTGT+GGG 0.462528 8_1:-72926912 Msa1212900:CDS
ATGAAGCTGGTGTTGCTAAA+GGG 0.464217 8_1:+72927110 None:intergenic
TCTATCCACAAATGCTCACT+AGG 0.466076 8_1:+72922992 None:intergenic
GCTGTAAATTAGTAAACTCT+TGG 0.466747 8_1:-72921728 Msa1212900:three_prime_UTR
GCTATACTTGGACAGGTTGT+TGG 0.468086 8_1:-72922386 Msa1212900:three_prime_UTR
GGATCAACCTAGCATGTTGT+TGG 0.470465 8_1:-72922571 Msa1212900:three_prime_UTR
ACCATCTCCCCAACAACTCA+TGG 0.472821 8_1:-72923437 Msa1212900:CDS
CTTCAAGCGGTTTCACATTG+TGG 0.473695 8_1:-72926913 Msa1212900:CDS
TGAAGTTAAGAAATTTGGTT+GGG 0.473775 8_1:+72923310 None:intergenic
ACTTGATACAATAGGACAAC+TGG 0.473797 8_1:-72925420 Msa1212900:intron
TGATTATCGAACGACCTTTG+TGG 0.474042 8_1:-72930005 Msa1212900:five_prime_UTR
GATTATTTACAGGAGAACTA+AGG 0.474437 8_1:-72924786 Msa1212900:intron
TCCCAATTCCTCCAGGTAAG+AGG 0.482696 8_1:+72927077 None:intergenic
GAGATTAGAAAGGGAAAGAC+AGG 0.483551 8_1:-72926881 Msa1212900:CDS
AGTGAAGTAAGTCCAAGTTT+AGG 0.484101 8_1:+72922818 None:intergenic
GCTAATGGCACCTCCTTCAA+TGG 0.484672 8_1:+72923145 None:intergenic
CTAGTGGCCGCAAGAAATCA+TGG 0.484886 8_1:+72927206 None:intergenic
CTAAATATATATAATTATAG+AGG 0.485547 8_1:-72921795 Msa1212900:three_prime_UTR
CAGGAAAGGAGAATAATGTT+GGG 0.486926 8_1:-72926862 Msa1212900:CDS
TTTGAAGCAAACAGCAATGT+TGG 0.487282 8_1:+72923479 None:intergenic
GGAAGAGTCTGAGATTAGAA+AGG 0.487727 8_1:-72926891 Msa1212900:CDS
CGAGATTGAAAACTTTCTGC+TGG 0.488725 8_1:+72923530 None:intergenic
TTTCAATCTCGTGGCGCAAA+TGG 0.497489 8_1:-72923518 Msa1212900:CDS
GAGAAAGAGCTCACCATTGA+AGG 0.497721 8_1:-72923158 Msa1212900:CDS
TCATCATTTCCATAAAACTC+TGG 0.498591 8_1:+72925388 None:intergenic
ATGAAGGTTCATTCCAAGGT+TGG 0.500331 8_1:-72923956 Msa1212900:CDS
GGAGATGTGGCAGGTGATTG+TGG 0.501550 8_1:-72922965 Msa1212900:three_prime_UTR
TGCTGGATTATTATCCTGCA+TGG 0.504277 8_1:-72921902 Msa1212900:three_prime_UTR
GTTAGGTCAGTGGACATTGA+AGG 0.508165 8_1:-72925614 Msa1212900:CDS
ACTCAACAGAGAAAGTTAAA+GGG 0.511879 8_1:-72930553 Msa1212900:five_prime_UTR
GCCTTGTTTGTTATTCCAGA+CGG 0.512631 8_1:+72923353 None:intergenic
TAAATGTGCTATACTTGGAC+AGG 0.513308 8_1:-72922393 Msa1212900:three_prime_UTR
GATGAAGCTGGTGTTGCTAA+AGG 0.513947 8_1:+72927109 None:intergenic
GCGTGAATAATAATAATCAA+AGG 0.514207 8_1:-72927027 Msa1212900:CDS
CCCATGAGTTGTTGGGGAGA+TGG 0.517548 8_1:+72923436 None:intergenic
CGTGAATAATAATAATCAAA+GGG 0.518006 8_1:-72927026 Msa1212900:intron
GAATTTCGAGAAAAGAAAAT+GGG 0.518677 8_1:+72922491 None:intergenic
ATGTAAACTATAACATAAAG+AGG 0.519364 8_1:+72922688 None:intergenic
TTGAAGTTAAGAAATTTGGT+TGG 0.519525 8_1:+72923309 None:intergenic
GCAGCGAAAGATGAGGTCTT+GGG 0.520455 8_1:+72930525 None:intergenic
GTACACACTTGATATGCTAA+TGG 0.523913 8_1:+72923130 None:intergenic
AAGACAATAGATCATCCGTC+TGG 0.528087 8_1:-72923368 Msa1212900:CDS
AATGCCAATGTGTGTTTCCA+AGG 0.530445 8_1:-72922257 Msa1212900:intron
TTGGAAACACACATTGGCAT+TGG 0.530708 8_1:+72922259 None:intergenic
TTCAGGAGTGGATTTATCAC+AGG 0.531531 8_1:-72922338 Msa1212900:three_prime_UTR
AATCAAAGGAAGATGCGCTC+TGG 0.532036 8_1:-72922087 Msa1212900:three_prime_UTR
TTTATTAGCTATCACAATGA+GGG 0.532937 8_1:+72921605 None:intergenic
TTCTCTGGTACGTAATTCAA+CGG 0.533332 8_1:+72929667 None:intergenic
TTCCACACAGTGATCAAAAG+AGG 0.537014 8_1:-72924128 Msa1212900:CDS
AAGATCCTTCTAAGAATCAA+AGG 0.539351 8_1:-72922101 Msa1212900:three_prime_UTR
CCATCTCCCCAACAACTCAT+GGG 0.540580 8_1:-72923436 Msa1212900:CDS
GAGAAGGTTCATAAGTATGA+AGG 0.541707 8_1:-72923972 Msa1212900:CDS
GAAGAAGCAAAATTAATGAC+AGG 0.542133 8_1:-72924687 Msa1212900:intron
GTGGACATCTATTCAGAGAA+AGG 0.545303 8_1:+72922794 None:intergenic
GATGAAGAGCTAGAAAATGA+AGG 0.546934 8_1:-72925342 Msa1212900:CDS
GCAAACAGCAATGTTGGAGA+TGG 0.547592 8_1:+72923485 None:intergenic
CTAGGTTGATCCATATATTG+TGG 0.548446 8_1:+72922582 None:intergenic
GAAGAGTCTGAGATTAGAAA+GGG 0.549063 8_1:-72926890 Msa1212900:CDS
GATTCTGTGAAATTTCTAGC+AGG 0.550131 8_1:-72930062 Msa1212900:five_prime_UTR
TCTCTTATTAGGTTGAAGAT+CGG 0.551105 8_1:+72929831 None:intergenic
AAGTATGAAGGTTCATTCCA+AGG 0.551145 8_1:-72923960 Msa1212900:CDS
AATCTCGTGGCGCAAATGGT+GGG 0.551190 8_1:-72923514 Msa1212900:CDS
TATACAGTACCTTGAGCAGA+TGG 0.553708 8_1:+72929391 None:intergenic
GGAAATGATGAAATCTGCAC+AGG 0.556382 8_1:-72925376 Msa1212900:CDS
TGCAGCTCACATACTTCAAG+CGG 0.558097 8_1:-72926926 Msa1212900:CDS
CTATCCACAAATGCTCACTA+GGG 0.558631 8_1:+72922993 None:intergenic
CAAAGCAGAGAAATAATGAC+AGG 0.558692 8_1:-72923553 Msa1212900:intron
AGCAACATGAATTGCACAAG+TGG 0.559497 8_1:+72922775 None:intergenic
GAACTAAGGGTGAGAGTGGA+CGG 0.560606 8_1:-72924772 Msa1212900:CDS
TGATTTCTTGCGGCCACTAG+AGG 0.563586 8_1:-72927203 Msa1212900:CDS
AATTGTTAGATGACTGTGGA+TGG 0.565285 8_1:+72922932 None:intergenic
AAATTATCTCTGAATTCTGA+AGG 0.565839 8_1:+72929748 None:intergenic
AGTTTACTAATTTACAGCAA+TGG 0.566532 8_1:+72921733 None:intergenic
ACCCAAATCGGAGGTTTAGG+TGG 0.566780 8_1:-72923287 Msa1212900:CDS
CTATAAGTCCCAATTCCTCC+AGG 0.567759 8_1:+72927070 None:intergenic
AGAAGCCAAATCCAGTGCCA+AGG 0.568313 8_1:-72927176 Msa1212900:CDS
AAAACAGCTTGTATCAGTAT+GGG 0.573845 8_1:+72921769 None:intergenic
TAAATAATGAGCTACGGAAG+AGG 0.574812 8_1:+72921638 None:intergenic
TCAAGACCCATGATTTCTTG+CGG 0.575342 8_1:-72927213 Msa1212900:CDS
ATTATTTACAGGAGAACTAA+GGG 0.578041 8_1:-72924785 Msa1212900:intron
ATAGTCTGAGATTCTACTGA+AGG 0.581921 8_1:+72923206 None:intergenic
AGGCTATAAATAATGAGCTA+CGG 0.582243 8_1:+72921632 None:intergenic
TGCCTTGCAGAGTTCAGGAG+TGG 0.584050 8_1:-72922350 Msa1212900:three_prime_UTR
CACCGATGAGATTTCATCTG+TGG 0.584148 8_1:+72927147 None:intergenic
ACAGTCAATCTCATCCATGC+AGG 0.585678 8_1:+72921888 None:intergenic
GCATTGGTATGTTTGGTCTG+AGG 0.586918 8_1:+72922275 None:intergenic
AATAGAAGCAATCCAAGGAA+AGG 0.589019 8_1:+72921541 None:intergenic
ATCTGCACAGGATTGTGCCC+AGG 0.592606 8_1:-72925364 Msa1212900:CDS
GCACGTTCTTATGGAGCCGA+AGG 0.594158 8_1:-72929607 Msa1212900:intron
GCAGGATAATAATCCAGCAC+AGG 0.595198 8_1:+72921906 None:intergenic
TTGATTATTATTATTCACGC+AGG 0.597539 8_1:+72927030 None:intergenic
TAAGGAAAGAATGAATGTAA+CGG 0.598378 8_1:+72921992 None:intergenic
TTTCTTGCGGCCACTAGAGG+AGG 0.598604 8_1:-72927200 Msa1212900:CDS
ATCCACTCCTGAACTCTGCA+AGG 0.600178 8_1:+72922348 None:intergenic
GCAAGAAATCATGGGTCTTG+AGG 0.600334 8_1:+72927215 None:intergenic
AGGTGCTCAACTGATGAAGC+TGG 0.601853 8_1:+72927097 None:intergenic
AGGAGAACTAAGGGTGAGAG+TGG 0.602089 8_1:-72924776 Msa1212900:CDS
ATTGAATTGTTAGATGACTG+TGG 0.605394 8_1:+72922928 None:intergenic
TTAACTTCAACCCAAATCGG+AGG 0.605590 8_1:-72923296 Msa1212900:CDS
TGAAGCTGGTGTTGCTAAAG+GGG 0.607506 8_1:+72927111 None:intergenic
TTGGCTTCTACCTCCTCTAG+TGG 0.607953 8_1:+72927190 None:intergenic
TGAAGTATGTGAGCTGCAGT+TGG 0.607956 8_1:+72926931 None:intergenic
TATTCACGCAGGAATTAATG+TGG 0.608444 8_1:+72927041 None:intergenic
TAGAAAGGGAAAGACAGGAA+AGG 0.608538 8_1:-72926876 Msa1212900:CDS
GCTCCATAAGAACGTGCTTG+AGG 0.609314 8_1:+72929613 None:intergenic
TAGTGGCCGCAAGAAATCAT+GGG 0.609935 8_1:+72927207 None:intergenic
GATCCAAGGCCATCTGCTCA+AGG 0.611922 8_1:-72929400 Msa1212900:intron
GTGGATAGAAATTGGAGATG+TGG 0.617637 8_1:-72922978 Msa1212900:three_prime_UTR
ATAGAAATTGGAGATGTGGC+AGG 0.617759 8_1:-72922974 Msa1212900:three_prime_UTR
ATATCAAGTGTGTACTCACA+AGG 0.619435 8_1:-72923122 Msa1212900:CDS
TGAATTGTTTGAATGGAACA+GGG 0.619907 8_1:+72922636 None:intergenic
AAAGAGCTCACCATTGAAGG+AGG 0.629369 8_1:-72923155 Msa1212900:CDS
CAACTGCCGAACAAGATCCA+AGG 0.629883 8_1:-72929414 Msa1212900:CDS
TATACCTTGGAAACACACAT+TGG 0.634078 8_1:+72922253 None:intergenic
CATCTCCCCAACAACTCATG+GGG 0.638824 8_1:-72923435 Msa1212900:CDS
CACAGATGAAATCTCATCGG+TGG 0.642838 8_1:-72927146 Msa1212900:CDS
AGCCACAGATGAAATCTCAT+CGG 0.643022 8_1:-72927149 Msa1212900:CDS
TCCACACAGTGATCAAAAGA+GGG 0.643944 8_1:-72924127 Msa1212900:CDS
GCTATCACAATGAGGGTGTG+AGG 0.644440 8_1:+72921612 None:intergenic
ACAGCTTGTATCAGTATGGG+AGG 0.645446 8_1:+72921772 None:intergenic
GAATCCTCGAATGTTCAAAG+AGG 0.645829 8_1:-72925300 Msa1212900:intron
GGGGACAAACCCATTATAGG+AGG 0.647556 8_1:-72926842 Msa1212900:intron
ATCTGGCTTGAGCACAACAA+CGG 0.650337 8_1:-72923396 Msa1212900:CDS
TTAGCAATTGACTTCCACAA+AGG 0.655989 8_1:+72929991 None:intergenic
GAATTAATAGAAGCAATCCA+AGG 0.657987 8_1:+72921536 None:intergenic
GAGCACTGCAGCGAAAGATG+AGG 0.658597 8_1:+72930518 None:intergenic
CGAAAGATGAGGTCTTGGGT+CGG 0.660416 8_1:+72930529 None:intergenic
TATATATTCACCCAGCCATG+AGG 0.661374 8_1:-72922885 Msa1212900:three_prime_UTR
CTGCTGCTAAGTTAGGTCAG+TGG 0.667387 8_1:-72925624 Msa1212900:CDS
AGGAAAGGAGAATAATGTTG+GGG 0.670249 8_1:-72926861 Msa1212900:CDS
TCTGTGCGGAAACAGGAACA+GGG 0.674611 8_1:-72929480 Msa1212900:intron
TATCCACAAATGCTCACTAG+GGG 0.675975 8_1:+72922994 None:intergenic
TCCGTCTGGAATAACAAACA+AGG 0.684989 8_1:-72923354 Msa1212900:CDS
TATCAAGTGTGTACTCACAA+GGG 0.699426 8_1:-72923121 Msa1212900:CDS
TGTGCATCAAGCAACTAGTG+CGG 0.714634 8_1:-72926972 Msa1212900:CDS
GTTGAGCACCTCTTACCTGG+AGG 0.717651 8_1:-72927085 Msa1212900:CDS
ATCTCCCCAACAACTCATGG+GGG 0.722606 8_1:-72923434 Msa1212900:CDS
GAAGCTGGTGTTGCTAAAGG+GGG 0.738031 8_1:+72927112 None:intergenic
GTGCGGAAACAGGAACAGGG+AGG 0.762318 8_1:-72929477 Msa1212900:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATGTATTATTAATTAATTTG+AGG + chr8_1:72924216-72924235 None:intergenic 10.0%
!!! TAAAATAAAAAACTATTTTC+AGG + chr8_1:72924624-72924643 None:intergenic 10.0%
!!! GATAATAAATAATTTTCATT+TGG + chr8_1:72925688-72925707 None:intergenic 10.0%
!!! GGATAATTTTTTAAAATAAT+GGG + chr8_1:72926101-72926120 None:intergenic 10.0%
!!! TGGATAATTTTTTAAAATAA+TGG + chr8_1:72926102-72926121 None:intergenic 10.0%
!! AAAATAAGATAAATAATTAC+AGG + chr8_1:72926131-72926150 None:intergenic 10.0%
!!! TATTTTTAACATTTTTTACT+CGG - chr8_1:72926653-72926672 Msa1212900:intron 10.0%
!! AAAGGAAAAAAAAAAAAAAA+AGG - chr8_1:72927739-72927758 Msa1212900:intron 10.0%
!!! TAATTTTTATCAATTATTTG+GGG - chr8_1:72930187-72930206 Msa1212900:intron 10.0%
!!! TTTTAAAATTAATTTTTGGA+AGG - chr8_1:72930215-72930234 Msa1212900:intron 10.0%
!!! TTTAAAATTAATTTTTGGAA+GGG - chr8_1:72930216-72930235 Msa1212900:intron 10.0%
!! CTAAATATATATAATTATAG+AGG - chr8_1:72930360-72930379 Msa1212900:five_prime_UTR 10.0%
!!! TATTTTTTTAACATTGATTT+TGG - chr8_1:72930466-72930485 Msa1212900:five_prime_UTR 10.0%
!! TGATTTGAATTAATATTGTT+TGG - chr8_1:72922632-72922651 Msa1212900:three_prime_UTR 15.0%
!! TTATTTACAGTTGAATTATT+TGG + chr8_1:72922946-72922965 None:intergenic 15.0%
!! TTAATTAACAAAATTTCCTA+TGG - chr8_1:72923074-72923093 Msa1212900:three_prime_UTR 15.0%
!! GAAAAAAATTAAAGTTGTAT+TGG + chr8_1:72923411-72923430 None:intergenic 15.0%
!! AAATAGAATGAAATAATCAT+TGG + chr8_1:72923527-72923546 None:intergenic 15.0%
!! CAAAATCTTTATATTCTTTA+AGG + chr8_1:72923922-72923941 None:intergenic 15.0%
!!! CTTAAAGAATATAAAGATTT+TGG - chr8_1:72923920-72923939 Msa1212900:intron 15.0%
!! TATTACTATATTCTTTCATA+TGG - chr8_1:72923977-72923996 Msa1212900:CDS 15.0%
!! TTAAAACAATTGAAAGTTAA+TGG + chr8_1:72924004-72924023 None:intergenic 15.0%
!! TAGCTATTATTAGTTAATAA+TGG + chr8_1:72924149-72924168 None:intergenic 15.0%
!!! TTTTCATTTTTCGTTAAATA+CGG + chr8_1:72924767-72924786 None:intergenic 15.0%
!!! TTTTGTTTTCAAAATTCTTT+CGG - chr8_1:72924842-72924861 Msa1212900:intron 15.0%
!! TATTTAAATGGAGAATAATA+AGG - chr8_1:72925413-72925432 Msa1212900:intron 15.0%
!! TTTACTTTAAATATACTTCT+AGG + chr8_1:72925863-72925882 None:intergenic 15.0%
!! ATTGAAATAAAACTTAAAAG+AGG + chr8_1:72926927-72926946 None:intergenic 15.0%
!!! ATTATTTACTGATTATTTAC+AGG - chr8_1:72927359-72927378 Msa1212900:intron 15.0%
!! TTTATTAGATTTATGGTTTA+TGG - chr8_1:72927816-72927835 Msa1212900:intron 15.0%
!! TTATTAGATTTATGGTTTAT+GGG - chr8_1:72927817-72927836 Msa1212900:intron 15.0%
!! GTTTAATCTAAATTATTTGT+AGG - chr8_1:72928134-72928153 Msa1212900:intron 15.0%
!! TCATGTTTATAAAGAAATAA+AGG + chr8_1:72928415-72928434 None:intergenic 15.0%
!! AATTTAAATCCATTAACAAT+AGG + chr8_1:72928539-72928558 None:intergenic 15.0%
!! GAATATATAAATACATTAGT+AGG + chr8_1:72929259-72929278 None:intergenic 15.0%
!! ATAAATATTTCCACAATATA+TGG - chr8_1:72929563-72929582 Msa1212900:intron 15.0%
!! AAATGATAAATGTTGTAATT+AGG - chr8_1:72929691-72929710 Msa1212900:five_prime_UTR 15.0%
!! TATAAAAAGACTTTACAAAA+GGG + chr8_1:72929941-72929960 None:intergenic 15.0%
!! TTATAAAAAGACTTTACAAA+AGG + chr8_1:72929942-72929961 None:intergenic 15.0%
!! ACAAATTAGATAATAATACA+TGG + chr8_1:72930010-72930029 None:intergenic 15.0%
!!! TTAAAATTAATTTTTGGAAG+GGG - chr8_1:72930217-72930236 Msa1212900:intron 15.0%
!!! TTCAATTTTTTGTTTCTTAG+TGG - chr8_1:72921851-72921870 Msa1212900:three_prime_UTR 20.0%
!! AATAAAATCATAACTACCTT+CGG + chr8_1:72922567-72922586 None:intergenic 20.0%
!! TATTGTTATGCAAAATGATT+CGG - chr8_1:72922808-72922827 Msa1212900:three_prime_UTR 20.0%
!! TATAAGAGAATGAAAATGAA+AGG - chr8_1:72923599-72923618 Msa1212900:intron 20.0%
!!! GAATTCAAATTTTCTTTGTA+AGG + chr8_1:72923741-72923760 None:intergenic 20.0%
!! AATTTCTTTCAATTTAACCA+AGG + chr8_1:72923767-72923786 None:intergenic 20.0%
!!! ATATATATTGTTTTCACTCA+TGG + chr8_1:72923877-72923896 None:intergenic 20.0%
!!! AGATTTTGGTGTTTTAATTT+TGG - chr8_1:72923934-72923953 Msa1212900:CDS 20.0%
!!! GATTTTGGTGTTTTAATTTT+GGG - chr8_1:72923935-72923954 Msa1212900:CDS 20.0%
!! ATATAGTAATACCATTATAC+TGG + chr8_1:72923968-72923987 None:intergenic 20.0%
!!! TAGTTAATAATGGAAAAATG+AGG + chr8_1:72924139-72924158 None:intergenic 20.0%
!!! AGTTTTCAAAACTATTTCTT+AGG + chr8_1:72924664-72924683 None:intergenic 20.0%
!!! TAAGAAATAGTTTTGAAAAC+TGG - chr8_1:72924663-72924682 Msa1212900:intron 20.0%
!! CGTGAATAATAATAATCAAA+GGG - chr8_1:72925129-72925148 Msa1212900:intron 20.0%
!! CATCTTCAAAAATTATTTCA+TGG + chr8_1:72925342-72925361 None:intergenic 20.0%
!!! AATTAAAGTGTTAGTATCTT+GGG + chr8_1:72925553-72925572 None:intergenic 20.0%
!!! AAATTAAAGTGTTAGTATCT+TGG + chr8_1:72925554-72925573 None:intergenic 20.0%
!! AATAGAGATAGAAAATGTTT+AGG - chr8_1:72925773-72925792 Msa1212900:intron 20.0%
!! ATAGAGATAGAAAATGTTTA+GGG - chr8_1:72925774-72925793 Msa1212900:intron 20.0%
!! ATGAAAATAACTGATTGAAA+GGG - chr8_1:72926042-72926061 Msa1212900:intron 20.0%
!! TAAATAATTACAGGTATGAT+TGG + chr8_1:72926122-72926141 None:intergenic 20.0%
!! CAAACATAAACAACTAAAAT+TGG + chr8_1:72926172-72926191 None:intergenic 20.0%
!!! ATTTGTTCCAATTATTTTCT+CGG - chr8_1:72926316-72926335 Msa1212900:intron 20.0%
!! AATTACATAACCATCTTAAA+AGG + chr8_1:72926687-72926706 None:intergenic 20.0%
!! AATTTGGCAACTATAATTAA+AGG + chr8_1:72927134-72927153 None:intergenic 20.0%
!!! AGTTTCATTCTTTTTTAGAA+AGG - chr8_1:72927721-72927740 Msa1212900:intron 20.0%
!! AATATTTGAATCAAACATGT+AGG - chr8_1:72927982-72928001 Msa1212900:intron 20.0%
!! ACAACTTCAAAATAGTATAA+AGG + chr8_1:72929119-72929138 None:intergenic 20.0%
!! TAAGAAGCAAATTGAAATTA+TGG + chr8_1:72929428-72929447 None:intergenic 20.0%
!! ATGTAAACTATAACATAAAG+AGG + chr8_1:72929470-72929489 None:intergenic 20.0%
!! TGTATAATGAATTGTTTGAA+TGG + chr8_1:72929529-72929548 None:intergenic 20.0%
!!! ATGATGCATATTATTTTGTT+GGG + chr8_1:72930332-72930351 None:intergenic 20.0%
!!! AATGATGCATATTATTTTGT+TGG + chr8_1:72930333-72930352 None:intergenic 20.0%
!!! TTTTTTAACATTGATTTTGG+TGG - chr8_1:72930469-72930488 Msa1212900:five_prime_UTR 20.0%
! CAATCACTCAATTATCATTA+CGG - chr8_1:72921813-72921832 Msa1212900:three_prime_UTR 25.0%
! AAACTCGAATTAGCATAATT+CGG + chr8_1:72921979-72921998 None:intergenic 25.0%
! TCAACCTAATAAGAGAATTA+CGG - chr8_1:72922331-72922350 Msa1212900:three_prime_UTR 25.0%
! ATTACGGTTTCTACTAAATT+CGG - chr8_1:72922347-72922366 Msa1212900:three_prime_UTR 25.0%
! AAATTATCTCTGAATTCTGA+AGG + chr8_1:72922410-72922429 None:intergenic 25.0%
!!! TTCAACGGAATTTTGAAATT+CGG + chr8_1:72922476-72922495 None:intergenic 25.0%
!!! AATTGAGATTCAAGTTTTGA+TGG - chr8_1:72922514-72922533 Msa1212900:three_prime_UTR 25.0%
! GTAGTATAAATTCTACATCA+CGG - chr8_1:72922909-72922928 Msa1212900:three_prime_UTR 25.0%
! ATTAACAAAATTTCCTATGG+TGG - chr8_1:72923077-72923096 Msa1212900:three_prime_UTR 25.0%
! GAAAATTTGAATTCAAACCT+TGG - chr8_1:72923747-72923766 Msa1212900:intron 25.0%
!!! TTTACCACTTTTTGCATTTT+AGG - chr8_1:72923847-72923866 Msa1212900:intron 25.0%
! ATTTCCTAAAATGCAAAAAG+TGG + chr8_1:72923854-72923873 None:intergenic 25.0%
! AAATTCTTTCGGTTAATTGA+AGG - chr8_1:72924853-72924872 Msa1212900:intron 25.0%
! TTGATTATTATTATTCACGC+AGG + chr8_1:72925128-72925147 None:intergenic 25.0%
! GCGTGAATAATAATAATCAA+AGG - chr8_1:72925128-72925147 Msa1212900:intron 25.0%
!!! AGCAAGAAGCATTATTTAAA+TGG - chr8_1:72925401-72925420 Msa1212900:CDS 25.0%
!! ATGTTTAAAGCATAAAGTGT+AGG + chr8_1:72925461-72925480 None:intergenic 25.0%
!! ATTAAAGTGTTAGTATCTTG+GGG + chr8_1:72925552-72925571 None:intergenic 25.0%
! ACTAATCCTTGAAAAACATA+AGG - chr8_1:72925646-72925665 Msa1212900:intron 25.0%
! ATGAAATCATAAGAAAATGC+AGG + chr8_1:72925809-72925828 None:intergenic 25.0%
! CATGAAAATAACTGATTGAA+AGG - chr8_1:72926041-72926060 Msa1212900:intron 25.0%
! ATAAACAACTAAAATTGGCA+AGG + chr8_1:72926167-72926186 None:intergenic 25.0%
!! CGTTAATTAGTTAGATTTTG+AGG - chr8_1:72926409-72926428 Msa1212900:intron 25.0%
!!! ATCATTTTAACTTTGTGATG+AGG - chr8_1:72927081-72927100 Msa1212900:CDS 25.0%
!!! TCATTTTAACTTTGTGATGA+GGG - chr8_1:72927082-72927101 Msa1212900:CDS 25.0%
!!! GTGGTTTTAATATTATGTCT+CGG - chr8_1:72927235-72927254 Msa1212900:intron 25.0%
! ATTATTTACAGGAGAACTAA+GGG - chr8_1:72927370-72927389 Msa1212900:intron 25.0%
! AATTCTATCACCATATTAGT+AGG + chr8_1:72927503-72927522 None:intergenic 25.0%
! GCAGTTCATAATTAAGAAAA+GGG + chr8_1:72927582-72927601 None:intergenic 25.0%
! TGCAGTTCATAATTAAGAAA+AGG + chr8_1:72927583-72927602 None:intergenic 25.0%
!!! TTTCCTAAAAGCCATTTTTA+GGG + chr8_1:72927769-72927788 None:intergenic 25.0%
!!! TTTTCCTAAAAGCCATTTTT+AGG + chr8_1:72927770-72927789 None:intergenic 25.0%
! TAACAATGATTCCAATTAAG+TGG - chr8_1:72927791-72927810 Msa1212900:intron 25.0%
! TCTAATAAAGTCCACTTAAT+TGG + chr8_1:72927805-72927824 None:intergenic 25.0%
!! AGTGGACTTTATTAGATTTA+TGG - chr8_1:72927809-72927828 Msa1212900:intron 25.0%
! CAAATAAAATCAGGTAATGA+TGG + chr8_1:72927944-72927963 None:intergenic 25.0%
! GATTATGAGCAAATAAAATC+AGG + chr8_1:72927953-72927972 None:intergenic 25.0%
! TGAATTTACCTCTAACAAAA+AGG + chr8_1:72928063-72928082 None:intergenic 25.0%
! TTGTTAGAGGTAAATTCATA+CGG - chr8_1:72928065-72928084 Msa1212900:intron 25.0%
! CAAAATAATAGCTTCATTGA+TGG - chr8_1:72928299-72928318 Msa1212900:intron 25.0%
! TTCTTTATAAACATGATCAG+AGG - chr8_1:72928419-72928438 Msa1212900:intron 25.0%
! TCTTTATAAACATGATCAGA+GGG - chr8_1:72928420-72928439 Msa1212900:intron 25.0%
!! GAAAAATGTGAATCAGTTTT+TGG + chr8_1:72928578-72928597 None:intergenic 25.0%
! TGAAGTTAAGAAATTTGGTT+GGG + chr8_1:72928848-72928867 None:intergenic 25.0%
! TTGAAGTTAAGAAATTTGGT+TGG + chr8_1:72928849-72928868 None:intergenic 25.0%
!!! ATACTATTTTGAAGTTGTGT+TGG - chr8_1:72929121-72929140 Msa1212900:intron 25.0%
!!! AAACAGTTTTTTAATCCTCA+TGG + chr8_1:72929288-72929307 None:intergenic 25.0%
! GAATTTCGAGAAAAGAAAAT+GGG + chr8_1:72929667-72929686 None:intergenic 25.0%
! AGAATTTCGAGAAAAGAAAA+TGG + chr8_1:72929668-72929687 None:intergenic 25.0%
! AATGCTAACAAAAACCAATT+TGG + chr8_1:72929720-72929739 None:intergenic 25.0%
! TAATACATGGTTTCATAATG+TGG + chr8_1:72929997-72930016 None:intergenic 25.0%
! TAAGGAAAGAATGAATGTAA+CGG + chr8_1:72930166-72930185 None:intergenic 25.0%
!!! TGATGCATATTATTTTGTTG+GGG + chr8_1:72930331-72930350 None:intergenic 25.0%
! AGTTTACTAATTTACAGCAA+TGG + chr8_1:72930425-72930444 None:intergenic 25.0%
! TTTATTAGCTATCACAATGA+GGG + chr8_1:72930553-72930572 None:intergenic 25.0%
!! TTTTATTAGCTATCACAATG+AGG + chr8_1:72930554-72930573 None:intergenic 25.0%
!!! AATCTTGAAAAGTATCTCAT+AGG + chr8_1:72930583-72930602 None:intergenic 25.0%
AACTCAACAGAGAAAGTTAA+AGG - chr8_1:72921601-72921620 Msa1212900:three_prime_UTR 30.0%
ACTCAACAGAGAAAGTTAAA+GGG - chr8_1:72921602-72921621 Msa1212900:three_prime_UTR 30.0%
AGTGATTATAAGAAAAAGCG+CGG - chr8_1:72921695-72921714 Msa1212900:three_prime_UTR 30.0%
!! TCTCTTATTAGGTTGAAGAT+CGG + chr8_1:72922327-72922346 None:intergenic 30.0%
GAAACCGTAATTCTCTTATT+AGG + chr8_1:72922338-72922357 None:intergenic 30.0%
! TGAATCTCAATTTTCTTCTC+TGG + chr8_1:72922506-72922525 None:intergenic 30.0%
!!! TTTTCTGAAACTTTTCTGTG+CGG - chr8_1:72922661-72922680 Msa1212900:three_prime_UTR 30.0%
TGTATTTAATCACAGGATCT+GGG - chr8_1:72923003-72923022 Msa1212900:three_prime_UTR 30.0%
CAGTCCATAAATAAAAAGCA+TGG + chr8_1:72923029-72923048 None:intergenic 30.0%
CCATTTGATGTTAAATCCTT+CGG + chr8_1:72923106-72923125 None:intergenic 30.0%
AACTACAAGTCCATCAAAAT+GGG + chr8_1:72923195-72923214 None:intergenic 30.0%
! TTGATTTGACATTTCACATC+AGG - chr8_1:72923213-72923232 Msa1212900:CDS 30.0%
TAAGGAAATCTCACAGTATA+GGG + chr8_1:72923904-72923923 None:intergenic 30.0%
TTAAGGAAATCTCACAGTAT+AGG + chr8_1:72923905-72923924 None:intergenic 30.0%
AATGAGGAGAATGAAAAAAG+TGG + chr8_1:72924123-72924142 None:intergenic 30.0%
GTTATAACAAACATGAGTTG+AGG - chr8_1:72924273-72924292 Msa1212900:intron 30.0%
TGACATGTAAGTGCATTAAA+TGG + chr8_1:72924716-72924735 None:intergenic 30.0%
TAATAATCAAAGGGTTCCAA+AGG - chr8_1:72925138-72925157 Msa1212900:intron 30.0%
GATTTGTGCTCAAATTCTAT+GGG + chr8_1:72925484-72925503 None:intergenic 30.0%
! TGATTTGTGCTCAAATTCTA+TGG + chr8_1:72925485-72925504 None:intergenic 30.0%
!! TCATTTGGTTTGCTATTATC+CGG + chr8_1:72925673-72925692 None:intergenic 30.0%
ATGATTTCATATAACGTGCA+TGG - chr8_1:72925819-72925838 Msa1212900:intron 30.0%
!!! ACGGTTTTTTGGGTATTATT+AGG + chr8_1:72925933-72925952 None:intergenic 30.0%
!!! AGTAAAAGCTACGGTTTTTT+GGG + chr8_1:72925943-72925962 None:intergenic 30.0%
!!! TAGTAAAAGCTACGGTTTTT+TGG + chr8_1:72925944-72925963 None:intergenic 30.0%
!!! TTAGTTTTTTCTTTCGCCAA+TGG - chr8_1:72925997-72926016 Msa1212900:intron 30.0%
CAATTGTATAGTATTTGCGA+CGG - chr8_1:72926471-72926490 Msa1212900:intron 30.0%
TTTCACAGCACTTTATTATG+TGG - chr8_1:72926502-72926521 Msa1212900:intron 30.0%
! TCGTTTTCTAACAATCATCA+TGG - chr8_1:72926578-72926597 Msa1212900:intron 30.0%
!! GGAATAGTTTCCTTTTAAGA+TGG - chr8_1:72926674-72926693 Msa1212900:intron 30.0%
! CTTTTTGCACTTGATACAAT+AGG - chr8_1:72926727-72926746 Msa1212900:intron 30.0%
TCATCATTTCCATAAAACTC+TGG + chr8_1:72926770-72926789 None:intergenic 30.0%
TAATATCTCCTTGTTGAGAA+AGG - chr8_1:72926885-72926904 Msa1212900:CDS 30.0%
TTAGTCAGATCAATGAAAAG+GGG + chr8_1:72927201-72927220 None:intergenic 30.0%
GTTAGTCAGATCAATGAAAA+GGG + chr8_1:72927202-72927221 None:intergenic 30.0%
AGTTAGTCAGATCAATGAAA+AGG + chr8_1:72927203-72927222 None:intergenic 30.0%
! ACTAACTAGTGTTTTGTAAG+TGG - chr8_1:72927216-72927235 Msa1212900:CDS 30.0%
TTTGAGTATATAACTCGTTG+TGG + chr8_1:72927277-72927296 None:intergenic 30.0%
ACAACGAGTTATATACTCAA+AGG - chr8_1:72927276-72927295 Msa1212900:intron 30.0%
CAACGAGTTATATACTCAAA+GGG - chr8_1:72927277-72927296 Msa1212900:intron 30.0%
! TTGTTCGAAAAGATTTTACG+AGG - chr8_1:72927323-72927342 Msa1212900:intron 30.0%
GATTATTTACAGGAGAACTA+AGG - chr8_1:72927369-72927388 Msa1212900:intron 30.0%
GAAGAAGCAAAATTAATGAC+AGG - chr8_1:72927468-72927487 Msa1212900:intron 30.0%
!! GTTAGTCTTACCTACTAATA+TGG - chr8_1:72927490-72927509 Msa1212900:intron 30.0%
! AAAAAGGTGTACCCTAAAAA+TGG - chr8_1:72927755-72927774 Msa1212900:intron 30.0%
!!! CATTCACTTTTTACAAGAGA+AGG - chr8_1:72928167-72928186 Msa1212900:intron 30.0%
AATCTTTCACAGCTTAAGAT+AGG + chr8_1:72928271-72928290 None:intergenic 30.0%
TTTCTCATAAAATGATCTGG+AGG + chr8_1:72928342-72928361 None:intergenic 30.0%
ACGTTTCTCATAAAATGATC+TGG + chr8_1:72928345-72928364 None:intergenic 30.0%
CAATCAAAACTATTAGGTCT+AGG + chr8_1:72928386-72928405 None:intergenic 30.0%
!!! ACCTAATAGTTTTGATTGTC+TGG - chr8_1:72928388-72928407 Msa1212900:intron 30.0%
ACCAGACAATCAAAACTATT+AGG + chr8_1:72928392-72928411 None:intergenic 30.0%
ATCACATAGCCTATTGTTAA+TGG - chr8_1:72928527-72928546 Msa1212900:intron 30.0%
!! AATGTGAATCAGTTTTTGGA+TGG + chr8_1:72928574-72928593 None:intergenic 30.0%
AAATTTGGTTGGGAAGAAAT+AGG + chr8_1:72928838-72928857 None:intergenic 30.0%
! TGGGTTGAAGTTAAGAAATT+TGG + chr8_1:72928853-72928872 None:intergenic 30.0%
TTCTTAACTTCAACCCAAAT+CGG - chr8_1:72928856-72928875 Msa1212900:intron 30.0%
!! TTCTACTGAAGGTTGATAAT+TGG + chr8_1:72928941-72928960 None:intergenic 30.0%
ATTGAATTGTTAGATGACTG+TGG + chr8_1:72929230-72929249 None:intergenic 30.0%
TGAATTGTTTGAATGGAACA+GGG + chr8_1:72929522-72929541 None:intergenic 30.0%
ATGAATTGTTTGAATGGAAC+AGG + chr8_1:72929523-72929542 None:intergenic 30.0%
TTGTAATTAGGATGCCAAAT+TGG - chr8_1:72929703-72929722 Msa1212900:five_prime_UTR 30.0%
CAAAGTAAATGTGCTATACT+TGG - chr8_1:72929757-72929776 Msa1212900:five_prime_UTR 30.0%
CAATTTGAGCAAATATACCT+TGG + chr8_1:72929918-72929937 None:intergenic 30.0%
! AAGATCCTTCTAAGAATCAA+AGG - chr8_1:72930054-72930073 Msa1212900:five_prime_UTR 30.0%
ATCTTCCTTTGATTCTTAGA+AGG + chr8_1:72930062-72930081 None:intergenic 30.0%
!! ATGTAGTGTCTTAGTTTGTT+GGG - chr8_1:72930292-72930311 Msa1212900:intron 30.0%
!! ATGCATATTATTTTGTTGGG+GGG + chr8_1:72930329-72930348 None:intergenic 30.0%
!! GATGCATATTATTTTGTTGG+GGG + chr8_1:72930330-72930349 None:intergenic 30.0%
AAAACAGCTTGTATCAGTAT+GGG + chr8_1:72930389-72930408 None:intergenic 30.0%
AAAAACAGCTTGTATCAGTA+TGG + chr8_1:72930390-72930409 None:intergenic 30.0%
GCTGTAAATTAGTAAACTCT+TGG - chr8_1:72930427-72930446 Msa1212900:five_prime_UTR 30.0%
AGGCTATAAATAATGAGCTA+CGG + chr8_1:72930526-72930545 None:intergenic 30.0%
GAATTAATAGAAGCAATCCA+AGG + chr8_1:72930622-72930641 None:intergenic 30.0%
!! GATTCTGTGAAATTTCTAGC+AGG - chr8_1:72922093-72922112 Msa1212900:three_prime_UTR 35.0%
! TTAGCAATTGACTTCCACAA+AGG + chr8_1:72922167-72922186 None:intergenic 35.0%
AATCGCAAATCAAGAGCTTA+AGG + chr8_1:72922247-72922266 None:intergenic 35.0%
!! AAGCTCTTGATTTGCGATTA+AGG - chr8_1:72922248-72922267 Msa1212900:intron 35.0%
TTCTCTGGTACGTAATTCAA+CGG + chr8_1:72922491-72922510 None:intergenic 35.0%
CAGATCCTGTGATTAAATAC+AGG + chr8_1:72923004-72923023 None:intergenic 35.0%
CTGTATTTAATCACAGGATC+TGG - chr8_1:72923002-72923021 Msa1212900:three_prime_UTR 35.0%
!! TGGGCCATGCTTTTTATTTA+TGG - chr8_1:72923022-72923041 Msa1212900:three_prime_UTR 35.0%
CCGAAGGATTTAACATCAAA+TGG - chr8_1:72923103-72923122 Msa1212900:exon 35.0%
CAACTACAAGTCCATCAAAA+TGG + chr8_1:72923196-72923215 None:intergenic 35.0%
GAGGGAGTAAAATCTTAATC+TGG + chr8_1:72923323-72923342 None:intergenic 35.0%
!! AAGCGACACTCATTTTGAAA+CGG + chr8_1:72923570-72923589 None:intergenic 35.0%
AAAGTTGAAGAGGGTAAAGT+TGG + chr8_1:72923436-72923455 None:intergenic 35.0%
TGTGAGAGAAAAGTTGAAGA+GGG + chr8_1:72923445-72923464 None:intergenic 35.0%
!! TTCAAAATGAGTGTCGCTTT+AGG + chr8_1:72923346-72923365 None:intergenic 35.0%
!! AAGCGACACTCATTTTGAAA+CGG - chr8_1:72923570-72923589 Msa1212900:intron 35.0%
TGGGCTAAAAACCAGTATAA+TGG - chr8_1:72923954-72923973 Msa1212900:CDS 35.0%
TATTCACGCAGGAATTAATG+TGG + chr8_1:72925117-72925136 None:intergenic 35.0%
! GAAGAGTCTGAGATTAGAAA+GGG - chr8_1:72925265-72925284 Msa1212900:intron 35.0%
ACAGGAAAGGAGAATAATGT+TGG - chr8_1:72925292-72925311 Msa1212900:intron 35.0%
CAGGAAAGGAGAATAATGTT+GGG - chr8_1:72925293-72925312 Msa1212900:intron 35.0%
AGGAAAGGAGAATAATGTTG+GGG - chr8_1:72925294-72925313 Msa1212900:intron 35.0%
TCATGGTTACCTCCTATAAT+GGG + chr8_1:72925325-72925344 None:intergenic 35.0%
TTCATGGTTACCTCCTATAA+TGG + chr8_1:72925326-72925345 None:intergenic 35.0%
AAAGTGTAGGCTGTTGTAAT+GGG + chr8_1:72925448-72925467 None:intergenic 35.0%
TAAAGTGTAGGCTGTTGTAA+TGG + chr8_1:72925449-72925468 None:intergenic 35.0%
TCCTTGAAAAACATAAGGAC+CGG - chr8_1:72925651-72925670 Msa1212900:intron 35.0%
! AAAACCGTAGCTTTTACTAC+TGG - chr8_1:72925945-72925964 Msa1212900:intron 35.0%
CATTCCAGTAGTAAAAGCTA+CGG + chr8_1:72925952-72925971 None:intergenic 35.0%
TTTCATGAATCGATTATGCG+AGG + chr8_1:72926028-72926047 None:intergenic 35.0%
AGAACGTCCGAGAAAATAAT+TGG + chr8_1:72926326-72926345 None:intergenic 35.0%
ACACATGAATGACACTAGAT+AGG - chr8_1:72926350-72926369 Msa1212900:intron 35.0%
CACATGAATGACACTAGATA+GGG - chr8_1:72926351-72926370 Msa1212900:intron 35.0%
ACTTGATACAATAGGACAAC+TGG - chr8_1:72926735-72926754 Msa1212900:intron 35.0%
! ACAGAAGAACCAGAGTTTTA+TGG - chr8_1:72926758-72926777 Msa1212900:intron 35.0%
!!! ATTTTCTAGCTCTTCATCCT+GGG + chr8_1:72926811-72926830 None:intergenic 35.0%
GATGAAGAGCTAGAAAATGA+AGG - chr8_1:72926813-72926832 Msa1212900:intron 35.0%
ATTACCTCTTTGAACATTCG+AGG + chr8_1:72926862-72926881 None:intergenic 35.0%
!!! TGTTTTGATCTTGGTGTGTT+TGG + chr8_1:72927428-72927447 None:intergenic 35.0%
!!! GTTGCAGAATGTTTTGATCT+TGG + chr8_1:72927437-72927456 None:intergenic 35.0%
CAACTAACTCGTTAAGCATT+AGG + chr8_1:72927686-72927705 None:intergenic 35.0%
! GTACCCTAAAAATGGCTTTT+AGG - chr8_1:72927763-72927782 Msa1212900:intron 35.0%
!! CAAAGCATCCTTTTTGTTAG+AGG - chr8_1:72928052-72928071 Msa1212900:intron 35.0%
TAGAGGTAAATTCATACGGT+TGG - chr8_1:72928069-72928088 Msa1212900:intron 35.0%
GAGAAGGTTCATAAGTATGA+AGG - chr8_1:72928183-72928202 Msa1212900:intron 35.0%
AAGTATGAAGGTTCATTCCA+AGG - chr8_1:72928195-72928214 Msa1212900:intron 35.0%
! TTCAAGTTTGATGTCCTTGT+TGG - chr8_1:72928450-72928469 Msa1212900:intron 35.0%
!! AGATGCTTGTCTTGTTTAAG+TGG - chr8_1:72928490-72928509 Msa1212900:intron 35.0%
!! GATGCTTGTCTTGTTTAAGT+GGG - chr8_1:72928491-72928510 Msa1212900:intron 35.0%
CAAAGCAGAGAAATAATGAC+AGG - chr8_1:72928602-72928621 Msa1212900:intron 35.0%
! TTTGAAGCAAACAGCAATGT+TGG + chr8_1:72928679-72928698 None:intergenic 35.0%
!! AACATTGCTGTTTGCTTCAA+AGG - chr8_1:72928678-72928697 Msa1212900:intron 35.0%
GGTATCCATAATGTAGAATC+TGG - chr8_1:72928742-72928761 Msa1212900:intron 35.0%
TCAAGCCAGATTCTACATTA+TGG + chr8_1:72928750-72928769 None:intergenic 35.0%
! ATAGTCTGAGATTCTACTGA+AGG + chr8_1:72928952-72928971 None:intergenic 35.0%
! TTTCTCTTTCAGCTTTTCAC+TGG + chr8_1:72928983-72929002 None:intergenic 35.0%
GTACACACTTGATATGCTAA+TGG + chr8_1:72929028-72929047 None:intergenic 35.0%
ATATCAAGTGTGTACTCACA+AGG - chr8_1:72929033-72929052 Msa1212900:intron 35.0%
TATCAAGTGTGTACTCACAA+GGG - chr8_1:72929034-72929053 Msa1212900:intron 35.0%
AAGTTGTGTTGGACATGATA+TGG - chr8_1:72929132-72929151 Msa1212900:intron 35.0%
GAGCATTTGTGGATAGAAAT+TGG - chr8_1:72929169-72929188 Msa1212900:intron 35.0%
AATTGTTAGATGACTGTGGA+TGG + chr8_1:72929226-72929245 None:intergenic 35.0%
!!! GTTTTTTAATCCTCATGGCT+GGG + chr8_1:72929283-72929302 None:intergenic 35.0%
!!! AGTTTTTTAATCCTCATGGC+TGG + chr8_1:72929284-72929303 None:intergenic 35.0%
AGTGAAGTAAGTCCAAGTTT+AGG + chr8_1:72929340-72929359 None:intergenic 35.0%
!! CTAGGTTGATCCATATATTG+TGG + chr8_1:72929576-72929595 None:intergenic 35.0%
! AAGTTTTCCAACAACATGCT+AGG + chr8_1:72929594-72929613 None:intergenic 35.0%
TAAATGTGCTATACTTGGAC+AGG - chr8_1:72929762-72929781 Msa1212900:five_prime_UTR 35.0%
TTTATCACAGGCTAGCATTT+CGG - chr8_1:72929829-72929848 Msa1212900:five_prime_UTR 35.0%
! ATTTCGGTGCAAATTGAACT+TGG - chr8_1:72929845-72929864 Msa1212900:five_prime_UTR 35.0%
TATACCTTGGAAACACACAT+TGG + chr8_1:72929905-72929924 None:intergenic 35.0%
!! CATGTAGTGTCTTAGTTTGT+TGG - chr8_1:72930291-72930310 Msa1212900:intron 35.0%
TAAATAATGAGCTACGGAAG+AGG + chr8_1:72930520-72930539 None:intergenic 35.0%
TTGTTTACTTGACCTTTCCT+TGG - chr8_1:72930602-72930621 Msa1212900:five_prime_UTR 35.0%
AATAGAAGCAATCCAAGGAA+AGG + chr8_1:72930617-72930636 None:intergenic 35.0%
! CGCTCTGTGATTGAAGATTT+TGG - chr8_1:72922117-72922136 Msa1212900:intron 40.0%
TGATTATCGAACGACCTTTG+TGG - chr8_1:72922150-72922169 Msa1212900:intron 40.0%
! AAACTTTTCTGTGCGGAAAC+AGG - chr8_1:72922668-72922687 Msa1212900:three_prime_UTR 40.0%
TATACAGTACCTTGAGCAGA+TGG + chr8_1:72922767-72922786 None:intergenic 40.0%
GAAAAACATGGCAACAACAG+AGG + chr8_1:72922852-72922871 None:intergenic 40.0%
! CATGTTTTTCTGTGTGACGT+GGG - chr8_1:72922862-72922881 Msa1212900:three_prime_UTR 40.0%
! ATGTTTTTCTGTGTGACGTG+GGG - chr8_1:72922863-72922882 Msa1212900:three_prime_UTR 40.0%
ATTAAATACAGGTCACGTGC+AGG + chr8_1:72922993-72923012 None:intergenic 40.0%
CGTGACCTGTATTTAATCAC+AGG - chr8_1:72922996-72923015 Msa1212900:three_prime_UTR 40.0%
ATTTCACATCAGGCTCGATA+AGG - chr8_1:72923223-72923242 Msa1212900:CDS 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr8_1:72923574-72923593 None:intergenic 40.0%
GTGTGAGAGAAAAGTTGAAG+AGG + chr8_1:72923446-72923465 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr8_1:72923574-72923593 Msa1212900:intron 40.0%
TAGTTGCAAGCAGAGTTACT+CGG + chr8_1:72923671-72923690 None:intergenic 40.0%
AGTAACTCTGCTTGCAACTA+TGG - chr8_1:72923671-72923690 Msa1212900:intron 40.0%
ATGTATGACATGCAGGTCAA+GGG + chr8_1:72924890-72924909 None:intergenic 40.0%
AATGTATGACATGCAGGTCA+AGG + chr8_1:72924891-72924910 None:intergenic 40.0%
GAAGGAAATGTATGACATGC+AGG + chr8_1:72924897-72924916 None:intergenic 40.0%
TGCTGTTCATGCATGAAAGA+AGG + chr8_1:72924915-72924934 None:intergenic 40.0%
TCAAGACCCATGATTTCTTG+CGG - chr8_1:72924942-72924961 Msa1212900:intron 40.0%
AGCCACAGATGAAATCTCAT+CGG - chr8_1:72925006-72925025 Msa1212900:intron 40.0%
!! ATGAAGCTGGTGTTGCTAAA+GGG + chr8_1:72925048-72925067 None:intergenic 40.0%
TTCAAGCGGTTTCACATTGT+GGG - chr8_1:72925243-72925262 Msa1212900:intron 40.0%
! GGAAGAGTCTGAGATTAGAA+AGG - chr8_1:72925264-72925283 Msa1212900:intron 40.0%
GAGATTAGAAAGGGAAAGAC+AGG - chr8_1:72925274-72925293 Msa1212900:intron 40.0%
TAGAAAGGGAAAGACAGGAA+AGG - chr8_1:72925279-72925298 Msa1212900:intron 40.0%
AAGTGTTAGTATCTTGGGGT+TGG + chr8_1:72925548-72925567 None:intergenic 40.0%
! TCCGGTCCTTATGTTTTTCA+AGG + chr8_1:72925655-72925674 None:intergenic 40.0%
! CGTAGCTTTTACTACTGGAA+TGG - chr8_1:72925950-72925969 Msa1212900:intron 40.0%
ATTATGCGAGGCAAAACCAT+TGG + chr8_1:72926016-72926035 None:intergenic 40.0%
! TATGCCTTTTGTCTACACCA+CGG - chr8_1:72926203-72926222 Msa1212900:intron 40.0%
GGAAATGATGAAATCTGCAC+AGG - chr8_1:72926779-72926798 Msa1212900:intron 40.0%
!!! CATTTTCTAGCTCTTCATCC+TGG + chr8_1:72926812-72926831 None:intergenic 40.0%
GAATCCTCGAATGTTCAAAG+AGG - chr8_1:72926855-72926874 Msa1212900:CDS 40.0%
!!! TGGTGTGTTTGGCTTTTGAT+CGG + chr8_1:72927417-72927436 None:intergenic 40.0%
AGAGAAGAATTCCGTGCTAT+TGG - chr8_1:72927633-72927652 Msa1212900:intron 40.0%
! GAGAAGAATTCCGTGCTATT+GGG - chr8_1:72927634-72927653 Msa1212900:intron 40.0%
! AGTAAAAGTGTGGCTGAACA+AGG + chr8_1:72927847-72927866 None:intergenic 40.0%
! TTGTTCAGCCACACTTTTAC+TGG - chr8_1:72927846-72927865 Msa1212900:intron 40.0%
! TGTTCAGCCACACTTTTACT+GGG - chr8_1:72927847-72927866 Msa1212900:intron 40.0%
TTCCACACAGTGATCAAAAG+AGG - chr8_1:72928027-72928046 Msa1212900:intron 40.0%
TCCACACAGTGATCAAAAGA+GGG - chr8_1:72928028-72928047 Msa1212900:intron 40.0%
ATGAAGGTTCATTCCAAGGT+TGG - chr8_1:72928199-72928218 Msa1212900:intron 40.0%
! GAAAGTGTGGTATTTACCCA+TGG + chr8_1:72928249-72928268 None:intergenic 40.0%
CAGCTTAAGATAGGAAAGTG+TGG + chr8_1:72928262-72928281 None:intergenic 40.0%
TTGCTCAGTCAATTCCAACA+AGG + chr8_1:72928467-72928486 None:intergenic 40.0%
CGAGATTGAAAACTTTCTGC+TGG + chr8_1:72928628-72928647 None:intergenic 40.0%
! GCAGAAAGTTTTCAATCTCG+TGG - chr8_1:72928628-72928647 Msa1212900:intron 40.0%
CGGATGATCTATTGTCTTCA+TGG + chr8_1:72928785-72928804 None:intergenic 40.0%
AAGACAATAGATCATCCGTC+TGG - chr8_1:72928787-72928806 Msa1212900:intron 40.0%
! TCCGTCTGGAATAACAAACA+AGG - chr8_1:72928801-72928820 Msa1212900:intron 40.0%
!! GCCTTGTTTGTTATTCCAGA+CGG + chr8_1:72928805-72928824 None:intergenic 40.0%
TTAACTTCAACCCAAATCGG+AGG - chr8_1:72928859-72928878 Msa1212900:intron 40.0%
TATCCACAAATGCTCACTAG+GGG + chr8_1:72929164-72929183 None:intergenic 40.0%
CTATCCACAAATGCTCACTA+GGG + chr8_1:72929165-72929184 None:intergenic 40.0%
TCTATCCACAAATGCTCACT+AGG + chr8_1:72929166-72929185 None:intergenic 40.0%
GTGGATAGAAATTGGAGATG+TGG - chr8_1:72929177-72929196 Msa1212900:intron 40.0%
ATAGAAATTGGAGATGTGGC+AGG - chr8_1:72929181-72929200 Msa1212900:intron 40.0%
TATATATTCACCCAGCCATG+AGG - chr8_1:72929270-72929289 Msa1212900:intron 40.0%
TTCTGTTTGCAGCCTAAACT+TGG - chr8_1:72929325-72929344 Msa1212900:intron 40.0%
GTGGACATCTATTCAGAGAA+AGG + chr8_1:72929364-72929383 None:intergenic 40.0%
AGCAACATGAATTGCACAAG+TGG + chr8_1:72929383-72929402 None:intergenic 40.0%
! TTCAGGAGTGGATTTATCAC+AGG - chr8_1:72929817-72929836 Msa1212900:five_prime_UTR 40.0%
!! CACATTGGCATTGGTATGTT+TGG + chr8_1:72929890-72929909 None:intergenic 40.0%
TTGGAAACACACATTGGCAT+TGG + chr8_1:72929899-72929918 None:intergenic 40.0%
AATGCCAATGTGTGTTTCCA+AGG - chr8_1:72929898-72929917 Msa1212900:five_prime_UTR 40.0%
! TTTGTCGATCATTTTCCCCT+AGG - chr8_1:72930025-72930044 Msa1212900:five_prime_UTR 40.0%
AAGGATCTTCATCATCCTAG+GGG + chr8_1:72930043-72930062 None:intergenic 40.0%
GAAGGATCTTCATCATCCTA+GGG + chr8_1:72930044-72930063 None:intergenic 40.0%
AGAAGGATCTTCATCATCCT+AGG + chr8_1:72930045-72930064 None:intergenic 40.0%
TGCTGGATTATTATCCTGCA+TGG - chr8_1:72930253-72930272 Msa1212900:intron 40.0%
!! CTTAGTTTGTTGGGATCCTT+AGG - chr8_1:72930301-72930320 Msa1212900:intron 40.0%
CGCACTCTTAACTCGTTGTT+TGG - chr8_1:72921883-72921902 Msa1212900:three_prime_UTR 45.0%
CTTCCTCAAGCACGTTCTTA+TGG - chr8_1:72922539-72922558 Msa1212900:three_prime_UTR 45.0%
! AGATGGCCTTGGATCTTGTT+CGG + chr8_1:72922750-72922769 None:intergenic 45.0%
CCACGTCACACAGAAAAACA+TGG + chr8_1:72922864-72922883 None:intergenic 45.0%
! CCATGTTTTTCTGTGTGACG+TGG - chr8_1:72922861-72922880 Msa1212900:three_prime_UTR 45.0%
!! TTTCCTATGGTGGATTCCGA+AGG - chr8_1:72923087-72923106 Msa1212900:three_prime_UTR 45.0%
AATCCTTCGGAATCCACCAT+AGG + chr8_1:72923093-72923112 None:intergenic 45.0%
ATGCTGCACACTTTATCGGA+CGG + chr8_1:72923157-72923176 None:intergenic 45.0%
CCTCATGCTGCACACTTTAT+CGG + chr8_1:72923161-72923180 None:intergenic 45.0%
TAAAGTGTGCAGCATGAGGA+TGG - chr8_1:72923162-72923181 Msa1212900:CDS 45.0%
ACATCAGGCTCGATAAGGAT+TGG - chr8_1:72923228-72923247 Msa1212900:CDS 45.0%
TAAACTACACCACACGCACA+CGG + chr8_1:72923259-72923278 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr8_1:72923573-72923592 None:intergenic 45.0%
!! ATGAGTGTCGCTTTAGGCTT+TGG + chr8_1:72923563-72923582 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr8_1:72923573-72923592 Msa1212900:intron 45.0%
AAGTGCATTAAATGGTGCGC+AGG + chr8_1:72924708-72924727 None:intergenic 45.0%
GCAAGAAATCATGGGTCTTG+AGG + chr8_1:72924943-72924962 None:intergenic 45.0%
TAGTGGCCGCAAGAAATCAT+GGG + chr8_1:72924951-72924970 None:intergenic 45.0%
! TTCTTCCTTGGCACTGGATT+TGG + chr8_1:72924987-72925006 None:intergenic 45.0%
TTCATCTGTGGCTTCTTCCT+TGG + chr8_1:72924999-72925018 None:intergenic 45.0%
CACCGATGAGATTTCATCTG+TGG + chr8_1:72925011-72925030 None:intergenic 45.0%
CACAGATGAAATCTCATCGG+TGG - chr8_1:72925009-72925028 Msa1212900:intron 45.0%
!! TGAAGCTGGTGTTGCTAAAG+GGG + chr8_1:72925047-72925066 None:intergenic 45.0%
!! GATGAAGCTGGTGTTGCTAA+AGG + chr8_1:72925049-72925068 None:intergenic 45.0%
ACCTCTTACCTGGAGGAATT+GGG - chr8_1:72925077-72925096 Msa1212900:intron 45.0%
CTATAAGTCCCAATTCCTCC+AGG + chr8_1:72925088-72925107 None:intergenic 45.0%
! AGTGATGATGCTTCTGCCTT+TGG + chr8_1:72925157-72925176 None:intergenic 45.0%
TGTGCATCAAGCAACTAGTG+CGG - chr8_1:72925183-72925202 Msa1212900:intron 45.0%
TGAAGTATGTGAGCTGCAGT+TGG + chr8_1:72925227-72925246 None:intergenic 45.0%
TGCAGCTCACATACTTCAAG+CGG - chr8_1:72925229-72925248 Msa1212900:intron 45.0%
CTTCAAGCGGTTTCACATTG+TGG - chr8_1:72925242-72925261 Msa1212900:intron 45.0%
GTTGGGGACAAACCCATTAT+AGG - chr8_1:72925310-72925329 Msa1212900:CDS 45.0%
GAATGACACTAGATAGGGTG+TGG - chr8_1:72926356-72926375 Msa1212900:intron 45.0%
! TTGAAGCTGACTTCCTAGAC+AGG + chr8_1:72926389-72926408 None:intergenic 45.0%
GCAGATTCTGCTGCTAAGTT+AGG - chr8_1:72926524-72926543 Msa1212900:intron 45.0%
GTTAGGTCAGTGGACATTGA+AGG - chr8_1:72926541-72926560 Msa1212900:intron 45.0%
TGCTACTGCCTTTCTCAACA+AGG + chr8_1:72926896-72926915 None:intergenic 45.0%
! AATTCCGTGCTATTGGGACT+TGG - chr8_1:72927640-72927659 Msa1212900:intron 45.0%
! ATTCCGTGCTATTGGGACTT+GGG - chr8_1:72927641-72927660 Msa1212900:intron 45.0%
TTGGGAGTAGTGTAACTGGA+AGG - chr8_1:72927659-72927678 Msa1212900:intron 45.0%
! GTTCAGCCACACTTTTACTG+GGG - chr8_1:72927848-72927867 Msa1212900:intron 45.0%
! TCCCTCTTTTGATCACTGTG+TGG + chr8_1:72928032-72928051 None:intergenic 45.0%
AGCCAGAAAAACTGATGCCA+TGG - chr8_1:72928229-72928248 Msa1212900:intron 45.0%
GCCAGAAAAACTGATGCCAT+GGG - chr8_1:72928230-72928249 Msa1212900:intron 45.0%
! ACCCATGGCATCAGTTTTTC+TGG + chr8_1:72928234-72928253 None:intergenic 45.0%
TTTCAATCTCGTGGCGCAAA+TGG - chr8_1:72928637-72928656 Msa1212900:intron 45.0%
GCAAACAGCAATGTTGGAGA+TGG + chr8_1:72928673-72928692 None:intergenic 45.0%
! ATCTGGCTTGAGCACAACAA+CGG - chr8_1:72928759-72928778 Msa1212900:intron 45.0%
GGTTGGGAAGAAATAGGACT+TGG + chr8_1:72928832-72928851 None:intergenic 45.0%
TCAACCCAAATCGGAGGTTT+AGG - chr8_1:72928865-72928884 Msa1212900:intron 45.0%
TCCACCTAAACCTCCGATTT+GGG + chr8_1:72928872-72928891 None:intergenic 45.0%
GAGAAAGAGCTCACCATTGA+AGG - chr8_1:72928997-72929016 Msa1212900:intron 45.0%
AAAGAGCTCACCATTGAAGG+AGG - chr8_1:72929000-72929019 Msa1212900:intron 45.0%
GGATCAACCTAGCATGTTGT+TGG - chr8_1:72929584-72929603 Msa1212900:intron 45.0%
GCTATACTTGGACAGGTTGT+TGG - chr8_1:72929769-72929788 Msa1212900:five_prime_UTR 45.0%
! GCATTGGTATGTTTGGTCTG+AGG + chr8_1:72929883-72929902 None:intergenic 45.0%
AATCAAAGGAAGATGCGCTC+TGG - chr8_1:72930068-72930087 Msa1212900:intron 45.0%
! GGGGTATTTATTTCCTGTGC+TGG - chr8_1:72930236-72930255 Msa1212900:intron 45.0%
GCAGGATAATAATCCAGCAC+AGG + chr8_1:72930252-72930271 None:intergenic 45.0%
ACAGTCAATCTCATCCATGC+AGG + chr8_1:72930270-72930289 None:intergenic 45.0%
ACAGCTTGTATCAGTATGGG+AGG + chr8_1:72930386-72930405 None:intergenic 45.0%
!!! ATAATTTGTTTTATAATTTT+TGG - chr8_1:72922784-72922803 Msa1212900:three_prime_UTR 5.0%
!! TAATATTCTATAAATAAATA+TGG - chr8_1:72924167-72924186 Msa1212900:intron 5.0%
!! ATAATACTAAAAAATAAATT+TGG + chr8_1:72927150-72927169 None:intergenic 5.0%
!! ATAATTGATAAAAATTATTA+AGG + chr8_1:72930184-72930203 None:intergenic 5.0%
!!! AATAATTTTTATCAATTATT+TGG - chr8_1:72930185-72930204 Msa1212900:intron 5.0%
!!! ATAATTTTTATCAATTATTT+GGG - chr8_1:72930186-72930205 Msa1212900:intron 5.0%
!!! AACTTTTTAAAATTAATTTT+TGG - chr8_1:72930211-72930230 Msa1212900:intron 5.0%
CGAAAGATGAGGTCTTGGGT+CGG + chr8_1:72921629-72921648 None:intergenic 50.0%
GCAGCGAAAGATGAGGTCTT+GGG + chr8_1:72921633-72921652 None:intergenic 50.0%
TGCAGCGAAAGATGAGGTCT+TGG + chr8_1:72921634-72921653 None:intergenic 50.0%
GCTCCATAAGAACGTGCTTG+AGG + chr8_1:72922545-72922564 None:intergenic 50.0%
TTCTGTGCGGAAACAGGAAC+AGG - chr8_1:72922674-72922693 Msa1212900:three_prime_UTR 50.0%
TCTGTGCGGAAACAGGAACA+GGG - chr8_1:72922675-72922694 Msa1212900:three_prime_UTR 50.0%
CAACTGCCGAACAAGATCCA+AGG - chr8_1:72922741-72922760 Msa1212900:three_prime_UTR 50.0%
CCGATAAAGTGTGCAGCATG+AGG - chr8_1:72923158-72923177 Msa1212900:CDS 50.0%
TGTGCAGCATGAGGATGGTA+GGG - chr8_1:72923167-72923186 Msa1212900:CDS 50.0%
AAACTACACCACACGCACAC+GGG + chr8_1:72923258-72923277 None:intergenic 50.0%
CTAGTGGCCGCAAGAAATCA+TGG + chr8_1:72924952-72924971 None:intergenic 50.0%
TGATTTCTTGCGGCCACTAG+AGG - chr8_1:72924952-72924971 Msa1212900:intron 50.0%
TTGGCTTCTACCTCCTCTAG+TGG + chr8_1:72924968-72924987 None:intergenic 50.0%
AGAAGCCAAATCCAGTGCCA+AGG - chr8_1:72924979-72924998 Msa1212900:intron 50.0%
!! GAAGCTGGTGTTGCTAAAGG+GGG + chr8_1:72925046-72925065 None:intergenic 50.0%
AGGTGCTCAACTGATGAAGC+TGG + chr8_1:72925061-72925080 None:intergenic 50.0%
TCAGTTGAGCACCTCTTACC+TGG - chr8_1:72925067-72925086 Msa1212900:intron 50.0%
CACCTCTTACCTGGAGGAAT+TGG - chr8_1:72925076-72925095 Msa1212900:intron 50.0%
TCCCAATTCCTCCAGGTAAG+AGG + chr8_1:72925081-72925100 None:intergenic 50.0%
GGGGACAAACCCATTATAGG+AGG - chr8_1:72925313-72925332 Msa1212900:CDS 50.0%
CATGGACACACACACACACA+TGG - chr8_1:72925837-72925856 Msa1212900:intron 50.0%
TGACACTAGATAGGGTGTGG+CGG - chr8_1:72926359-72926378 Msa1212900:intron 50.0%
CTGCTGCTAAGTTAGGTCAG+TGG - chr8_1:72926531-72926550 Msa1212900:intron 50.0%
AGGAGAACTAAGGGTGAGAG+TGG - chr8_1:72927379-72927398 Msa1212900:intron 50.0%
GAACTAAGGGTGAGAGTGGA+CGG - chr8_1:72927383-72927402 Msa1212900:intron 50.0%
GAGACACTTGCAAACTGCGA+TGG - chr8_1:72927539-72927558 Msa1212900:intron 50.0%
ACACTTGCAAACTGCGATGG+AGG - chr8_1:72927542-72927561 Msa1212900:intron 50.0%
ACTCCCAAGTCCCAATAGCA+CGG + chr8_1:72927647-72927666 None:intergenic 50.0%
GGACTTGGGAGTAGTGTAAC+TGG - chr8_1:72927655-72927674 Msa1212900:intron 50.0%
! AGCCACACTTTTACTGGGGT+TGG - chr8_1:72927852-72927871 Msa1212900:intron 50.0%
! GCCACACTTTTACTGGGGTT+GGG - chr8_1:72927853-72927872 Msa1212900:intron 50.0%
TCCCAACCCCAGTAAAAGTG+TGG + chr8_1:72927857-72927876 None:intergenic 50.0%
TTACTGGGGTTGGGATTGTC+TGG - chr8_1:72927862-72927881 Msa1212900:intron 50.0%
! CTGGCTCGTTATTCCAACCT+TGG + chr8_1:72928215-72928234 None:intergenic 50.0%
AATCTCGTGGCGCAAATGGT+GGG - chr8_1:72928641-72928660 Msa1212900:intron 50.0%
ACCATCTCCCCAACAACTCA+TGG - chr8_1:72928718-72928737 Msa1212900:intron 50.0%
CCATCTCCCCAACAACTCAT+GGG - chr8_1:72928719-72928738 Msa1212900:intron 50.0%
CATCTCCCCAACAACTCATG+GGG - chr8_1:72928720-72928739 Msa1212900:intron 50.0%
ATCTCCCCAACAACTCATGG+GGG - chr8_1:72928721-72928740 Msa1212900:intron 50.0%
GATACCCCCATGAGTTGTTG+GGG + chr8_1:72928728-72928747 None:intergenic 50.0%
GGATACCCCCATGAGTTGTT+GGG + chr8_1:72928729-72928748 None:intergenic 50.0%
TGGATACCCCCATGAGTTGT+TGG + chr8_1:72928730-72928749 None:intergenic 50.0%
ACCCAAATCGGAGGTTTAGG+TGG - chr8_1:72928868-72928887 Msa1212900:intron 50.0%
CTCCACCTAAACCTCCGATT+TGG + chr8_1:72928873-72928892 None:intergenic 50.0%
GCTAATGGCACCTCCTTCAA+TGG + chr8_1:72929013-72929032 None:intergenic 50.0%
CATCCCCTAGTGAGCATTTG+TGG - chr8_1:72929158-72929177 Msa1212900:intron 50.0%
ACACATGCCTTGCAGAGTTC+AGG - chr8_1:72929800-72929819 Msa1212900:five_prime_UTR 50.0%
ATCCACTCCTGAACTCTGCA+AGG + chr8_1:72929810-72929829 None:intergenic 50.0%
! ATTTTGTTGGGGGGAGCCTA+AGG + chr8_1:72930320-72930339 None:intergenic 50.0%
! GCTATCACAATGAGGGTGTG+AGG + chr8_1:72930546-72930565 None:intergenic 50.0%
! GAGCACTGCAGCGAAAGATG+AGG + chr8_1:72921640-72921659 None:intergenic 55.0%
GCACGTTCTTATGGAGCCGA+AGG - chr8_1:72922548-72922567 Msa1212900:three_prime_UTR 55.0%
GATCCAAGGCCATCTGCTCA+AGG - chr8_1:72922755-72922774 Msa1212900:three_prime_UTR 55.0%
GTACCTTGAGCAGATGGCCT+TGG + chr8_1:72922761-72922780 None:intergenic 55.0%
TCTGTGTGACGTGGGGATCA+TGG - chr8_1:72922870-72922889 Msa1212900:three_prime_UTR 55.0%
GTGTGCAGCATGAGGATGGT+AGG - chr8_1:72923166-72923185 Msa1212900:CDS 55.0%
GTGCAGCATGAGGATGGTAG+GGG - chr8_1:72923168-72923187 Msa1212900:CDS 55.0%
TGCAGCATGAGGATGGTAGG+GGG - chr8_1:72923169-72923188 Msa1212900:CDS 55.0%
! TGGTAGGGGGCCCATTTTGA+TGG - chr8_1:72923182-72923201 Msa1212900:CDS 55.0%
TTTCTTGCGGCCACTAGAGG+AGG - chr8_1:72924955-72924974 Msa1212900:intron 55.0%
TGTGGCTTCTTCCTTGGCAC+TGG + chr8_1:72924993-72925012 None:intergenic 55.0%
GTTGAGCACCTCTTACCTGG+AGG - chr8_1:72925070-72925089 Msa1212900:intron 55.0%
!! GTGTGGCGGATTACCTGTCT+AGG - chr8_1:72926373-72926392 Msa1212900:intron 55.0%
ATCTGCACAGGATTGTGCCC+AGG - chr8_1:72926791-72926810 Msa1212900:intron 55.0%
TTGGGATTGTCTGGCGGCTT+TGG - chr8_1:72927871-72927890 Msa1212900:intron 55.0%
CAATCTCGTGGCGCAAATGG+TGG - chr8_1:72928640-72928659 Msa1212900:intron 55.0%
CCCATGAGTTGTTGGGGAGA+TGG + chr8_1:72928722-72928741 None:intergenic 55.0%
GGAGATGTGGCAGGTGATTG+TGG - chr8_1:72929190-72929209 Msa1212900:intron 55.0%
TGCCTTGCAGAGTTCAGGAG+TGG - chr8_1:72929805-72929824 Msa1212900:five_prime_UTR 55.0%
GTGCGGAAACAGGAACAGGG+AGG - chr8_1:72922678-72922697 Msa1212900:three_prime_UTR 60.0%
TTGGCATTCCCGTGTGCGTG+TGG - chr8_1:72923247-72923266 Msa1212900:CDS 60.0%
CTGGGGTTGGGATTGTCTGG+CGG - chr8_1:72927865-72927884 Msa1212900:intron 60.0%
!! CGCTCTGGCTCTAGAGTCAC+TGG - chr8_1:72930083-72930102 Msa1212900:intron 60.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 72921527 72930650 72921527 ID=Msa1212900;Name=Msa1212900
chr8_1 mRNA 72921527 72930650 72921527 ID=Msa1212900-mRNA-1;Parent=Msa1212900;Name=Msa1212900-mRNA-1;_AED=0.04;_eAED=0.04;_QI=747|0.90|0.83|1|0.72|0.58|12|1464|489
chr8_1 exon 72921527 72922130 72921527 ID=Msa1212900-mRNA-1:exon:24722;Parent=Msa1212900-mRNA-1
chr8_1 exon 72922258 72923567 72922258 ID=Msa1212900-mRNA-1:exon:24721;Parent=Msa1212900-mRNA-1
chr8_1 exon 72923926 72924021 72923926 ID=Msa1212900-mRNA-1:exon:24720;Parent=Msa1212900-mRNA-1
chr8_1 exon 72924104 72924173 72924104 ID=Msa1212900-mRNA-1:exon:24719;Parent=Msa1212900-mRNA-1
chr8_1 exon 72924688 72924796 72924688 ID=Msa1212900-mRNA-1:exon:24718;Parent=Msa1212900-mRNA-1
chr8_1 exon 72925301 72925428 72925301 ID=Msa1212900-mRNA-1:exon:24717;Parent=Msa1212900-mRNA-1
chr8_1 exon 72925550 72925649 72925550 ID=Msa1212900-mRNA-1:exon:24716;Parent=Msa1212900-mRNA-1
chr8_1 exon 72926843 72927017 72926843 ID=Msa1212900-mRNA-1:exon:24715;Parent=Msa1212900-mRNA-1
chr8_1 exon 72927027 72927244 72927027 ID=Msa1212900-mRNA-1:exon:24714;Parent=Msa1212900-mRNA-1
chr8_1 exon 72929401 72929487 72929401 ID=Msa1212900-mRNA-1:exon:24713;Parent=Msa1212900-mRNA-1
chr8_1 exon 72929608 72930083 72929608 ID=Msa1212900-mRNA-1:exon:24712;Parent=Msa1212900-mRNA-1
chr8_1 exon 72930343 72930650 72930343 ID=Msa1212900-mRNA-1:exon:24711;Parent=Msa1212900-mRNA-1
chr8_1 five_prime_UTR 72930343 72930650 72930343 ID=Msa1212900-mRNA-1:five_prime_utr;Parent=Msa1212900-mRNA-1
chr8_1 five_prime_UTR 72929645 72930083 72929645 ID=Msa1212900-mRNA-1:five_prime_utr;Parent=Msa1212900-mRNA-1
chr8_1 CDS 72929608 72929644 72929608 ID=Msa1212900-mRNA-1:cds;Parent=Msa1212900-mRNA-1
chr8_1 CDS 72929401 72929487 72929401 ID=Msa1212900-mRNA-1:cds;Parent=Msa1212900-mRNA-1
chr8_1 CDS 72927027 72927244 72927027 ID=Msa1212900-mRNA-1:cds;Parent=Msa1212900-mRNA-1
chr8_1 CDS 72926843 72927017 72926843 ID=Msa1212900-mRNA-1:cds;Parent=Msa1212900-mRNA-1
chr8_1 CDS 72925550 72925649 72925550 ID=Msa1212900-mRNA-1:cds;Parent=Msa1212900-mRNA-1
chr8_1 CDS 72925301 72925428 72925301 ID=Msa1212900-mRNA-1:cds;Parent=Msa1212900-mRNA-1
chr8_1 CDS 72924688 72924796 72924688 ID=Msa1212900-mRNA-1:cds;Parent=Msa1212900-mRNA-1
chr8_1 CDS 72924104 72924173 72924104 ID=Msa1212900-mRNA-1:cds;Parent=Msa1212900-mRNA-1
chr8_1 CDS 72923926 72924021 72923926 ID=Msa1212900-mRNA-1:cds;Parent=Msa1212900-mRNA-1
chr8_1 CDS 72923118 72923567 72923118 ID=Msa1212900-mRNA-1:cds;Parent=Msa1212900-mRNA-1
chr8_1 three_prime_UTR 72922258 72923117 72922258 ID=Msa1212900-mRNA-1:three_prime_utr;Parent=Msa1212900-mRNA-1
chr8_1 three_prime_UTR 72921527 72922130 72921527 ID=Msa1212900-mRNA-1:three_prime_utr;Parent=Msa1212900-mRNA-1
Gene Sequence

>Msa1212900

ATGGAGCTTCCTCAAGCACGTTCTTATGGAGCCGAAGGAACAGGGAGGAAATCGACGCATGATTTTCTGTCGCTATACAGTAGTAATTCAACTGCCGAACAAGATCCAAGGCCATCTGCTCAAGCAAGTTTCCTCAAGACCCATGATTTCTTGCGGCCACTAGAGGAGGTAGAAGCCAAATCCAGTGCCAAGGAAGAAGCCACAGATGAAATCTCATCGGTGGTTGAGAAGCAACCCCCTTTAGCAACACCAGCTTCATCAGTTGAGCACCTCTTACCTGGAGGAATTGGGACTTATAGTATCAGCCACATTAATTCCTGCGTGAATAATAATAATCAAAGGGCAGAAGCATCATCACTTTTCACTGTGCATCAAGCAACTAGTGCGGATAGAAATGATGACAACTCCAACTGCAGCTCACATACTTCAAGCGGTTTCACATTGTGGGAAGAGTCTGAGATTAGAAAGGGAAAGACAGGAAAGGAGAATAATGTTGGGGACAAACCCATTATAGGAGATTCTGCTGCTAAGTTAGGTCAGTGGACATTGAAGGAGCGAACGTCTCAATCGTTTTCTAACAATCATCATGGCAGCTTCAACTCTCGCTCTTCATCTCAGACAACTGGACAGAAGAACCAGAGTTTTATGGAAATGATGAAATCTGCACAGGATTGTGCCCAGGATGAAGAGCTAGAAAATGAAGGAACGTTTTTTCTCAAGAGAGAATCCTCGAATGTTCAAAGAGGAGAACTAAGGGTGAGAGTGGACGGCAAGAGTACCGATCAAAAGCCAAACACACCAAGATCAAAACATTCTGCAACAGAGCAGCGAAGAAGAAGCAAAATTAATGACAGGTTTCAGATGCTACGAGAGCTTATTCCACACAGTGATCAAAAGAGGGACAAAGCATCCTTTTTGTTAGAGGTCATTGAGTACATTCACTTTTTACAAGAGAAGGTTCATAAGTATGAAGGTTCATTCCAAGGTTGGAATAACGAGCCAGAAAAACTGATGCCATGGAGAAATAATGACAGGCCAGCAGAAAGTTTTCAATCTCGTGGCGCAAATGGTGGGTCTAATCCATCTCCAACATTGCTGTTTGCTTCAAAGGTTGACGAGAAAAACATCACCATCTCCCCAACAACTCATGGGGGTATCCATAATGTAGAATCTGGCTTGAGCACAACAACGGCCATGAAGACAATAGATCATCCGTCTGGAATAACAAACAAGGCTTTTCCAAGTCCTATTTCTTCCCAACCAAATTTCTTAACTTCAACCCAAATCGGAGGTTTAGGTGGAGCAGTGTCTCAGCTCAGACGTAGATTATCATCTGATGCAGAGAACACCAATTATCAACCTTCAGTAGAATCTCAGACTATGACTTCAACCAGTGAAAAGCTGAAAGAGAAAGAGCTCACCATTGAAGGAGGTGCCATTAGCATATCAAGTGTGTACTCACAAGGGTGA
Protein sequence

>Msa1212900

MELPQARSYGAEGTGRKSTHDFLSLYSSNSTAEQDPRPSAQASFLKTHDFLRPLEEVEAKSSAKEEATDEISSVVEKQPPLATPASSVEHLLPGGIGTYSISHINSCVNNNNQRAEASSLFTVHQATSADRNDDNSNCSSHTSSGFTLWEESEIRKGKTGKENNVGDKPIIGDSAAKLGQWTLKERTSQSFSNNHHGSFNSRSSSQTTGQKNQSFMEMMKSAQDCAQDEELENEGTFFLKRESSNVQRGELRVRVDGKSTDQKPNTPRSKHSATEQRRRSKINDRFQMLRELIPHSDQKRDKASFLLEVIEYIHFLQEKVHKYEGSFQGWNNEPEKLMPWRNNDRPAESFQSRGANGGSNPSPTLLFASKVDEKNITISPTTHGGIHNVESGLSTTTAMKTIDHPSGITNKAFPSPISSQPNFLTSTQIGGLGGAVSQLRRRLSSDAENTNYQPSVESQTMTSTSEKLKEKELTIEGGAISISSVYSQG*