AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1260420

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1260420 MtrunA17_Chr4g0061791 98.167 491 7 2 1 491 1 489 0.0 989
Msa1260420 MtrunA17_Chr5g0420701 47.034 236 110 5 258 491 35 257 1.43e-58 196
Msa1260420 MtrunA17_Chr7g0220371 54.422 147 52 4 255 398 37 171 5.08e-38 142
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1260420 AT5G08130.7 47.441 508 204 19 1 491 1 462 5.03e-110 336
Msa1260420 AT5G08130.5 47.255 510 206 19 1 491 1 466 1.15e-109 335
Msa1260420 AT5G08130.2 47.244 508 206 19 1 491 1 463 2.78e-109 335
Msa1260420 AT5G08130.4 47.244 508 206 19 1 491 1 463 2.78e-109 335
Msa1260420 AT5G08130.8 47.059 510 208 19 1 491 1 467 4.60e-109 334
Msa1260420 AT5G08130.6 46.758 509 207 19 1 491 1 463 5.08e-107 328
Msa1260420 AT5G08130.3 46.966 379 154 13 122 491 2 342 7.73e-82 259
Msa1260420 AT5G08130.1 46.702 379 156 13 122 491 2 343 3.56e-81 258
Msa1260420 AT1G69010.1 41.132 265 118 10 229 489 8 238 1.73e-40 148
Msa1260420 AT5G38860.2 44.828 174 64 5 256 406 21 185 8.31e-34 127
Msa1260420 AT5G38860.1 37.549 253 106 9 256 484 21 245 2.63e-33 128

Find 207 sgRNAs with CRISPR-Local

Find 490 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGCTCTGTGATTGAAGATTT+TGG 0.130907 8_2:-62425596 Msa1260420:five_prime_UTR
TAAGAAGCAAATTGAAATTA+TGG 0.188070 8_2:+62418383 None:intergenic
GAAACCGTAATTCTCTTATT+AGG 0.205454 8_2:+62425378 None:intergenic
TTCTTCCTTGGCACTGGATT+TGG 0.224123 8_2:+62422828 None:intergenic
GAGCATTTGTGGATAGAAAT+TGG 0.227383 8_2:-62418639 Msa1260420:three_prime_UTR
AAGCTCTTGATTTGCGATTA+AGG 0.234916 8_2:-62425465 Msa1260420:five_prime_UTR
TTCATGGTTACCTCCTATAA+TGG 0.237349 8_2:+62422489 None:intergenic
CACCTCTTACCTGGAGGAAT+TGG 0.255162 8_2:-62422736 Msa1260420:CDS
AACTCAACAGAGAAAGTTAA+AGG 0.261850 8_2:-62426115 Msa1260420:five_prime_UTR
TGGGTTGAAGTTAAGAAATT+TGG 0.265205 8_2:+62418958 None:intergenic
CTTCCTCAAGCACGTTCTTA+TGG 0.267366 8_2:-62425123 Msa1260420:CDS
ATAAATATTTCCACAATATA+TGG 0.267977 8_2:-62418245 Msa1260420:three_prime_UTR
AAATGATAAATGTTGTAATT+AGG 0.289965 8_2:-62418117 Msa1260420:three_prime_UTR
TTCTACTGAAGGTTGATAAT+TGG 0.293752 8_2:+62418870 None:intergenic
AGTGATGATGCTTCTGGCTT+TGG 0.299245 8_2:+62422658 None:intergenic
ATGAATTGTTTGAATGGAAC+AGG 0.302336 8_2:+62418288 None:intergenic
AGAATTTCGAGAAAAGAAAA+TGG 0.303491 8_2:+62418143 None:intergenic
CTCCACCTAAACCTCCGATT+TGG 0.310407 8_2:+62418938 None:intergenic
AAGTTGTGTTGGACATGATA+TGG 0.317695 8_2:-62418676 Msa1260420:three_prime_UTR
AAATTTGGTTGGGAAGAAAT+AGG 0.321463 8_2:+62418973 None:intergenic
ATTACGGTTTCTACTAAATT+CGG 0.322606 8_2:-62425366 Msa1260420:five_prime_UTR
TTGTAATTAGGATGCCAAAT+TGG 0.328639 8_2:-62418105 Msa1260420:three_prime_UTR
CTTAGTTTGTTGGGATCCTT+AGG 0.342893 8_2:-62417507 Msa1260420:three_prime_UTR
TGAATTTACCTCTAACAAAA+AGG 0.343203 8_2:+62419748 None:intergenic
ATCTTCCTTTGATTCTTAGA+AGG 0.344596 8_2:+62417749 None:intergenic
TTCATCTGTGGCTTCTTCCT+TGG 0.345587 8_2:+62422816 None:intergenic
TGTGGCTTCTTCCTTGGCAC+TGG 0.347343 8_2:+62422822 None:intergenic
AACATTGCTGTTTGCTTCAA+AGG 0.352246 8_2:-62419130 Msa1260420:CDS
TCAACCCAAATCGGAGGTTT+AGG 0.354794 8_2:-62418943 Msa1260420:CDS
TCAAGCCAGATTCTACATTA+TGG 0.356652 8_2:+62419061 None:intergenic
GTTGGGGACAAACCCATTAT+AGG 0.362746 8_2:-62422502 Msa1260420:CDS
CTTCAAGCGGTTTCACTTTG+TGG 0.364828 8_2:-62422570 Msa1260420:CDS
ATGTAGTGTCTTAGTTTGTT+GGG 0.370568 8_2:-62417516 Msa1260420:three_prime_UTR
TCATGGTTACCTCCTATAAT+GGG 0.372435 8_2:+62422490 None:intergenic
CATGTAGTGTCTTAGTTTGT+TGG 0.372497 8_2:-62417517 Msa1260420:three_prime_UTR
ACACATGCCTTGCAGAGTTC+AGG 0.377988 8_2:-62418008 Msa1260420:three_prime_UTR
GGGGTATTTATTTCCTGTGC+TGG 0.378434 8_2:-62417572 Msa1260420:three_prime_UTR
TTTATCACAGGCTAGCATTT+CGG 0.379312 8_2:-62417979 Msa1260420:three_prime_UTR
CGGATGATCTATTGTCTTCA+TGG 0.382464 8_2:+62419026 None:intergenic
TCAACCTAATAAGAGAATTA+CGG 0.385828 8_2:-62425382 Msa1260420:five_prime_UTR
TTCTGTTTGCAGCCTAAACT+TGG 0.389433 8_2:-62418483 Msa1260420:three_prime_UTR
TCCACCTAAACCTCCGATTT+GGG 0.392555 8_2:+62418939 None:intergenic
GCAGATTCTGCTGCTAAGTT+AGG 0.392981 8_2:-62421279 Msa1260420:intron
CAATCACTCAATTATCATTA+CGG 0.400967 8_2:-62425903 Msa1260420:intron
ACAACTTCAAAATAGTATAA+AGG 0.408201 8_2:+62418692 None:intergenic
CATCCCCTAGTGAGCATTTG+TGG 0.408785 8_2:-62418650 Msa1260420:three_prime_UTR
AATCGCAAATCAAGAGCTTA+AGG 0.410435 8_2:+62425469 None:intergenic
CAAAGTAAATGTGCTATACT+TGG 0.413343 8_2:-62418051 Msa1260420:three_prime_UTR
GTACCTTGAGCAGATGGCCT+TGG 0.414119 8_2:+62424907 None:intergenic
CACATTGGCATTGGTATGTC+TGG 0.415087 8_2:+62417921 None:intergenic
TTCTTAACTTCAACCCAAAT+CGG 0.419263 8_2:-62418952 Msa1260420:CDS
TGTATAATGAATTGTTTGAA+TGG 0.421879 8_2:+62418282 None:intergenic
TGCAGCGAAAGATGAGGTCT+TGG 0.423397 8_2:+62426085 None:intergenic
TTGTTTACTTGACCTTTCCT+TGG 0.424889 8_2:-62417208 Msa1260420:three_prime_UTR
GTGAAAAGTGATGATGCTTC+TGG 0.427220 8_2:+62422652 None:intergenic
CTAATTATACAGGAGAACTA+AGG 0.429520 8_2:-62420436 Msa1260420:intron
CAATCTCGTGGCGCAAATGG+TGG 0.441241 8_2:-62419168 Msa1260420:CDS
AATCTTGAAAAGTATCTCAT+AGG 0.441412 8_2:+62417230 None:intergenic
GAATATATAAATACATTAGT+AGG 0.441540 8_2:+62418552 None:intergenic
ACCTCTTACCTGGAGGAATT+GGG 0.442515 8_2:-62422735 Msa1260420:CDS
CTGGCTCGTTATTCCAACCT+TGG 0.443215 8_2:+62419596 None:intergenic
TTCAAGCGGTTTCACTTTGT+GGG 0.447352 8_2:-62422569 Msa1260420:CDS
AGATGGCCTTGGATCTTGTT+CGG 0.448814 8_2:+62424918 None:intergenic
ATTTCGGTGCAAATTGAACT+TGG 0.449045 8_2:-62417963 Msa1260420:three_prime_UTR
CGCTCTGGCTCTAGAGTCAC+TGG 0.450006 8_2:-62417725 Msa1260420:three_prime_UTR
GGTATCCATAATGTAGAATC+TGG 0.451732 8_2:-62419066 Msa1260420:CDS
TCAGTTGAGCACCTCTTACC+TGG 0.452136 8_2:-62422745 Msa1260420:CDS
ATTACCTCTTTGAACATTCG+AGG 0.454838 8_2:+62420944 None:intergenic
ACAGGAAAGGAGAATAATGT+TGG 0.460228 8_2:-62422520 Msa1260420:CDS
GGTTGGGAAGAAATAGGACT+TGG 0.461704 8_2:+62418979 None:intergenic
ATGAAGCTGGTGTTGCTAAA+GGG 0.464217 8_2:+62422767 None:intergenic
TCTATCCACAAATGCTCACT+AGG 0.466076 8_2:+62418645 None:intergenic
GCTGTAAATTAGTAAACTCT+TGG 0.466747 8_2:-62417381 Msa1260420:three_prime_UTR
GCTATACTTGGACAGGTTGT+TGG 0.468086 8_2:-62418039 Msa1260420:three_prime_UTR
GGATCAACCTAGCATGTTGT+TGG 0.470465 8_2:-62418224 Msa1260420:three_prime_UTR
ACCATCTCCCCAACAACTCA+TGG 0.472821 8_2:-62419090 Msa1260420:CDS
TGAAGTTAAGAAATTTGGTT+GGG 0.473775 8_2:+62418963 None:intergenic
ACTTGATACAATAGGACAAC+TGG 0.473797 8_2:-62421068 Msa1260420:intron
TGATTATCGAACGACCTTTG+TGG 0.474042 8_2:-62425563 Msa1260420:five_prime_UTR
TCCCAATTCCTCCAGGTAAG+AGG 0.482696 8_2:+62422734 None:intergenic
GAGATTAGAAAGGGAAAGAC+AGG 0.483551 8_2:-62422538 Msa1260420:CDS
AGTGAAGTAAGTCCAAGTTT+AGG 0.484101 8_2:+62418471 None:intergenic
GCTAATGGCACCTCCTTCAA+TGG 0.484672 8_2:+62418798 None:intergenic
CTAGTGGCCGCAAGAAATCA+TGG 0.484886 8_2:+62422863 None:intergenic
CTAAATATATATAATTATAG+AGG 0.485547 8_2:-62417448 Msa1260420:three_prime_UTR
CAGGAAAGGAGAATAATGTT+GGG 0.486926 8_2:-62422519 Msa1260420:CDS
TTTGAAGCAAACAGCAATGT+TGG 0.487282 8_2:+62419132 None:intergenic
GGAAGAGTCTGAGATTAGAA+AGG 0.487727 8_2:-62422548 Msa1260420:CDS
CGAGATTGAAAACTTTCTGC+TGG 0.488725 8_2:+62419183 None:intergenic
TTTCAATCTCGTGGCGCAAA+TGG 0.497489 8_2:-62419171 Msa1260420:CDS
GAGAAAGAGCTCACCATTGA+AGG 0.497721 8_2:-62418811 Msa1260420:CDS
TCATCATTTCCATAAAACTC+TGG 0.498591 8_2:+62421036 None:intergenic
ATGAAGGTTCATTCCAAGGT+TGG 0.500331 8_2:-62419609 Msa1260420:CDS
GGAGATGTGGCAGGTGATTG+TGG 0.501550 8_2:-62418618 Msa1260420:three_prime_UTR
TGCTGGATTATTATCCTGCA+TGG 0.504277 8_2:-62417555 Msa1260420:three_prime_UTR
GTTAGGTCAGTGGACATTGA+AGG 0.508165 8_2:-62421262 Msa1260420:CDS
ACTCAACAGAGAAAGTTAAA+GGG 0.511879 8_2:-62426114 Msa1260420:five_prime_UTR
GCCTTGTTTGTTATTCCAGA+CGG 0.512631 8_2:+62419006 None:intergenic
TAAATGTGCTATACTTGGAC+AGG 0.513308 8_2:-62418046 Msa1260420:three_prime_UTR
GATGAAGCTGGTGTTGCTAA+AGG 0.513947 8_2:+62422766 None:intergenic
GCGTGAATAATAATAATCAA+AGG 0.514207 8_2:-62422684 Msa1260420:CDS
CCCATGAGTTGTTGGGGAGA+TGG 0.517548 8_2:+62419089 None:intergenic
CGTGAATAATAATAATCAAA+GGG 0.518006 8_2:-62422683 Msa1260420:CDS
GAATTTCGAGAAAAGAAAAT+GGG 0.518677 8_2:+62418144 None:intergenic
ATGTAAACTATAACATAAAG+AGG 0.519364 8_2:+62418341 None:intergenic
TTGAAGTTAAGAAATTTGGT+TGG 0.519525 8_2:+62418962 None:intergenic
GCAGCGAAAGATGAGGTCTT+GGG 0.520455 8_2:+62426086 None:intergenic
GTACACACTTGATATGCTAA+TGG 0.523913 8_2:+62418783 None:intergenic
AAGACAATAGATCATCCGTC+TGG 0.528087 8_2:-62419021 Msa1260420:CDS
AATGCCAATGTGTGTTTCCA+AGG 0.530445 8_2:-62417910 Msa1260420:intron
TTGGAAACACACATTGGCAT+TGG 0.530708 8_2:+62417912 None:intergenic
TTCAGGAGTGGATTTATCAC+AGG 0.531531 8_2:-62417991 Msa1260420:three_prime_UTR
AATCAAAGGAAGATGCGCTC+TGG 0.532036 8_2:-62417740 Msa1260420:three_prime_UTR
TTTATTAGCTATCACAATGA+GGG 0.532937 8_2:+62417260 None:intergenic
TTCTCTGGTACGTAATTCAA+CGG 0.533332 8_2:+62425174 None:intergenic
TTCCACACAGTGATCAAAAG+AGG 0.537014 8_2:-62419781 Msa1260420:CDS
AAGATCCTTCTAAGAATCAA+AGG 0.539351 8_2:-62417754 Msa1260420:three_prime_UTR
CCATCTCCCCAACAACTCAT+GGG 0.540580 8_2:-62419089 Msa1260420:CDS
GAGAAGGTTCATAAGTATGA+AGG 0.541707 8_2:-62419625 Msa1260420:CDS
GAAGAAGCAAAATTAATGAC+AGG 0.542133 8_2:-62420337 Msa1260420:intron
GTGGACATCTATTCAGAGAA+AGG 0.545303 8_2:+62418447 None:intergenic
GATGAAGAGCTAGAAAATGA+AGG 0.546934 8_2:-62420990 Msa1260420:CDS
GCAAACAGCAATGTTGGAGA+TGG 0.547592 8_2:+62419138 None:intergenic
TATAAATAATGAGCTACGGA+AGG 0.548409 8_2:+62417291 None:intergenic
CTAGGTTGATCCATATATTG+TGG 0.548446 8_2:+62418235 None:intergenic
GAAGAGTCTGAGATTAGAAA+GGG 0.549063 8_2:-62422547 Msa1260420:CDS
GATTCTGTGAAATTTCTAGC+AGG 0.550131 8_2:-62425620 Msa1260420:five_prime_UTR
TCTCTTATTAGGTTGAAGAT+CGG 0.551105 8_2:+62425389 None:intergenic
AAGTATGAAGGTTCATTCCA+AGG 0.551145 8_2:-62419613 Msa1260420:CDS
AATCTCGTGGCGCAAATGGT+GGG 0.551190 8_2:-62419167 Msa1260420:CDS
TATACAGTACCTTGAGCAGA+TGG 0.553708 8_2:+62424901 None:intergenic
GGAAATGATGAAATCTGCAC+AGG 0.556382 8_2:-62421024 Msa1260420:CDS
TGCAGCTCACATACTTCAAG+CGG 0.558097 8_2:-62422583 Msa1260420:CDS
CTATCCACAAATGCTCACTA+GGG 0.558631 8_2:+62418646 None:intergenic
CAAAGCAGAGAAATAATGAC+AGG 0.558692 8_2:-62419206 Msa1260420:intron
AGCAACATGAATTGCACAAG+TGG 0.559497 8_2:+62418428 None:intergenic
GAACTAAGGGTGAGAGTGGA+CGG 0.560606 8_2:-62420422 Msa1260420:CDS
TGATTTCTTGCGGCCACTAG+AGG 0.563586 8_2:-62422860 Msa1260420:CDS
AATTGTTAGATGACTGTGGA+TGG 0.565285 8_2:+62418585 None:intergenic
AAATTATCTCTGAATTCTGA+AGG 0.565839 8_2:+62425306 None:intergenic
AGTTTACTAATTTACAGCAA+TGG 0.566532 8_2:+62417386 None:intergenic
ACCCAAATCGGAGGTTTAGG+TGG 0.566780 8_2:-62418940 Msa1260420:CDS
CTATAAGTCCCAATTCCTCC+AGG 0.567759 8_2:+62422727 None:intergenic
AGAAGCCAAATCCAGTGCCA+AGG 0.568313 8_2:-62422833 Msa1260420:CDS
AAAACAGCTTGTATCAGTAT+GGG 0.573845 8_2:+62417422 None:intergenic
TCAAGACCCATGATTTCTTG+CGG 0.575342 8_2:-62422870 Msa1260420:CDS
ATAGTCTGAGATTCTACTGA+AGG 0.581921 8_2:+62418859 None:intergenic
AGGCTATAAATAATGAGCTA+CGG 0.582243 8_2:+62417287 None:intergenic
TGCCTTGCAGAGTTCAGGAG+TGG 0.584050 8_2:-62418003 Msa1260420:three_prime_UTR
CACCGATGAGATTTCATCTG+TGG 0.584148 8_2:+62422804 None:intergenic
ACAGTCAATCTCATCCATGC+AGG 0.585678 8_2:+62417541 None:intergenic
AATAGAAGCAATCCAAGGAA+AGG 0.589019 8_2:+62417196 None:intergenic
ATCTGCACAGGATTGTGCCC+AGG 0.592606 8_2:-62421012 Msa1260420:CDS
GCACGTTCTTATGGAGCCGA+AGG 0.594158 8_2:-62425114 Msa1260420:intron
GCAGGATAATAATCCAGCAC+AGG 0.595198 8_2:+62417559 None:intergenic
TTGATTATTATTATTCACGC+AGG 0.597539 8_2:+62422687 None:intergenic
TTTCTTGCGGCCACTAGAGG+AGG 0.598604 8_2:-62422857 Msa1260420:CDS
ATCCACTCCTGAACTCTGCA+AGG 0.600178 8_2:+62418001 None:intergenic
GCAAGAAATCATGGGTCTTG+AGG 0.600334 8_2:+62422872 None:intergenic
AGGTGCTCAACTGATGAAGC+TGG 0.601853 8_2:+62422754 None:intergenic
AGGAGAACTAAGGGTGAGAG+TGG 0.602089 8_2:-62420426 Msa1260420:CDS
ATTGAATTGTTAGATGACTG+TGG 0.605394 8_2:+62418581 None:intergenic
TTAACTTCAACCCAAATCGG+AGG 0.605590 8_2:-62418949 Msa1260420:CDS
TGAAGCTGGTGTTGCTAAAG+GGG 0.607506 8_2:+62422768 None:intergenic
TTGGCTTCTACCTCCTCTAG+TGG 0.607953 8_2:+62422847 None:intergenic
TGAAGTATGTGAGCTGCAGT+TGG 0.607956 8_2:+62422588 None:intergenic
TATTCACGCAGGAATTAATG+TGG 0.608444 8_2:+62422698 None:intergenic
TAGAAAGGGAAAGACAGGAA+AGG 0.608538 8_2:-62422533 Msa1260420:CDS
GCTCCATAAGAACGTGCTTG+AGG 0.609314 8_2:+62425120 None:intergenic
TAGTGGCCGCAAGAAATCAT+GGG 0.609935 8_2:+62422864 None:intergenic
GATCCAAGGCCATCTGCTCA+AGG 0.611922 8_2:-62424910 Msa1260420:intron
TGAGGAAAGAATGAATGTAA+CGG 0.614056 8_2:+62417645 None:intergenic
TAATTATACAGGAGAACTAA+GGG 0.615249 8_2:-62420435 Msa1260420:intron
GTGGATAGAAATTGGAGATG+TGG 0.617637 8_2:-62418631 Msa1260420:three_prime_UTR
GCATTGGTATGTCTGGTCTG+AGG 0.617749 8_2:+62417928 None:intergenic
ATAGAAATTGGAGATGTGGC+AGG 0.617759 8_2:-62418627 Msa1260420:three_prime_UTR
ATATCAAGTGTGTACTCACA+AGG 0.619435 8_2:-62418775 Msa1260420:CDS
TGAATTGTTTGAATGGAACA+GGG 0.619907 8_2:+62418289 None:intergenic
AAAGAGCTCACCATTGAAGG+AGG 0.629369 8_2:-62418808 Msa1260420:CDS
CAACTGCCGAACAAGATCCA+AGG 0.629883 8_2:-62424924 Msa1260420:CDS
TATACCTTGGAAACACACAT+TGG 0.634078 8_2:+62417906 None:intergenic
ATAAATAATGAGCTACGGAA+GGG 0.638667 8_2:+62417292 None:intergenic
CATCTCCCCAACAACTCATG+GGG 0.638824 8_2:-62419088 Msa1260420:CDS
CACAGATGAAATCTCATCGG+TGG 0.642838 8_2:-62422803 Msa1260420:CDS
AGCCACAGATGAAATCTCAT+CGG 0.643022 8_2:-62422806 Msa1260420:CDS
TCCACACAGTGATCAAAAGA+GGG 0.643944 8_2:-62419780 Msa1260420:CDS
GCTATCACAATGAGGGTGTG+AGG 0.644440 8_2:+62417267 None:intergenic
ACAGCTTGTATCAGTATGGG+AGG 0.645446 8_2:+62417425 None:intergenic
GAATCCTCGAATGTTCAAAG+AGG 0.645829 8_2:-62420948 Msa1260420:intron
GGGGACAAACCCATTATAGG+AGG 0.647556 8_2:-62422499 Msa1260420:intron
TCTGTGCGGAAACAGGAGCA+GGG 0.649932 8_2:-62424987 Msa1260420:intron
ATCTGGCTTGAGCACAACAA+CGG 0.650337 8_2:-62419049 Msa1260420:CDS
TTAGCAATTGACTTCCACAA+AGG 0.655989 8_2:+62425549 None:intergenic
GAATTAATAGAAGCAATCCA+AGG 0.657987 8_2:+62417191 None:intergenic
GAGCACTGCAGCGAAAGATG+AGG 0.658597 8_2:+62426079 None:intergenic
CGAAAGATGAGGTCTTGGGT+CGG 0.660416 8_2:+62426090 None:intergenic
TATATATTCACCCAGCCATG+AGG 0.661374 8_2:-62418538 Msa1260420:three_prime_UTR
CTGCTGCTAAGTTAGGTCAG+TGG 0.667387 8_2:-62421272 Msa1260420:CDS
AGGAAAGGAGAATAATGTTG+GGG 0.670249 8_2:-62422518 Msa1260420:CDS
TATCCACAAATGCTCACTAG+GGG 0.675975 8_2:+62418647 None:intergenic
TCCGTCTGGAATAACAAACA+AGG 0.684989 8_2:-62419007 Msa1260420:CDS
TATCAAGTGTGTACTCACAA+GGG 0.699426 8_2:-62418774 Msa1260420:CDS
TGTGCATCAAGCAACTAGTG+CGG 0.714634 8_2:-62422629 Msa1260420:CDS
GTTGAGCACCTCTTACCTGG+AGG 0.717651 8_2:-62422742 Msa1260420:CDS
ATCTCCCCAACAACTCATGG+GGG 0.722606 8_2:-62419087 Msa1260420:CDS
GAAGCTGGTGTTGCTAAAGG+GGG 0.738031 8_2:+62422769 None:intergenic
GTGCGGAAACAGGAGCAGGG+AGG 0.747996 8_2:-62424984 Msa1260420:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAATAAAAAAACTATTTTC+AGG + chr8_2:62420183-62420202 None:intergenic 10.0%
!!! TTTTGTTTTCAAAATTATTT+CGG - chr8_2:62420398-62420417 Msa1260420:CDS 10.0%
!!! GATAATAAATAATTTTCATT+TGG + chr8_2:62421265-62421284 None:intergenic 10.0%
!!! GGATAATTTTTTAAAATAAT+GGG + chr8_2:62421669-62421688 None:intergenic 10.0%
!!! TGGATAATTTTTTAAAATAA+TGG + chr8_2:62421670-62421689 None:intergenic 10.0%
!! AAAATAAGATAAATAATTAC+AGG + chr8_2:62421699-62421718 None:intergenic 10.0%
!!! TATTTTTAACATTTTTTACT+TGG - chr8_2:62422221-62422240 Msa1260420:intron 10.0%
!! ATAATTGATAAAAATTATTG+AGG + chr8_2:62425747-62425766 None:intergenic 10.0%
!!! TAATTTTTATCAATTATTTG+GGG - chr8_2:62425750-62425769 Msa1260420:intron 10.0%
!!! TTTTAAAATTAATTTTTGGA+AGG - chr8_2:62425778-62425797 Msa1260420:intron 10.0%
!!! TTTAAAATTAATTTTTGGAA+GGG - chr8_2:62425779-62425798 Msa1260420:intron 10.0%
!! CTAAATATATATAATTATAG+AGG - chr8_2:62425923-62425942 Msa1260420:five_prime_UTR 10.0%
!!! ATTTTTTTTAACATTGATTT+TGG - chr8_2:62426028-62426047 Msa1260420:five_prime_UTR 10.0%
!! TGATTTGAATTAATATTGTT+TGG - chr8_2:62418341-62418360 Msa1260420:three_prime_UTR 15.0%
!! TATTATTATGCAAAATGATT+CGG - chr8_2:62418514-62418533 Msa1260420:three_prime_UTR 15.0%
!! TTATTTACAGTTGAATTATT+TGG + chr8_2:62418654-62418673 None:intergenic 15.0%
!! TTAATTAACAAAATTTCCTA+TGG - chr8_2:62418782-62418801 Msa1260420:CDS 15.0%
!! TTAAAACAATTGAAAGTTAA+TGG + chr8_2:62419447-62419466 None:intergenic 15.0%
!! TAGCTATTATTAGTTAATAA+TGG + chr8_2:62419572-62419591 None:intergenic 15.0%
!! TAGCTATTATTAGTTAATAA+TGG + chr8_2:62419572-62419591 None:intergenic 15.0%
!!! TTTTCATTTTTGGTTAAATA+CGG + chr8_2:62420327-62420346 None:intergenic 15.0%
!! TATTTAAATGGAGAATAATA+AGG - chr8_2:62420993-62421012 Msa1260420:CDS 15.0%
!! ATTGAAATAAAACTTAAAAG+AGG + chr8_2:62422495-62422514 None:intergenic 15.0%
!! GAATTATTTACTAATTATAC+AGG - chr8_2:62422925-62422944 Msa1260420:intron 15.0%
!! AAGGGAAAAAAAAAAAAAAA+AGG - chr8_2:62423306-62423325 Msa1260420:intron 15.0%
!! TTTATTAGATTTATGGTTTA+TGG - chr8_2:62423383-62423402 Msa1260420:intron 15.0%
!! TTATTAGATTTATGGTTTAT+GGG - chr8_2:62423384-62423403 Msa1260420:intron 15.0%
!! GTTTAATCTAAATTATTTGT+AGG - chr8_2:62423697-62423716 Msa1260420:intron 15.0%
!! TCATGTTTATAAAGAAATAA+AGG + chr8_2:62423978-62423997 None:intergenic 15.0%
!! AATTTAAATCCATTAACAAT+AGG + chr8_2:62424102-62424121 None:intergenic 15.0%
!! GAATATATAAATACATTAGT+AGG + chr8_2:62424822-62424841 None:intergenic 15.0%
!! ATAAATATTTCCACAATATA+TGG - chr8_2:62425126-62425145 Msa1260420:CDS 15.0%
!! AAATGATAAATGTTGTAATT+AGG - chr8_2:62425254-62425273 Msa1260420:intron 15.0%
!! ACAAATTAGATAATAATACA+TGG + chr8_2:62425573-62425592 None:intergenic 15.0%
!!! TTAAAATTAATTTTTGGAAG+GGG - chr8_2:62425780-62425799 Msa1260420:intron 15.0%
!!! TTCAATTTTTTGTTTCTTAG+TGG - chr8_2:62417506-62417525 Msa1260420:three_prime_UTR 20.0%
!! AATAAAATCATAACTACCTT+CGG + chr8_2:62418276-62418295 None:intergenic 20.0%
!! AGTATAAAAATTCTACATCA+CGG - chr8_2:62418617-62418636 Msa1260420:three_prime_UTR 20.0%
!! TCTCTTATAAAATCTTAATC+TGG + chr8_2:62419031-62419050 None:intergenic 20.0%
!!! GAATTCAAATTTTCTTTGTA+AGG + chr8_2:62419184-62419203 None:intergenic 20.0%
!! AATTTCTTTCAATTTAACCA+AGG + chr8_2:62419210-62419229 None:intergenic 20.0%
!! CAAGATCTTTATATTCTTTA+AGG + chr8_2:62419365-62419384 None:intergenic 20.0%
!! CTTAAAGAATATAAAGATCT+TGG - chr8_2:62419363-62419382 Msa1260420:intron 20.0%
!! ATATAGTAATACCATTATAC+TGG + chr8_2:62419411-62419430 None:intergenic 20.0%
!!! TAGTTAATAATGGAAAAATG+AGG + chr8_2:62419562-62419581 None:intergenic 20.0%
!!! TAGTTAATAATGGAAAAATG+AGG + chr8_2:62419562-62419581 None:intergenic 20.0%
!! AAAATAACAAACATGATTTG+AGG - chr8_2:62419835-62419854 Msa1260420:intron 20.0%
!!! AGTTTTCAAAACAATTTCTT+AGG + chr8_2:62420224-62420243 None:intergenic 20.0%
!!! TAAGAAATTGTTTTGAAAAC+TGG - chr8_2:62420223-62420242 Msa1260420:intron 20.0%
!!! ATACATATCGTTTTCATTTT+TGG + chr8_2:62420337-62420356 None:intergenic 20.0%
!! CGTGAATAATAATAATCAAA+GGG - chr8_2:62420688-62420707 Msa1260420:intron 20.0%
!! CATCTTCAAAAATTATTTCA+TGG + chr8_2:62420901-62420920 None:intergenic 20.0%
!!! AATTAAAGTGTTAGTATCTT+GGG + chr8_2:62421133-62421152 None:intergenic 20.0%
!!! AAATTAAAGTGTTAGTATCT+TGG + chr8_2:62421134-62421153 None:intergenic 20.0%
!! AATAGAGATAGAAAATGTTT+AGG - chr8_2:62421350-62421369 Msa1260420:intron 20.0%
!! ATAGAGATAGAAAATGTTTA+GGG - chr8_2:62421351-62421370 Msa1260420:intron 20.0%
!! ATGAAAATAACTGATTGAAA+GGG - chr8_2:62421610-62421629 Msa1260420:intron 20.0%
!! TAAATAATTACAGGTATGAT+TGG + chr8_2:62421690-62421709 None:intergenic 20.0%
!! CAAACATAAACAACTAAAAT+TGG + chr8_2:62421740-62421759 None:intergenic 20.0%
!!! ATTTGTTCCAATTATTTTCT+CGG - chr8_2:62421884-62421903 Msa1260420:intron 20.0%
!! AATTACATAACCATCTTAAA+AGG + chr8_2:62422255-62422274 None:intergenic 20.0%
!! AATTTGGCAACTATAATTAA+AGG + chr8_2:62422702-62422721 None:intergenic 20.0%
!!! AGTTTCATTCTTTTTTAGAA+AGG - chr8_2:62423287-62423306 Msa1260420:intron 20.0%
!!! GTTTCATTCTTTTTTAGAAA+GGG - chr8_2:62423288-62423307 Msa1260420:intron 20.0%
!! ACAACTTCAAAATAGTATAA+AGG + chr8_2:62424682-62424701 None:intergenic 20.0%
!! TAAGAAGCAAATTGAAATTA+TGG + chr8_2:62424991-62425010 None:intergenic 20.0%
!! ATGTAAACTATAACATAAAG+AGG + chr8_2:62425033-62425052 None:intergenic 20.0%
!! TGTATAATGAATTGTTTGAA+TGG + chr8_2:62425092-62425111 None:intergenic 20.0%
!! TATAAAAAGACTTTACAAGA+GGG + chr8_2:62425504-62425523 None:intergenic 20.0%
!! TTATAAAAAGACTTTACAAG+AGG + chr8_2:62425505-62425524 None:intergenic 20.0%
!!! ATGATGCATATTATTTTGTT+GGG + chr8_2:62425895-62425914 None:intergenic 20.0%
!!! AATGATGCATATTATTTTGT+TGG + chr8_2:62425896-62425915 None:intergenic 20.0%
!!! TTTTTTAACATTGATTTTGG+TGG - chr8_2:62426031-62426050 Msa1260420:five_prime_UTR 20.0%
! CAATCACTCAATTATCATTA+CGG - chr8_2:62417468-62417487 Msa1260420:three_prime_UTR 25.0%
! AAACTCGAATTAGCATAATT+CGG + chr8_2:62417637-62417656 None:intergenic 25.0%
! TCAACCTAATAAGAGAATTA+CGG - chr8_2:62417989-62418008 Msa1260420:three_prime_UTR 25.0%
! ATTACGGTTTCTACTAAATT+CGG - chr8_2:62418005-62418024 Msa1260420:three_prime_UTR 25.0%
! AAATTATCTCTGAATTCTGA+AGG + chr8_2:62418068-62418087 None:intergenic 25.0%
! AAATTATCTCTGAATTCTGA+AGG + chr8_2:62418068-62418087 None:intergenic 25.0%
!!! TTCAACGGAATTTTGAAATT+CGG + chr8_2:62418185-62418204 None:intergenic 25.0%
!!! AATTGAGATTCAAGTTTTGA+TGG - chr8_2:62418223-62418242 Msa1260420:three_prime_UTR 25.0%
! ATTAACAAAATTTCCTATGG+TGG - chr8_2:62418785-62418804 Msa1260420:CDS 25.0%
! GAAAATTTGAATTCAAACCT+TGG - chr8_2:62419190-62419209 Msa1260420:CDS 25.0%
!!! TTTACCACTTTTTGCATTTT+AGG - chr8_2:62419290-62419309 Msa1260420:intron 25.0%
! ATTTCCTAAAATGCAAAAAG+TGG + chr8_2:62419297-62419316 None:intergenic 25.0%
!!! AGATCTTGGTGTTTTAATTT+TGG - chr8_2:62419377-62419396 Msa1260420:intron 25.0%
!!! GATCTTGGTGTTTTAATTTT+GGG - chr8_2:62419378-62419397 Msa1260420:intron 25.0%
! AAATTATTTCGGTTGATTGA+AGG - chr8_2:62420409-62420428 Msa1260420:CDS 25.0%
! TTGATTATTATTATTCACGC+AGG + chr8_2:62420687-62420706 None:intergenic 25.0%
! GCGTGAATAATAATAATCAA+AGG - chr8_2:62420687-62420706 Msa1260420:intron 25.0%
!!! AGCAAGAAGCATTATTTAAA+TGG - chr8_2:62420981-62421000 Msa1260420:CDS 25.0%
!! ATGTTTAAAGCATAAAGTGT+AGG + chr8_2:62421041-62421060 None:intergenic 25.0%
!! ATTAAAGTGTTAGTATCTTG+GGG + chr8_2:62421132-62421151 None:intergenic 25.0%
! ATGAAATCATAAGAAAATGC+AGG + chr8_2:62421386-62421405 None:intergenic 25.0%
! CATGAAAATAACTGATTGAA+AGG - chr8_2:62421609-62421628 Msa1260420:intron 25.0%
! ATAAACAACTAAAATTGGCA+AGG + chr8_2:62421735-62421754 None:intergenic 25.0%
!! CGTTAATTAGTTAGATTTTG+AGG - chr8_2:62421977-62421996 Msa1260420:intron 25.0%
!!! ATCATTTTAACTTTGTGATG+AGG - chr8_2:62422649-62422668 Msa1260420:CDS 25.0%
!!! TCATTTTAACTTTGTGATGA+GGG - chr8_2:62422650-62422669 Msa1260420:CDS 25.0%
!!! GTGGTTTTAATATTATGTCT+CGG - chr8_2:62422803-62422822 Msa1260420:CDS 25.0%
! TAATTATACAGGAGAACTAA+GGG - chr8_2:62422936-62422955 Msa1260420:intron 25.0%
!!! TTTCCTAAAAGCCATTTTTA+GGG + chr8_2:62423336-62423355 None:intergenic 25.0%
!!! TTTTCCTAAAAGCCATTTTT+AGG + chr8_2:62423337-62423356 None:intergenic 25.0%
! TAACAATGATTCCAATTAAG+TGG - chr8_2:62423358-62423377 Msa1260420:intron 25.0%
! TCTAATAAAGTCCACTTAAT+TGG + chr8_2:62423372-62423391 None:intergenic 25.0%
!! AGTGGACTTTATTAGATTTA+TGG - chr8_2:62423376-62423395 Msa1260420:intron 25.0%
! CAAATAAAATCAGGTAATGA+TGG + chr8_2:62423507-62423526 None:intergenic 25.0%
! GATTATGAGCAAATAAAATC+AGG + chr8_2:62423516-62423535 None:intergenic 25.0%
! AACATTTGAATCAAACATGT+AGG - chr8_2:62423545-62423564 Msa1260420:intron 25.0%
! TGAATTTACCTCTAACAAAA+AGG + chr8_2:62423626-62423645 None:intergenic 25.0%
! TTGTTAGAGGTAAATTCATA+CGG - chr8_2:62423628-62423647 Msa1260420:intron 25.0%
! CAAAATAATAGCTTCATTGA+TGG - chr8_2:62423862-62423881 Msa1260420:intron 25.0%
! TTCTTTATAAACATGATCAG+AGG - chr8_2:62423982-62424001 Msa1260420:intron 25.0%
! TCTTTATAAACATGATCAGA+GGG - chr8_2:62423983-62424002 Msa1260420:intron 25.0%
!! GAAAAATGTGAATCAGTTTT+TGG + chr8_2:62424141-62424160 None:intergenic 25.0%
! TGAAGTTAAGAAATTTGGTT+GGG + chr8_2:62424411-62424430 None:intergenic 25.0%
! TTGAAGTTAAGAAATTTGGT+TGG + chr8_2:62424412-62424431 None:intergenic 25.0%
!!! ATACTATTTTGAAGTTGTGT+TGG - chr8_2:62424684-62424703 Msa1260420:intron 25.0%
!!! AAACAGTTTTTTAATCCTCA+TGG + chr8_2:62424851-62424870 None:intergenic 25.0%
! GAATTTCGAGAAAAGAAAAT+GGG + chr8_2:62425230-62425249 None:intergenic 25.0%
! AGAATTTCGAGAAAAGAAAA+TGG + chr8_2:62425231-62425250 None:intergenic 25.0%
! AATGCTAACAAAAACCAATT+TGG + chr8_2:62425283-62425302 None:intergenic 25.0%
! TAATACATGGTTTCATAATG+TGG + chr8_2:62425560-62425579 None:intergenic 25.0%
!!! TGATGCATATTATTTTGTTG+GGG + chr8_2:62425894-62425913 None:intergenic 25.0%
! AGTTTACTAATTTACAGCAA+TGG + chr8_2:62425988-62426007 None:intergenic 25.0%
! TTTATTAGCTATCACAATGA+GGG + chr8_2:62426114-62426133 None:intergenic 25.0%
!! TTTTATTAGCTATCACAATG+AGG + chr8_2:62426115-62426134 None:intergenic 25.0%
!!! AATCTTGAAAAGTATCTCAT+AGG + chr8_2:62426144-62426163 None:intergenic 25.0%
AACTCAACAGAGAAAGTTAA+AGG - chr8_2:62417256-62417275 Msa1260420:three_prime_UTR 30.0%
ACTCAACAGAGAAAGTTAAA+GGG - chr8_2:62417257-62417276 Msa1260420:three_prime_UTR 30.0%
AGTGATTATAAGAAAAAGCG+CGG - chr8_2:62417350-62417369 Msa1260420:three_prime_UTR 30.0%
!! TCTCTTATTAGGTTGAAGAT+CGG + chr8_2:62417985-62418004 None:intergenic 30.0%
GAAACCGTAATTCTCTTATT+AGG + chr8_2:62417996-62418015 None:intergenic 30.0%
! TGAATCTCAATTTTCTTCTC+TGG + chr8_2:62418215-62418234 None:intergenic 30.0%
!!! TTTTCTGAAACTTTTCTGTG+CGG - chr8_2:62418370-62418389 Msa1260420:three_prime_UTR 30.0%
TCTATTTAATCACAGGATCT+GGG - chr8_2:62418711-62418730 Msa1260420:three_prime_UTR 30.0%
CCATTTGATGTTAAATCCTT+CGG + chr8_2:62418814-62418833 None:intergenic 30.0%
AACTACAAGTCCATCAAAAT+GGG + chr8_2:62418903-62418922 None:intergenic 30.0%
! TTGATTTGACATTTCACATC+AGG - chr8_2:62418921-62418940 Msa1260420:CDS 30.0%
AATGAGGAGAATGAAAAAAG+TGG + chr8_2:62419546-62419565 None:intergenic 30.0%
TGACATGTAAGTGCATTAAA+TGG + chr8_2:62420276-62420295 None:intergenic 30.0%
TAAACATCCCATAGAATTTG+AGG - chr8_2:62421054-62421073 Msa1260420:CDS 30.0%
GATTTGTCCTCAAATTCTAT+GGG + chr8_2:62421064-62421083 None:intergenic 30.0%
! TGATTTGTCCTCAAATTCTA+TGG + chr8_2:62421065-62421084 None:intergenic 30.0%
ACTAACCCTTGAAAAACATA+AGG - chr8_2:62421223-62421242 Msa1260420:CDS 30.0%
!! TCATTTGGTTTGCTATTATC+CGG + chr8_2:62421250-62421269 None:intergenic 30.0%
ATGATTTCATATAACGTGCA+TGG - chr8_2:62421396-62421415 Msa1260420:intron 30.0%
!!! TTAGTTTTTTCTTTCGCCAA+TGG - chr8_2:62421565-62421584 Msa1260420:intron 30.0%
GGATGAAAGTCATCTTAATT+CGG - chr8_2:62421792-62421811 Msa1260420:intron 30.0%
CAATTGTATAGTATTTGCGA+CGG - chr8_2:62422039-62422058 Msa1260420:intron 30.0%
TTTCACAGCACTTTATTATG+TGG - chr8_2:62422070-62422089 Msa1260420:intron 30.0%
! TCGTTTTCTAACAATCATCA+TGG - chr8_2:62422146-62422165 Msa1260420:intron 30.0%
!! GGAATAGTTTCCTTTTAAGA+TGG - chr8_2:62422242-62422261 Msa1260420:intron 30.0%
! CTTTTTGCACTTGATACAAT+AGG - chr8_2:62422295-62422314 Msa1260420:intron 30.0%
TCATCATTTCCATAAAACTC+TGG + chr8_2:62422338-62422357 None:intergenic 30.0%
TAATATCTCCTTGTTGAGAA+AGG - chr8_2:62422453-62422472 Msa1260420:intron 30.0%
TTAGTCAGATCAATGAAAAG+GGG + chr8_2:62422769-62422788 None:intergenic 30.0%
GTTAGTCAGATCAATGAAAA+GGG + chr8_2:62422770-62422789 None:intergenic 30.0%
AGTTAGTCAGATCAATGAAA+AGG + chr8_2:62422771-62422790 None:intergenic 30.0%
! ACTAACTAGTGTTTTGTAAG+TGG - chr8_2:62422784-62422803 Msa1260420:CDS 30.0%
! TTGTTCGAAAAGATTTTACG+AGG - chr8_2:62422891-62422910 Msa1260420:intron 30.0%
CTAATTATACAGGAGAACTA+AGG - chr8_2:62422935-62422954 Msa1260420:intron 30.0%
GAAGAAGCAAAATTAATGAC+AGG - chr8_2:62423034-62423053 Msa1260420:intron 30.0%
!! GTTAGTCTTAGCTACTAATA+TGG - chr8_2:62423056-62423075 Msa1260420:intron 30.0%
GCAGTTCATAACTAAGAAAA+GGG + chr8_2:62423148-62423167 None:intergenic 30.0%
TGCAGTTCATAACTAAGAAA+AGG + chr8_2:62423149-62423168 None:intergenic 30.0%
! AAAAAGGTGTACCCTAAAAA+TGG - chr8_2:62423322-62423341 Msa1260420:intron 30.0%
!!! CATTCACTTTTTACAAGAGA+AGG - chr8_2:62423730-62423749 Msa1260420:intron 30.0%
AATCTTTCACAGCTTAAGAT+AGG + chr8_2:62423834-62423853 None:intergenic 30.0%
TTTCTCATAAAATGATCTGG+AGG + chr8_2:62423905-62423924 None:intergenic 30.0%
ACGTTTCTCATAAAATGATC+TGG + chr8_2:62423908-62423927 None:intergenic 30.0%
CAATCAAAACTATTAGGTCT+AGG + chr8_2:62423949-62423968 None:intergenic 30.0%
!!! ACCTAATAGTTTTGATTGTC+TGG - chr8_2:62423951-62423970 Msa1260420:intron 30.0%
ACCAGACAATCAAAACTATT+AGG + chr8_2:62423955-62423974 None:intergenic 30.0%
ATCACATAGCCTATTGTTAA+TGG - chr8_2:62424090-62424109 Msa1260420:intron 30.0%
!! AATGTGAATCAGTTTTTGGA+TGG + chr8_2:62424137-62424156 None:intergenic 30.0%
AAATTTGGTTGGGAAGAAAT+AGG + chr8_2:62424401-62424420 None:intergenic 30.0%
! TGGGTTGAAGTTAAGAAATT+TGG + chr8_2:62424416-62424435 None:intergenic 30.0%
TTCTTAACTTCAACCCAAAT+CGG - chr8_2:62424419-62424438 Msa1260420:intron 30.0%
!! TTCTACTGAAGGTTGATAAT+TGG + chr8_2:62424504-62424523 None:intergenic 30.0%
ATTGAATTGTTAGATGACTG+TGG + chr8_2:62424793-62424812 None:intergenic 30.0%
TGAATTGTTTGAATGGAACA+GGG + chr8_2:62425085-62425104 None:intergenic 30.0%
ATGAATTGTTTGAATGGAAC+AGG + chr8_2:62425086-62425105 None:intergenic 30.0%
TTGTAATTAGGATGCCAAAT+TGG - chr8_2:62425266-62425285 Msa1260420:intron 30.0%
CAAAGTAAATGTGCTATACT+TGG - chr8_2:62425320-62425339 Msa1260420:five_prime_UTR 30.0%
CAATTTGAGCAAATATACCT+TGG + chr8_2:62425481-62425500 None:intergenic 30.0%
! AAGATCCTTCTAAGAATCAA+AGG - chr8_2:62425617-62425636 Msa1260420:five_prime_UTR 30.0%
ATCTTCCTTTGATTCTTAGA+AGG + chr8_2:62425625-62425644 None:intergenic 30.0%
TGAGGAAAGAATGAATGTAA+CGG + chr8_2:62425729-62425748 None:intergenic 30.0%
!! ATGTAGTGTCTTAGTTTGTT+GGG - chr8_2:62425855-62425874 Msa1260420:intron 30.0%
!! ATGCATATTATTTTGTTGGG+GGG + chr8_2:62425892-62425911 None:intergenic 30.0%
!! GATGCATATTATTTTGTTGG+GGG + chr8_2:62425893-62425912 None:intergenic 30.0%
AAAACAGCTTGTATCAGTAT+GGG + chr8_2:62425952-62425971 None:intergenic 30.0%
AAAAACAGCTTGTATCAGTA+TGG + chr8_2:62425953-62425972 None:intergenic 30.0%
GCTGTAAATTAGTAAACTCT+TGG - chr8_2:62425990-62426009 Msa1260420:five_prime_UTR 30.0%
ATAAATAATGAGCTACGGAA+GGG + chr8_2:62426082-62426101 None:intergenic 30.0%
TATAAATAATGAGCTACGGA+AGG + chr8_2:62426083-62426102 None:intergenic 30.0%
AGGCTATAAATAATGAGCTA+CGG + chr8_2:62426087-62426106 None:intergenic 30.0%
GAATTAATAGAAGCAATCCA+AGG + chr8_2:62426183-62426202 None:intergenic 30.0%
!! GATTCTGTGAAATTTCTAGC+AGG - chr8_2:62417751-62417770 Msa1260420:three_prime_UTR 35.0%
! TTAGCAATTGACTTCCACAA+AGG + chr8_2:62417825-62417844 None:intergenic 35.0%
AATCGCAAATCAAGAGCTTA+AGG + chr8_2:62417905-62417924 None:intergenic 35.0%
!! AAGCTCTTGATTTGCGATTA+AGG - chr8_2:62417906-62417925 Msa1260420:intron 35.0%
TTCTCTGGTACGTAATTCAA+CGG + chr8_2:62418200-62418219 None:intergenic 35.0%
CAGATCCTGTGATTAAATAG+AGG + chr8_2:62418712-62418731 None:intergenic 35.0%
CTCTATTTAATCACAGGATC+TGG - chr8_2:62418710-62418729 Msa1260420:three_prime_UTR 35.0%
CAGTCCATAAATAAGAAGCA+TGG + chr8_2:62418737-62418756 None:intergenic 35.0%
CCGAAGGATTTAACATCAAA+TGG - chr8_2:62418811-62418830 Msa1260420:CDS 35.0%
CAACTACAAGTCCATCAAAA+TGG + chr8_2:62418904-62418923 None:intergenic 35.0%
TAAGGAACTCTCACAGTATA+GGG + chr8_2:62419347-62419366 None:intergenic 35.0%
TTAAGGAACTCTCACAGTAT+AGG + chr8_2:62419348-62419367 None:intergenic 35.0%
TGGGCTAAAAACCAGTATAA+TGG - chr8_2:62419397-62419416 Msa1260420:intron 35.0%
TATTCACGCAGGAATTAATG+TGG + chr8_2:62420676-62420695 None:intergenic 35.0%
! GAAGAGTCTGAGATTAGAAA+GGG - chr8_2:62420824-62420843 Msa1260420:intron 35.0%
ACAGGAAAGGAGAATAATGT+TGG - chr8_2:62420851-62420870 Msa1260420:intron 35.0%
CAGGAAAGGAGAATAATGTT+GGG - chr8_2:62420852-62420871 Msa1260420:intron 35.0%
AGGAAAGGAGAATAATGTTG+GGG - chr8_2:62420853-62420872 Msa1260420:intron 35.0%
TCATGGTTACCTCCTATAAT+GGG + chr8_2:62420884-62420903 None:intergenic 35.0%
TTCATGGTTACCTCCTATAA+TGG + chr8_2:62420885-62420904 None:intergenic 35.0%
AAAGTGTAGGCTGCTATAAT+GGG + chr8_2:62421028-62421047 None:intergenic 35.0%
TAAAGTGTAGGCTGCTATAA+TGG + chr8_2:62421029-62421048 None:intergenic 35.0%
! ACGGTTTTCTGGGTATTATT+AGG + chr8_2:62421501-62421520 None:intergenic 35.0%
! AGTAAAAGCTACGGTTTTCT+GGG + chr8_2:62421511-62421530 None:intergenic 35.0%
! TAGTAAAAGCTACGGTTTTC+TGG + chr8_2:62421512-62421531 None:intergenic 35.0%
! AAAACCGTAGCTTTTACTAC+TGG - chr8_2:62421513-62421532 Msa1260420:intron 35.0%
CATTCCAGTAGTAAAAGCTA+CGG + chr8_2:62421520-62421539 None:intergenic 35.0%
TTTCATGAATCGATTATGCG+AGG + chr8_2:62421596-62421615 None:intergenic 35.0%
ATTAAGATGACTTTCATCCG+TGG + chr8_2:62421791-62421810 None:intergenic 35.0%
AGAACGTCCGAGAAAATAAT+TGG + chr8_2:62421894-62421913 None:intergenic 35.0%
ACACATGAATGACACTAGAT+AGG - chr8_2:62421918-62421937 Msa1260420:intron 35.0%
CACATGAATGACACTAGATA+GGG - chr8_2:62421919-62421938 Msa1260420:intron 35.0%
ACTTGATACAATAGGACAAC+TGG - chr8_2:62422303-62422322 Msa1260420:intron 35.0%
! ACAGAAGAACCAGAGTTTTA+TGG - chr8_2:62422326-62422345 Msa1260420:intron 35.0%
!!! ATTTTCTAGCTCTTCATCCT+GGG + chr8_2:62422379-62422398 None:intergenic 35.0%
GATGAAGAGCTAGAAAATGA+AGG - chr8_2:62422381-62422400 Msa1260420:intron 35.0%
ATTACCTCTTTGAACATTCG+AGG + chr8_2:62422430-62422449 None:intergenic 35.0%
TTTGAGCATTTAACTCGTTG+TGG + chr8_2:62422845-62422864 None:intergenic 35.0%
ACAACGAGTTAAATGCTCAA+AGG - chr8_2:62422844-62422863 Msa1260420:CDS 35.0%
CAACGAGTTAAATGCTCAAA+GGG - chr8_2:62422845-62422864 Msa1260420:CDS 35.0%
!!! TGTTTTGATCTTGGTGTGTT+TGG + chr8_2:62422994-62423013 None:intergenic 35.0%
!!! GTTGCAGAATGTTTTGATCT+TGG + chr8_2:62423003-62423022 None:intergenic 35.0%
CAACTAACTCGTTAAGCATT+AGG + chr8_2:62423252-62423271 None:intergenic 35.0%
! GTACCCTAAAAATGGCTTTT+AGG - chr8_2:62423330-62423349 Msa1260420:intron 35.0%
!! CAAAGCATCCTTTTTGTTAG+AGG - chr8_2:62423615-62423634 Msa1260420:intron 35.0%
TAGAGGTAAATTCATACGGT+TGG - chr8_2:62423632-62423651 Msa1260420:intron 35.0%
GAGAAGGTTCATAAGTATGA+AGG - chr8_2:62423746-62423765 Msa1260420:intron 35.0%
AAGTATGAAGGTTCATTCCA+AGG - chr8_2:62423758-62423777 Msa1260420:intron 35.0%
! TTCAAGTTTGATGTCCTTGT+TGG - chr8_2:62424013-62424032 Msa1260420:intron 35.0%
!! AGATGCTTGTCTTGTTTAAG+TGG - chr8_2:62424053-62424072 Msa1260420:intron 35.0%
!! GATGCTTGTCTTGTTTAAGT+GGG - chr8_2:62424054-62424073 Msa1260420:intron 35.0%
CAAAGCAGAGAAATAATGAC+AGG - chr8_2:62424165-62424184 Msa1260420:intron 35.0%
! TTTGAAGCAAACAGCAATGT+TGG + chr8_2:62424242-62424261 None:intergenic 35.0%
!! AACATTGCTGTTTGCTTCAA+AGG - chr8_2:62424241-62424260 Msa1260420:intron 35.0%
GGTATCCATAATGTAGAATC+TGG - chr8_2:62424305-62424324 Msa1260420:intron 35.0%
TCAAGCCAGATTCTACATTA+TGG + chr8_2:62424313-62424332 None:intergenic 35.0%
! ATAGTCTGAGATTCTACTGA+AGG + chr8_2:62424515-62424534 None:intergenic 35.0%
! TTTCTCTTTCAGCTTTTCAC+TGG + chr8_2:62424546-62424565 None:intergenic 35.0%
GTACACACTTGATATGCTAA+TGG + chr8_2:62424591-62424610 None:intergenic 35.0%
ATATCAAGTGTGTACTCACA+AGG - chr8_2:62424596-62424615 Msa1260420:intron 35.0%
TATCAAGTGTGTACTCACAA+GGG - chr8_2:62424597-62424616 Msa1260420:intron 35.0%
AAGTTGTGTTGGACATGATA+TGG - chr8_2:62424695-62424714 Msa1260420:intron 35.0%
GAGCATTTGTGGATAGAAAT+TGG - chr8_2:62424732-62424751 Msa1260420:intron 35.0%
AATTGTTAGATGACTGTGGA+TGG + chr8_2:62424789-62424808 None:intergenic 35.0%
!!! GTTTTTTAATCCTCATGGCT+GGG + chr8_2:62424846-62424865 None:intergenic 35.0%
!!! AGTTTTTTAATCCTCATGGC+TGG + chr8_2:62424847-62424866 None:intergenic 35.0%
AGTGAAGTAAGTCCAAGTTT+AGG + chr8_2:62424903-62424922 None:intergenic 35.0%
!! CTAGGTTGATCCATATATTG+TGG + chr8_2:62425139-62425158 None:intergenic 35.0%
! AAGTTTTCCAACAACATGCT+AGG + chr8_2:62425157-62425176 None:intergenic 35.0%
TAAATGTGCTATACTTGGAC+AGG - chr8_2:62425325-62425344 Msa1260420:five_prime_UTR 35.0%
TTTATCACAGGCTAGCATTT+CGG - chr8_2:62425392-62425411 Msa1260420:five_prime_UTR 35.0%
! ATTTCGGTGCAAATTGAACT+TGG - chr8_2:62425408-62425427 Msa1260420:five_prime_UTR 35.0%
TATACCTTGGAAACACACAT+TGG + chr8_2:62425468-62425487 None:intergenic 35.0%
!! CATGTAGTGTCTTAGTTTGT+TGG - chr8_2:62425854-62425873 Msa1260420:intron 35.0%
TTGTTTACTTGACCTTTCCT+TGG - chr8_2:62426163-62426182 Msa1260420:five_prime_UTR 35.0%
AATAGAAGCAATCCAAGGAA+AGG + chr8_2:62426178-62426197 None:intergenic 35.0%
! CGCTCTGTGATTGAAGATTT+TGG - chr8_2:62417775-62417794 Msa1260420:intron 40.0%
TGATTATCGAACGACCTTTG+TGG - chr8_2:62417808-62417827 Msa1260420:intron 40.0%
! AAACTTTTCTGTGCGGAAAC+AGG - chr8_2:62418377-62418396 Msa1260420:three_prime_UTR 40.0%
TATACAGTACCTTGAGCAGA+TGG + chr8_2:62418473-62418492 None:intergenic 40.0%
GAAAAACATGGCAACAACAG+AGG + chr8_2:62418558-62418577 None:intergenic 40.0%
! CATGTTTTTCTCTGTGACGT+GGG - chr8_2:62418568-62418587 Msa1260420:three_prime_UTR 40.0%
! ATGTTTTTCTCTGTGACGTG+GGG - chr8_2:62418569-62418588 Msa1260420:three_prime_UTR 40.0%
ATTAAATAGAGGTCACGTGC+AGG + chr8_2:62418701-62418720 None:intergenic 40.0%
CGTGACCTCTATTTAATCAC+AGG - chr8_2:62418704-62418723 Msa1260420:three_prime_UTR 40.0%
! TGGGCCATGCTTCTTATTTA+TGG - chr8_2:62418730-62418749 Msa1260420:three_prime_UTR 40.0%
ATTTCACATCAGGCTCGATA+AGG - chr8_2:62418931-62418950 Msa1260420:CDS 40.0%
ATGTATGACATGCAGGTCAA+GGG + chr8_2:62420449-62420468 None:intergenic 40.0%
AATGTATGACATGCAGGTCA+AGG + chr8_2:62420450-62420469 None:intergenic 40.0%
GAAGGAAATGTATGACATGC+AGG + chr8_2:62420456-62420475 None:intergenic 40.0%
TGCTGTTCATGCATGAAAGA+AGG + chr8_2:62420474-62420493 None:intergenic 40.0%
TCAAGACCCATGATTTCTTG+CGG - chr8_2:62420501-62420520 Msa1260420:intron 40.0%
AGCCACAGATGAAATCTCAT+CGG - chr8_2:62420565-62420584 Msa1260420:intron 40.0%
!! ATGAAGCTGGTGTTGCTAAA+GGG + chr8_2:62420607-62420626 None:intergenic 40.0%
! GTGAAAAGTGATGATGCTTC+TGG + chr8_2:62420722-62420741 None:intergenic 40.0%
TTCAAGCGGTTTCACTTTGT+GGG - chr8_2:62420802-62420821 Msa1260420:intron 40.0%
! GGAAGAGTCTGAGATTAGAA+AGG - chr8_2:62420823-62420842 Msa1260420:intron 40.0%
GAGATTAGAAAGGGAAAGAC+AGG - chr8_2:62420833-62420852 Msa1260420:intron 40.0%
TAGAAAGGGAAAGACAGGAA+AGG - chr8_2:62420838-62420857 Msa1260420:intron 40.0%
AAGTGTTAGTATCTTGGGGT+TGG + chr8_2:62421128-62421147 None:intergenic 40.0%
!! CCGGTCCTTATGTTTTTCAA+GGG + chr8_2:62421231-62421250 None:intergenic 40.0%
CCCTTGAAAAACATAAGGAC+CGG - chr8_2:62421228-62421247 Msa1260420:CDS 40.0%
! TCCGGTCCTTATGTTTTTCA+AGG + chr8_2:62421232-62421251 None:intergenic 40.0%
! CGTAGCTTTTACTACTGGAA+TGG - chr8_2:62421518-62421537 Msa1260420:intron 40.0%
ATTATGCGAGGCAAAACCAT+TGG + chr8_2:62421584-62421603 None:intergenic 40.0%
! TATGCCTTTTGTCTACACCA+CGG - chr8_2:62421771-62421790 Msa1260420:intron 40.0%
GGAAATGATGAAATCTGCAC+AGG - chr8_2:62422347-62422366 Msa1260420:intron 40.0%
!!! CATTTTCTAGCTCTTCATCC+TGG + chr8_2:62422380-62422399 None:intergenic 40.0%
GAATCCTCGAATGTTCAAAG+AGG - chr8_2:62422423-62422442 Msa1260420:intron 40.0%
!!! TGGTGTGTTTGGCTTTTGAT+CGG + chr8_2:62422983-62423002 None:intergenic 40.0%
AGAGAAGAATTCCGTGCTAT+TGG - chr8_2:62423199-62423218 Msa1260420:intron 40.0%
! GAGAAGAATTCCGTGCTATT+GGG - chr8_2:62423200-62423219 Msa1260420:intron 40.0%
TTCCACACAGTGATCAAAAG+AGG - chr8_2:62423590-62423609 Msa1260420:intron 40.0%
TCCACACAGTGATCAAAAGA+GGG - chr8_2:62423591-62423610 Msa1260420:intron 40.0%
ATGAAGGTTCATTCCAAGGT+TGG - chr8_2:62423762-62423781 Msa1260420:intron 40.0%
! GAAAGTGTGGTATTTACCCA+TGG + chr8_2:62423812-62423831 None:intergenic 40.0%
CAGCTTAAGATAGGAAAGTG+TGG + chr8_2:62423825-62423844 None:intergenic 40.0%
TTGCTCAGTCAATTCCAACA+AGG + chr8_2:62424030-62424049 None:intergenic 40.0%
CGAGATTGAAAACTTTCTGC+TGG + chr8_2:62424191-62424210 None:intergenic 40.0%
! GCAGAAAGTTTTCAATCTCG+TGG - chr8_2:62424191-62424210 Msa1260420:intron 40.0%
CGGATGATCTATTGTCTTCA+TGG + chr8_2:62424348-62424367 None:intergenic 40.0%
AAGACAATAGATCATCCGTC+TGG - chr8_2:62424350-62424369 Msa1260420:intron 40.0%
! TCCGTCTGGAATAACAAACA+AGG - chr8_2:62424364-62424383 Msa1260420:intron 40.0%
!! GCCTTGTTTGTTATTCCAGA+CGG + chr8_2:62424368-62424387 None:intergenic 40.0%
TTAACTTCAACCCAAATCGG+AGG - chr8_2:62424422-62424441 Msa1260420:intron 40.0%
TATCCACAAATGCTCACTAG+GGG + chr8_2:62424727-62424746 None:intergenic 40.0%
CTATCCACAAATGCTCACTA+GGG + chr8_2:62424728-62424747 None:intergenic 40.0%
TCTATCCACAAATGCTCACT+AGG + chr8_2:62424729-62424748 None:intergenic 40.0%
GTGGATAGAAATTGGAGATG+TGG - chr8_2:62424740-62424759 Msa1260420:intron 40.0%
ATAGAAATTGGAGATGTGGC+AGG - chr8_2:62424744-62424763 Msa1260420:intron 40.0%
TATATATTCACCCAGCCATG+AGG - chr8_2:62424833-62424852 Msa1260420:intron 40.0%
TTCTGTTTGCAGCCTAAACT+TGG - chr8_2:62424888-62424907 Msa1260420:intron 40.0%
GTGGACATCTATTCAGAGAA+AGG + chr8_2:62424927-62424946 None:intergenic 40.0%
AGCAACATGAATTGCACAAG+TGG + chr8_2:62424946-62424965 None:intergenic 40.0%
! TTCAGGAGTGGATTTATCAC+AGG - chr8_2:62425380-62425399 Msa1260420:five_prime_UTR 40.0%
TTGGAAACACACATTGGCAT+TGG + chr8_2:62425462-62425481 None:intergenic 40.0%
AATGCCAATGTGTGTTTCCA+AGG - chr8_2:62425461-62425480 Msa1260420:five_prime_UTR 40.0%
! TTTGTCGATCATTTTCCCCT+AGG - chr8_2:62425588-62425607 Msa1260420:five_prime_UTR 40.0%
AAGGATCTTCATCATCCTAG+GGG + chr8_2:62425606-62425625 None:intergenic 40.0%
GAAGGATCTTCATCATCCTA+GGG + chr8_2:62425607-62425626 None:intergenic 40.0%
AGAAGGATCTTCATCATCCT+AGG + chr8_2:62425608-62425627 None:intergenic 40.0%
TGCTGGATTATTATCCTGCA+TGG - chr8_2:62425816-62425835 Msa1260420:intron 40.0%
!! CTTAGTTTGTTGGGATCCTT+AGG - chr8_2:62425864-62425883 Msa1260420:intron 40.0%
CGCACTCTTAACTCGTTGTT+TGG - chr8_2:62417538-62417557 Msa1260420:three_prime_UTR 45.0%
CTTCCTCAAGCACGTTCTTA+TGG - chr8_2:62418248-62418267 Msa1260420:three_prime_UTR 45.0%
! AGATGGCCTTGGATCTTGTT+CGG + chr8_2:62418456-62418475 None:intergenic 45.0%
CCACGTCACAGAGAAAAACA+TGG + chr8_2:62418570-62418589 None:intergenic 45.0%
! CCATGTTTTTCTCTGTGACG+TGG - chr8_2:62418567-62418586 Msa1260420:three_prime_UTR 45.0%
!! TTTCCTATGGTGGATTCCGA+AGG - chr8_2:62418795-62418814 Msa1260420:CDS 45.0%
AATCCTTCGGAATCCACCAT+AGG + chr8_2:62418801-62418820 None:intergenic 45.0%
ATGCTGCACACTTTATCGGA+CGG + chr8_2:62418865-62418884 None:intergenic 45.0%
CCTCATGCTGCACACTTTAT+CGG + chr8_2:62418869-62418888 None:intergenic 45.0%
TAAAGTGTGCAGCATGAGGA+TGG - chr8_2:62418870-62418889 Msa1260420:CDS 45.0%
ACATCAGGCTCGATAAGGAT+TGG - chr8_2:62418936-62418955 Msa1260420:CDS 45.0%
AAAACTACACCACACGCACA+CGG + chr8_2:62418967-62418986 None:intergenic 45.0%
TAGTTGCACGCAGAGTTACT+CGG + chr8_2:62419114-62419133 None:intergenic 45.0%
AGTAACTCTGCGTGCAACTA+TGG - chr8_2:62419114-62419133 Msa1260420:CDS 45.0%
AAGTGCATTAAATGGTGCGC+AGG + chr8_2:62420268-62420287 None:intergenic 45.0%
GCAAGAAATCATGGGTCTTG+AGG + chr8_2:62420502-62420521 None:intergenic 45.0%
TAGTGGCCGCAAGAAATCAT+GGG + chr8_2:62420510-62420529 None:intergenic 45.0%
! TTCTTCCTTGGCACTGGATT+TGG + chr8_2:62420546-62420565 None:intergenic 45.0%
TTCATCTGTGGCTTCTTCCT+TGG + chr8_2:62420558-62420577 None:intergenic 45.0%
CACCGATGAGATTTCATCTG+TGG + chr8_2:62420570-62420589 None:intergenic 45.0%
CACAGATGAAATCTCATCGG+TGG - chr8_2:62420568-62420587 Msa1260420:intron 45.0%
!! TGAAGCTGGTGTTGCTAAAG+GGG + chr8_2:62420606-62420625 None:intergenic 45.0%
!! GATGAAGCTGGTGTTGCTAA+AGG + chr8_2:62420608-62420627 None:intergenic 45.0%
ACCTCTTACCTGGAGGAATT+GGG - chr8_2:62420636-62420655 Msa1260420:intron 45.0%
CTATAAGTCCCAATTCCTCC+AGG + chr8_2:62420647-62420666 None:intergenic 45.0%
!! AGTGATGATGCTTCTGGCTT+TGG + chr8_2:62420716-62420735 None:intergenic 45.0%
TGTGCATCAAGCAACTAGTG+CGG - chr8_2:62420742-62420761 Msa1260420:intron 45.0%
TGAAGTATGTGAGCTGCAGT+TGG + chr8_2:62420786-62420805 None:intergenic 45.0%
TGCAGCTCACATACTTCAAG+CGG - chr8_2:62420788-62420807 Msa1260420:intron 45.0%
CTTCAAGCGGTTTCACTTTG+TGG - chr8_2:62420801-62420820 Msa1260420:intron 45.0%
GTTGGGGACAAACCCATTAT+AGG - chr8_2:62420869-62420888 Msa1260420:intron 45.0%
TCATCCGTGGTGTAGACAAA+AGG + chr8_2:62421778-62421797 None:intergenic 45.0%
!! TTGAAGCTGACTTGCTAGAC+AGG + chr8_2:62421957-62421976 None:intergenic 45.0%
GCAGATTCTGCTGCTAAGTT+AGG - chr8_2:62422092-62422111 Msa1260420:intron 45.0%
GTTAGGTCAGTGGACATTGA+AGG - chr8_2:62422109-62422128 Msa1260420:intron 45.0%
TGCTACTGCCTTTCTCAACA+AGG + chr8_2:62422464-62422483 None:intergenic 45.0%
! AATTCCGTGCTATTGGGACT+TGG - chr8_2:62423206-62423225 Msa1260420:intron 45.0%
! ATTCCGTGCTATTGGGACTT+GGG - chr8_2:62423207-62423226 Msa1260420:intron 45.0%
TTGGGAGTAGTGTAACTGGT+AGG - chr8_2:62423225-62423244 Msa1260420:intron 45.0%
AGTAAAAGGGTGGCTGAACA+AGG + chr8_2:62423414-62423433 None:intergenic 45.0%
! TTGTTCAGCCACCCTTTTAC+TGG - chr8_2:62423413-62423432 Msa1260420:intron 45.0%
! TGTTCAGCCACCCTTTTACT+GGG - chr8_2:62423414-62423433 Msa1260420:intron 45.0%
CAATCCCAACCCCAGTAAAA+GGG + chr8_2:62423427-62423446 None:intergenic 45.0%
ACAATCCCAACCCCAGTAAA+AGG + chr8_2:62423428-62423447 None:intergenic 45.0%
! TCCCTCTTTTGATCACTGTG+TGG + chr8_2:62423595-62423614 None:intergenic 45.0%
AGCCAGAAAAACTGATGCCA+TGG - chr8_2:62423792-62423811 Msa1260420:intron 45.0%
GCCAGAAAAACTGATGCCAT+GGG - chr8_2:62423793-62423812 Msa1260420:intron 45.0%
! ACCCATGGCATCAGTTTTTC+TGG + chr8_2:62423797-62423816 None:intergenic 45.0%
TTTCAATCTCGTGGCGCAAA+TGG - chr8_2:62424200-62424219 Msa1260420:intron 45.0%
GCAAACAGCAATGTTGGAGA+TGG + chr8_2:62424236-62424255 None:intergenic 45.0%
! ATCTGGCTTGAGCACAACAA+CGG - chr8_2:62424322-62424341 Msa1260420:intron 45.0%
GGTTGGGAAGAAATAGGACT+TGG + chr8_2:62424395-62424414 None:intergenic 45.0%
TCAACCCAAATCGGAGGTTT+AGG - chr8_2:62424428-62424447 Msa1260420:intron 45.0%
TCCACCTAAACCTCCGATTT+GGG + chr8_2:62424435-62424454 None:intergenic 45.0%
GAGAAAGAGCTCACCATTGA+AGG - chr8_2:62424560-62424579 Msa1260420:intron 45.0%
AAAGAGCTCACCATTGAAGG+AGG - chr8_2:62424563-62424582 Msa1260420:intron 45.0%
GGATCAACCTAGCATGTTGT+TGG - chr8_2:62425147-62425166 Msa1260420:exon 45.0%
GCTATACTTGGACAGGTTGT+TGG - chr8_2:62425332-62425351 Msa1260420:five_prime_UTR 45.0%
!! CACATTGGCATTGGTATGTC+TGG + chr8_2:62425453-62425472 None:intergenic 45.0%
AATCAAAGGAAGATGCGCTC+TGG - chr8_2:62425631-62425650 Msa1260420:intron 45.0%
! GGGGTATTTATTTCCTGTGC+TGG - chr8_2:62425799-62425818 Msa1260420:intron 45.0%
GCAGGATAATAATCCAGCAC+AGG + chr8_2:62425815-62425834 None:intergenic 45.0%
ACAGTCAATCTCATCCATGC+AGG + chr8_2:62425833-62425852 None:intergenic 45.0%
ACAGCTTGTATCAGTATGGG+AGG + chr8_2:62425949-62425968 None:intergenic 45.0%
!!! ATAATTTGTTTTATAATTTT+TGG - chr8_2:62418490-62418509 Msa1260420:three_prime_UTR 5.0%
!! TAATATTCTATAAATAAATA+TGG - chr8_2:62419590-62419609 Msa1260420:CDS 5.0%
!!! ATGTATTATTAATTAATTTT+AGG + chr8_2:62419639-62419658 None:intergenic 5.0%
!! TAATATTCTATAAATAAATA+TGG - chr8_2:62419590-62419609 Msa1260420:CDS 5.0%
!!! ATGTATTATTAATTAATTTT+AGG + chr8_2:62419639-62419658 None:intergenic 5.0%
!! ATAATACTAAAAAATAAATT+TGG + chr8_2:62422718-62422737 None:intergenic 5.0%
!!! AATAATTTTTATCAATTATT+TGG - chr8_2:62425748-62425767 Msa1260420:intron 5.0%
!!! ATAATTTTTATCAATTATTT+GGG - chr8_2:62425749-62425768 Msa1260420:intron 5.0%
!!! AACTTTTTAAAATTAATTTT+TGG - chr8_2:62425774-62425793 Msa1260420:intron 5.0%
CGAAAGATGAGGTCTTGGGT+CGG + chr8_2:62417284-62417303 None:intergenic 50.0%
GCAGCGAAAGATGAGGTCTT+GGG + chr8_2:62417288-62417307 None:intergenic 50.0%
TGCAGCGAAAGATGAGGTCT+TGG + chr8_2:62417289-62417308 None:intergenic 50.0%
GCTCCATAAGAACGTGCTTG+AGG + chr8_2:62418254-62418273 None:intergenic 50.0%
CAACTGCCGAACAAGATCCA+AGG - chr8_2:62418447-62418466 Msa1260420:three_prime_UTR 50.0%
CCGATAAAGTGTGCAGCATG+AGG - chr8_2:62418866-62418885 Msa1260420:CDS 50.0%
TGTGCAGCATGAGGATGGTA+GGG - chr8_2:62418875-62418894 Msa1260420:CDS 50.0%
AAACTACACCACACGCACAC+GGG + chr8_2:62418966-62418985 None:intergenic 50.0%
CTAGTGGCCGCAAGAAATCA+TGG + chr8_2:62420511-62420530 None:intergenic 50.0%
TGATTTCTTGCGGCCACTAG+AGG - chr8_2:62420511-62420530 Msa1260420:intron 50.0%
TTGGCTTCTACCTCCTCTAG+TGG + chr8_2:62420527-62420546 None:intergenic 50.0%
AGAAGCCAAATCCAGTGCCA+AGG - chr8_2:62420538-62420557 Msa1260420:intron 50.0%
!! GAAGCTGGTGTTGCTAAAGG+GGG + chr8_2:62420605-62420624 None:intergenic 50.0%
AGGTGCTCAACTGATGAAGC+TGG + chr8_2:62420620-62420639 None:intergenic 50.0%
TCAGTTGAGCACCTCTTACC+TGG - chr8_2:62420626-62420645 Msa1260420:intron 50.0%
CACCTCTTACCTGGAGGAAT+TGG - chr8_2:62420635-62420654 Msa1260420:intron 50.0%
TCCCAATTCCTCCAGGTAAG+AGG + chr8_2:62420640-62420659 None:intergenic 50.0%
GGGGACAAACCCATTATAGG+AGG - chr8_2:62420872-62420891 Msa1260420:intron 50.0%
AACGTGCATGGACACACACA+TGG - chr8_2:62421408-62421427 Msa1260420:intron 50.0%
GAATGACACTAGATAGGGCG+TGG - chr8_2:62421924-62421943 Msa1260420:intron 50.0%
CTGCTGCTAAGTTAGGTCAG+TGG - chr8_2:62422099-62422118 Msa1260420:intron 50.0%
AGGAGAACTAAGGGTGAGAG+TGG - chr8_2:62422945-62422964 Msa1260420:intron 50.0%
GAACTAAGGGTGAGAGTGGA+CGG - chr8_2:62422949-62422968 Msa1260420:intron 50.0%
GAGACACTTGCAAACTGCGA+TGG - chr8_2:62423105-62423124 Msa1260420:intron 50.0%
ACACTTGCAAACTGCGATGG+AGG - chr8_2:62423108-62423127 Msa1260420:intron 50.0%
ACTCCCAAGTCCCAATAGCA+CGG + chr8_2:62423213-62423232 None:intergenic 50.0%
GGACTTGGGAGTAGTGTAAC+TGG - chr8_2:62423221-62423240 Msa1260420:intron 50.0%
! GTTCAGCCACCCTTTTACTG+GGG - chr8_2:62423415-62423434 Msa1260420:intron 50.0%
TTACTGGGGTTGGGATTGTC+TGG - chr8_2:62423429-62423448 Msa1260420:intron 50.0%
! CTGGCTCGTTATTCCAACCT+TGG + chr8_2:62423778-62423797 None:intergenic 50.0%
AATCTCGTGGCGCAAATGGT+GGG - chr8_2:62424204-62424223 Msa1260420:intron 50.0%
ACCATCTCCCCAACAACTCA+TGG - chr8_2:62424281-62424300 Msa1260420:intron 50.0%
CCATCTCCCCAACAACTCAT+GGG - chr8_2:62424282-62424301 Msa1260420:intron 50.0%
CATCTCCCCAACAACTCATG+GGG - chr8_2:62424283-62424302 Msa1260420:intron 50.0%
ATCTCCCCAACAACTCATGG+GGG - chr8_2:62424284-62424303 Msa1260420:intron 50.0%
GATACCCCCATGAGTTGTTG+GGG + chr8_2:62424291-62424310 None:intergenic 50.0%
GGATACCCCCATGAGTTGTT+GGG + chr8_2:62424292-62424311 None:intergenic 50.0%
TGGATACCCCCATGAGTTGT+TGG + chr8_2:62424293-62424312 None:intergenic 50.0%
ACCCAAATCGGAGGTTTAGG+TGG - chr8_2:62424431-62424450 Msa1260420:intron 50.0%
CTCCACCTAAACCTCCGATT+TGG + chr8_2:62424436-62424455 None:intergenic 50.0%
GCTAATGGCACCTCCTTCAA+TGG + chr8_2:62424576-62424595 None:intergenic 50.0%
CATCCCCTAGTGAGCATTTG+TGG - chr8_2:62424721-62424740 Msa1260420:intron 50.0%
ACACATGCCTTGCAGAGTTC+AGG - chr8_2:62425363-62425382 Msa1260420:five_prime_UTR 50.0%
ATCCACTCCTGAACTCTGCA+AGG + chr8_2:62425373-62425392 None:intergenic 50.0%
! GCATTGGTATGTCTGGTCTG+AGG + chr8_2:62425446-62425465 None:intergenic 50.0%
! ATTTTGTTGGGGGGAGCCTA+AGG + chr8_2:62425883-62425902 None:intergenic 50.0%
! GCTATCACAATGAGGGTGTG+AGG + chr8_2:62426107-62426126 None:intergenic 50.0%
! GAGCACTGCAGCGAAAGATG+AGG + chr8_2:62417295-62417314 None:intergenic 55.0%
GCACGTTCTTATGGAGCCGA+AGG - chr8_2:62418257-62418276 Msa1260420:three_prime_UTR 55.0%
TTCTGTGCGGAAACAGGAGC+AGG - chr8_2:62418383-62418402 Msa1260420:three_prime_UTR 55.0%
TCTGTGCGGAAACAGGAGCA+GGG - chr8_2:62418384-62418403 Msa1260420:three_prime_UTR 55.0%
GATCCAAGGCCATCTGCTCA+AGG - chr8_2:62418461-62418480 Msa1260420:three_prime_UTR 55.0%
GTACCTTGAGCAGATGGCCT+TGG + chr8_2:62418467-62418486 None:intergenic 55.0%
TCTCTGTGACGTGGGGATCA+TGG - chr8_2:62418576-62418595 Msa1260420:three_prime_UTR 55.0%
GTGTGCAGCATGAGGATGGT+AGG - chr8_2:62418874-62418893 Msa1260420:CDS 55.0%
GTGCAGCATGAGGATGGTAG+GGG - chr8_2:62418876-62418895 Msa1260420:CDS 55.0%
TGCAGCATGAGGATGGTAGG+GGG - chr8_2:62418877-62418896 Msa1260420:CDS 55.0%
! TGGTAGGGGGCCCATTTTGA+TGG - chr8_2:62418890-62418909 Msa1260420:CDS 55.0%
TTTCTTGCGGCCACTAGAGG+AGG - chr8_2:62420514-62420533 Msa1260420:intron 55.0%
TGTGGCTTCTTCCTTGGCAC+TGG + chr8_2:62420552-62420571 None:intergenic 55.0%
GTTGAGCACCTCTTACCTGG+AGG - chr8_2:62420629-62420648 Msa1260420:intron 55.0%
TGACACTAGATAGGGCGTGG+CGG - chr8_2:62421927-62421946 Msa1260420:intron 55.0%
ATCTGCACAGGATTGTGCCC+AGG - chr8_2:62422359-62422378 Msa1260420:intron 55.0%
! AGCCACCCTTTTACTGGGGT+TGG - chr8_2:62423419-62423438 Msa1260420:intron 55.0%
! GCCACCCTTTTACTGGGGTT+GGG - chr8_2:62423420-62423439 Msa1260420:intron 55.0%
TCCCAACCCCAGTAAAAGGG+TGG + chr8_2:62423424-62423443 None:intergenic 55.0%
TTGGGATTGTCTGGCGGCTT+TGG - chr8_2:62423438-62423457 Msa1260420:intron 55.0%
CAATCTCGTGGCGCAAATGG+TGG - chr8_2:62424203-62424222 Msa1260420:intron 55.0%
CCCATGAGTTGTTGGGGAGA+TGG + chr8_2:62424285-62424304 None:intergenic 55.0%
GGAGATGTGGCAGGTGATTG+TGG - chr8_2:62424753-62424772 Msa1260420:intron 55.0%
TGCCTTGCAGAGTTCAGGAG+TGG - chr8_2:62425368-62425387 Msa1260420:five_prime_UTR 55.0%
TTGGCATTCCCGTGTGCGTG+TGG - chr8_2:62418955-62418974 Msa1260420:CDS 60.0%
CTGGGGTTGGGATTGTCTGG+CGG - chr8_2:62423432-62423451 Msa1260420:intron 60.0%
!! CGCTCTGGCTCTAGAGTCAC+TGG - chr8_2:62425646-62425665 Msa1260420:intron 60.0%
GTGCGGAAACAGGAGCAGGG+AGG - chr8_2:62418387-62418406 Msa1260420:three_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 62417182 62426211 62417182 ID=Msa1260420;Name=Msa1260420
chr8_2 mRNA 62417182 62426211 62417182 ID=Msa1260420-mRNA-1;Parent=Msa1260420;Name=Msa1260420-mRNA-1;_AED=0.04;_eAED=0.04;_QI=747|1|1|1|0.81|0.66|12|1462|491
chr8_2 exon 62417182 62417783 62417182 ID=Msa1260420-mRNA-1:exon:19814;Parent=Msa1260420-mRNA-1
chr8_2 exon 62417911 62419220 62417911 ID=Msa1260420-mRNA-1:exon:19813;Parent=Msa1260420-mRNA-1
chr8_2 exon 62419579 62419674 62419579 ID=Msa1260420-mRNA-1:exon:19812;Parent=Msa1260420-mRNA-1
chr8_2 exon 62419757 62419826 62419757 ID=Msa1260420-mRNA-1:exon:19811;Parent=Msa1260420-mRNA-1
chr8_2 exon 62420338 62420446 62420338 ID=Msa1260420-mRNA-1:exon:19810;Parent=Msa1260420-mRNA-1
chr8_2 exon 62420949 62421076 62420949 ID=Msa1260420-mRNA-1:exon:19809;Parent=Msa1260420-mRNA-1
chr8_2 exon 62421198 62421297 62421198 ID=Msa1260420-mRNA-1:exon:19808;Parent=Msa1260420-mRNA-1
chr8_2 exon 62422500 62422901 62422500 ID=Msa1260420-mRNA-1:exon:19807;Parent=Msa1260420-mRNA-1
chr8_2 exon 62424911 62424994 62424911 ID=Msa1260420-mRNA-1:exon:19806;Parent=Msa1260420-mRNA-1
chr8_2 exon 62425115 62425261 62425115 ID=Msa1260420-mRNA-1:exon:19805;Parent=Msa1260420-mRNA-1
chr8_2 exon 62425313 62425641 62425313 ID=Msa1260420-mRNA-1:exon:19804;Parent=Msa1260420-mRNA-1
chr8_2 exon 62425904 62426211 62425904 ID=Msa1260420-mRNA-1:exon:19803;Parent=Msa1260420-mRNA-1
chr8_2 five_prime_UTR 62425904 62426211 62425904 ID=Msa1260420-mRNA-1:five_prime_utr;Parent=Msa1260420-mRNA-1
chr8_2 five_prime_UTR 62425313 62425641 62425313 ID=Msa1260420-mRNA-1:five_prime_utr;Parent=Msa1260420-mRNA-1
chr8_2 five_prime_UTR 62425152 62425261 62425152 ID=Msa1260420-mRNA-1:five_prime_utr;Parent=Msa1260420-mRNA-1
chr8_2 CDS 62425115 62425151 62425115 ID=Msa1260420-mRNA-1:cds;Parent=Msa1260420-mRNA-1
chr8_2 CDS 62424911 62424994 62424911 ID=Msa1260420-mRNA-1:cds;Parent=Msa1260420-mRNA-1
chr8_2 CDS 62422500 62422901 62422500 ID=Msa1260420-mRNA-1:cds;Parent=Msa1260420-mRNA-1
chr8_2 CDS 62421198 62421297 62421198 ID=Msa1260420-mRNA-1:cds;Parent=Msa1260420-mRNA-1
chr8_2 CDS 62420949 62421076 62420949 ID=Msa1260420-mRNA-1:cds;Parent=Msa1260420-mRNA-1
chr8_2 CDS 62420338 62420446 62420338 ID=Msa1260420-mRNA-1:cds;Parent=Msa1260420-mRNA-1
chr8_2 CDS 62419757 62419826 62419757 ID=Msa1260420-mRNA-1:cds;Parent=Msa1260420-mRNA-1
chr8_2 CDS 62419579 62419674 62419579 ID=Msa1260420-mRNA-1:cds;Parent=Msa1260420-mRNA-1
chr8_2 CDS 62418771 62419220 62418771 ID=Msa1260420-mRNA-1:cds;Parent=Msa1260420-mRNA-1
chr8_2 three_prime_UTR 62417911 62418770 62417911 ID=Msa1260420-mRNA-1:three_prime_utr;Parent=Msa1260420-mRNA-1
chr8_2 three_prime_UTR 62417182 62417783 62417182 ID=Msa1260420-mRNA-1:three_prime_utr;Parent=Msa1260420-mRNA-1
Gene Sequence

>Msa1260420

ATGGAGCTTCCTCAAGCACGTTCTTATGGAGCCGAAGGAGCAGGGAGGAAATCGACGCATGATTTTCTGTCGCTATACAGTAATTCAACTGCCGAACAAGATCCAAGGCCATCTGCTCAAGCAAGTTTCCTCAAGACCCATGATTTCTTGCGGCCACTAGAGGAGGTAGAAGCCAAATCCAGTGCCAAGGAAGAAGCCACAGATGAAATCTCATCGGTGGTTGAGAAGCAACCCCCTTTAGCAACACCAGCTTCATCAGTTGAGCACCTCTTACCTGGAGGAATTGGGACTTATAGTATCAGCCACATTAATTCCTGCGTGAATAATAATAATCAAAGGGTTCCAAAGCCAGAAGCATCATCACTTTTCACTGTGCATCAAGCAACTAGTGCGGATAGAAATGATGACAACTCCAACTGCAGCTCACATACTTCAAGCGGTTTCACTTTGTGGGAAGAGTCTGAGATTAGAAAGGGAAAGACAGGAAAGGAGAATAATGTTGGGGACAAACCCATTATAGGAGATTCTGCTGCTAAGTTAGGTCAGTGGACATTGAAGGAGCGAACGTCTCAATCGTTTTCTAACAATCATCATGGCAGCTTCAACTCTCGCTCTTCATCTCAGACAACTGGACAGAAGAACCAGAGTTTTATGGAAATGATGAAATCTGCACAGGATTGTGCCCAGGATGAAGAGCTAGAAAATGAAGGAACGTTTTTTCTCAAGAGAGAATCCTCGAATGTTCAAAGAGGAGAACTAAGGGTGAGAGTGGACGGCAAGAGTACCGATCAAAAGCCAAACACACCAAGATCAAAACATTCTGCAACAGAGCAGCGAAGAAGAAGCAAAATTAATGACAGGTTTCAGATGCTACGAGAGCTTATTCCACACAGTGATCAAAAGAGGGACAAAGCATCCTTTTTGTTAGAGGTCATTGAGTACATTCACTTTTTACAAGAGAAGGTTCATAAGTATGAAGGTTCATTCCAAGGTTGGAATAACGAGCCAGAAAAACTGATGCCATGGAGAAATAATGACAGGCCAGCAGAAAGTTTTCAATCTCGTGGCGCAAATGGTGGGTCTAATCCATCTCCAACATTGCTGTTTGCTTCAAAGGTTGACGAGAAAAACATCACCATCTCCCCAACAACTCATGGGGGTATCCATAATGTAGAATCTGGCTTGAGCACAACAACGGCCATGAAGACAATAGATCATCCGTCTGGAATAACAAACAAGGCTTTTCCAAGTCCTATTTCTTCCCAACCAAATTTCTTAACTTCAACCCAAATCGGAGGTTTAGGTGGAGCAGTGTCTCAGCTCAGACGTAGATTATCATCTGATGCAGAGAACACCAATTATCAACCTTCAGTAGAATCTCAGACTATGACTTCAACCAGTGAAAAGCTGAAAGAGAAAGAGCTCACCATTGAAGGAGGTGCCATTAGCATATCAAGTGTGTACTCACAAGGGTGA
Protein sequence

>Msa1260420

MELPQARSYGAEGAGRKSTHDFLSLYSNSTAEQDPRPSAQASFLKTHDFLRPLEEVEAKSSAKEEATDEISSVVEKQPPLATPASSVEHLLPGGIGTYSISHINSCVNNNNQRVPKPEASSLFTVHQATSADRNDDNSNCSSHTSSGFTLWEESEIRKGKTGKENNVGDKPIIGDSAAKLGQWTLKERTSQSFSNNHHGSFNSRSSSQTTGQKNQSFMEMMKSAQDCAQDEELENEGTFFLKRESSNVQRGELRVRVDGKSTDQKPNTPRSKHSATEQRRRSKINDRFQMLRELIPHSDQKRDKASFLLEVIEYIHFLQEKVHKYEGSFQGWNNEPEKLMPWRNNDRPAESFQSRGANGGSNPSPTLLFASKVDEKNITISPTTHGGIHNVESGLSTTTAMKTIDHPSGITNKAFPSPISSQPNFLTSTQIGGLGGAVSQLRRRLSSDAENTNYQPSVESQTMTSTSEKLKEKELTIEGGAISISSVYSQG*