AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1214280

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1214280 MtrunA17_Chr4g0062921 98.157 434 8 0 1 434 1 434 0.0 887
Msa1214280 MtrunA17_Chr4g0045361 38.649 370 171 12 4 328 6 364 1.87e-61 205
Msa1214280 MtrunA17_Chr5g0422621 40.469 341 140 16 30 350 12 309 1.00e-51 177
Msa1214280 MtrunA17_Chr1g0198601 35.714 336 151 8 29 328 2 308 1.43e-50 175
Msa1214280 MtrunA17_Chr5g0402631 34.539 304 146 8 6 305 31 285 1.97e-37 139
Msa1214280 MtrunA17_Chr1g0175081 43.023 86 45 1 219 300 2 87 2.87e-15 71.2
Msa1214280 MtrunA17_Chr1g0190301 48.235 85 42 1 226 310 166 248 3.24e-15 77.0
Msa1214280 MtrunA17_Chr7g0261911 47.727 88 44 1 226 313 253 338 6.67e-15 76.6
Msa1214280 MtrunA17_Chr2g0304841 37.383 107 59 3 232 331 210 315 8.52e-15 76.6
Msa1214280 MtrunA17_Chr4g0074411 49.296 71 35 1 232 302 198 267 3.79e-14 74.3
Msa1214280 MtrunA17_Chr7g0255711 52.381 63 29 1 231 293 87 148 1.34e-13 71.2
Msa1214280 MtrunA17_Chr1g0175091 43.478 92 47 1 211 297 229 320 1.52e-13 72.0
Msa1214280 MtrunA17_Chr1g0149841 54.839 62 27 1 234 295 190 250 6.33e-13 70.5
Msa1214280 MtrunA17_Chr7g0274471 56.667 60 26 0 235 294 218 277 8.06e-13 70.1
Msa1214280 MtrunA17_Chr5g0400241 52.308 65 29 2 230 293 305 368 1.11e-12 69.7
Msa1214280 MtrunA17_Chr4g0031961 40.404 99 52 3 218 316 119 210 1.12e-12 68.6
Msa1214280 MtrunA17_Chr4g0067981 52.941 68 31 1 232 299 212 278 1.23e-12 69.7
Msa1214280 MtrunA17_Chr5g0417521 53.448 58 27 0 232 289 12 69 1.31e-12 68.9
Msa1214280 MtrunA17_Chr2g0321461 55.172 58 26 0 232 289 42 99 2.32e-12 68.2
Msa1214280 MtrunA17_Chr2g0294911 43.333 90 44 2 232 315 208 296 2.53e-12 68.9
Msa1214280 MtrunA17_Chr4g0074401 46.479 71 37 1 232 302 200 269 3.59e-12 68.2
Msa1214280 MtrunA17_Chr7g0254981 55.000 60 27 0 235 294 50 109 4.40e-12 66.2
Msa1214280 MtrunA17_Chr6g0461641 44.444 81 40 2 232 308 39 118 4.45e-12 67.4
Msa1214280 MtrunA17_Chr1g0162931 61.224 49 19 0 240 288 23 71 5.93e-12 66.2
Msa1214280 MtrunA17_Chr2g0291021 50.746 67 33 0 235 301 49 115 7.37e-12 66.2
Msa1214280 MtrunA17_Chr1g0149831 51.613 62 26 1 234 295 127 184 7.48e-12 65.1
Msa1214280 MtrunA17_Chr1g0161431 46.753 77 38 2 227 301 192 267 8.27e-12 67.4
Msa1214280 MtrunA17_Chr2g0324891 43.056 72 40 1 221 292 147 217 9.59e-12 66.6
Msa1214280 MtrunA17_Chr1g0210911 59.184 49 20 0 240 288 27 75 9.95e-12 65.9
Msa1214280 MtrunA17_Chr3g0109981 46.479 71 38 0 231 301 270 340 1.16e-11 66.2
Msa1214280 MtrunA17_Chr4g0054981 44.776 67 36 1 234 300 309 374 1.27e-11 66.6
Msa1214280 MtrunA17_Chr8g0366281 46.575 73 39 0 229 301 167 239 1.39e-11 65.5
Msa1214280 MtrunA17_Chr5g0409731 54.098 61 26 1 235 293 25 85 1.51e-11 65.1
Msa1214280 MtrunA17_Chr4g0040481 48.387 62 31 1 231 292 154 214 1.55e-11 65.9
Msa1214280 MtrunA17_Chr7g0243081 57.143 49 21 0 240 288 76 124 1.78e-11 65.5
Msa1214280 MtrunA17_Chr6g0479431 49.231 65 33 0 234 298 201 265 1.82e-11 65.5
Msa1214280 MtrunA17_Chr1g0197171 58.182 55 23 0 235 289 44 98 1.86e-11 64.7
Msa1214280 MtrunA17_Chr3g0137101 46.377 69 36 1 234 302 197 264 2.70e-11 65.5
Msa1214280 MtrunA17_Chr2g0290991 58.182 55 23 0 235 289 39 93 2.97e-11 64.3
Msa1214280 MtrunA17_Chr4g0009901 45.588 68 36 1 234 301 167 233 3.45e-11 63.5
Msa1214280 MtrunA17_Chr8g0376881 53.333 60 27 1 234 293 208 266 3.67e-11 65.1
Msa1214280 MtrunA17_Chr1g0154261 38.095 105 60 1 227 331 118 217 3.68e-11 63.9
Msa1214280 MtrunA17_Chr2g0288601 63.043 46 17 0 240 285 76 121 4.33e-11 60.5
Msa1214280 MtrunA17_Chr5g0410741 51.724 58 28 0 231 288 215 272 8.32e-11 63.5
Msa1214280 MtrunA17_Chr7g0258551 50.847 59 29 0 230 288 207 265 8.63e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1214280 AT2G03500.1 50.959 469 158 20 1 434 1 432 4.64e-118 352
Msa1214280 AT1G68670.1 37.535 357 157 12 32 351 13 340 3.87e-61 202
Msa1214280 AT1G25550.1 39.394 330 132 13 18 316 2 294 4.77e-55 186
Msa1214280 AT3G25790.1 33.333 357 141 8 19 333 1 302 7.85e-45 160
Msa1214280 AT1G25550.2 37.966 295 119 11 18 285 2 259 8.33e-43 152
Msa1214280 AT4G37180.1 35.473 296 139 8 7 293 16 268 2.51e-39 145
Msa1214280 AT4G37180.2 34.797 296 148 8 7 293 16 275 5.18e-37 139
Msa1214280 AT4G37180.3 34.722 288 136 8 7 285 16 260 1.03e-34 130
Msa1214280 AT1G13300.1 71.765 85 22 1 234 316 180 264 6.84e-34 130
Msa1214280 AT1G49560.1 64.706 85 25 2 231 314 188 268 1.23e-27 112
Msa1214280 AT3G25790.2 49.533 107 52 1 181 285 140 246 1.30e-20 91.3
Msa1214280 AT3G25790.2 28.409 176 76 6 19 146 1 174 3.83e-11 63.5
Msa1214280 AT1G49560.2 76.364 55 13 0 231 285 188 242 1.57e-20 91.3
Msa1214280 AT4G28610.1 53.333 90 41 1 224 313 214 302 8.37e-19 88.6
Msa1214280 AT5G05090.1 34.932 146 75 4 224 366 70 198 9.18e-16 77.4
Msa1214280 AT2G20400.2 51.899 79 37 1 235 313 231 308 2.18e-14 75.1
Msa1214280 AT2G20400.1 51.899 79 36 1 235 313 231 307 3.38e-14 74.3
Msa1214280 AT3G46640.2 41.489 94 53 2 225 318 134 225 6.06e-14 72.8
Msa1214280 AT3G46640.1 41.489 94 53 2 225 318 134 225 6.06e-14 72.8
Msa1214280 AT2G40970.1 35.200 125 66 2 231 355 101 210 6.75e-14 71.6
Msa1214280 AT3G46640.3 34.507 142 65 3 203 318 86 225 7.78e-14 72.8
Msa1214280 AT3G10760.1 52.381 63 29 1 231 293 101 162 9.87e-14 72.4
Msa1214280 AT5G59570.2 49.231 65 32 1 229 293 135 198 1.83e-13 71.2
Msa1214280 AT5G59570.1 49.231 65 32 1 229 293 135 198 1.83e-13 71.2
Msa1214280 AT2G20570.1 36.486 148 62 5 163 292 76 209 3.87e-13 71.2
Msa1214280 AT2G06020.1 58.182 55 23 0 235 289 86 140 7.01e-13 69.3
Msa1214280 AT3G04030.1 55.172 58 26 0 232 289 42 99 1.58e-12 69.3
Msa1214280 AT5G29000.2 43.820 89 48 1 217 303 211 299 1.61e-12 69.3
Msa1214280 AT5G29000.1 43.820 89 48 1 217 303 168 256 1.73e-12 68.9
Msa1214280 AT5G29000.3 43.820 89 48 1 217 303 168 256 1.73e-12 68.9
Msa1214280 AT5G18240.2 56.897 58 25 0 232 289 42 99 1.82e-12 68.9
Msa1214280 AT5G18240.3 56.897 58 25 0 232 289 42 99 1.82e-12 68.9
Msa1214280 AT3G04030.3 55.172 58 26 0 232 289 42 99 1.84e-12 68.9
Msa1214280 AT2G02060.2 57.692 52 22 0 237 288 31 82 2.02e-12 67.4
Msa1214280 AT2G02060.1 57.692 52 22 0 237 288 31 82 2.02e-12 67.4
Msa1214280 AT5G18240.5 56.897 58 25 0 232 289 42 99 2.08e-12 68.9
Msa1214280 AT5G18240.1 56.897 58 25 0 232 289 42 99 2.13e-12 68.9
Msa1214280 AT5G18240.4 56.897 58 25 0 232 289 42 99 2.13e-12 68.9
Msa1214280 AT5G58080.1 50.000 62 30 1 232 293 191 251 2.99e-12 68.9
Msa1214280 AT2G38300.1 55.769 52 23 0 237 288 56 107 3.85e-12 67.8
Msa1214280 AT5G29000.4 43.678 87 47 1 217 301 211 297 4.83e-12 67.0
Msa1214280 AT3G13040.3 51.613 62 30 0 233 294 239 300 5.89e-12 67.8
Msa1214280 AT3G13040.1 51.613 62 30 0 233 294 239 300 5.89e-12 67.8
Msa1214280 AT3G13040.2 51.613 62 30 0 233 294 239 300 5.89e-12 67.8
Msa1214280 AT2G01760.3 50.769 65 31 1 234 298 134 197 6.08e-12 67.0
Msa1214280 AT2G01760.2 50.769 65 31 1 234 298 227 290 9.66e-12 67.0
Msa1214280 AT2G01760.1 50.769 65 31 1 234 298 199 262 9.98e-12 66.6
Msa1214280 AT2G01060.1 49.296 71 35 1 230 299 9 79 1.09e-11 65.9
Msa1214280 AT5G45580.1 56.364 55 24 0 235 289 7 61 1.20e-11 65.5
Msa1214280 AT5G45580.2 56.364 55 24 0 235 289 23 77 1.42e-11 65.5
Msa1214280 AT1G14600.1 55.769 52 23 0 237 288 25 76 1.81e-11 64.7
Msa1214280 AT3G16857.3 53.333 60 27 1 234 293 166 224 1.89e-11 66.6
Msa1214280 AT3G16857.1 53.333 60 27 1 234 293 236 294 2.40e-11 66.2
Msa1214280 AT3G16857.2 53.333 60 27 1 234 293 236 294 2.49e-11 66.2
Msa1214280 AT3G04450.3 51.667 60 29 0 235 294 238 297 2.51e-11 65.1
Msa1214280 AT3G04450.1 45.833 72 39 0 235 306 238 309 2.97e-11 65.5
Msa1214280 AT5G06800.3 51.667 60 29 0 235 294 192 251 3.10e-11 64.3
Msa1214280 AT3G04450.4 45.833 72 39 0 235 306 198 269 3.14e-11 65.1
Msa1214280 AT3G04450.2 45.833 72 39 0 235 306 198 269 3.14e-11 65.1
Msa1214280 AT2G42660.1 46.250 80 41 1 225 302 38 117 4.30e-11 63.5
Msa1214280 AT1G67710.2 47.887 71 37 0 223 293 116 186 6.91e-11 64.3
Msa1214280 AT1G67710.3 47.887 71 37 0 223 293 107 177 7.26e-11 64.3
Msa1214280 AT5G06800.1 51.667 60 29 0 235 294 192 251 8.44e-11 63.9
Msa1214280 AT5G06800.2 51.667 60 29 0 235 294 192 251 8.85e-11 63.9
Msa1214280 AT1G32240.2 51.724 58 28 0 231 288 209 266 9.12e-11 63.5
Msa1214280 AT1G32240.1 51.724 58 28 0 231 288 209 266 9.64e-11 63.5
Msa1214280 AT5G16560.1 54.545 55 25 0 234 288 218 272 9.73e-11 63.9
Msa1214280 AT5G42630.2 54.545 55 25 0 234 288 104 158 9.74e-11 62.0

Find 127 sgRNAs with CRISPR-Local

Find 179 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACAGAGAGAGATATATAAA+AGG 0.194245 8_1:+74795423 None:intergenic
ATCAACTCCCTTATCTGTTT+TGG 0.218983 8_1:+74793765 None:intergenic
AAATAATGTAATCATTATTA+AGG 0.242268 8_1:+74793042 None:intergenic
TAAATATTATTAGTTAGTTT+TGG 0.269732 8_1:-74792888 Msa1214280:three_prime_UTR
TTTAAGAAATTAGAGTATAG+AGG 0.274487 8_1:-74793016 Msa1214280:three_prime_UTR
AATGATAACAATAACAATAT+TGG 0.280258 8_1:-74794664 Msa1214280:CDS
TGGAGCCAAACAAGTGAATT+AGG 0.287496 8_1:-74794721 Msa1214280:CDS
TTGTTCCTAATTCACTTGTT+TGG 0.309917 8_1:+74794716 None:intergenic
TTCTTGCTTTCCTATGAGTT+TGG 0.321167 8_1:+74794392 None:intergenic
GGATGACAAGTGCACAATTA+TGG 0.322662 8_1:-74794741 Msa1214280:CDS
AGGGAGTTGATGAAGGTTGA+TGG 0.335126 8_1:-74793753 Msa1214280:CDS
AACTGTAGAAACTAATTTAT+CGG 0.335462 8_1:-74792562 None:intergenic
TCTTGCTTTGTAGTTCTTGT+GGG 0.337014 8_1:+74795385 None:intergenic
GGTATGAATTCTTCTAGAAT+TGG 0.343936 8_1:+74794835 None:intergenic
GCTCCACCATTTCTATGTTT+AGG 0.345291 8_1:+74794628 None:intergenic
TGTGCTGCAGTTGCATATTC+TGG 0.345650 8_1:+74793404 None:intergenic
CATGCTGGAGAGGTAGAAAA+AGG 0.354964 8_1:-74794505 Msa1214280:CDS
GTTGTTATTGATAGAATTAA+AGG 0.355331 8_1:+74792660 None:intergenic
CAAGAGCAAAAGAGAGTGTT+TGG 0.366915 8_1:+74795360 None:intergenic
TTATTATTGAACAGAAATAT+AGG 0.370436 8_1:-74793511 Msa1214280:intron
TCCATGTTACTGAAATCATT+TGG 0.380670 8_1:-74795190 Msa1214280:CDS
ATGTATGTGATAAGGCAAAT+TGG 0.383284 8_1:-74794762 Msa1214280:CDS
AGAATCAGATTCTGACTCTT+GGG 0.388127 8_1:-74792715 Msa1214280:three_prime_UTR
GAAGTTGATCATCAAGGAAA+AGG 0.397063 8_1:-74794463 Msa1214280:CDS
AGGATGAAGGGGAGAGGAAA+GGG 0.399338 8_1:-74793115 Msa1214280:CDS
CCAAGTCCAAGTGCACAAAA+TGG 0.410271 8_1:-74793473 Msa1214280:CDS
AGGGGAGTTCTGAGGATGAA+GGG 0.415570 8_1:-74793127 Msa1214280:CDS
ACAGAGAGAGATATATAAAA+GGG 0.418460 8_1:+74795424 None:intergenic
AAGAATCAGATTCTGACTCT+TGG 0.420642 8_1:-74792716 Msa1214280:three_prime_UTR
ACAAATCTACGGTGCAAGTC+TGG 0.427901 8_1:+74794358 None:intergenic
GGAGGAACCCCTACTCTCTA+TGG 0.427913 8_1:-74793377 Msa1214280:CDS
TTGTTATTGATAGAATTAAA+GGG 0.428376 8_1:+74792661 None:intergenic
GATGATGCTAATTGCTTCAC+TGG 0.429693 8_1:+74794814 None:intergenic
GGGTTGGAGAGTATCGAAAA+TGG 0.429853 8_1:-74793179 Msa1214280:CDS
GTAGAAGCTAGTGCTAGTTC+AGG 0.432544 8_1:+74794550 None:intergenic
TTCTTGCTTTGTAGTTCTTG+TGG 0.437935 8_1:+74795384 None:intergenic
GGAAGTAGCTGCTGCGGCGG+CGG 0.442713 8_1:+74793275 None:intergenic
ACAATTCAAACCAAACTCAT+AGG 0.443130 8_1:-74794402 Msa1214280:CDS
GTTAATGCTCTTCAAATGCT+TGG 0.449127 8_1:-74794337 Msa1214280:CDS
GAGGGGAGTTCTGAGGATGA+AGG 0.449245 8_1:-74793128 Msa1214280:CDS
AAATAATAATGTATGTGATA+AGG 0.450078 8_1:-74794770 Msa1214280:CDS
ATTAGTCCTAAACATAGAAA+TGG 0.460300 8_1:-74794634 Msa1214280:CDS
GAGGATGAAGGGGAGAGGAA+AGG 0.465500 8_1:-74793116 Msa1214280:CDS
CACATGTCTCCGGTGAACCT+TGG 0.465967 8_1:+74793207 None:intergenic
GGCAACACCAAAACAGATAA+GGG 0.469043 8_1:-74793772 Msa1214280:CDS
AACCCGTCTCCACATGTCTC+CGG 0.479058 8_1:+74793197 None:intergenic
TTAAGAAATTAGAGTATAGA+GGG 0.479086 8_1:-74793015 Msa1214280:three_prime_UTR
GGGGAGTTCTGAGGATGAAG+GGG 0.481259 8_1:-74793126 Msa1214280:CDS
GGTTTGTTGAAGAGAGCAAT+GGG 0.485151 8_1:-74793094 Msa1214280:CDS
TGAGTTTGTGATGATGCTAC+TGG 0.486233 8_1:+74794436 None:intergenic
CAGTAGTGTAGTACTGATCT+TGG 0.489595 8_1:+74793300 None:intergenic
TTCACCATCTGAACTAGGCT+TGG 0.491547 8_1:-74795233 Msa1214280:CDS
CCACATTACTGCACTGCTCC+AGG 0.496026 8_1:-74793323 Msa1214280:CDS
ATATAAAAGGGAAGGTATGT+TGG 0.498558 8_1:+74795436 None:intergenic
GCCACACGGCCAAGGTTCAC+CGG 0.500443 8_1:-74793216 Msa1214280:CDS
ATTAGCATCATCAGAAACAT+TGG 0.504933 8_1:-74794803 Msa1214280:CDS
GTTCTGAGGATGAAGGGGAG+AGG 0.509113 8_1:-74793121 Msa1214280:CDS
CAAACCAAGATGCATAGGAT+TGG 0.511312 8_1:+74792982 None:intergenic
CAAATGCTTGGTGGATCTCA+AGG 0.514435 8_1:-74794325 Msa1214280:intron
GATGACCACCATAGAGAGTA+GGG 0.520807 8_1:+74793369 None:intergenic
GAAGAGGATAAGAAACATGC+TGG 0.521576 8_1:-74794520 Msa1214280:CDS
GTGTAGTACTGATCTTGGCC+TGG 0.523675 8_1:+74793305 None:intergenic
TGGCAACACCAAAACAGATA+AGG 0.524534 8_1:-74793773 Msa1214280:CDS
GGCGGAAGTAGCTGCTGCGG+CGG 0.525740 8_1:+74793272 None:intergenic
GAGAGTAGTAGCTGGAAAGA+GGG 0.527047 8_1:-74793146 Msa1214280:CDS
AAGTTGATCATCAAGGAAAA+GGG 0.527682 8_1:-74794462 Msa1214280:CDS
TGCATGCAACTTCTCACAAA+CGG 0.528281 8_1:-74795070 Msa1214280:intron
CTACTACAACGGTCCACATA+GGG 0.529377 8_1:-74792739 Msa1214280:three_prime_UTR
CTTGCTTTGTAGTTCTTGTG+GGG 0.530429 8_1:+74795386 None:intergenic
AGAGTGAGATGATGAGAAGT+AGG 0.531857 8_1:+74793347 None:intergenic
AAAACTACTAGCTGTGCTGC+TGG 0.531932 8_1:+74793446 None:intergenic
CAAGCGTTTAGATCGAATCA+AGG 0.533730 8_1:-74794865 Msa1214280:CDS
GGGTTTGTTGAAGAGAGCAA+TGG 0.536366 8_1:-74793095 Msa1214280:CDS
GAAGAGCATTAACAAATCTA+CGG 0.536877 8_1:+74794347 None:intergenic
ATATGACAAAATAGAAAAGA+AGG 0.537548 8_1:+74795316 None:intergenic
TCCAAATGATTTCAGTAACA+TGG 0.537583 8_1:+74795189 None:intergenic
CACCGGAGACATGTGGAGAC+GGG 0.540363 8_1:-74793199 Msa1214280:CDS
ATGGCTTCACCATCTGAACT+AGG 0.543239 8_1:-74795238 Msa1214280:CDS
CAATCCAAGCCTAGTTCAGA+TGG 0.544635 8_1:+74795229 None:intergenic
TGAAGTTAAAAGCCATCTGC+AGG 0.544962 8_1:-74793718 Msa1214280:intron
GGAGAGTAGTAGCTGGAAAG+AGG 0.546618 8_1:-74793147 Msa1214280:CDS
AATGCTCTTCAAATGCTTGG+TGG 0.549954 8_1:-74794334 Msa1214280:CDS
GAATCTGATTCTTCCCTATG+TGG 0.550071 8_1:+74792726 None:intergenic
ACAGATAAGGGAGTTGATGA+AGG 0.551674 8_1:-74793760 Msa1214280:CDS
GAATCAGATTCTGACTCTTG+GGG 0.555795 8_1:-74792714 Msa1214280:three_prime_UTR
GGATGACCACCATAGAGAGT+AGG 0.564523 8_1:+74793368 None:intergenic
AGAGAGATATATAAAAGGGA+AGG 0.566951 8_1:+74795428 None:intergenic
GGATAAGAAACATGCTGGAG+AGG 0.570240 8_1:-74794515 Msa1214280:CDS
ACTACTACAACGGTCCACAT+AGG 0.571850 8_1:-74792740 Msa1214280:three_prime_UTR
AGACGTCGGAGAGTAGTAGC+TGG 0.573303 8_1:-74793154 Msa1214280:CDS
TCTAACAAACCAAGATGCAT+AGG 0.574823 8_1:+74792977 None:intergenic
TATGCAACTGCAGCACATGC+AGG 0.576335 8_1:-74793398 Msa1214280:CDS
TTGCTTTGTAGTTCTTGTGG+GGG 0.576354 8_1:+74795387 None:intergenic
GAGAGAGAATTACCTGCAGA+TGG 0.576980 8_1:+74793706 None:intergenic
TCACCGGAGACATGTGGAGA+CGG 0.576988 8_1:-74793200 Msa1214280:CDS
GGGAATGAAGTTGATCATCA+AGG 0.578253 8_1:-74794469 Msa1214280:CDS
AGTCCTAAACATAGAAATGG+TGG 0.579197 8_1:-74794631 Msa1214280:CDS
GGAGACATGTGGAGACGGGT+TGG 0.587274 8_1:-74793195 Msa1214280:CDS
AGAAATAACTCCTCTTGTCA+AGG 0.588185 8_1:-74794583 Msa1214280:CDS
GCTGCAGTTGCATATTCTGG+TGG 0.594788 8_1:+74793407 None:intergenic
TGAACCTTGGCCGTGTGGCG+TGG 0.595965 8_1:+74793220 None:intergenic
ATAGGAAAGCAAGAAGGTGT+TGG 0.602381 8_1:-74794384 Msa1214280:CDS
AAGACCACGCCACACGGCCA+AGG 0.603883 8_1:-74793224 Msa1214280:CDS
CTGCAGTTGCATATTCTGGT+GGG 0.605931 8_1:+74793408 None:intergenic
TCTGTTATGTACTACTACAA+CGG 0.613011 8_1:-74792750 Msa1214280:three_prime_UTR
AGTAACATGGAGTAGCTATG+TGG 0.617118 8_1:+74795202 None:intergenic
TGGTGCATGTGATGAGGTGG+CGG 0.620813 8_1:+74793254 None:intergenic
AACTCCTCTTGTCAAGGACA+AGG 0.622383 8_1:-74794577 Msa1214280:CDS
GTGGCGTGGTCTTGTAGACA+TGG 0.624325 8_1:+74793234 None:intergenic
CTGGAAAGAGGGGAGTTCTG+AGG 0.624534 8_1:-74793135 Msa1214280:CDS
GGTGGCGGAAGTAGCTGCTG+CGG 0.626284 8_1:+74793269 None:intergenic
AGAGTAGTAGCTGGAAAGAG+GGG 0.629458 8_1:-74793145 Msa1214280:CDS
AAGACCTTGTCCTTGACAAG+AGG 0.632597 8_1:+74794573 None:intergenic
AAACTCATAGGAAAGCAAGA+AGG 0.642113 8_1:-74794390 Msa1214280:CDS
TCCGGTGAACCTTGGCCGTG+TGG 0.647253 8_1:+74793215 None:intergenic
GTCTACAAGACCACGCCACA+CGG 0.648472 8_1:-74793230 Msa1214280:CDS
ACATGGTGCATGTGATGAGG+TGG 0.655489 8_1:+74793251 None:intergenic
CCTGGAGCAGTGCAGTAATG+TGG 0.657609 8_1:+74793323 None:intergenic
TTAGTTTCTACAGTTACACG+TGG 0.660459 8_1:+74792570 None:intergenic
GTGAGAAGTTGCATGCAGAG+AGG 0.660628 8_1:+74795076 None:intergenic
CAAGGTTCACCGGAGACATG+TGG 0.663048 8_1:-74793206 Msa1214280:CDS
TGACAAAATAGAAAAGAAGG+TGG 0.666587 8_1:+74795319 None:intergenic
TAGACATGGTGCATGTGATG+AGG 0.673422 8_1:+74793248 None:intergenic
GCAACTGCAGCACATGCAGG+AGG 0.687455 8_1:-74793395 Msa1214280:CDS
TATCGAAAATGGAAAGACGT+CGG 0.689251 8_1:-74793168 Msa1214280:CDS
GGAACCCCTACTCTCTATGG+TGG 0.690464 8_1:-74793374 Msa1214280:CDS
ATGACCACCATAGAGAGTAG+GGG 0.721767 8_1:+74793370 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAAATTATTATATATTTA+AGG - chr8_1:74793972-74793991 Msa1214280:intron 0.0%
!! TAAAATTATTATATATTTAA+GGG - chr8_1:74793973-74793992 Msa1214280:intron 0.0%
!! AAATAATGTAATCATTATTA+AGG + chr8_1:74794962-74794981 None:intergenic 10.0%
!!! TAAATATTATTAGTTAGTTT+TGG - chr8_1:74795113-74795132 Msa1214280:CDS 10.0%
!! GTTACATATAAAAGAAAAAA+AGG + chr8_1:74792972-74792991 None:intergenic 15.0%
!! AAATAATAATGTATGTGATA+AGG - chr8_1:74793231-74793250 Msa1214280:CDS 15.0%
!! AATGATAACAATAACAATAT+TGG - chr8_1:74793337-74793356 Msa1214280:CDS 15.0%
!! ATACTATAAAAAAGAATAGA+TGG - chr8_1:74793799-74793818 Msa1214280:intron 15.0%
!! TTTCTTTATAAAATAGTCTT+AGG - chr8_1:74793854-74793873 Msa1214280:intron 15.0%
!! AAATTTAGTCAAATGTTATT+AGG - chr8_1:74794085-74794104 Msa1214280:intron 15.0%
!!! AAATGTTTGATTTATTATAG+TGG - chr8_1:74794208-74794227 Msa1214280:intron 15.0%
!! TTATTATTGAACAGAAATAT+AGG - chr8_1:74794490-74794509 Msa1214280:CDS 15.0%
!!! TTGTTATTGATAGAATTAAA+GGG + chr8_1:74795343-74795362 None:intergenic 15.0%
!! ATATGACAAAATAGAAAAGA+AGG + chr8_1:74792688-74792707 None:intergenic 20.0%
!!! GTTATTTAGTTGTTTTAACA+AGG - chr8_1:74792739-74792758 Msa1214280:three_prime_UTR 20.0%
!! ACATATAAAAGAAAAAAAGG+TGG + chr8_1:74792969-74792988 None:intergenic 20.0%
!!! GTTATCATTAATTTCTTTTG+TGG + chr8_1:74793326-74793345 None:intergenic 20.0%
!!! TTATTTCTTTCTTTTGAGAA+TGG + chr8_1:74793406-74793425 None:intergenic 20.0%
!! AAAAAGGTAAAACAAATTCA+GGG - chr8_1:74793512-74793531 Msa1214280:intron 20.0%
!! GCAAAAGAAAACATATAATA+AGG + chr8_1:74793771-74793790 None:intergenic 20.0%
!!! ATCACTCTCAAATTTTAATT+AGG - chr8_1:74794936-74794955 Msa1214280:intron 20.0%
!! TTTAAGAAATTAGAGTATAG+AGG - chr8_1:74794985-74795004 Msa1214280:intron 20.0%
!! TTAAGAAATTAGAGTATAGA+GGG - chr8_1:74794986-74795005 Msa1214280:intron 20.0%
!!! GTTGTTATTGATAGAATTAA+AGG + chr8_1:74795344-74795363 None:intergenic 20.0%
!!! AGTTTCAACTTTAGTATTTT+TGG - chr8_1:74795391-74795410 Msa1214280:five_prime_UTR 20.0%
! ACAGAGAGAGATATATAAAA+GGG + chr8_1:74792580-74792599 None:intergenic 25.0%
!!! TTAGTTGTTTTAACAAGGAA+TGG - chr8_1:74792744-74792763 Msa1214280:three_prime_UTR 25.0%
! ATTAGTCCTAAACATAGAAA+TGG - chr8_1:74793367-74793386 Msa1214280:CDS 25.0%
!!! TTCTTTTGAGAATGGTAAAA+AGG + chr8_1:74793398-74793417 None:intergenic 25.0%
! GAAAAAGGTAAAACAAATTC+AGG - chr8_1:74793511-74793530 Msa1214280:intron 25.0%
! TAATTGATACTAGTGGTATT+GGG + chr8_1:74793912-74793931 None:intergenic 25.0%
! ATAATTGATACTAGTGGTAT+TGG + chr8_1:74793913-74793932 None:intergenic 25.0%
! AATACCACTAGTATCAATTA+TGG - chr8_1:74793912-74793931 Msa1214280:intron 25.0%
!!! GACACAATAGTTTTTCAAAT+GGG - chr8_1:74793995-74794014 Msa1214280:intron 25.0%
!! CTTTTGTATTTTACTTTGCT+TGG - chr8_1:74794426-74794445 Msa1214280:CDS 25.0%
!!! AGTTTTGGATGAATTTTATG+TGG - chr8_1:74795128-74795147 Msa1214280:CDS 25.0%
! ATATAAAAGGGAAGGTATGT+TGG + chr8_1:74792568-74792587 None:intergenic 30.0%
AGAGAGATATATAAAAGGGA+AGG + chr8_1:74792576-74792595 None:intergenic 30.0%
GACAGAGAGAGATATATAAA+AGG + chr8_1:74792581-74792600 None:intergenic 30.0%
TGACAAAATAGAAAAGAAGG+TGG + chr8_1:74792685-74792704 None:intergenic 30.0%
TCCATGTTACTGAAATCATT+TGG - chr8_1:74792811-74792830 Msa1214280:three_prime_UTR 30.0%
TCCAAATGATTTCAGTAACA+TGG + chr8_1:74792815-74792834 None:intergenic 30.0%
TGTCAGATAAGATTTGAACT+CGG + chr8_1:74793028-74793047 None:intergenic 30.0%
!! GGTATGAATTCTTCTAGAAT+TGG + chr8_1:74793169-74793188 None:intergenic 30.0%
ATTAGCATCATCAGAAACAT+TGG - chr8_1:74793198-74793217 Msa1214280:CDS 30.0%
ATGTATGTGATAAGGCAAAT+TGG - chr8_1:74793239-74793258 Msa1214280:CDS 30.0%
TTGTTCCTAATTCACTTGTT+TGG + chr8_1:74793288-74793307 None:intergenic 30.0%
! AAGTTGATCATCAAGGAAAA+GGG - chr8_1:74793539-74793558 Msa1214280:intron 30.0%
ACAATTCAAACCAAACTCAT+AGG - chr8_1:74793599-74793618 Msa1214280:intron 30.0%
!! GAAGAGCATTAACAAATCTA+CGG + chr8_1:74793657-74793676 None:intergenic 30.0%
!! GGACACAATAGTTTTTCAAA+TGG - chr8_1:74793994-74794013 Msa1214280:intron 30.0%
!!! ATGGCTTTTAACTTCATCAT+TGG + chr8_1:74794279-74794298 None:intergenic 30.0%
TAATTCTCTCTCTCAGTTTA+AGG - chr8_1:74794306-74794325 Msa1214280:intron 30.0%
!!! TAGTAGTTTTAGGAGGAATA+TGG - chr8_1:74794568-74794587 Msa1214280:CDS 30.0%
!!! AGTAGTTTTAGGAGGAATAT+GGG - chr8_1:74794569-74794588 Msa1214280:CDS 30.0%
!! ATATTGCATGCAGTTTTTAG+TGG - chr8_1:74795165-74795184 Msa1214280:CDS 30.0%
!!! TATTGCATGCAGTTTTTAGT+GGG - chr8_1:74795166-74795185 Msa1214280:CDS 30.0%
!!! AGTTTTTAGTGGGGTTAAAA+AGG - chr8_1:74795176-74795195 Msa1214280:CDS 30.0%
TTAAAAAGGACAGAAAAGTG+AGG - chr8_1:74795190-74795209 Msa1214280:CDS 30.0%
TCTGTTATGTACTACTACAA+CGG - chr8_1:74795251-74795270 Msa1214280:exon 30.0%
TCTTGCTTTGTAGTTCTTGT+GGG + chr8_1:74792619-74792638 None:intergenic 35.0%
TTCTTGCTTTGTAGTTCTTG+TGG + chr8_1:74792620-74792639 None:intergenic 35.0%
AGTCCTAAACATAGAAATGG+TGG - chr8_1:74793370-74793389 Msa1214280:CDS 35.0%
AGAAATAACTCCTCTTGTCA+AGG - chr8_1:74793418-74793437 Msa1214280:CDS 35.0%
AGCTTCTACTCAAAAAGAAG+AGG - chr8_1:74793465-74793484 Msa1214280:CDS 35.0%
! GAAGTTGATCATCAAGGAAA+AGG - chr8_1:74793538-74793557 Msa1214280:intron 35.0%
TTCTTGCTTTCCTATGAGTT+TGG + chr8_1:74793612-74793631 None:intergenic 35.0%
AAACTCATAGGAAAGCAAGA+AGG - chr8_1:74793611-74793630 Msa1214280:intron 35.0%
GTTAATGCTCTTCAAATGCT+TGG - chr8_1:74793664-74793683 Msa1214280:intron 35.0%
AGAGCCATAATTGATACTAG+TGG + chr8_1:74793919-74793938 None:intergenic 35.0%
! ATCAACTCCCTTATCTGTTT+TGG + chr8_1:74794239-74794258 None:intergenic 35.0%
AGTACAGCAACAAACAACAA+AGG + chr8_1:74794369-74794388 None:intergenic 35.0%
AGTTCGTTATAAGTTGTCAG+AGG + chr8_1:74794408-74794427 None:intergenic 35.0%
TATCGAAAATGGAAAGACGT+CGG - chr8_1:74794833-74794852 Msa1214280:CDS 35.0%
! TTTTCCAATCCTATGCATCT+TGG - chr8_1:74795015-74795034 Msa1214280:intron 35.0%
TCTAACAAACCAAGATGCAT+AGG + chr8_1:74795027-74795046 None:intergenic 35.0%
! TTGGATGAATTTTATGTGGC+AGG - chr8_1:74795132-74795151 Msa1214280:CDS 35.0%
!!! ATTGCATGCAGTTTTTAGTG+GGG - chr8_1:74795167-74795186 Msa1214280:CDS 35.0%
AAGAATCAGATTCTGACTCT+TGG - chr8_1:74795285-74795304 Msa1214280:five_prime_UTR 35.0%
AGAATCAGATTCTGACTCTT+GGG - chr8_1:74795286-74795305 Msa1214280:five_prime_UTR 35.0%
TTAGTTTCTACAGTTACACG+TGG + chr8_1:74795434-74795453 None:intergenic 35.0%
TTGCTTTGTAGTTCTTGTGG+GGG + chr8_1:74792617-74792636 None:intergenic 40.0%
CTTGCTTTGTAGTTCTTGTG+GGG + chr8_1:74792618-74792637 None:intergenic 40.0%
!! CAAGAGCAAAAGAGAGTGTT+TGG + chr8_1:74792644-74792663 None:intergenic 40.0%
AGTAACATGGAGTAGCTATG+TGG + chr8_1:74792802-74792821 None:intergenic 40.0%
TGCATGCAACTTCTCACAAA+CGG - chr8_1:74792931-74792950 Msa1214280:three_prime_UTR 40.0%
CAAGCGTTTAGATCGAATCA+AGG - chr8_1:74793136-74793155 Msa1214280:CDS 40.0%
GATGATGCTAATTGCTTCAC+TGG + chr8_1:74793190-74793209 None:intergenic 40.0%
GGATGACAAGTGCACAATTA+TGG - chr8_1:74793260-74793279 Msa1214280:CDS 40.0%
TGGAGCCAAACAAGTGAATT+AGG - chr8_1:74793280-74793299 Msa1214280:CDS 40.0%
GCTCCACCATTTCTATGTTT+AGG + chr8_1:74793376-74793395 None:intergenic 40.0%
GAAGAGGATAAGAAACATGC+TGG - chr8_1:74793481-74793500 Msa1214280:CDS 40.0%
! GGGAATGAAGTTGATCATCA+AGG - chr8_1:74793532-74793551 Msa1214280:intron 40.0%
! TGAGTTTGTGATGATGCTAC+TGG + chr8_1:74793568-74793587 None:intergenic 40.0%
! ATAGGAAAGCAAGAAGGTGT+TGG - chr8_1:74793617-74793636 Msa1214280:intron 40.0%
AATGCTCTTCAAATGCTTGG+TGG - chr8_1:74793667-74793686 Msa1214280:intron 40.0%
GGGCTTATTCATTGTGACTT+AGG - chr8_1:74794015-74794034 Msa1214280:intron 40.0%
TGACTTAGGTAGTACTAGCA+AGG - chr8_1:74794029-74794048 Msa1214280:intron 40.0%
TTCACATCTCTGCTTGATTC+TGG + chr8_1:74794067-74794086 None:intergenic 40.0%
TGGCAACACCAAAACAGATA+AGG - chr8_1:74794228-74794247 Msa1214280:intron 40.0%
GGCAACACCAAAACAGATAA+GGG - chr8_1:74794229-74794248 Msa1214280:intron 40.0%
!! ACAGATAAGGGAGTTGATGA+AGG - chr8_1:74794241-74794260 Msa1214280:intron 40.0%
TGAAGTTAAAAGCCATCTGC+AGG - chr8_1:74794283-74794302 Msa1214280:intron 40.0%
AGAGTGAGATGATGAGAAGT+AGG + chr8_1:74794657-74794676 None:intergenic 40.0%
!! CAGTAGTGTAGTACTGATCT+TGG + chr8_1:74794704-74794723 None:intergenic 40.0%
!! GGTTTGTTGAAGAGAGCAAT+GGG - chr8_1:74794907-74794926 Msa1214280:intron 40.0%
CAAACCAAGATGCATAGGAT+TGG + chr8_1:74795022-74795041 None:intergenic 40.0%
GAATCTGATTCTTCCCTATG+TGG + chr8_1:74795278-74795297 None:intergenic 40.0%
GAATCAGATTCTGACTCTTG+GGG - chr8_1:74795287-74795306 Msa1214280:five_prime_UTR 40.0%
ATGGCTTCACCATCTGAACT+AGG - chr8_1:74792763-74792782 Msa1214280:three_prime_UTR 45.0%
TTCACCATCTGAACTAGGCT+TGG - chr8_1:74792768-74792787 Msa1214280:three_prime_UTR 45.0%
CAATCCAAGCCTAGTTCAGA+TGG + chr8_1:74792775-74792794 None:intergenic 45.0%
! TCGTGCACAATTTTCAGCGA+TGG - chr8_1:74793093-74793112 Msa1214280:CDS 45.0%
AACTCCTCTTGTCAAGGACA+AGG - chr8_1:74793424-74793443 Msa1214280:CDS 45.0%
AAGACCTTGTCCTTGACAAG+AGG + chr8_1:74793431-74793450 None:intergenic 45.0%
GTAGAAGCTAGTGCTAGTTC+AGG + chr8_1:74793454-74793473 None:intergenic 45.0%
GGATAAGAAACATGCTGGAG+AGG - chr8_1:74793486-74793505 Msa1214280:CDS 45.0%
CATGCTGGAGAGGTAGAAAA+AGG - chr8_1:74793496-74793515 Msa1214280:CDS 45.0%
ACAAATCTACGGTGCAAGTC+TGG + chr8_1:74793646-74793665 None:intergenic 45.0%
! CAAATGCTTGGTGGATCTCA+AGG - chr8_1:74793676-74793695 Msa1214280:intron 45.0%
!! AGGGAGTTGATGAAGGTTGA+TGG - chr8_1:74794248-74794267 Msa1214280:intron 45.0%
GAGAGAGAATTACCTGCAGA+TGG + chr8_1:74794298-74794317 None:intergenic 45.0%
! CCATTTTGTGCACTTGGACT+TGG + chr8_1:74794531-74794550 None:intergenic 45.0%
CCAAGTCCAAGTGCACAAAA+TGG - chr8_1:74794528-74794547 Msa1214280:CDS 45.0%
AAAACTACTAGCTGTGCTGC+TGG + chr8_1:74794558-74794577 None:intergenic 45.0%
! GCAGCACAGCTAGTAGTTTT+AGG - chr8_1:74794558-74794577 Msa1214280:CDS 45.0%
!!! GCACAGCTAGTAGTTTTAGG+AGG - chr8_1:74794561-74794580 Msa1214280:CDS 45.0%
CTGCAGTTGCATATTCTGGT+GGG + chr8_1:74794596-74794615 None:intergenic 45.0%
TGTGCTGCAGTTGCATATTC+TGG + chr8_1:74794600-74794619 None:intergenic 45.0%
ATGACCACCATAGAGAGTAG+GGG + chr8_1:74794634-74794653 None:intergenic 45.0%
GATGACCACCATAGAGAGTA+GGG + chr8_1:74794635-74794654 None:intergenic 45.0%
TAGACATGGTGCATGTGATG+AGG + chr8_1:74794756-74794775 None:intergenic 45.0%
!! GGGTTGGAGAGTATCGAAAA+TGG - chr8_1:74794822-74794841 Msa1214280:CDS 45.0%
GAGAGTAGTAGCTGGAAAGA+GGG - chr8_1:74794855-74794874 Msa1214280:CDS 45.0%
AGAGTAGTAGCTGGAAAGAG+GGG - chr8_1:74794856-74794875 Msa1214280:CDS 45.0%
!! GGGTTTGTTGAAGAGAGCAA+TGG - chr8_1:74794906-74794925 Msa1214280:intron 45.0%
ACTACTACAACGGTCCACAT+AGG - chr8_1:74795261-74795280 Msa1214280:five_prime_UTR 45.0%
CTACTACAACGGTCCACATA+GGG - chr8_1:74795262-74795281 Msa1214280:five_prime_UTR 45.0%
! TTCTGACTCTTGGGGTTTTC+TGG - chr8_1:74795295-74795314 Msa1214280:five_prime_UTR 45.0%
TGTAGTTCTTGTGGGGGAGA+GGG + chr8_1:74792611-74792630 None:intergenic 50.0%
TTGTAGTTCTTGTGGGGGAG+AGG + chr8_1:74792612-74792631 None:intergenic 50.0%
GTGAGAAGTTGCATGCAGAG+AGG + chr8_1:74792928-74792947 None:intergenic 50.0%
TGAACTCGGTCTCTTGAGAG+CGG + chr8_1:74793014-74793033 None:intergenic 50.0%
! GGTGCACCATTTTGTGCACT+TGG + chr8_1:74794537-74794556 None:intergenic 50.0%
GCTGCAGTTGCATATTCTGG+TGG + chr8_1:74794597-74794616 None:intergenic 50.0%
TATGCAACTGCAGCACATGC+AGG - chr8_1:74794603-74794622 Msa1214280:CDS 50.0%
GGATGACCACCATAGAGAGT+AGG + chr8_1:74794636-74794655 None:intergenic 50.0%
!! GTGTAGTACTGATCTTGGCC+TGG + chr8_1:74794699-74794718 None:intergenic 50.0%
ACATGGTGCATGTGATGAGG+TGG + chr8_1:74794753-74794772 None:intergenic 50.0%
GGAGAGTAGTAGCTGGAAAG+AGG - chr8_1:74794854-74794873 Msa1214280:CDS 50.0%
!! AGGGGAGTTCTGAGGATGAA+GGG - chr8_1:74794874-74794893 Msa1214280:CDS 50.0%
AGGATGAAGGGGAGAGGAAA+GGG - chr8_1:74794886-74794905 Msa1214280:CDS 50.0%
GGAGGAACCCCTACTCTCTA+TGG - chr8_1:74794624-74794643 Msa1214280:CDS 55.0%
GGAACCCCTACTCTCTATGG+TGG - chr8_1:74794627-74794646 Msa1214280:CDS 55.0%
CCTGGAGCAGTGCAGTAATG+TGG + chr8_1:74794681-74794700 None:intergenic 55.0%
CCACATTACTGCACTGCTCC+AGG - chr8_1:74794678-74794697 Msa1214280:CDS 55.0%
TGGTGCATGTGATGAGGTGG+CGG + chr8_1:74794750-74794769 None:intergenic 55.0%
!! GTGGCGTGGTCTTGTAGACA+TGG + chr8_1:74794770-74794789 None:intergenic 55.0%
GTCTACAAGACCACGCCACA+CGG - chr8_1:74794771-74794790 Msa1214280:CDS 55.0%
CACATGTCTCCGGTGAACCT+TGG + chr8_1:74794797-74794816 None:intergenic 55.0%
CAAGGTTCACCGGAGACATG+TGG - chr8_1:74794795-74794814 Msa1214280:CDS 55.0%
TCACCGGAGACATGTGGAGA+CGG - chr8_1:74794801-74794820 Msa1214280:CDS 55.0%
AACCCGTCTCCACATGTCTC+CGG + chr8_1:74794807-74794826 None:intergenic 55.0%
AGACGTCGGAGAGTAGTAGC+TGG - chr8_1:74794847-74794866 Msa1214280:CDS 55.0%
CTGGAAAGAGGGGAGTTCTG+AGG - chr8_1:74794866-74794885 Msa1214280:CDS 55.0%
!! GAGGGGAGTTCTGAGGATGA+AGG - chr8_1:74794873-74794892 Msa1214280:CDS 55.0%
!! GGGGAGTTCTGAGGATGAAG+GGG - chr8_1:74794875-74794894 Msa1214280:CDS 55.0%
!! GTTCTGAGGATGAAGGGGAG+AGG - chr8_1:74794880-74794899 Msa1214280:CDS 55.0%
GAGGATGAAGGGGAGAGGAA+AGG - chr8_1:74794885-74794904 Msa1214280:CDS 55.0%
GCAACTGCAGCACATGCAGG+AGG - chr8_1:74794606-74794625 Msa1214280:CDS 60.0%
CACCGGAGACATGTGGAGAC+GGG - chr8_1:74794802-74794821 Msa1214280:CDS 60.0%
GGAGACATGTGGAGACGGGT+TGG - chr8_1:74794806-74794825 Msa1214280:CDS 60.0%
!! GGTGGCGGAAGTAGCTGCTG+CGG + chr8_1:74794735-74794754 None:intergenic 65.0%
AAGACCACGCCACACGGCCA+AGG - chr8_1:74794777-74794796 Msa1214280:CDS 65.0%
TGAACCTTGGCCGTGTGGCG+TGG + chr8_1:74794784-74794803 None:intergenic 65.0%
GCCACACGGCCAAGGTTCAC+CGG - chr8_1:74794785-74794804 Msa1214280:CDS 65.0%
TCCGGTGAACCTTGGCCGTG+TGG + chr8_1:74794789-74794808 None:intergenic 65.0%
GGAAGTAGCTGCTGCGGCGG+CGG + chr8_1:74794729-74794748 None:intergenic 70.0%
GGCGGAAGTAGCTGCTGCGG+CGG + chr8_1:74794732-74794751 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 74792563 74795460 74792563 ID=Msa1214280;Name=Msa1214280
chr8_1 mRNA 74792563 74795460 74792563 ID=Msa1214280-mRNA-1;Parent=Msa1214280;Name=Msa1214280-mRNA-1;_AED=0.01;_eAED=0.01;_QI=200|1|1|1|1|1|4|507|434
chr8_1 exon 74792563 74793519 74792563 ID=Msa1214280-mRNA-1:exon:25687;Parent=Msa1214280-mRNA-1
chr8_1 exon 74793719 74793795 74793719 ID=Msa1214280-mRNA-1:exon:25686;Parent=Msa1214280-mRNA-1
chr8_1 exon 74794326 74794913 74794326 ID=Msa1214280-mRNA-1:exon:25685;Parent=Msa1214280-mRNA-1
chr8_1 exon 74795071 74795460 74795071 ID=Msa1214280-mRNA-1:exon:25684;Parent=Msa1214280-mRNA-1
chr8_1 five_prime_UTR 74795261 74795460 74795261 ID=Msa1214280-mRNA-1:five_prime_utr;Parent=Msa1214280-mRNA-1
chr8_1 CDS 74795071 74795260 74795071 ID=Msa1214280-mRNA-1:cds;Parent=Msa1214280-mRNA-1
chr8_1 CDS 74794326 74794913 74794326 ID=Msa1214280-mRNA-1:cds;Parent=Msa1214280-mRNA-1
chr8_1 CDS 74793719 74793795 74793719 ID=Msa1214280-mRNA-1:cds;Parent=Msa1214280-mRNA-1
chr8_1 CDS 74793070 74793519 74793070 ID=Msa1214280-mRNA-1:cds;Parent=Msa1214280-mRNA-1
chr8_1 three_prime_UTR 74792563 74793069 74792563 ID=Msa1214280-mRNA-1:three_prime_utr;Parent=Msa1214280-mRNA-1
Gene Sequence

>Msa1214280

ATGGCTTCACCATCTGAACTAGGCTTGGATTGCAAGCCACATAGCTACTCCATGTTACTGAAATCATTTGGAGAACAAAGTGATCAAAGCTACAAACTTGAAGAGTTTGTTTCTCGCTTAGAAGAAGAACGTCTCAAAATTGATGCTTTCAAACGTGAGCTTCCTCTCTGCATGCAACTTCTCACAAACGCGATGGAAGCATCGAAGCAGCAACTTCAAGCGTTTAGATCGAATCAAGGAGCAAAACCAATTCTAGAAGAATTCATACCAGTGAAGCAATTAGCATCATCAGAAACATTGGAAAAGACAACAAATAATAATGTATGTGATAAGGCAAATTGGATGACAAGTGCACAATTATGGAGCCAAACAAGTGAATTAGGAACAAAACAACAACAAAATTCCACAAAAGAAATTAATGATAACAATAACAATATTGGATTTAACATTAGTCCTAAACATAGAAATGGTGGAGCCTTTTTACCATTCTCAAAAGAAAGAAATAACTCCTCTTGTCAAGGACAAGGTCTTCCTGAACTAGCACTAGCTTCTACTCAAAAAGAAGAGGATAAGAAACATGCTGGAGAGGTAGAAAAAGGTAAAACAAATTCAGGGAATGAAGTTGATCATCAAGGAAAAGGGAGTCCAGTAGCATCATCACAAACTCAGACAACAAGCAACAATTCAAACCAAACTCATAGGAAAGCAAGAAGGTGTTGGTCACCAGACTTGCACCGTAGATTTGTTAATGCTCTTCAAATGCTTGGTGGATCTCAAGTGGCAACACCAAAACAGATAAGGGAGTTGATGAAGGTTGATGGTTTGACCAATGATGAAGTTAAAAGCCATCTGCAGAAATATAGGCTACACACAAGAAGACCAAGTCCAAGTGCACAAAATGGTGCACCAGCAGCACAGCTAGTAGTTTTAGGAGGAATATGGGTCCCACCAGAATATGCAACTGCAGCACATGCAGGAGGAACCCCTACTCTCTATGGTGGTCATCCTACTTCTCATCATCTCACTCTGCCACATTACTGCACTGCTCCAGGCCAAGATCAGTACTACACTACTGCACCGCCGCCGCAGCAGCTACTTCCGCCACCTCATCACATGCACCATGTCTACAAGACCACGCCACACGGCCAAGGTTCACCGGAGACATGTGGAGACGGGTTGGAGAGTATCGAAAATGGAAAGACGTCGGAGAGTAGTAGCTGGAAAGAGGGGAGTTCTGAGGATGAAGGGGAGAGGAAAGGGTTTGTTGAAGAGAGCAATGGGAGTGAAATCACTCTCAAATTTTAA
Protein sequence

>Msa1214280

MASPSELGLDCKPHSYSMLLKSFGEQSDQSYKLEEFVSRLEEERLKIDAFKRELPLCMQLLTNAMEASKQQLQAFRSNQGAKPILEEFIPVKQLASSETLEKTTNNNVCDKANWMTSAQLWSQTSELGTKQQQNSTKEINDNNNNIGFNISPKHRNGGAFLPFSKERNNSSCQGQGLPELALASTQKEEDKKHAGEVEKGKTNSGNEVDHQGKGSPVASSQTQTTSNNSNQTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSPSAQNGAPAAQLVVLGGIWVPPEYATAAHAGGTPTLYGGHPTSHHLTLPHYCTAPGQDQYYTTAPPPQQLLPPPHHMHHVYKTTPHGQGSPETCGDGLESIENGKTSESSSWKEGSSEDEGERKGFVEESNGSEITLKF*