Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1213230 | sp|Q7Y040|EJ2_SOLLC | 56.000 | 250 | 90 | 6 | 1 | 234 | 1 | 246 | 3.63e-82 | 248 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1213230 | A0A072URR1 | 88.710 | 248 | 8 | 3 | 1 | 234 | 1 | 242 | 1.57e-155 | 440 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1213230 | TF | MADS-MIKC |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1213120 | Msa1213230 | 0.871170 | 8.380699e-67 | -8.615850e-47 |
| Msa1213230 | Msa1260380 | 0.824750 | 6.815922e-54 | -8.615850e-47 |
| Msa1213230 | Msa1300210 | 0.807403 | 5.141339e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1213230 | MtrunA17_Chr4g0061671 | 87.135 | 171 | 8 | 1 | 1 | 157 | 1 | 171 | 1.14e-103 | 298 |
| Msa1213230 | MtrunA17_Chr6g0455511 | 50.394 | 254 | 102 | 5 | 1 | 234 | 1 | 250 | 2.29e-72 | 221 |
| Msa1213230 | MtrunA17_Chr7g0220111 | 50.000 | 254 | 102 | 7 | 1 | 234 | 1 | 249 | 2.17e-70 | 216 |
| Msa1213230 | MtrunA17_Chr5g0420091 | 52.703 | 222 | 82 | 4 | 1 | 206 | 1 | 215 | 4.53e-69 | 211 |
| Msa1213230 | MtrunA17_Chr3g0122251 | 51.029 | 243 | 89 | 7 | 1 | 220 | 1 | 236 | 2.50e-66 | 205 |
| Msa1213230 | MtrunA17_Chr8g0351051 | 48.661 | 224 | 96 | 6 | 1 | 207 | 1 | 222 | 4.95e-56 | 179 |
| Msa1213230 | MtrunA17_Chr4g0061691 | 45.982 | 224 | 112 | 4 | 1 | 219 | 1 | 220 | 7.46e-55 | 175 |
| Msa1213230 | MtrunA17_Chr8g0366231 | 53.846 | 169 | 69 | 4 | 1 | 162 | 1 | 167 | 1.86e-53 | 172 |
| Msa1213230 | MtrunA17_Chr5g0420081 | 42.562 | 242 | 110 | 7 | 1 | 228 | 1 | 227 | 3.57e-50 | 163 |
| Msa1213230 | MtrunA17_Chr6g0474371 | 49.708 | 171 | 80 | 3 | 1 | 165 | 1 | 171 | 1.68e-46 | 152 |
| Msa1213230 | MtrunA17_Chr4g0061681 | 88.750 | 80 | 3 | 2 | 155 | 234 | 4 | 77 | 3.15e-45 | 145 |
| Msa1213230 | MtrunA17_Chr7g0220121 | 41.593 | 226 | 106 | 7 | 1 | 204 | 1 | 222 | 5.83e-43 | 145 |
| Msa1213230 | MtrunA17_Chr3g0077501 | 41.071 | 224 | 105 | 8 | 1 | 198 | 1 | 223 | 2.65e-42 | 143 |
| Msa1213230 | MtrunA17_Chr1g0204111 | 46.667 | 165 | 84 | 2 | 1 | 162 | 17 | 180 | 1.03e-40 | 140 |
| Msa1213230 | MtrunA17_Chr2g0284911 | 48.980 | 147 | 72 | 2 | 1 | 145 | 16 | 161 | 4.65e-40 | 138 |
| Msa1213230 | MtrunA17_Chr7g0246431 | 51.034 | 145 | 60 | 4 | 1 | 139 | 1 | 140 | 7.89e-40 | 136 |
| Msa1213230 | MtrunA17_Chr8g0380021 | 40.722 | 194 | 96 | 4 | 1 | 178 | 17 | 207 | 9.38e-40 | 137 |
| Msa1213230 | MtrunA17_Chr3g0097101 | 44.134 | 179 | 83 | 4 | 1 | 163 | 16 | 193 | 1.69e-39 | 136 |
| Msa1213230 | MtrunA17_Chr2g0279821 | 44.872 | 156 | 84 | 2 | 1 | 155 | 1 | 155 | 7.26e-39 | 134 |
| Msa1213230 | MtrunA17_Chr8g0351041 | 44.304 | 158 | 84 | 3 | 1 | 155 | 1 | 157 | 1.19e-38 | 132 |
| Msa1213230 | MtrunA17_Chr4g0057151 | 49.682 | 157 | 76 | 3 | 1 | 155 | 1 | 156 | 1.52e-38 | 132 |
| Msa1213230 | MtrunA17_Chr8g0351031 | 44.304 | 158 | 84 | 3 | 1 | 155 | 1 | 157 | 3.71e-38 | 132 |
| Msa1213230 | MtrunA17_Chr4g0049541 | 41.026 | 156 | 90 | 2 | 1 | 155 | 1 | 155 | 5.11e-34 | 121 |
| Msa1213230 | MtrunA17_Chr8g0377561 | 96.552 | 58 | 2 | 0 | 1 | 58 | 1 | 58 | 1.20e-33 | 117 |
| Msa1213230 | MtrunA17_Chr4g0018421 | 42.405 | 158 | 88 | 2 | 1 | 155 | 1 | 158 | 3.09e-33 | 119 |
| Msa1213230 | MtrunA17_Chr5g0411691 | 31.944 | 216 | 140 | 3 | 1 | 214 | 1 | 211 | 1.30e-32 | 118 |
| Msa1213230 | MtrunA17_Chr7g0246381 | 86.885 | 61 | 8 | 0 | 1 | 61 | 1 | 61 | 1.12e-31 | 110 |
| Msa1213230 | MtrunA17_Chr5g0412271 | 42.391 | 184 | 95 | 6 | 1 | 175 | 1 | 182 | 1.47e-31 | 115 |
| Msa1213230 | MtrunA17_Chr2g0308251 | 68.000 | 75 | 24 | 0 | 1 | 75 | 1 | 75 | 3.77e-31 | 110 |
| Msa1213230 | MtrunA17_Chr3g0125241 | 43.448 | 145 | 78 | 2 | 1 | 144 | 26 | 167 | 5.43e-31 | 113 |
| Msa1213230 | MtrunA17_Chr5g0412461 | 41.176 | 170 | 91 | 5 | 1 | 163 | 1 | 168 | 4.32e-30 | 111 |
| Msa1213230 | MtrunA17_Chr4g0020221 | 40.123 | 162 | 70 | 4 | 1 | 147 | 1 | 150 | 2.89e-29 | 110 |
| Msa1213230 | MtrunA17_Chr1g0159661 | 41.290 | 155 | 85 | 3 | 1 | 152 | 1 | 152 | 1.11e-28 | 106 |
| Msa1213230 | MtrunA17_Chr5g0427401 | 35.556 | 180 | 109 | 4 | 1 | 176 | 1 | 177 | 7.84e-28 | 105 |
| Msa1213230 | MtrunA17_Chr1g0173161 | 69.565 | 69 | 21 | 0 | 1 | 69 | 1 | 69 | 3.78e-27 | 99.8 |
| Msa1213230 | MtrunA17_Chr1g0164791 | 33.971 | 209 | 103 | 6 | 1 | 193 | 1 | 190 | 4.04e-27 | 103 |
| Msa1213230 | MtrunA17_Chr4g0049901 | 36.025 | 161 | 94 | 3 | 1 | 155 | 27 | 184 | 2.39e-25 | 99.8 |
| Msa1213230 | MtrunA17_Chr3g0142191 | 39.241 | 158 | 90 | 3 | 1 | 156 | 1 | 154 | 9.22e-25 | 97.8 |
| Msa1213230 | MtrunA17_Chr5g0427921 | 63.333 | 60 | 22 | 0 | 1 | 60 | 1 | 60 | 1.76e-23 | 89.7 |
| Msa1213230 | MtrunA17_Chr8g0377551 | 38.012 | 171 | 92 | 5 | 63 | 220 | 1 | 170 | 1.86e-23 | 93.2 |
| Msa1213230 | MtrunA17_Chr5g0404951 | 32.558 | 172 | 110 | 3 | 1 | 169 | 1 | 169 | 1.82e-22 | 91.7 |
| Msa1213230 | MtrunA17_Chr4g0044071 | 63.793 | 58 | 21 | 0 | 1 | 58 | 1 | 58 | 6.71e-21 | 84.3 |
| Msa1213230 | MtrunA17_Chr5g0425191 | 65.517 | 58 | 20 | 0 | 1 | 58 | 1 | 58 | 1.01e-20 | 83.6 |
| Msa1213230 | MtrunA17_Chr3g0134451 | 57.143 | 70 | 30 | 0 | 1 | 70 | 1 | 70 | 1.38e-20 | 88.2 |
| Msa1213230 | MtrunA17_Chr1g0166611 | 77.778 | 45 | 10 | 0 | 16 | 60 | 20 | 64 | 2.08e-18 | 78.6 |
| Msa1213230 | MtrunA17_Chr2g0292791 | 55.357 | 56 | 25 | 0 | 2 | 57 | 9 | 64 | 2.13e-15 | 72.8 |
| Msa1213230 | MtrunA17_Chr2g0308271 | 33.588 | 131 | 73 | 4 | 28 | 155 | 9 | 128 | 5.73e-15 | 71.2 |
| Msa1213230 | MtrunA17_Chr8g0379021 | 34.043 | 141 | 75 | 5 | 2 | 126 | 12 | 150 | 6.12e-15 | 70.5 |
| Msa1213230 | MtrunA17_Chr3g0089141 | 51.786 | 56 | 27 | 0 | 2 | 57 | 9 | 64 | 8.00e-15 | 71.2 |
| Msa1213230 | MtrunA17_Chr1g0208561 | 51.786 | 56 | 27 | 0 | 2 | 57 | 9 | 64 | 8.00e-15 | 71.2 |
| Msa1213230 | MtrunA17_Chr1g0208581 | 53.571 | 56 | 26 | 0 | 2 | 57 | 9 | 64 | 8.50e-15 | 71.2 |
| Msa1213230 | MtrunA17_Chr5g0417661 | 54.717 | 53 | 24 | 0 | 1 | 53 | 56 | 108 | 1.24e-14 | 68.6 |
| Msa1213230 | MtrunA17_Chr2g0333981 | 40.000 | 95 | 55 | 2 | 1 | 95 | 11 | 103 | 1.59e-14 | 69.3 |
| Msa1213230 | MtrunA17_Chr8g0376821 | 35.821 | 134 | 65 | 4 | 1 | 131 | 1 | 116 | 1.88e-14 | 69.3 |
| Msa1213230 | MtrunA17_Chr3g0099421 | 55.357 | 56 | 25 | 0 | 2 | 57 | 34 | 89 | 2.03e-14 | 70.5 |
| Msa1213230 | MtrunA17_Chr2g0325971 | 50.000 | 56 | 28 | 0 | 2 | 57 | 9 | 64 | 2.31e-14 | 69.7 |
| Msa1213230 | MtrunA17_Chr1g0206701 | 25.957 | 235 | 130 | 6 | 2 | 210 | 9 | 225 | 2.37e-14 | 70.1 |
| Msa1213230 | MtrunA17_Chr8g0357771 | 46.774 | 62 | 33 | 0 | 1 | 62 | 1 | 62 | 3.23e-14 | 68.6 |
| Msa1213230 | MtrunA17_Chr1g0149391 | 55.357 | 56 | 25 | 0 | 2 | 57 | 9 | 64 | 4.19e-14 | 69.3 |
| Msa1213230 | MtrunA17_Chr3g0099411 | 51.786 | 56 | 27 | 0 | 2 | 57 | 9 | 64 | 5.29e-14 | 68.6 |
| Msa1213230 | MtrunA17_Chr5g0419601 | 54.386 | 57 | 26 | 0 | 1 | 57 | 8 | 64 | 7.57e-14 | 68.6 |
| Msa1213230 | MtrunA17_Chr1g0206721 | 51.786 | 56 | 27 | 0 | 2 | 57 | 9 | 64 | 9.16e-14 | 68.6 |
| Msa1213230 | MtrunA17_Chr8g0355091 | 51.786 | 56 | 27 | 0 | 2 | 57 | 9 | 64 | 9.43e-14 | 68.2 |
| Msa1213230 | MtrunA17_Chr1g0175611 | 35.036 | 137 | 72 | 6 | 1 | 136 | 1 | 121 | 9.90e-14 | 67.0 |
| Msa1213230 | MtrunA17_Chr1g0187361 | 51.786 | 56 | 27 | 0 | 2 | 57 | 9 | 64 | 1.41e-13 | 67.8 |
| Msa1213230 | MtrunA17_Chr1g0169761 | 34.351 | 131 | 71 | 3 | 1 | 131 | 1 | 116 | 1.56e-13 | 66.6 |
| Msa1213230 | MtrunA17_Chr4g0052061 | 45.902 | 61 | 33 | 0 | 1 | 61 | 1 | 61 | 1.58e-13 | 66.2 |
| Msa1213230 | MtrunA17_Chr1g0188671 | 51.786 | 56 | 27 | 0 | 2 | 57 | 47 | 102 | 1.87e-13 | 68.2 |
| Msa1213230 | MtrunA17_Chr2g0317451 | 53.571 | 56 | 26 | 0 | 2 | 57 | 9 | 64 | 2.06e-13 | 67.4 |
| Msa1213230 | MtrunA17_Chr2g0317481 | 53.571 | 56 | 26 | 0 | 2 | 57 | 9 | 64 | 2.29e-13 | 67.4 |
| Msa1213230 | MtrunA17_Chr5g0422941 | 28.512 | 242 | 117 | 8 | 2 | 211 | 9 | 226 | 2.97e-13 | 67.0 |
| Msa1213230 | MtrunA17_Chr5g0422421 | 53.571 | 56 | 26 | 0 | 2 | 57 | 9 | 64 | 5.19e-13 | 66.2 |
| Msa1213230 | MtrunA17_Chr4g0060841 | 50.943 | 53 | 26 | 0 | 1 | 53 | 1 | 53 | 6.08e-13 | 67.4 |
| Msa1213230 | MtrunA17_Chr1g0180591 | 47.368 | 57 | 30 | 0 | 1 | 57 | 1 | 57 | 7.46e-13 | 64.7 |
| Msa1213230 | MtrunA17_Chr4g0074101 | 47.368 | 57 | 30 | 0 | 1 | 57 | 1 | 57 | 1.04e-12 | 64.7 |
| Msa1213230 | MtrunA17_Chr4g0052081 | 45.763 | 59 | 32 | 0 | 1 | 59 | 1 | 59 | 1.04e-12 | 64.3 |
| Msa1213230 | MtrunA17_Chr1g0175601 | 49.123 | 57 | 29 | 0 | 1 | 57 | 1 | 57 | 1.25e-12 | 64.3 |
| Msa1213230 | MtrunA17_Chr2g0300421 | 48.214 | 56 | 29 | 0 | 2 | 57 | 9 | 64 | 1.56e-12 | 63.9 |
| Msa1213230 | MtrunA17_Chr1g0206991 | 48.214 | 56 | 29 | 0 | 2 | 57 | 9 | 64 | 1.66e-12 | 63.9 |
| Msa1213230 | MtrunA17_Chr4g0018951 | 34.959 | 123 | 62 | 4 | 16 | 126 | 26 | 142 | 2.28e-12 | 63.2 |
| Msa1213230 | MtrunA17_Chr3g0085241 | 28.824 | 170 | 99 | 6 | 1 | 150 | 40 | 207 | 5.67e-12 | 63.5 |
| Msa1213230 | MtrunA17_Chr3g0119901 | 28.235 | 170 | 100 | 6 | 1 | 150 | 8 | 175 | 1.13e-11 | 62.0 |
| Msa1213230 | MtrunA17_Chr4g0071601 | 42.105 | 95 | 53 | 2 | 1 | 95 | 11 | 103 | 1.21e-11 | 61.6 |
| Msa1213230 | MtrunA17_Chr8g0356071 | 42.623 | 61 | 35 | 0 | 1 | 61 | 1 | 61 | 2.72e-11 | 60.1 |
| Msa1213230 | MtrunA17_Chr2g0300441 | 48.276 | 58 | 28 | 1 | 2 | 57 | 7 | 64 | 3.26e-11 | 61.2 |
| Msa1213230 | MtrunA17_Chr3g0089151 | 44.643 | 56 | 31 | 0 | 2 | 57 | 9 | 64 | 4.00e-11 | 58.9 |
| Msa1213230 | MtrunA17_Chr3g0111841 | 50.000 | 54 | 27 | 0 | 8 | 61 | 2 | 55 | 7.81e-11 | 56.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1213230 | AT2G03710.2 | 48.473 | 262 | 102 | 7 | 1 | 234 | 1 | 257 | 3.66e-69 | 213 |
| Msa1213230 | AT2G03710.1 | 48.289 | 263 | 102 | 7 | 1 | 234 | 1 | 258 | 4.79e-69 | 213 |
| Msa1213230 | AT3G02310.1 | 50.198 | 253 | 104 | 7 | 1 | 234 | 1 | 250 | 1.10e-68 | 211 |
| Msa1213230 | AT5G15800.1 | 49.416 | 257 | 101 | 8 | 1 | 234 | 1 | 251 | 4.19e-67 | 207 |
| Msa1213230 | AT1G24260.3 | 62.353 | 170 | 57 | 2 | 1 | 165 | 1 | 168 | 2.19e-66 | 205 |
| Msa1213230 | AT2G03710.3 | 61.628 | 172 | 50 | 3 | 1 | 156 | 1 | 172 | 2.26e-66 | 203 |
| Msa1213230 | AT3G02310.2 | 65.605 | 157 | 52 | 2 | 1 | 155 | 1 | 157 | 1.42e-65 | 202 |
| Msa1213230 | AT5G15800.2 | 66.242 | 157 | 51 | 2 | 1 | 155 | 1 | 157 | 4.95e-65 | 202 |
| Msa1213230 | AT1G24260.1 | 64.151 | 159 | 53 | 1 | 1 | 155 | 1 | 159 | 1.02e-64 | 201 |
| Msa1213230 | AT1G24260.2 | 63.750 | 160 | 53 | 1 | 1 | 155 | 1 | 160 | 1.36e-64 | 201 |
| Msa1213230 | AT1G69120.2 | 57.325 | 157 | 65 | 2 | 1 | 155 | 1 | 157 | 4.98e-57 | 181 |
| Msa1213230 | AT1G69120.1 | 57.325 | 157 | 65 | 2 | 1 | 155 | 1 | 157 | 1.98e-56 | 181 |
| Msa1213230 | AT1G26310.1 | 57.407 | 162 | 65 | 2 | 1 | 158 | 1 | 162 | 5.17e-55 | 177 |
| Msa1213230 | AT2G45650.1 | 58.974 | 156 | 62 | 2 | 1 | 155 | 1 | 155 | 2.36e-53 | 172 |
| Msa1213230 | AT5G60910.1 | 52.500 | 160 | 68 | 2 | 1 | 155 | 1 | 157 | 9.98e-53 | 171 |
| Msa1213230 | AT4G09960.2 | 45.918 | 196 | 94 | 5 | 1 | 185 | 1 | 195 | 1.63e-47 | 156 |
| Msa1213230 | AT4G09960.1 | 45.745 | 188 | 97 | 4 | 1 | 185 | 1 | 186 | 3.02e-46 | 154 |
| Msa1213230 | AT4G09960.6 | 45.745 | 188 | 97 | 4 | 1 | 185 | 2 | 187 | 3.11e-46 | 154 |
| Msa1213230 | AT4G09960.5 | 45.745 | 188 | 97 | 4 | 1 | 185 | 11 | 196 | 4.36e-46 | 153 |
| Msa1213230 | AT4G09960.3 | 45.745 | 188 | 97 | 4 | 1 | 185 | 27 | 212 | 1.11e-45 | 153 |
| Msa1213230 | AT3G61120.1 | 51.497 | 167 | 70 | 3 | 1 | 162 | 1 | 161 | 3.99e-45 | 151 |
| Msa1213230 | AT4G09960.4 | 46.073 | 191 | 96 | 5 | 1 | 185 | 96 | 285 | 1.08e-43 | 150 |
| Msa1213230 | AT4G18960.1 | 44.878 | 205 | 90 | 7 | 2 | 190 | 18 | 215 | 1.40e-43 | 147 |
| Msa1213230 | AT4G11880.2 | 50.633 | 158 | 75 | 2 | 1 | 156 | 1 | 157 | 3.80e-42 | 141 |
| Msa1213230 | AT4G11880.3 | 50.633 | 158 | 75 | 2 | 1 | 156 | 1 | 157 | 3.80e-42 | 141 |
| Msa1213230 | AT5G62165.10 | 47.134 | 157 | 80 | 2 | 1 | 155 | 1 | 156 | 2.82e-41 | 140 |
| Msa1213230 | AT5G62165.4 | 47.134 | 157 | 80 | 2 | 1 | 155 | 1 | 156 | 2.82e-41 | 140 |
| Msa1213230 | AT3G30260.1 | 47.333 | 150 | 77 | 1 | 1 | 148 | 1 | 150 | 6.16e-41 | 140 |
| Msa1213230 | AT5G62165.17 | 44.937 | 158 | 84 | 2 | 1 | 156 | 1 | 157 | 1.58e-40 | 137 |
| Msa1213230 | AT5G62165.12 | 44.937 | 158 | 84 | 2 | 1 | 156 | 1 | 157 | 1.58e-40 | 137 |
| Msa1213230 | AT5G62165.11 | 44.937 | 158 | 84 | 2 | 1 | 156 | 1 | 157 | 1.58e-40 | 137 |
| Msa1213230 | AT2G45660.2 | 44.654 | 159 | 85 | 2 | 1 | 157 | 1 | 158 | 1.96e-40 | 136 |
| Msa1213230 | AT4G11880.4 | 52.381 | 147 | 67 | 2 | 1 | 145 | 1 | 146 | 2.21e-40 | 138 |
| Msa1213230 | AT4G11880.1 | 52.381 | 147 | 67 | 2 | 1 | 145 | 1 | 146 | 2.21e-40 | 138 |
| Msa1213230 | AT2G42830.1 | 45.810 | 179 | 80 | 4 | 1 | 163 | 16 | 193 | 2.30e-40 | 139 |
| Msa1213230 | AT2G42830.2 | 45.304 | 181 | 80 | 4 | 1 | 163 | 16 | 195 | 3.24e-40 | 139 |
| Msa1213230 | AT4G22950.2 | 48.571 | 175 | 68 | 5 | 1 | 157 | 1 | 171 | 6.73e-40 | 135 |
| Msa1213230 | AT3G58780.1 | 48.667 | 150 | 70 | 3 | 1 | 146 | 16 | 162 | 9.66e-40 | 137 |
| Msa1213230 | AT3G58780.5 | 48.667 | 150 | 70 | 3 | 1 | 146 | 22 | 168 | 1.12e-39 | 137 |
| Msa1213230 | AT2G45660.1 | 45.223 | 157 | 83 | 2 | 1 | 155 | 1 | 156 | 1.15e-39 | 136 |
| Msa1213230 | AT5G62165.6 | 46.939 | 147 | 75 | 2 | 1 | 145 | 1 | 146 | 1.55e-39 | 134 |
| Msa1213230 | AT5G62165.9 | 46.939 | 147 | 75 | 2 | 1 | 145 | 1 | 146 | 1.55e-39 | 134 |
| Msa1213230 | AT5G62165.7 | 46.939 | 147 | 75 | 2 | 1 | 145 | 1 | 146 | 1.55e-39 | 134 |
| Msa1213230 | AT5G62165.8 | 46.939 | 147 | 75 | 2 | 1 | 145 | 1 | 146 | 1.55e-39 | 134 |
| Msa1213230 | AT5G62165.13 | 46.939 | 147 | 75 | 2 | 1 | 145 | 1 | 146 | 1.55e-39 | 134 |
| Msa1213230 | AT5G62165.3 | 45.223 | 157 | 83 | 2 | 1 | 155 | 1 | 156 | 2.44e-39 | 135 |
| Msa1213230 | AT5G62165.1 | 45.223 | 157 | 83 | 2 | 1 | 155 | 1 | 156 | 2.44e-39 | 135 |
| Msa1213230 | AT5G62165.2 | 45.223 | 157 | 83 | 2 | 1 | 155 | 1 | 156 | 2.44e-39 | 135 |
| Msa1213230 | AT4G22950.3 | 48.538 | 171 | 70 | 4 | 1 | 155 | 1 | 169 | 3.87e-39 | 135 |
| Msa1213230 | AT4G22950.1 | 48.538 | 171 | 70 | 4 | 1 | 155 | 1 | 169 | 3.87e-39 | 135 |
| Msa1213230 | AT3G58780.4 | 49.650 | 143 | 65 | 3 | 1 | 139 | 16 | 155 | 2.93e-38 | 134 |
| Msa1213230 | AT3G58780.2 | 46.575 | 146 | 72 | 1 | 1 | 146 | 16 | 155 | 9.81e-37 | 129 |
| Msa1213230 | AT3G57230.1 | 44.595 | 148 | 80 | 2 | 1 | 147 | 1 | 147 | 3.20e-36 | 128 |
| Msa1213230 | AT3G57230.4 | 44.595 | 148 | 80 | 2 | 1 | 147 | 1 | 147 | 3.20e-36 | 128 |
| Msa1213230 | AT3G57230.2 | 46.043 | 139 | 73 | 2 | 1 | 138 | 1 | 138 | 4.45e-36 | 125 |
| Msa1213230 | AT3G58780.3 | 41.954 | 174 | 71 | 3 | 1 | 146 | 16 | 187 | 6.32e-36 | 128 |
| Msa1213230 | AT5G10140.4 | 42.038 | 157 | 85 | 1 | 1 | 157 | 1 | 151 | 1.11e-35 | 125 |
| Msa1213230 | AT4G37940.4 | 40.506 | 158 | 92 | 2 | 1 | 157 | 1 | 157 | 5.25e-35 | 124 |
| Msa1213230 | AT4G37940.1 | 41.026 | 156 | 90 | 2 | 1 | 155 | 1 | 155 | 1.33e-34 | 124 |
| Msa1213230 | AT4G37940.3 | 43.165 | 139 | 77 | 2 | 1 | 138 | 1 | 138 | 3.38e-34 | 121 |
| Msa1213230 | AT5G10140.2 | 42.857 | 147 | 78 | 1 | 1 | 147 | 1 | 141 | 4.87e-34 | 120 |
| Msa1213230 | AT5G10140.1 | 42.857 | 147 | 78 | 1 | 1 | 147 | 1 | 141 | 8.28e-34 | 120 |
| Msa1213230 | AT5G10140.3 | 42.857 | 147 | 78 | 1 | 1 | 147 | 1 | 141 | 1.08e-33 | 120 |
| Msa1213230 | AT5G62165.14 | 61.905 | 84 | 31 | 1 | 1 | 84 | 1 | 83 | 7.77e-32 | 112 |
| Msa1213230 | AT2G22630.1 | 39.306 | 173 | 97 | 4 | 1 | 168 | 1 | 170 | 1.38e-31 | 115 |
| Msa1213230 | AT2G22630.2 | 39.306 | 173 | 97 | 4 | 1 | 168 | 1 | 170 | 1.38e-31 | 115 |
| Msa1213230 | AT3G57390.3 | 42.197 | 173 | 86 | 5 | 1 | 163 | 1 | 169 | 1.69e-31 | 115 |
| Msa1213230 | AT3G57390.1 | 42.197 | 173 | 86 | 5 | 1 | 163 | 1 | 169 | 2.74e-31 | 115 |
| Msa1213230 | AT2G14210.1 | 40.909 | 154 | 87 | 2 | 1 | 153 | 1 | 151 | 2.87e-31 | 115 |
| Msa1213230 | AT2G14210.2 | 40.385 | 156 | 92 | 1 | 1 | 155 | 1 | 156 | 2.91e-31 | 115 |
| Msa1213230 | AT5G13790.2 | 45.062 | 162 | 76 | 4 | 1 | 158 | 1 | 153 | 2.61e-30 | 114 |
| Msa1213230 | AT5G13790.1 | 44.304 | 158 | 80 | 3 | 1 | 158 | 1 | 150 | 3.40e-30 | 113 |
| Msa1213230 | AT5G51870.1 | 35.885 | 209 | 123 | 5 | 1 | 206 | 1 | 201 | 3.81e-30 | 111 |
| Msa1213230 | AT5G51870.2 | 40.141 | 142 | 81 | 2 | 1 | 139 | 1 | 141 | 7.35e-30 | 109 |
| Msa1213230 | AT5G51870.5 | 40.278 | 144 | 78 | 3 | 1 | 139 | 24 | 164 | 1.20e-29 | 110 |
| Msa1213230 | AT5G51870.3 | 33.333 | 213 | 122 | 5 | 1 | 194 | 11 | 222 | 1.29e-29 | 110 |
| Msa1213230 | AT4G24540.1 | 38.164 | 207 | 111 | 4 | 1 | 191 | 1 | 206 | 1.34e-29 | 110 |
| Msa1213230 | AT5G51870.4 | 33.333 | 213 | 122 | 5 | 1 | 194 | 1 | 212 | 1.35e-29 | 110 |
| Msa1213230 | AT5G65080.3 | 36.898 | 187 | 112 | 2 | 1 | 187 | 8 | 188 | 6.76e-29 | 107 |
| Msa1213230 | AT5G20240.1 | 39.877 | 163 | 94 | 2 | 1 | 162 | 1 | 160 | 8.28e-29 | 108 |
| Msa1213230 | AT5G20240.2 | 42.069 | 145 | 80 | 2 | 1 | 144 | 1 | 142 | 1.71e-28 | 105 |
| Msa1213230 | AT1G71692.1 | 41.420 | 169 | 80 | 3 | 1 | 155 | 1 | 164 | 2.15e-28 | 107 |
| Msa1213230 | AT5G51860.2 | 32.701 | 211 | 124 | 7 | 1 | 207 | 1 | 197 | 2.56e-28 | 106 |
| Msa1213230 | AT2G22540.3 | 39.490 | 157 | 92 | 2 | 1 | 155 | 1 | 156 | 4.56e-28 | 107 |
| Msa1213230 | AT2G22540.1 | 39.490 | 157 | 92 | 2 | 1 | 155 | 1 | 156 | 4.56e-28 | 107 |
| Msa1213230 | AT5G65070.1 | 41.497 | 147 | 80 | 1 | 1 | 147 | 1 | 141 | 7.76e-28 | 105 |
| Msa1213230 | AT5G51860.1 | 39.437 | 142 | 80 | 4 | 1 | 138 | 1 | 140 | 8.03e-28 | 105 |
| Msa1213230 | AT5G65070.4 | 43.165 | 139 | 73 | 1 | 1 | 139 | 1 | 133 | 8.30e-28 | 103 |
| Msa1213230 | AT5G65060.1 | 36.313 | 179 | 103 | 4 | 1 | 178 | 1 | 169 | 1.46e-27 | 104 |
| Msa1213230 | AT5G65050.1 | 37.838 | 185 | 108 | 4 | 1 | 184 | 1 | 179 | 1.69e-27 | 103 |
| Msa1213230 | AT5G65050.3 | 38.693 | 199 | 101 | 6 | 1 | 184 | 1 | 193 | 3.18e-27 | 103 |
| Msa1213230 | AT5G65050.2 | 39.506 | 162 | 88 | 4 | 1 | 162 | 1 | 152 | 9.24e-27 | 102 |
| Msa1213230 | AT5G65050.5 | 35.678 | 199 | 96 | 4 | 1 | 184 | 1 | 182 | 1.98e-26 | 101 |
| Msa1213230 | AT5G23260.3 | 38.994 | 159 | 95 | 2 | 1 | 158 | 1 | 158 | 2.23e-26 | 102 |
| Msa1213230 | AT5G65060.3 | 36.842 | 171 | 97 | 4 | 1 | 170 | 1 | 161 | 7.54e-26 | 100 |
| Msa1213230 | AT5G65060.2 | 35.754 | 179 | 93 | 5 | 1 | 178 | 1 | 158 | 3.70e-25 | 98.2 |
| Msa1213230 | AT2G22540.2 | 36.943 | 157 | 91 | 2 | 1 | 155 | 1 | 151 | 1.98e-24 | 97.4 |
| Msa1213230 | AT5G23260.2 | 33.831 | 201 | 126 | 4 | 1 | 197 | 1 | 198 | 2.29e-24 | 97.8 |
| Msa1213230 | AT5G23260.4 | 34.343 | 198 | 123 | 4 | 1 | 194 | 17 | 211 | 4.08e-24 | 97.4 |
| Msa1213230 | AT5G23260.1 | 34.872 | 195 | 121 | 4 | 1 | 194 | 17 | 206 | 5.35e-24 | 97.1 |
| Msa1213230 | AT5G65070.5 | 56.250 | 80 | 35 | 0 | 1 | 80 | 1 | 80 | 9.53e-24 | 95.1 |
| Msa1213230 | AT5G65070.2 | 56.250 | 80 | 35 | 0 | 1 | 80 | 1 | 80 | 9.65e-24 | 95.5 |
| Msa1213230 | AT5G65080.2 | 39.490 | 157 | 80 | 3 | 1 | 153 | 8 | 153 | 1.06e-23 | 94.7 |
| Msa1213230 | AT3G54340.1 | 37.671 | 146 | 73 | 3 | 1 | 138 | 1 | 136 | 1.12e-23 | 95.5 |
| Msa1213230 | AT5G65070.3 | 34.637 | 179 | 79 | 3 | 1 | 147 | 1 | 173 | 1.38e-21 | 89.7 |
| Msa1213230 | AT1G77980.1 | 38.158 | 152 | 82 | 4 | 1 | 141 | 1 | 151 | 4.03e-21 | 90.5 |
| Msa1213230 | AT1G77080.4 | 36.774 | 155 | 92 | 1 | 1 | 155 | 1 | 149 | 2.50e-20 | 85.5 |
| Msa1213230 | AT1G77080.11 | 36.774 | 155 | 92 | 1 | 1 | 155 | 1 | 149 | 4.81e-20 | 84.3 |
| Msa1213230 | AT1G77080.5 | 36.774 | 155 | 92 | 1 | 1 | 155 | 1 | 149 | 4.83e-20 | 84.3 |
| Msa1213230 | AT1G31140.2 | 37.333 | 150 | 76 | 4 | 1 | 139 | 1 | 143 | 8.00e-20 | 84.7 |
| Msa1213230 | AT1G22130.1 | 54.286 | 70 | 32 | 0 | 1 | 70 | 1 | 70 | 8.81e-20 | 86.7 |
| Msa1213230 | AT1G31140.1 | 37.838 | 148 | 76 | 4 | 1 | 139 | 1 | 141 | 1.03e-19 | 84.3 |
| Msa1213230 | AT1G77080.12 | 37.821 | 156 | 87 | 3 | 1 | 156 | 1 | 146 | 1.02e-18 | 80.1 |
| Msa1213230 | AT1G77080.2 | 38.065 | 155 | 86 | 3 | 1 | 155 | 1 | 145 | 2.18e-18 | 80.5 |
| Msa1213230 | AT1G77950.3 | 51.429 | 70 | 34 | 0 | 1 | 70 | 1 | 70 | 9.13e-18 | 80.1 |
| Msa1213230 | AT1G77950.2 | 51.429 | 70 | 34 | 0 | 1 | 70 | 1 | 70 | 9.13e-18 | 80.1 |
| Msa1213230 | AT1G77950.1 | 51.429 | 70 | 34 | 0 | 1 | 70 | 1 | 70 | 9.13e-18 | 80.1 |
| Msa1213230 | AT1G77950.4 | 51.429 | 70 | 34 | 0 | 1 | 70 | 1 | 70 | 9.13e-18 | 80.1 |
| Msa1213230 | AT1G77080.8 | 42.593 | 108 | 56 | 1 | 1 | 108 | 1 | 102 | 9.01e-17 | 76.6 |
| Msa1213230 | AT1G69120.3 | 44.211 | 95 | 51 | 2 | 63 | 155 | 1 | 95 | 4.80e-16 | 74.3 |
| Msa1213230 | AT4G37435.1 | 57.895 | 57 | 24 | 0 | 1 | 57 | 1 | 57 | 6.27e-16 | 73.6 |
| Msa1213230 | AT1G18750.4 | 43.590 | 78 | 43 | 1 | 1 | 77 | 1 | 78 | 7.73e-16 | 76.3 |
| Msa1213230 | AT1G18750.1 | 43.590 | 78 | 43 | 1 | 1 | 77 | 1 | 78 | 8.04e-16 | 76.3 |
| Msa1213230 | AT1G18750.3 | 43.590 | 78 | 43 | 1 | 1 | 77 | 1 | 78 | 1.17e-15 | 75.9 |
| Msa1213230 | AT1G01530.1 | 54.386 | 57 | 26 | 0 | 1 | 57 | 6 | 62 | 4.63e-15 | 72.4 |
| Msa1213230 | AT2G03060.3 | 44.872 | 78 | 42 | 1 | 1 | 77 | 1 | 78 | 3.09e-14 | 71.6 |
| Msa1213230 | AT2G03060.7 | 44.872 | 78 | 42 | 1 | 1 | 77 | 1 | 78 | 3.09e-14 | 71.6 |
| Msa1213230 | AT2G03060.1 | 44.872 | 78 | 42 | 1 | 1 | 77 | 1 | 78 | 3.09e-14 | 71.6 |
| Msa1213230 | AT2G03060.2 | 44.872 | 78 | 42 | 1 | 1 | 77 | 1 | 78 | 3.81e-14 | 71.2 |
| Msa1213230 | AT4G36590.1 | 46.575 | 73 | 35 | 1 | 2 | 74 | 7 | 75 | 2.04e-13 | 67.8 |
| Msa1213230 | AT1G72350.1 | 38.462 | 91 | 52 | 2 | 2 | 92 | 43 | 129 | 3.22e-13 | 67.0 |
| Msa1213230 | AT1G65360.1 | 47.368 | 57 | 30 | 0 | 1 | 57 | 6 | 62 | 6.60e-13 | 66.2 |
| Msa1213230 | AT1G69540.1 | 50.943 | 53 | 26 | 0 | 1 | 53 | 1 | 53 | 1.98e-12 | 66.2 |
| Msa1213230 | AT1G69540.2 | 50.943 | 53 | 26 | 0 | 1 | 53 | 1 | 53 | 2.51e-12 | 65.9 |
| Msa1213230 | AT5G60440.1 | 50.000 | 56 | 28 | 0 | 2 | 57 | 7 | 62 | 2.88e-12 | 65.5 |
| Msa1213230 | AT3G04100.1 | 45.000 | 60 | 33 | 0 | 2 | 61 | 14 | 73 | 4.26e-12 | 63.5 |
| Msa1213230 | AT3G66656.1 | 45.614 | 57 | 31 | 0 | 1 | 57 | 1 | 57 | 5.26e-12 | 62.8 |
| Msa1213230 | AT5G60910.2 | 35.714 | 98 | 55 | 2 | 63 | 155 | 1 | 95 | 7.16e-12 | 62.4 |
| Msa1213230 | AT2G34440.1 | 43.860 | 57 | 32 | 0 | 1 | 57 | 1 | 57 | 7.70e-12 | 62.4 |
| Msa1213230 | AT1G29962.1 | 50.000 | 60 | 30 | 0 | 2 | 61 | 8 | 67 | 1.01e-11 | 62.4 |
| Msa1213230 | AT2G24840.1 | 27.638 | 199 | 119 | 7 | 1 | 179 | 62 | 255 | 1.29e-11 | 63.2 |
| Msa1213230 | AT1G47760.1 | 51.020 | 49 | 24 | 0 | 1 | 49 | 1 | 49 | 1.58e-11 | 61.6 |
| Msa1213230 | AT1G28460.1 | 48.333 | 60 | 31 | 0 | 2 | 61 | 8 | 67 | 7.91e-11 | 59.7 |
Find 62 sgRNAs with CRISPR-Local
Find 279 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATTTCTTTATAATCTTTA+TGG | 0.069047 | 8_1:-73347803 | None:intergenic |
| GATGAGAATGCTTTCTTAAA+TGG | 0.191603 | 8_1:-73342083 | None:intergenic |
| GTGAATTCCAACTTGCAAAT+TGG | 0.221680 | 8_1:+73347122 | Msa1213230:CDS |
| CTTTCAATCTCAAATATTCT+TGG | 0.237440 | 8_1:-73345307 | None:intergenic |
| AATGCTTTAGGAACCTTCTT+GGG | 0.275687 | 8_1:+73345468 | Msa1213230:intron |
| ACCTGGAACTTGTAAGTTAT+CGG | 0.301270 | 8_1:-73347003 | None:intergenic |
| ACAAGTTCCAGGTAGAATAT+TGG | 0.334594 | 8_1:+73347013 | Msa1213230:CDS |
| AACATTTACCAGAGTATCAT+TGG | 0.339966 | 8_1:-73345157 | None:intergenic |
| TGAATTCCAACTTGCAAATT+GGG | 0.345860 | 8_1:+73347123 | Msa1213230:CDS |
| GCAACGTTAATTGTTGGTTC+AGG | 0.354685 | 8_1:-73347903 | None:intergenic |
| CGAGCAACTTGAAAATCATT+TGG | 0.359293 | 8_1:+73345523 | Msa1213230:CDS |
| TTCATAGAGTTTGCCACGGT+TGG | 0.385936 | 8_1:-73342316 | None:intergenic |
| AAATGCTTTAGGAACCTTCT+TGG | 0.387253 | 8_1:+73345467 | Msa1213230:intron |
| TCCAGGTAGAATATTGGCTT+TGG | 0.396800 | 8_1:+73347019 | Msa1213230:CDS |
| AGAATATTGGCTTTGGAAGC+TGG | 0.410498 | 8_1:+73347026 | Msa1213230:CDS |
| ACCGATAACTTACAAGTTCC+AGG | 0.417009 | 8_1:+73347002 | Msa1213230:CDS |
| GAATATGCAACGTTAATTGT+TGG | 0.418239 | 8_1:-73347909 | None:intergenic |
| ACTTTACCCAATTTGCAAGT+TGG | 0.437659 | 8_1:-73347129 | None:intergenic |
| CAAGTACAGTTATAATGAAC+TGG | 0.445526 | 8_1:+73345119 | Msa1213230:CDS |
| TTGAGGAGGAGGAGAAGGAA+AGG | 0.453993 | 8_1:-73347072 | None:intergenic |
| CCAGAGTATCATTGGCTGGT+TGG | 0.458073 | 8_1:-73345149 | None:intergenic |
| AGTATCATTGGCTGGTTGGT+TGG | 0.465819 | 8_1:-73345145 | None:intergenic |
| AACCTATCTGATTGAGGAGG+AGG | 0.486897 | 8_1:-73347083 | None:intergenic |
| TGAGGAGGAGGAGAAGGAAA+GGG | 0.495076 | 8_1:-73347071 | None:intergenic |
| CTCCTCCTCCTCAATCAGAT+AGG | 0.495712 | 8_1:+73347081 | Msa1213230:CDS |
| GCGTCATCCTTGAGAATGAA+TGG | 0.496440 | 8_1:+73347734 | Msa1213230:CDS |
| GATATTGCACAAATGAATAC+AGG | 0.496917 | 8_1:+73345494 | Msa1213230:CDS |
| TTTACCAGAGTATCATTGGC+TGG | 0.506248 | 8_1:-73345153 | None:intergenic |
| TTAACCAATACAGAAAAGCT+AGG | 0.509865 | 8_1:+73342108 | Msa1213230:five_prime_UTR |
| GTGCAATATCTTCCCCAAGA+AGG | 0.512715 | 8_1:-73345481 | None:intergenic |
| AAATAACGATCTGAGAAGTA+AGG | 0.522802 | 8_1:+73346473 | Msa1213230:CDS |
| GAGAAGGAAAGGGTGCATGA+TGG | 0.528427 | 8_1:-73347061 | None:intergenic |
| TCTGATTGAGGAGGAGGAGA+AGG | 0.530678 | 8_1:-73347077 | None:intergenic |
| GCAACTTGAAAATCATTTGG+AGG | 0.531635 | 8_1:+73345526 | Msa1213230:CDS |
| AAGCTAGGGAGTTCTACTCC+AGG | 0.539620 | 8_1:+73342123 | Msa1213230:five_prime_UTR |
| TATATGCAGCTACAATCCGA+TGG | 0.541973 | 8_1:+73347688 | Msa1213230:intron |
| ATGAATTCAGTAGCACCTCC+TGG | 0.543725 | 8_1:+73342334 | Msa1213230:CDS |
| AAGAAATGGTGTACTCAAGA+AGG | 0.552744 | 8_1:+73342242 | Msa1213230:CDS |
| GTCGAATCCATTCATTCTCA+AGG | 0.558956 | 8_1:-73347741 | None:intergenic |
| GTTCATTATAACTGTACTTG+TGG | 0.559243 | 8_1:-73345116 | None:intergenic |
| CCAACCAGCCAATGATACTC+TGG | 0.559471 | 8_1:+73345149 | Msa1213230:CDS |
| ATATAGCATGATGAAAACAT+TGG | 0.571729 | 8_1:+73345086 | Msa1213230:intron |
| ATGCTTTAGGAACCTTCTTG+GGG | 0.577563 | 8_1:+73345469 | Msa1213230:intron |
| TCCAAAGCCAATATTCTACC+TGG | 0.581815 | 8_1:-73347020 | None:intergenic |
| CTTATCATCTTCTCCAACCG+TGG | 0.584619 | 8_1:+73342303 | Msa1213230:CDS |
| ATATGCAGCTACAATCCGAT+GGG | 0.586179 | 8_1:+73347689 | Msa1213230:intron |
| TGGAGAAACCTATCTGATTG+AGG | 0.593462 | 8_1:-73347089 | None:intergenic |
| TAACCAATACAGAAAAGCTA+GGG | 0.599889 | 8_1:+73342109 | Msa1213230:five_prime_UTR |
| AGCTAGGGAGTTCTACTCCA+GGG | 0.617312 | 8_1:+73342124 | Msa1213230:five_prime_UTR |
| TTTACATCAGCAGAACCCAT+CGG | 0.640734 | 8_1:-73347704 | None:intergenic |
| ACTTAAGAATATAAGATCGA+CGG | 0.644848 | 8_1:+73345553 | Msa1213230:CDS |
| ATATTGGCTTTGGAAGCTGG+TGG | 0.647036 | 8_1:+73347029 | Msa1213230:CDS |
| GATAGGTTTCTCCACCATGT+GGG | 0.657071 | 8_1:+73347098 | Msa1213230:CDS |
| AGATAGGTTTCTCCACCATG+TGG | 0.660803 | 8_1:+73347097 | Msa1213230:CDS |
| TGAATTCATAGAGTTTGCCA+CGG | 0.664927 | 8_1:-73342320 | None:intergenic |
| GGTTCTGCTGATGTAAACGT+TGG | 0.678229 | 8_1:+73347710 | Msa1213230:CDS |
| AGTTGGAATTCACTCCCACA+TGG | 0.680115 | 8_1:-73347112 | None:intergenic |
| AAATCTTACAACGTTCACAA+AGG | 0.680204 | 8_1:+73345339 | Msa1213230:CDS |
| TGGAATTCACTCCCACATGG+TGG | 0.684600 | 8_1:-73347109 | None:intergenic |
| AGAAACCTATCTGATTGAGG+AGG | 0.689173 | 8_1:-73347086 | None:intergenic |
| TAAGAATATAAGATCGACGG+AGG | 0.706354 | 8_1:+73345556 | Msa1213230:CDS |
| ATGGATTCGACACTATGACG+TGG | 0.767612 | 8_1:+73347753 | Msa1213230:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATAATATTTATTAACTTG+AGG | - | chr8_1:73342627-73342646 | None:intergenic | 10.0% |
| !! | TATTCATACATATATATATT+TGG | - | chr8_1:73342810-73342829 | None:intergenic | 10.0% |
| !!! | TTTTATCTTAGTAAAAAATA+TGG | + | chr8_1:73344140-73344159 | Msa1213230:intron | 10.0% |
| !!! | TATAAATTAATTTAGTTTTG+AGG | + | chr8_1:73344794-73344813 | Msa1213230:intron | 10.0% |
| !! | AAAGTAATTAAAAAACTAAA+TGG | + | chr8_1:73345765-73345784 | Msa1213230:intron | 10.0% |
| !!! | AAAATAGTTATTTCATTTTT+TGG | + | chr8_1:73345991-73346010 | Msa1213230:intron | 10.0% |
| !! | TTTGTAAAAAGAAAAAAAAA+AGG | - | chr8_1:73346395-73346414 | None:intergenic | 10.0% |
| !! | AATGTTTACATAAATAAAAA+TGG | + | chr8_1:73347857-73347876 | Msa1213230:three_prime_UTR | 10.0% |
| !!! | ATTTATTTTTTCACAAACAA+AGG | + | chr8_1:73342650-73342669 | Msa1213230:intron | 15.0% |
| !!! | TTTATTTTTTCACAAACAAA+GGG | + | chr8_1:73342651-73342670 | Msa1213230:intron | 15.0% |
| !! | TGTTAAAAACATGTTTAAAT+TGG | + | chr8_1:73343142-73343161 | Msa1213230:intron | 15.0% |
| !! | GTTAAAAACATGTTTAAATT+GGG | + | chr8_1:73343143-73343162 | Msa1213230:intron | 15.0% |
| !!! | GTAATTTTGTTTTTGAATTT+TGG | + | chr8_1:73343216-73343235 | Msa1213230:intron | 15.0% |
| !!! | GCAATTAATGTTTTATTTTT+TGG | - | chr8_1:73343514-73343533 | None:intergenic | 15.0% |
| !!! | CCAATAGTTTTTTTTTTTTT+TGG | - | chr8_1:73343800-73343819 | None:intergenic | 15.0% |
| !! | CCAAAAAAAAAAAAAACTAT+TGG | + | chr8_1:73343797-73343816 | Msa1213230:intron | 15.0% |
| !!! | TAAGCAAAAAACAATTTTTT+AGG | + | chr8_1:73343849-73343868 | Msa1213230:intron | 15.0% |
| !! | AATGATAACATATAAAATGT+AGG | - | chr8_1:73344115-73344134 | None:intergenic | 15.0% |
| !! | TGTTATGAGAATAATATATA+TGG | + | chr8_1:73344171-73344190 | Msa1213230:intron | 15.0% |
| !!! | TAAAAATTGAAGTATTAGTT+TGG | - | chr8_1:73344680-73344699 | None:intergenic | 15.0% |
| !!! | AATTTTTAAGTAGAAGTTTA+TGG | + | chr8_1:73344692-73344711 | Msa1213230:intron | 15.0% |
| !!! | ATTACTTTTTAATACTTATG+TGG | + | chr8_1:73345208-73345227 | Msa1213230:intron | 15.0% |
| !! | AGTAAAAAAAAGAAGAATAT+TGG | - | chr8_1:73346287-73346306 | None:intergenic | 15.0% |
| !!! | AAAAAAAAATCTTATTTGCT+TGG | + | chr8_1:73346638-73346657 | Msa1213230:intron | 15.0% |
| !!! | TCAATTTAAAAGTTTGTTTT+AGG | - | chr8_1:73346727-73346746 | None:intergenic | 15.0% |
| !! | AATACATGAATGAAAAATTA+TGG | + | chr8_1:73346764-73346783 | Msa1213230:intron | 15.0% |
| !!! | TATCATTTTTACCAAATATA+AGG | + | chr8_1:73347176-73347195 | Msa1213230:intron | 15.0% |
| !!! | AAACGTTTTTAATGATTTAA+CGG | + | chr8_1:73347348-73347367 | Msa1213230:intron | 15.0% |
| !! | CAATTTCTTTATAATCTTTA+TGG | - | chr8_1:73347806-73347825 | None:intergenic | 15.0% |
| !!! | TTAAATGGTCTATTTTCTTA+TGG | - | chr8_1:73342071-73342090 | None:intergenic | 20.0% |
| !! | ACACATAATTAGATACATAA+AGG | - | chr8_1:73342382-73342401 | None:intergenic | 20.0% |
| !!! | ATCTAATTATGTGTTTCTTT+TGG | + | chr8_1:73342388-73342407 | Msa1213230:intron | 20.0% |
| !! | TGTCATATTTATTTACCTAT+CGG | - | chr8_1:73342508-73342527 | None:intergenic | 20.0% |
| !! | ATCTTAACTATATGTTTGAT+CGG | - | chr8_1:73342564-73342583 | None:intergenic | 20.0% |
| !! | AATTGAAAACAACTATTTAC+AGG | + | chr8_1:73342690-73342709 | Msa1213230:intron | 20.0% |
| !! | ATATATATTTGGAGACAAAA+TGG | - | chr8_1:73342799-73342818 | None:intergenic | 20.0% |
| !! | ATATTTCCAGAATGTAAAAA+AGG | + | chr8_1:73343084-73343103 | Msa1213230:intron | 20.0% |
| !! | TATTTCCAGAATGTAAAAAA+GGG | + | chr8_1:73343085-73343104 | Msa1213230:intron | 20.0% |
| !! | TATATATCTGATGATTGTTA+GGG | - | chr8_1:73343195-73343214 | None:intergenic | 20.0% |
| !! | ATATATATCTGATGATTGTT+AGG | - | chr8_1:73343196-73343215 | None:intergenic | 20.0% |
| !! | TTCCATATTTGATTCATTAA+GGG | - | chr8_1:73343596-73343615 | None:intergenic | 20.0% |
| !! | TTTCCATATTTGATTCATTA+AGG | - | chr8_1:73343597-73343616 | None:intergenic | 20.0% |
| !! | TAATGAATCAAATATGGAAA+TGG | + | chr8_1:73343597-73343616 | Msa1213230:intron | 20.0% |
| !!! | TTTTTACTTATAAATGTGAC+CGG | + | chr8_1:73343951-73343970 | Msa1213230:intron | 20.0% |
| !!! | ATTTTATTAAATACTCCATC+CGG | - | chr8_1:73343973-73343992 | None:intergenic | 20.0% |
| !!! | TATTTTTTTTCTCTCTTTCA+AGG | - | chr8_1:73344340-73344359 | None:intergenic | 20.0% |
| !! | ATAAAAGAGGAAAATAATCA+TGG | - | chr8_1:73344576-73344595 | None:intergenic | 20.0% |
| !!! | ATGATTATTTTCCTCTTTTA+TGG | + | chr8_1:73344575-73344594 | Msa1213230:intron | 20.0% |
| !!! | TTTTTATAAGCAAAACATAG+GGG | - | chr8_1:73344936-73344955 | None:intergenic | 20.0% |
| !!! | GTTTTTATAAGCAAAACATA+GGG | - | chr8_1:73344937-73344956 | None:intergenic | 20.0% |
| !!! | TGTTTTTATAAGCAAAACAT+AGG | - | chr8_1:73344938-73344957 | None:intergenic | 20.0% |
| !!! | TCAATGATATTGATTTCTAA+GGG | - | chr8_1:73345042-73345061 | None:intergenic | 20.0% |
| !!! | ATCAATGATATTGATTTCTA+AGG | - | chr8_1:73345043-73345062 | None:intergenic | 20.0% |
| !! | TAAGTAATAACTAATTTGAG+TGG | + | chr8_1:73345432-73345451 | Msa1213230:intron | 20.0% |
| !!! | CAAGTTTTTTTCATACAATT+TGG | + | chr8_1:73345924-73345943 | Msa1213230:intron | 20.0% |
| !!! | ATGTATTTTAAAATGTGTGT+TGG | - | chr8_1:73346120-73346139 | None:intergenic | 20.0% |
| !!! | TATGTTTTCCATTGAAATTT+AGG | + | chr8_1:73346527-73346546 | Msa1213230:intron | 20.0% |
| !! | TTAAATAATGTCATACTGAT+AGG | - | chr8_1:73346877-73346896 | None:intergenic | 20.0% |
| !!! | ACATTATTTAAGACTATGTT+TGG | + | chr8_1:73346886-73346905 | Msa1213230:intron | 20.0% |
| !!! | CATTATTTAAGACTATGTTT+GGG | + | chr8_1:73346887-73346906 | Msa1213230:intron | 20.0% |
| !! | AACTCATAAAACCTTATATT+TGG | - | chr8_1:73347190-73347209 | None:intergenic | 20.0% |
| !!! | TCATACACTTTTTTTTTTTG+AGG | + | chr8_1:73347285-73347304 | Msa1213230:intron | 20.0% |
| !!! | CATACACTTTTTTTTTTTGA+GGG | + | chr8_1:73347286-73347305 | Msa1213230:intron | 20.0% |
| !!! | TTTTCATGTTTTTTTTTGTC+AGG | + | chr8_1:73347497-73347516 | Msa1213230:intron | 20.0% |
| ! | AGAGAGAACAAAACAAAAAT+GGG | + | chr8_1:73342153-73342172 | Msa1213230:exon | 25.0% |
| !! | AATTATGTGTTTCTTTTGGT+TGG | + | chr8_1:73342392-73342411 | Msa1213230:intron | 25.0% |
| ! | TCTTAACTATATGTTTGATC+GGG | - | chr8_1:73342563-73342582 | None:intergenic | 25.0% |
| ! | CTTTACACTTTAAACAAATC+TGG | - | chr8_1:73342848-73342867 | None:intergenic | 25.0% |
| !!! | TTTTACCCTTTTTTACATTC+TGG | - | chr8_1:73343093-73343112 | None:intergenic | 25.0% |
| ! | TTGTATTGTATTATGTACGT+AGG | - | chr8_1:73343242-73343261 | None:intergenic | 25.0% |
| !! | ATATAGAGTATTAACAGACT+AGG | + | chr8_1:73343276-73343295 | Msa1213230:intron | 25.0% |
| ! | TATCCTTAGTTAAAACTGTA+CGG | + | chr8_1:73343460-73343479 | Msa1213230:intron | 25.0% |
| ! | AGAAACATGTTATTGAAGAA+GGG | + | chr8_1:73343555-73343574 | Msa1213230:intron | 25.0% |
| !! | AAACAATCGTTTTCTATAAC+GGG | - | chr8_1:73343748-73343767 | None:intergenic | 25.0% |
| !! | CAAACAATCGTTTTCTATAA+CGG | - | chr8_1:73343749-73343768 | None:intergenic | 25.0% |
| !! | TTTTTGCTTATAAATGTGAC+CGG | - | chr8_1:73343839-73343858 | None:intergenic | 25.0% |
| ! | ATGTATCTGGTCATAATTAT+AGG | - | chr8_1:73343900-73343919 | None:intergenic | 25.0% |
| ! | CATTCAATAACTAATGTATC+TGG | - | chr8_1:73343913-73343932 | None:intergenic | 25.0% |
| ! | AATAATCGACTAAATCACTT+CGG | - | chr8_1:73344001-73344020 | None:intergenic | 25.0% |
| !!! | ATAATAAGTTGATGATGTGA+CGG | + | chr8_1:73344366-73344385 | Msa1213230:intron | 25.0% |
| ! | ATAAGCGAAAAACTTTATTG+AGG | + | chr8_1:73344472-73344491 | Msa1213230:intron | 25.0% |
| !! | TACAAAAGTATATAACCTTG+AGG | - | chr8_1:73344525-73344544 | None:intergenic | 25.0% |
| !!! | ATCATGGTTTTATATTGTGT+GGG | - | chr8_1:73344560-73344579 | None:intergenic | 25.0% |
| !!! | AATCATGGTTTTATATTGTG+TGG | - | chr8_1:73344561-73344580 | None:intergenic | 25.0% |
| !! | ATTATTTTCCTCTTTTATGG+AGG | + | chr8_1:73344578-73344597 | Msa1213230:intron | 25.0% |
| ! | TTACACAACTGAAATGATTA+GGG | - | chr8_1:73344871-73344890 | None:intergenic | 25.0% |
| ! | ATTACACAACTGAAATGATT+AGG | - | chr8_1:73344872-73344891 | None:intergenic | 25.0% |
| ! | AACATGTAAATAGAAGTTCA+TGG | - | chr8_1:73344906-73344925 | None:intergenic | 25.0% |
| ! | ATGAACTTCTATTTACATGT+TGG | + | chr8_1:73344905-73344924 | Msa1213230:intron | 25.0% |
| !! | TTTTATAAGCAAAACATAGG+GGG | - | chr8_1:73344935-73344954 | None:intergenic | 25.0% |
| ! | ATATAGCATGATGAAAACAT+TGG | + | chr8_1:73345086-73345105 | Msa1213230:intron | 25.0% |
| ! | CTTTCAATCTCAAATATTCT+TGG | - | chr8_1:73345310-73345329 | None:intergenic | 25.0% |
| !! | ATTCAAGTGCAATTTTCATT+GGG | - | chr8_1:73345379-73345398 | None:intergenic | 25.0% |
| !! | AATTCAAGTGCAATTTTCAT+TGG | - | chr8_1:73345380-73345399 | None:intergenic | 25.0% |
| ! | GAAATGTTTGTAAATGCTTT+AGG | + | chr8_1:73345456-73345475 | Msa1213230:intron | 25.0% |
| ! | ACTTAAGAATATAAGATCGA+CGG | + | chr8_1:73345553-73345572 | Msa1213230:CDS | 25.0% |
| ! | TTGCAATCATATTGTATGTA+TGG | - | chr8_1:73345902-73345921 | None:intergenic | 25.0% |
| !!! | AAAGGTGTTGTTTAAACATT+TGG | - | chr8_1:73346377-73346396 | None:intergenic | 25.0% |
| ! | GAAAACATATGATCTGTATT+TGG | - | chr8_1:73346516-73346535 | None:intergenic | 25.0% |
| ! | AACTTGTACCTAAATTTCAA+TGG | - | chr8_1:73346538-73346557 | None:intergenic | 25.0% |
| ! | ATTGAAATTTAGGTACAAGT+TGG | + | chr8_1:73346537-73346556 | Msa1213230:intron | 25.0% |
| !! | GGTTTTTCTTATGGTAATTT+AGG | + | chr8_1:73346558-73346577 | Msa1213230:intron | 25.0% |
| !!! | TTGGATTAGTATTCTTACTT+TGG | + | chr8_1:73346657-73346676 | Msa1213230:intron | 25.0% |
| !!! | GTTTTAGGTCTATAAACATA+TGG | - | chr8_1:73346712-73346731 | None:intergenic | 25.0% |
| ! | GTAAGATGAATTCAATACTA+AGG | + | chr8_1:73346786-73346805 | Msa1213230:intron | 25.0% |
| !! | ACCTTCTTTTCATGTTAATA+TGG | + | chr8_1:73347640-73347659 | Msa1213230:intron | 25.0% |
| GATGAGAATGCTTTCTTAAA+TGG | - | chr8_1:73342086-73342105 | None:intergenic | 30.0% | |
| TTAACCAATACAGAAAAGCT+AGG | + | chr8_1:73342108-73342127 | Msa1213230:five_prime_UTR | 30.0% | |
| TAACCAATACAGAAAAGCTA+GGG | + | chr8_1:73342109-73342128 | Msa1213230:five_prime_UTR | 30.0% | |
| GAGAGAGAACAAAACAAAAA+TGG | + | chr8_1:73342152-73342171 | Msa1213230:exon | 30.0% | |
| AACAAAACAAAAATGGGAAG+AGG | + | chr8_1:73342159-73342178 | Msa1213230:exon | 30.0% | |
| ACAAAACAAAAATGGGAAGA+GGG | + | chr8_1:73342160-73342179 | Msa1213230:exon | 30.0% | |
| ! | ACTTTTGCTAAGAGAAGAAA+TGG | + | chr8_1:73342228-73342247 | Msa1213230:CDS | 30.0% |
| !! | TTTCTTTTGGTTGGAATATG+TGG | + | chr8_1:73342401-73342420 | Msa1213230:intron | 30.0% |
| TTAACAACATATGCAAGCTT+TGG | + | chr8_1:73342763-73342782 | Msa1213230:intron | 30.0% | |
| AAAAAATCCACTTTGACAAG+AGG | - | chr8_1:73342984-73343003 | None:intergenic | 30.0% | |
| !!! | TGCTGCTTTTATTTCAAGAT+AGG | + | chr8_1:73343041-73343060 | Msa1213230:intron | 30.0% |
| TTCAAGATAGGTTCTTAACT+AGG | + | chr8_1:73343053-73343072 | Msa1213230:intron | 30.0% | |
| TCAAGATAGGTTCTTAACTA+GGG | + | chr8_1:73343054-73343073 | Msa1213230:intron | 30.0% | |
| TTTGCATTGCAATTTAAGGA+TGG | + | chr8_1:73343369-73343388 | Msa1213230:intron | 30.0% | |
| !! | GATGTTGATTTACACTTTAC+AGG | - | chr8_1:73343440-73343459 | None:intergenic | 30.0% |
| ATCCTTAGTTAAAACTGTAC+GGG | + | chr8_1:73343461-73343480 | Msa1213230:intron | 30.0% | |
| CAGAAACATGTTATTGAAGA+AGG | + | chr8_1:73343554-73343573 | Msa1213230:intron | 30.0% | |
| TGCCCTTAATGAATCAAATA+TGG | + | chr8_1:73343591-73343610 | Msa1213230:intron | 30.0% | |
| ! | ACTTTATTGAGGAGTATAAG+AGG | + | chr8_1:73344483-73344502 | Msa1213230:intron | 30.0% |
| ! | GGTCTCATCAAAATTTTGAA+TGG | - | chr8_1:73344659-73344678 | None:intergenic | 30.0% |
| !!! | TAGTTTTGAGGCACTAATAT+TGG | + | chr8_1:73344806-73344825 | Msa1213230:intron | 30.0% |
| TACACAACTGAAATGATTAG+GGG | - | chr8_1:73344870-73344889 | None:intergenic | 30.0% | |
| ! | AAAGTGTCTAATGTGTTCTA+GGG | - | chr8_1:73344996-73345015 | None:intergenic | 30.0% |
| !! | AAAAGTGTCTAATGTGTTCT+AGG | - | chr8_1:73344997-73345016 | None:intergenic | 30.0% |
| ! | ATTTCTAAGGGAAACAAGAT+GGG | - | chr8_1:73345030-73345049 | None:intergenic | 30.0% |
| TCATCATGCTATATGATACA+AGG | - | chr8_1:73345080-73345099 | None:intergenic | 30.0% | |
| GTTCATTATAACTGTACTTG+TGG | - | chr8_1:73345119-73345138 | None:intergenic | 30.0% | |
| CAAGTACAGTTATAATGAAC+TGG | + | chr8_1:73345119-73345138 | Msa1213230:CDS | 30.0% | |
| ! | AACATTTACCAGAGTATCAT+TGG | - | chr8_1:73345160-73345179 | None:intergenic | 30.0% |
| AAATCTTACAACGTTCACAA+AGG | + | chr8_1:73345339-73345358 | Msa1213230:CDS | 30.0% | |
| GATATTGCACAAATGAATAC+AGG | + | chr8_1:73345494-73345513 | Msa1213230:CDS | 30.0% | |
| TTCAATACACGCTCTTTAAT+CGG | + | chr8_1:73346142-73346161 | Msa1213230:intron | 30.0% | |
| !! | GAGACTCACATAATTTTGAT+GGG | - | chr8_1:73346186-73346205 | None:intergenic | 30.0% |
| ! | TGAGACTCACATAATTTTGA+TGG | - | chr8_1:73346187-73346206 | None:intergenic | 30.0% |
| !! | CATTGATTTGGTATAAGTCA+AGG | - | chr8_1:73346430-73346449 | None:intergenic | 30.0% |
| AAATAACGATCTGAGAAGTA+AGG | + | chr8_1:73346473-73346492 | Msa1213230:CDS | 30.0% | |
| !!! | GTACAAGTTGGTTTTTCTTA+TGG | + | chr8_1:73346549-73346568 | Msa1213230:intron | 30.0% |
| TAGTATTCTTACTTTGGACA+TGG | + | chr8_1:73346663-73346682 | Msa1213230:intron | 30.0% | |
| TAGGTCTATAAACATATGGT+GGG | - | chr8_1:73346708-73346727 | None:intergenic | 30.0% | |
| TTAGGTCTATAAACATATGG+TGG | - | chr8_1:73346709-73346728 | None:intergenic | 30.0% | |
| TGAATTCCAACTTGCAAATT+GGG | + | chr8_1:73347123-73347142 | Msa1213230:CDS | 30.0% | |
| ACCTTATAAGATGAACAAGT+GGG | + | chr8_1:73347540-73347559 | Msa1213230:intron | 30.0% | |
| TGACAATGCGTTATTATATG+CGG | - | chr8_1:73347596-73347615 | None:intergenic | 30.0% | |
| ATTAACATGAAAAGAAGGTC+CGG | - | chr8_1:73347639-73347658 | None:intergenic | 30.0% | |
| GCCATATTAACATGAAAAGA+AGG | - | chr8_1:73347644-73347663 | None:intergenic | 30.0% | |
| GAATATGCAACGTTAATTGT+TGG | - | chr8_1:73347912-73347931 | None:intergenic | 30.0% | |
| AAGAAATGGTGTACTCAAGA+AGG | + | chr8_1:73342242-73342261 | Msa1213230:CDS | 35.0% | |
| TGAATTCATAGAGTTTGCCA+CGG | - | chr8_1:73342323-73342342 | None:intergenic | 35.0% | |
| GATATAAGAGAAGAGTTACC+AGG | - | chr8_1:73342355-73342374 | None:intergenic | 35.0% | |
| TTAATTGTGTCCTCTTTCTC+AGG | - | chr8_1:73342473-73342492 | None:intergenic | 35.0% | |
| !!! | TAATTTTGAGTTCAGCCGAT+AGG | + | chr8_1:73342490-73342509 | Msa1213230:intron | 35.0% |
| AACTATATGTTTGATCGGGA+CGG | - | chr8_1:73342559-73342578 | None:intergenic | 35.0% | |
| TCAGATCTTCACAATGTCAT+GGG | - | chr8_1:73342957-73342976 | None:intergenic | 35.0% | |
| TTCAGATCTTCACAATGTCA+TGG | - | chr8_1:73342958-73342977 | None:intergenic | 35.0% | |
| TAGGAGTTACTGTTGTGATT+TGG | + | chr8_1:73343300-73343319 | Msa1213230:intron | 35.0% | |
| TGCAAACGCAAAGTAAAAAC+AGG | - | chr8_1:73343355-73343374 | None:intergenic | 35.0% | |
| TGCGTTTGCATTGCAATTTA+AGG | + | chr8_1:73343365-73343384 | Msa1213230:intron | 35.0% | |
| !! | CCATTTTTCTCTTTCTCTCT+TGG | - | chr8_1:73343397-73343416 | None:intergenic | 35.0% |
| CCAAGAGAGAAAGAGAAAAA+TGG | + | chr8_1:73343394-73343413 | Msa1213230:intron | 35.0% | |
| !!! | TTCCCGTACAGTTTTAACTA+AGG | - | chr8_1:73343466-73343485 | None:intergenic | 35.0% |
| TTTCTTAACATGTGCCCTAA+GGG | + | chr8_1:73343707-73343726 | Msa1213230:intron | 35.0% | |
| TACTTATAAATGTGACCGGA+TGG | + | chr8_1:73343955-73343974 | Msa1213230:intron | 35.0% | |
| TCAAGGTGTATACACTTACA+AGG | - | chr8_1:73344323-73344342 | None:intergenic | 35.0% | |
| ! | GATTTCTAAGGGAAACAAGA+TGG | - | chr8_1:73345031-73345050 | None:intergenic | 35.0% |
| TGATGTAATAATGTGTCACC+TGG | + | chr8_1:73345276-73345295 | Msa1213230:intron | 35.0% | |
| ! | ATATTCTTGGTAATTCTGCC+AGG | - | chr8_1:73345297-73345316 | None:intergenic | 35.0% |
| CTGCTTACTTTGATCTGTTA+AGG | + | chr8_1:73345400-73345419 | Msa1213230:intron | 35.0% | |
| !! | AAATGCTTTAGGAACCTTCT+TGG | + | chr8_1:73345467-73345486 | Msa1213230:intron | 35.0% |
| !! | AATGCTTTAGGAACCTTCTT+GGG | + | chr8_1:73345468-73345487 | Msa1213230:intron | 35.0% |
| CGAGCAACTTGAAAATCATT+TGG | + | chr8_1:73345523-73345542 | Msa1213230:CDS | 35.0% | |
| GCAACTTGAAAATCATTTGG+AGG | + | chr8_1:73345526-73345545 | Msa1213230:CDS | 35.0% | |
| TAAGAATATAAGATCGACGG+AGG | + | chr8_1:73345556-73345575 | Msa1213230:CDS | 35.0% | |
| AACTCAGTGATCTTCACAAT+CGG | + | chr8_1:73346062-73346081 | Msa1213230:intron | 35.0% | |
| TCAATACACGCTCTTTAATC+GGG | + | chr8_1:73346143-73346162 | Msa1213230:intron | 35.0% | |
| GACTTATACCAAATCAATGC+AGG | + | chr8_1:73346431-73346450 | Msa1213230:intron | 35.0% | |
| TACCAAATCAATGCAGGAAA+CGG | + | chr8_1:73346437-73346456 | Msa1213230:intron | 35.0% | |
| ACCTGGAACTTGTAAGTTAT+CGG | - | chr8_1:73347006-73347025 | None:intergenic | 35.0% | |
| ACAAGTTCCAGGTAGAATAT+TGG | + | chr8_1:73347013-73347032 | Msa1213230:CDS | 35.0% | |
| GTGAATTCCAACTTGCAAAT+TGG | + | chr8_1:73347122-73347141 | Msa1213230:CDS | 35.0% | |
| ACTTTACCCAATTTGCAAGT+TGG | - | chr8_1:73347132-73347151 | None:intergenic | 35.0% | |
| CACCTTATAAGATGAACAAG+TGG | + | chr8_1:73347539-73347558 | Msa1213230:intron | 35.0% | |
| TCCCACTTGTTCATCTTATA+AGG | - | chr8_1:73347544-73347563 | None:intergenic | 35.0% | |
| TATAAGATGAACAAGTGGGA+TGG | + | chr8_1:73347544-73347563 | Msa1213230:intron | 35.0% | |
| ATAAGATGAACAAGTGGGAT+GGG | + | chr8_1:73347545-73347564 | Msa1213230:intron | 35.0% | |
| ACAATGCGTTATTATATGCG+GGG | - | chr8_1:73347594-73347613 | None:intergenic | 35.0% | |
| GACAATGCGTTATTATATGC+GGG | - | chr8_1:73347595-73347614 | None:intergenic | 35.0% | |
| !! | ACTCCCTAGCTTTTCTGTAT+TGG | - | chr8_1:73342115-73342134 | None:intergenic | 40.0% |
| ATAAGAGAAGAGTTACCAGG+AGG | - | chr8_1:73342352-73342371 | None:intergenic | 40.0% | |
| ACTGCTGAGAACTCATGTTT+AGG | - | chr8_1:73342744-73342763 | None:intergenic | 40.0% | |
| TGAAACTCCTCTTGTCAAAG+TGG | + | chr8_1:73342974-73342993 | Msa1213230:intron | 40.0% | |
| ! | TGATTGTTAGGGCTTGTTCA+TGG | - | chr8_1:73343184-73343203 | None:intergenic | 40.0% |
| GAGTATTAACAGACTAGGCT+AGG | + | chr8_1:73343281-73343300 | Msa1213230:intron | 40.0% | |
| !! | TTGTGATTTGGTGTCAGAGA+TGG | + | chr8_1:73343312-73343331 | Msa1213230:intron | 40.0% |
| !! | TGTGATTTGGTGTCAGAGAT+GGG | + | chr8_1:73343313-73343332 | Msa1213230:intron | 40.0% |
| GTTTCTTAACATGTGCCCTA+AGG | + | chr8_1:73343706-73343725 | Msa1213230:intron | 40.0% | |
| !! | AGTGTTAACTTGTGCCCTTA+GGG | - | chr8_1:73343724-73343743 | None:intergenic | 40.0% |
| !! | TAGTGTTAACTTGTGCCCTT+AGG | - | chr8_1:73343725-73343744 | None:intergenic | 40.0% |
| TGGTTAATAACTACTCCCTC+CGG | + | chr8_1:73343817-73343836 | Msa1213230:intron | 40.0% | |
| TGCTTATAAATGTGACCGGA+GGG | - | chr8_1:73343835-73343854 | None:intergenic | 40.0% | |
| TTGCTTATAAATGTGACCGG+AGG | - | chr8_1:73343836-73343855 | None:intergenic | 40.0% | |
| ! | TGCGTACTCGATTTGCAAAA+AGG | + | chr8_1:73344272-73344291 | Msa1213230:intron | 40.0% |
| !! | GGAGTATAAGAGGTTCTGAA+CGG | + | chr8_1:73344493-73344512 | Msa1213230:intron | 40.0% |
| ACTTCTCACCTCCATAAAAG+AGG | - | chr8_1:73344589-73344608 | None:intergenic | 40.0% | |
| AGGGGTGATTCAATTTGTGT+AGG | - | chr8_1:73344852-73344871 | None:intergenic | 40.0% | |
| ! | TTTACCAGAGTATCATTGGC+TGG | - | chr8_1:73345156-73345175 | None:intergenic | 40.0% |
| !! | ATGCTTTAGGAACCTTCTTG+GGG | + | chr8_1:73345469-73345488 | Msa1213230:intron | 40.0% |
| AATCGGGTTAAAATCCACGT+CGG | + | chr8_1:73346159-73346178 | Msa1213230:intron | 40.0% | |
| TTTAAACATTTGGCTGCGAC+TGG | - | chr8_1:73346367-73346386 | None:intergenic | 40.0% | |
| CATGGACTCTCACTCTTAAA+TGG | + | chr8_1:73346681-73346700 | Msa1213230:intron | 40.0% | |
| ACCGATAACTTACAAGTTCC+AGG | + | chr8_1:73347002-73347021 | Msa1213230:CDS | 40.0% | |
| !! | TCCAGGTAGAATATTGGCTT+TGG | + | chr8_1:73347019-73347038 | Msa1213230:CDS | 40.0% |
| TCCAAAGCCAATATTCTACC+TGG | - | chr8_1:73347023-73347042 | None:intergenic | 40.0% | |
| !! | AGAATATTGGCTTTGGAAGC+TGG | + | chr8_1:73347026-73347045 | Msa1213230:CDS | 40.0% |
| AGAAACCTATCTGATTGAGG+AGG | - | chr8_1:73347089-73347108 | None:intergenic | 40.0% | |
| TGGAGAAACCTATCTGATTG+AGG | - | chr8_1:73347092-73347111 | None:intergenic | 40.0% | |
| !!! | TTTTTTGTCAGGTAGCCTAG+TGG | + | chr8_1:73347508-73347527 | Msa1213230:intron | 40.0% |
| TAAGGTGAATTCTAGCCACT+AGG | - | chr8_1:73347526-73347545 | None:intergenic | 40.0% | |
| CAATGCGTTATTATATGCGG+GGG | - | chr8_1:73347593-73347612 | None:intergenic | 40.0% | |
| TATATGCAGCTACAATCCGA+TGG | + | chr8_1:73347688-73347707 | Msa1213230:intron | 40.0% | |
| ATATGCAGCTACAATCCGAT+GGG | + | chr8_1:73347689-73347708 | Msa1213230:intron | 40.0% | |
| TTTACATCAGCAGAACCCAT+CGG | - | chr8_1:73347707-73347726 | None:intergenic | 40.0% | |
| GTCGAATCCATTCATTCTCA+AGG | - | chr8_1:73347744-73347763 | None:intergenic | 40.0% | |
| !! | GCAACGTTAATTGTTGGTTC+AGG | - | chr8_1:73347906-73347925 | None:intergenic | 40.0% |
| CTTATCATCTTCTCCAACCG+TGG | + | chr8_1:73342303-73342322 | Msa1213230:CDS | 45.0% | |
| TTCATAGAGTTTGCCACGGT+TGG | - | chr8_1:73342319-73342338 | None:intergenic | 45.0% | |
| ATGAATTCAGTAGCACCTCC+TGG | + | chr8_1:73342334-73342353 | Msa1213230:CDS | 45.0% | |
| TCCTCTTTCTCAGGAACTAG+AGG | - | chr8_1:73342464-73342483 | None:intergenic | 45.0% | |
| ACGCATTCATGCAACTTCGT+TGG | - | chr8_1:73344257-73344276 | None:intergenic | 45.0% | |
| !! | TAAGAGGTTCTGAACGGAGA+AGG | + | chr8_1:73344499-73344518 | Msa1213230:intron | 45.0% |
| ! | GAAACAAGATGGGTTCTGCA+TGG | - | chr8_1:73345020-73345039 | None:intergenic | 45.0% |
| ! | AGTATCATTGGCTGGTTGGT+TGG | - | chr8_1:73345148-73345167 | None:intergenic | 45.0% |
| GTGCAATATCTTCCCCAAGA+AGG | - | chr8_1:73345484-73345503 | None:intergenic | 45.0% | |
| !! | TAATTTTGATGGGACCGACG+TGG | - | chr8_1:73346176-73346195 | None:intergenic | 45.0% |
| !! | CACCGTTTCCTGCATTGATT+TGG | - | chr8_1:73346442-73346461 | None:intergenic | 45.0% |
| !! | ATATTGGCTTTGGAAGCTGG+TGG | + | chr8_1:73347029-73347048 | Msa1213230:CDS | 45.0% |
| AACCTATCTGATTGAGGAGG+AGG | - | chr8_1:73347086-73347105 | None:intergenic | 45.0% | |
| AGATAGGTTTCTCCACCATG+TGG | + | chr8_1:73347097-73347116 | Msa1213230:CDS | 45.0% | |
| GATAGGTTTCTCCACCATGT+GGG | + | chr8_1:73347098-73347117 | Msa1213230:CDS | 45.0% | |
| AGTTGGAATTCACTCCCACA+TGG | - | chr8_1:73347115-73347134 | None:intergenic | 45.0% | |
| CCACTTAGTGGGATAAGACT+CGG | - | chr8_1:73347409-73347428 | None:intergenic | 45.0% | |
| ! | CGAGTCTTATCCCACTAAGT+GGG | + | chr8_1:73347407-73347426 | Msa1213230:intron | 45.0% |
| ! | GAGTCTTATCCCACTAAGTG+GGG | + | chr8_1:73347408-73347427 | Msa1213230:intron | 45.0% |
| ACCAACTGAGTTATGCTCAC+CGG | + | chr8_1:73347617-73347636 | Msa1213230:intron | 45.0% | |
| GGTTCTGCTGATGTAAACGT+TGG | + | chr8_1:73347710-73347729 | Msa1213230:CDS | 45.0% | |
| GCGTCATCCTTGAGAATGAA+TGG | + | chr8_1:73347734-73347753 | Msa1213230:CDS | 45.0% | |
| ATGGATTCGACACTATGACG+TGG | + | chr8_1:73347753-73347772 | Msa1213230:CDS | 45.0% | |
| AAGCTAGGGAGTTCTACTCC+AGG | + | chr8_1:73342123-73342142 | Msa1213230:five_prime_UTR | 50.0% | |
| AGCTAGGGAGTTCTACTCCA+GGG | + | chr8_1:73342124-73342143 | Msa1213230:five_prime_UTR | 50.0% | |
| TTGTTCTCTCTCTCTCTCCC+TGG | - | chr8_1:73342144-73342163 | None:intergenic | 50.0% | |
| ! | GCCTCTAGTTCCTGAGAAAG+AGG | + | chr8_1:73342460-73342479 | Msa1213230:intron | 50.0% |
| ! | CCAGAGTATCATTGGCTGGT+TGG | - | chr8_1:73345152-73345171 | None:intergenic | 50.0% |
| CCAACCAGCCAATGATACTC+TGG | + | chr8_1:73345149-73345168 | Msa1213230:CDS | 50.0% | |
| GGTTAACGATATCCTGGTCG+TGG | - | chr8_1:73346346-73346365 | None:intergenic | 50.0% | |
| ! | GCGACTGGTTAACGATATCC+TGG | - | chr8_1:73346352-73346371 | None:intergenic | 50.0% |
| TGAGGAGGAGGAGAAGGAAA+GGG | - | chr8_1:73347074-73347093 | None:intergenic | 50.0% | |
| TTGAGGAGGAGGAGAAGGAA+AGG | - | chr8_1:73347075-73347094 | None:intergenic | 50.0% | |
| TCTGATTGAGGAGGAGGAGA+AGG | - | chr8_1:73347080-73347099 | None:intergenic | 50.0% | |
| CTCCTCCTCCTCAATCAGAT+AGG | + | chr8_1:73347081-73347100 | Msa1213230:CDS | 50.0% | |
| TGGAATTCACTCCCACATGG+TGG | - | chr8_1:73347112-73347131 | None:intergenic | 50.0% | |
| ! | CCGAGTCTTATCCCACTAAG+TGG | + | chr8_1:73347406-73347425 | Msa1213230:intron | 50.0% |
| CTTATCCCACTAAGTGGGGT+CGG | + | chr8_1:73347412-73347431 | Msa1213230:intron | 50.0% | |
| AACAAGTGGGATGGGATGTC+CGG | + | chr8_1:73347553-73347572 | Msa1213230:intron | 50.0% | |
| GTTATTATATGCGGGGGCTG+GGG | - | chr8_1:73347587-73347606 | None:intergenic | 50.0% | |
| CGTTATTATATGCGGGGGCT+GGG | - | chr8_1:73347588-73347607 | None:intergenic | 50.0% | |
| TCCGGTGAGCATAACTCAGT+TGG | - | chr8_1:73347621-73347640 | None:intergenic | 50.0% | |
| TCTGAACGGAGAAGGCCTCA+AGG | + | chr8_1:73344507-73344526 | Msa1213230:intron | 55.0% | |
| CGACTATGTAGACCACGACC+AGG | + | chr8_1:73346331-73346350 | Msa1213230:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | - | chr8_1:73347420-73347439 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | - | chr8_1:73347421-73347440 | None:intergenic | 55.0% | |
| ACAAGTGGGATGGGATGTCC+GGG | + | chr8_1:73347554-73347573 | Msa1213230:intron | 55.0% | |
| GCGTTATTATATGCGGGGGC+TGG | - | chr8_1:73347589-73347608 | None:intergenic | 55.0% | |
| CAAGTGGGATGGGATGTCCG+GGG | + | chr8_1:73347555-73347574 | Msa1213230:intron | 60.0% | |
| GGGGGCTGGGGTTCGAACCC+CGG | - | chr8_1:73347575-73347594 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 73342067 | 73347942 | 73342067 | ID=Msa1213230;Name=Msa1213230 |
| chr8_1 | mRNA | 73342067 | 73347942 | 73342067 | ID=Msa1213230-mRNA-1;Parent=Msa1213230;Name=Msa1213230-mRNA-1;_AED=0.25;_eAED=0.25;_QI=104|1|1|1|1|1|7|158|234 |
| chr8_1 | exon | 73342067 | 73342355 | 73342067 | ID=Msa1213230-mRNA-1:exon:24902;Parent=Msa1213230-mRNA-1 |
| chr8_1 | exon | 73345092 | 73345170 | 73345092 | ID=Msa1213230-mRNA-1:exon:24903;Parent=Msa1213230-mRNA-1 |
| chr8_1 | exon | 73345302 | 73345360 | 73345302 | ID=Msa1213230-mRNA-1:exon:24904;Parent=Msa1213230-mRNA-1 |
| chr8_1 | exon | 73345478 | 73345577 | 73345478 | ID=Msa1213230-mRNA-1:exon:24905;Parent=Msa1213230-mRNA-1 |
| chr8_1 | exon | 73346453 | 73346494 | 73346453 | ID=Msa1213230-mRNA-1:exon:24906;Parent=Msa1213230-mRNA-1 |
| chr8_1 | exon | 73346993 | 73347144 | 73346993 | ID=Msa1213230-mRNA-1:exon:24907;Parent=Msa1213230-mRNA-1 |
| chr8_1 | exon | 73347697 | 73347942 | 73347697 | ID=Msa1213230-mRNA-1:exon:24908;Parent=Msa1213230-mRNA-1 |
| chr8_1 | five_prime_UTR | 73342067 | 73342170 | 73342067 | ID=Msa1213230-mRNA-1:five_prime_utr;Parent=Msa1213230-mRNA-1 |
| chr8_1 | CDS | 73342171 | 73342355 | 73342171 | ID=Msa1213230-mRNA-1:cds;Parent=Msa1213230-mRNA-1 |
| chr8_1 | CDS | 73345092 | 73345170 | 73345092 | ID=Msa1213230-mRNA-1:cds;Parent=Msa1213230-mRNA-1 |
| chr8_1 | CDS | 73345302 | 73345360 | 73345302 | ID=Msa1213230-mRNA-1:cds;Parent=Msa1213230-mRNA-1 |
| chr8_1 | CDS | 73345478 | 73345577 | 73345478 | ID=Msa1213230-mRNA-1:cds;Parent=Msa1213230-mRNA-1 |
| chr8_1 | CDS | 73346453 | 73346494 | 73346453 | ID=Msa1213230-mRNA-1:cds;Parent=Msa1213230-mRNA-1 |
| chr8_1 | CDS | 73346993 | 73347144 | 73346993 | ID=Msa1213230-mRNA-1:cds;Parent=Msa1213230-mRNA-1 |
| chr8_1 | CDS | 73347697 | 73347784 | 73347697 | ID=Msa1213230-mRNA-1:cds;Parent=Msa1213230-mRNA-1 |
| chr8_1 | three_prime_UTR | 73347785 | 73347942 | 73347785 | ID=Msa1213230-mRNA-1:three_prime_utr;Parent=Msa1213230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
