AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1261460

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1261460 MtrunA17_Chr4g0062921 98.157 434 8 0 1 434 1 434 0.0 887
Msa1261460 MtrunA17_Chr4g0045361 38.649 370 171 12 4 328 6 364 1.87e-61 205
Msa1261460 MtrunA17_Chr5g0422621 40.469 341 140 16 30 350 12 309 1.00e-51 177
Msa1261460 MtrunA17_Chr1g0198601 35.714 336 151 8 29 328 2 308 1.43e-50 175
Msa1261460 MtrunA17_Chr5g0402631 34.539 304 146 8 6 305 31 285 1.97e-37 139
Msa1261460 MtrunA17_Chr1g0175081 43.023 86 45 1 219 300 2 87 2.87e-15 71.2
Msa1261460 MtrunA17_Chr1g0190301 48.235 85 42 1 226 310 166 248 3.24e-15 77.0
Msa1261460 MtrunA17_Chr7g0261911 47.727 88 44 1 226 313 253 338 6.67e-15 76.6
Msa1261460 MtrunA17_Chr2g0304841 37.383 107 59 3 232 331 210 315 8.52e-15 76.6
Msa1261460 MtrunA17_Chr4g0074411 49.296 71 35 1 232 302 198 267 3.79e-14 74.3
Msa1261460 MtrunA17_Chr7g0255711 52.381 63 29 1 231 293 87 148 1.34e-13 71.2
Msa1261460 MtrunA17_Chr1g0175091 43.478 92 47 1 211 297 229 320 1.52e-13 72.0
Msa1261460 MtrunA17_Chr1g0149841 54.839 62 27 1 234 295 190 250 6.33e-13 70.5
Msa1261460 MtrunA17_Chr7g0274471 56.667 60 26 0 235 294 218 277 8.06e-13 70.1
Msa1261460 MtrunA17_Chr5g0400241 52.308 65 29 2 230 293 305 368 1.11e-12 69.7
Msa1261460 MtrunA17_Chr4g0031961 40.404 99 52 3 218 316 119 210 1.12e-12 68.6
Msa1261460 MtrunA17_Chr4g0067981 52.941 68 31 1 232 299 212 278 1.23e-12 69.7
Msa1261460 MtrunA17_Chr5g0417521 53.448 58 27 0 232 289 12 69 1.31e-12 68.9
Msa1261460 MtrunA17_Chr2g0321461 55.172 58 26 0 232 289 42 99 2.32e-12 68.2
Msa1261460 MtrunA17_Chr2g0294911 43.333 90 44 2 232 315 208 296 2.53e-12 68.9
Msa1261460 MtrunA17_Chr4g0074401 46.479 71 37 1 232 302 200 269 3.59e-12 68.2
Msa1261460 MtrunA17_Chr7g0254981 55.000 60 27 0 235 294 50 109 4.40e-12 66.2
Msa1261460 MtrunA17_Chr6g0461641 44.444 81 40 2 232 308 39 118 4.45e-12 67.4
Msa1261460 MtrunA17_Chr1g0162931 61.224 49 19 0 240 288 23 71 5.93e-12 66.2
Msa1261460 MtrunA17_Chr2g0291021 50.746 67 33 0 235 301 49 115 7.37e-12 66.2
Msa1261460 MtrunA17_Chr1g0149831 51.613 62 26 1 234 295 127 184 7.48e-12 65.1
Msa1261460 MtrunA17_Chr1g0161431 46.753 77 38 2 227 301 192 267 8.27e-12 67.4
Msa1261460 MtrunA17_Chr2g0324891 43.056 72 40 1 221 292 147 217 9.59e-12 66.6
Msa1261460 MtrunA17_Chr1g0210911 59.184 49 20 0 240 288 27 75 9.95e-12 65.9
Msa1261460 MtrunA17_Chr3g0109981 46.479 71 38 0 231 301 270 340 1.16e-11 66.2
Msa1261460 MtrunA17_Chr4g0054981 44.776 67 36 1 234 300 309 374 1.27e-11 66.6
Msa1261460 MtrunA17_Chr8g0366281 46.575 73 39 0 229 301 167 239 1.39e-11 65.5
Msa1261460 MtrunA17_Chr5g0409731 54.098 61 26 1 235 293 25 85 1.51e-11 65.1
Msa1261460 MtrunA17_Chr4g0040481 48.387 62 31 1 231 292 154 214 1.55e-11 65.9
Msa1261460 MtrunA17_Chr7g0243081 57.143 49 21 0 240 288 76 124 1.78e-11 65.5
Msa1261460 MtrunA17_Chr6g0479431 49.231 65 33 0 234 298 201 265 1.82e-11 65.5
Msa1261460 MtrunA17_Chr1g0197171 58.182 55 23 0 235 289 44 98 1.86e-11 64.7
Msa1261460 MtrunA17_Chr3g0137101 46.377 69 36 1 234 302 197 264 2.70e-11 65.5
Msa1261460 MtrunA17_Chr2g0290991 58.182 55 23 0 235 289 39 93 2.97e-11 64.3
Msa1261460 MtrunA17_Chr4g0009901 45.588 68 36 1 234 301 167 233 3.45e-11 63.5
Msa1261460 MtrunA17_Chr8g0376881 53.333 60 27 1 234 293 208 266 3.67e-11 65.1
Msa1261460 MtrunA17_Chr1g0154261 38.095 105 60 1 227 331 118 217 3.68e-11 63.9
Msa1261460 MtrunA17_Chr2g0288601 63.043 46 17 0 240 285 76 121 4.33e-11 60.5
Msa1261460 MtrunA17_Chr5g0410741 51.724 58 28 0 231 288 215 272 8.32e-11 63.5
Msa1261460 MtrunA17_Chr7g0258551 50.847 59 29 0 230 288 207 265 8.63e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1261460 AT2G03500.1 50.959 469 158 20 1 434 1 432 4.64e-118 352
Msa1261460 AT1G68670.1 37.535 357 157 12 32 351 13 340 3.87e-61 202
Msa1261460 AT1G25550.1 39.394 330 132 13 18 316 2 294 4.77e-55 186
Msa1261460 AT3G25790.1 33.333 357 141 8 19 333 1 302 7.85e-45 160
Msa1261460 AT1G25550.2 37.966 295 119 11 18 285 2 259 8.33e-43 152
Msa1261460 AT4G37180.1 35.473 296 139 8 7 293 16 268 2.51e-39 145
Msa1261460 AT4G37180.2 34.797 296 148 8 7 293 16 275 5.18e-37 139
Msa1261460 AT4G37180.3 34.722 288 136 8 7 285 16 260 1.03e-34 130
Msa1261460 AT1G13300.1 71.765 85 22 1 234 316 180 264 6.84e-34 130
Msa1261460 AT1G49560.1 64.706 85 25 2 231 314 188 268 1.23e-27 112
Msa1261460 AT3G25790.2 49.533 107 52 1 181 285 140 246 1.30e-20 91.3
Msa1261460 AT3G25790.2 28.409 176 76 6 19 146 1 174 3.83e-11 63.5
Msa1261460 AT1G49560.2 76.364 55 13 0 231 285 188 242 1.57e-20 91.3
Msa1261460 AT4G28610.1 53.333 90 41 1 224 313 214 302 8.37e-19 88.6
Msa1261460 AT5G05090.1 34.932 146 75 4 224 366 70 198 9.18e-16 77.4
Msa1261460 AT2G20400.2 51.899 79 37 1 235 313 231 308 2.18e-14 75.1
Msa1261460 AT2G20400.1 51.899 79 36 1 235 313 231 307 3.38e-14 74.3
Msa1261460 AT3G46640.2 41.489 94 53 2 225 318 134 225 6.06e-14 72.8
Msa1261460 AT3G46640.1 41.489 94 53 2 225 318 134 225 6.06e-14 72.8
Msa1261460 AT2G40970.1 35.200 125 66 2 231 355 101 210 6.75e-14 71.6
Msa1261460 AT3G46640.3 34.507 142 65 3 203 318 86 225 7.78e-14 72.8
Msa1261460 AT3G10760.1 52.381 63 29 1 231 293 101 162 9.87e-14 72.4
Msa1261460 AT5G59570.2 49.231 65 32 1 229 293 135 198 1.83e-13 71.2
Msa1261460 AT5G59570.1 49.231 65 32 1 229 293 135 198 1.83e-13 71.2
Msa1261460 AT2G20570.1 36.486 148 62 5 163 292 76 209 3.87e-13 71.2
Msa1261460 AT2G06020.1 58.182 55 23 0 235 289 86 140 7.01e-13 69.3
Msa1261460 AT3G04030.1 55.172 58 26 0 232 289 42 99 1.58e-12 69.3
Msa1261460 AT5G29000.2 43.820 89 48 1 217 303 211 299 1.61e-12 69.3
Msa1261460 AT5G29000.1 43.820 89 48 1 217 303 168 256 1.73e-12 68.9
Msa1261460 AT5G29000.3 43.820 89 48 1 217 303 168 256 1.73e-12 68.9
Msa1261460 AT5G18240.2 56.897 58 25 0 232 289 42 99 1.82e-12 68.9
Msa1261460 AT5G18240.3 56.897 58 25 0 232 289 42 99 1.82e-12 68.9
Msa1261460 AT3G04030.3 55.172 58 26 0 232 289 42 99 1.84e-12 68.9
Msa1261460 AT2G02060.2 57.692 52 22 0 237 288 31 82 2.02e-12 67.4
Msa1261460 AT2G02060.1 57.692 52 22 0 237 288 31 82 2.02e-12 67.4
Msa1261460 AT5G18240.5 56.897 58 25 0 232 289 42 99 2.08e-12 68.9
Msa1261460 AT5G18240.1 56.897 58 25 0 232 289 42 99 2.13e-12 68.9
Msa1261460 AT5G18240.4 56.897 58 25 0 232 289 42 99 2.13e-12 68.9
Msa1261460 AT5G58080.1 50.000 62 30 1 232 293 191 251 2.99e-12 68.9
Msa1261460 AT2G38300.1 55.769 52 23 0 237 288 56 107 3.85e-12 67.8
Msa1261460 AT5G29000.4 43.678 87 47 1 217 301 211 297 4.83e-12 67.0
Msa1261460 AT3G13040.3 51.613 62 30 0 233 294 239 300 5.89e-12 67.8
Msa1261460 AT3G13040.1 51.613 62 30 0 233 294 239 300 5.89e-12 67.8
Msa1261460 AT3G13040.2 51.613 62 30 0 233 294 239 300 5.89e-12 67.8
Msa1261460 AT2G01760.3 50.769 65 31 1 234 298 134 197 6.08e-12 67.0
Msa1261460 AT2G01760.2 50.769 65 31 1 234 298 227 290 9.66e-12 67.0
Msa1261460 AT2G01760.1 50.769 65 31 1 234 298 199 262 9.98e-12 66.6
Msa1261460 AT2G01060.1 49.296 71 35 1 230 299 9 79 1.09e-11 65.9
Msa1261460 AT5G45580.1 56.364 55 24 0 235 289 7 61 1.20e-11 65.5
Msa1261460 AT5G45580.2 56.364 55 24 0 235 289 23 77 1.42e-11 65.5
Msa1261460 AT1G14600.1 55.769 52 23 0 237 288 25 76 1.81e-11 64.7
Msa1261460 AT3G16857.3 53.333 60 27 1 234 293 166 224 1.89e-11 66.6
Msa1261460 AT3G16857.1 53.333 60 27 1 234 293 236 294 2.40e-11 66.2
Msa1261460 AT3G16857.2 53.333 60 27 1 234 293 236 294 2.49e-11 66.2
Msa1261460 AT3G04450.3 51.667 60 29 0 235 294 238 297 2.51e-11 65.1
Msa1261460 AT3G04450.1 45.833 72 39 0 235 306 238 309 2.97e-11 65.5
Msa1261460 AT5G06800.3 51.667 60 29 0 235 294 192 251 3.10e-11 64.3
Msa1261460 AT3G04450.4 45.833 72 39 0 235 306 198 269 3.14e-11 65.1
Msa1261460 AT3G04450.2 45.833 72 39 0 235 306 198 269 3.14e-11 65.1
Msa1261460 AT2G42660.1 46.250 80 41 1 225 302 38 117 4.30e-11 63.5
Msa1261460 AT1G67710.2 47.887 71 37 0 223 293 116 186 6.91e-11 64.3
Msa1261460 AT1G67710.3 47.887 71 37 0 223 293 107 177 7.26e-11 64.3
Msa1261460 AT5G06800.1 51.667 60 29 0 235 294 192 251 8.44e-11 63.9
Msa1261460 AT5G06800.2 51.667 60 29 0 235 294 192 251 8.85e-11 63.9
Msa1261460 AT1G32240.2 51.724 58 28 0 231 288 209 266 9.12e-11 63.5
Msa1261460 AT1G32240.1 51.724 58 28 0 231 288 209 266 9.64e-11 63.5
Msa1261460 AT5G16560.1 54.545 55 25 0 234 288 218 272 9.73e-11 63.9
Msa1261460 AT5G42630.2 54.545 55 25 0 234 288 104 158 9.74e-11 62.0

Find 127 sgRNAs with CRISPR-Local

Find 177 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACAGAGAGAGATATATAAA+AGG 0.194245 8_2:-63834850 None:intergenic
ATCAACTCCCTTATCTGTTT+TGG 0.218983 8_2:-63836508 None:intergenic
AAATAATGTAATCATTATTA+AGG 0.242268 8_2:-63837231 None:intergenic
TAAATATTATTAGTTAGTTT+TGG 0.269732 8_2:+63837385 Msa1261460:three_prime_UTR
TTTAAGAAATTAGAGTATAG+AGG 0.274487 8_2:+63837257 Msa1261460:three_prime_UTR
AATGATAACAATAACAATAT+TGG 0.280258 8_2:+63835609 Msa1261460:CDS
TGGAGCCAAACAAGTGAATT+AGG 0.287496 8_2:+63835552 Msa1261460:CDS
TTGTTCCTAATTCACTTGTT+TGG 0.309917 8_2:-63835557 None:intergenic
TTCTTGCTTTCCTATGAGTT+TGG 0.321167 8_2:-63835881 None:intergenic
GGATGACAAGTGCACAATTA+TGG 0.322662 8_2:+63835532 Msa1261460:CDS
AGGGAGTTGATGAAGGTTGA+TGG 0.335126 8_2:+63836520 Msa1261460:CDS
AACTGTAGAAACTAATTTAT+CGG 0.335462 8_2:+63837700 Msa1261460:three_prime_UTR
TCTTGCTTTGTAGTTCTTGT+GGG 0.337014 8_2:-63834888 None:intergenic
GGTATGAATTCTTCTAGAAT+TGG 0.343936 8_2:-63835438 None:intergenic
GCTCCACCATTTCTATGTTT+AGG 0.345291 8_2:-63835645 None:intergenic
TGTGCTGCAGTTGCATATTC+TGG 0.345650 8_2:-63836869 None:intergenic
CATGCTGGAGAGGTAGAAAA+AGG 0.354964 8_2:+63835768 Msa1261460:CDS
GTTGTTATTGATAGAATTAA+AGG 0.355331 8_2:-63837602 None:intergenic
CAAGAGCAAAAGAGAGTGTT+TGG 0.366915 8_2:-63834913 None:intergenic
TTATTATTGAACAGAAATAT+AGG 0.370436 8_2:+63836762 Msa1261460:intron
TCCATGTTACTGAAATCATT+TGG 0.380670 8_2:+63835083 Msa1261460:CDS
ATGTATGTGATAAGGCAAAT+TGG 0.383284 8_2:+63835511 Msa1261460:CDS
AGAATCAGATTCTGACTCTT+GGG 0.388127 8_2:+63837547 Msa1261460:three_prime_UTR
GAAGTTGATCATCAAGGAAA+AGG 0.397063 8_2:+63835810 Msa1261460:CDS
AGGATGAAGGGGAGAGGAAA+GGG 0.399338 8_2:+63837158 Msa1261460:CDS
CCAAGTCCAAGTGCACAAAA+TGG 0.410271 8_2:+63836800 Msa1261460:CDS
AGGGGAGTTCTGAGGATGAA+GGG 0.415570 8_2:+63837146 Msa1261460:CDS
ACAGAGAGAGATATATAAAA+GGG 0.418460 8_2:-63834849 None:intergenic
AAGAATCAGATTCTGACTCT+TGG 0.420642 8_2:+63837546 Msa1261460:three_prime_UTR
ACAAATCTACGGTGCAAGTC+TGG 0.427901 8_2:-63835915 None:intergenic
GGAGGAACCCCTACTCTCTA+TGG 0.427913 8_2:+63836896 Msa1261460:CDS
TTGTTATTGATAGAATTAAA+GGG 0.428376 8_2:-63837601 None:intergenic
GATGATGCTAATTGCTTCAC+TGG 0.429693 8_2:-63835459 None:intergenic
GGGTTGGAGAGTATCGAAAA+TGG 0.429853 8_2:+63837094 Msa1261460:CDS
GTAGAAGCTAGTGCTAGTTC+AGG 0.432544 8_2:-63835723 None:intergenic
TTCTTGCTTTGTAGTTCTTG+TGG 0.437935 8_2:-63834889 None:intergenic
GGAAGTAGCTGCTGCGGCGG+CGG 0.442713 8_2:-63836998 None:intergenic
ACAATTCAAACCAAACTCAT+AGG 0.443130 8_2:+63835871 Msa1261460:CDS
GTTAATGCTCTTCAAATGCT+TGG 0.449127 8_2:+63835936 Msa1261460:CDS
GAGGGGAGTTCTGAGGATGA+AGG 0.449245 8_2:+63837145 Msa1261460:CDS
AAATAATAATGTATGTGATA+AGG 0.450078 8_2:+63835503 Msa1261460:CDS
ATTAGTCCTAAACATAGAAA+TGG 0.460300 8_2:+63835639 Msa1261460:CDS
GAGGATGAAGGGGAGAGGAA+AGG 0.465500 8_2:+63837157 Msa1261460:CDS
CACATGTCTCCGGTGAACCT+TGG 0.465967 8_2:-63837066 None:intergenic
GGCAACACCAAAACAGATAA+GGG 0.469043 8_2:+63836501 Msa1261460:CDS
AACCCGTCTCCACATGTCTC+CGG 0.479058 8_2:-63837076 None:intergenic
TTAAGAAATTAGAGTATAGA+GGG 0.479086 8_2:+63837258 Msa1261460:three_prime_UTR
GGGGAGTTCTGAGGATGAAG+GGG 0.481259 8_2:+63837147 Msa1261460:CDS
GGTTTGTTGAAGAGAGCAAT+GGG 0.485151 8_2:+63837179 Msa1261460:CDS
TGAGTTTGTGATGATGCTAC+TGG 0.486233 8_2:-63835837 None:intergenic
CAGTAGTGTAGTACTGATCT+TGG 0.489595 8_2:-63836973 None:intergenic
TTCACCATCTGAACTAGGCT+TGG 0.491547 8_2:+63835040 Msa1261460:CDS
CCACATTACTGCACTGCTCC+AGG 0.496026 8_2:+63836950 Msa1261460:CDS
ATATAAAAGGGAAGGTATGT+TGG 0.498558 8_2:-63834837 None:intergenic
GCCACACGGCCAAGGTTCAC+CGG 0.500443 8_2:+63837057 Msa1261460:CDS
ATTAGCATCATCAGAAACAT+TGG 0.504933 8_2:+63835470 Msa1261460:CDS
GTTCTGAGGATGAAGGGGAG+AGG 0.509113 8_2:+63837152 Msa1261460:CDS
CAAACCAAGATGCATAGGAT+TGG 0.511312 8_2:-63837291 None:intergenic
CAAATGCTTGGTGGATCTCA+AGG 0.514435 8_2:+63835948 Msa1261460:CDS
GATGACCACCATAGAGAGTA+GGG 0.520807 8_2:-63836904 None:intergenic
GAAGAGGATAAGAAACATGC+TGG 0.521576 8_2:+63835753 Msa1261460:CDS
GTGTAGTACTGATCTTGGCC+TGG 0.523675 8_2:-63836968 None:intergenic
TGGCAACACCAAAACAGATA+AGG 0.524534 8_2:+63836500 Msa1261460:CDS
GGCGGAAGTAGCTGCTGCGG+CGG 0.525740 8_2:-63837001 None:intergenic
GAGAGTAGTAGCTGGAAAGA+GGG 0.527047 8_2:+63837127 Msa1261460:CDS
AAGTTGATCATCAAGGAAAA+GGG 0.527682 8_2:+63835811 Msa1261460:CDS
TGCATGCAACTTCTCACAAA+CGG 0.528281 8_2:+63835203 Msa1261460:CDS
CTACTACAACGGTCCACATA+GGG 0.529377 8_2:+63837523 Msa1261460:three_prime_UTR
CTTGCTTTGTAGTTCTTGTG+GGG 0.530429 8_2:-63834887 None:intergenic
AGAGTGAGATGATGAGAAGT+AGG 0.531857 8_2:-63836926 None:intergenic
AAAACTACTAGCTGTGCTGC+TGG 0.531932 8_2:-63836827 None:intergenic
CAAGCGTTTAGATCGAATCA+AGG 0.533730 8_2:+63835408 Msa1261460:CDS
GGGTTTGTTGAAGAGAGCAA+TGG 0.536366 8_2:+63837178 Msa1261460:CDS
GAAGAGCATTAACAAATCTA+CGG 0.536877 8_2:-63835926 None:intergenic
ATATGACAAAATAGAAAAGA+AGG 0.537548 8_2:-63834957 None:intergenic
TCCAAATGATTTCAGTAACA+TGG 0.537583 8_2:-63835084 None:intergenic
CACCGGAGACATGTGGAGAC+GGG 0.540363 8_2:+63837074 Msa1261460:CDS
ATGGCTTCACCATCTGAACT+AGG 0.543239 8_2:+63835035 Msa1261460:CDS
CAATCCAAGCCTAGTTCAGA+TGG 0.544635 8_2:-63835044 None:intergenic
TGAAGTTAAAAGCCATCTGC+AGG 0.544962 8_2:+63836555 Msa1261460:CDS
GGAGAGTAGTAGCTGGAAAG+AGG 0.546618 8_2:+63837126 Msa1261460:CDS
AATGCTCTTCAAATGCTTGG+TGG 0.549954 8_2:+63835939 Msa1261460:CDS
GAATCTGATTCTTCCCTATG+TGG 0.550071 8_2:-63837536 None:intergenic
ACAGATAAGGGAGTTGATGA+AGG 0.551674 8_2:+63836513 Msa1261460:CDS
GAATCAGATTCTGACTCTTG+GGG 0.555795 8_2:+63837548 Msa1261460:three_prime_UTR
GGATGACCACCATAGAGAGT+AGG 0.564523 8_2:-63836905 None:intergenic
AGAGAGATATATAAAAGGGA+AGG 0.566951 8_2:-63834845 None:intergenic
GGATAAGAAACATGCTGGAG+AGG 0.570240 8_2:+63835758 Msa1261460:CDS
ACTACTACAACGGTCCACAT+AGG 0.571850 8_2:+63837522 Msa1261460:three_prime_UTR
AGACGTCGGAGAGTAGTAGC+TGG 0.573303 8_2:+63837119 Msa1261460:CDS
TCTAACAAACCAAGATGCAT+AGG 0.574823 8_2:-63837296 None:intergenic
TATGCAACTGCAGCACATGC+AGG 0.576335 8_2:+63836875 Msa1261460:CDS
TTGCTTTGTAGTTCTTGTGG+GGG 0.576354 8_2:-63834886 None:intergenic
GAGAGAGAATTACCTGCAGA+TGG 0.576980 8_2:-63836567 None:intergenic
TCACCGGAGACATGTGGAGA+CGG 0.576988 8_2:+63837073 Msa1261460:CDS
GGGAATGAAGTTGATCATCA+AGG 0.578253 8_2:+63835804 Msa1261460:CDS
AGTCCTAAACATAGAAATGG+TGG 0.579197 8_2:+63835642 Msa1261460:CDS
GGAGACATGTGGAGACGGGT+TGG 0.587274 8_2:+63837078 Msa1261460:CDS
AGAAATAACTCCTCTTGTCA+AGG 0.588185 8_2:+63835690 Msa1261460:CDS
GCTGCAGTTGCATATTCTGG+TGG 0.594788 8_2:-63836866 None:intergenic
TGAACCTTGGCCGTGTGGCG+TGG 0.595965 8_2:-63837053 None:intergenic
ATAGGAAAGCAAGAAGGTGT+TGG 0.602381 8_2:+63835889 Msa1261460:CDS
AAGACCACGCCACACGGCCA+AGG 0.603883 8_2:+63837049 Msa1261460:CDS
CTGCAGTTGCATATTCTGGT+GGG 0.605931 8_2:-63836865 None:intergenic
TCTGTTATGTACTACTACAA+CGG 0.613011 8_2:+63837512 Msa1261460:three_prime_UTR
AGTAACATGGAGTAGCTATG+TGG 0.617118 8_2:-63835071 None:intergenic
TGGTGCATGTGATGAGGTGG+CGG 0.620813 8_2:-63837019 None:intergenic
AACTCCTCTTGTCAAGGACA+AGG 0.622383 8_2:+63835696 Msa1261460:CDS
GTGGCGTGGTCTTGTAGACA+TGG 0.624325 8_2:-63837039 None:intergenic
CTGGAAAGAGGGGAGTTCTG+AGG 0.624534 8_2:+63837138 Msa1261460:CDS
GGTGGCGGAAGTAGCTGCTG+CGG 0.626284 8_2:-63837004 None:intergenic
AGAGTAGTAGCTGGAAAGAG+GGG 0.629458 8_2:+63837128 Msa1261460:CDS
AAGACCTTGTCCTTGACAAG+AGG 0.632597 8_2:-63835700 None:intergenic
AAACTCATAGGAAAGCAAGA+AGG 0.642113 8_2:+63835883 Msa1261460:CDS
TCCGGTGAACCTTGGCCGTG+TGG 0.647253 8_2:-63837058 None:intergenic
GTCTACAAGACCACGCCACA+CGG 0.648472 8_2:+63837043 Msa1261460:CDS
ACATGGTGCATGTGATGAGG+TGG 0.655489 8_2:-63837022 None:intergenic
CCTGGAGCAGTGCAGTAATG+TGG 0.657609 8_2:-63836950 None:intergenic
TTAGTTTCTACAGTTACACG+TGG 0.660459 8_2:-63837692 None:intergenic
GTGAGAAGTTGCATGCAGAG+AGG 0.660628 8_2:-63835197 None:intergenic
CAAGGTTCACCGGAGACATG+TGG 0.663048 8_2:+63837067 Msa1261460:CDS
TGACAAAATAGAAAAGAAGG+TGG 0.666587 8_2:-63834954 None:intergenic
TAGACATGGTGCATGTGATG+AGG 0.673422 8_2:-63837025 None:intergenic
GCAACTGCAGCACATGCAGG+AGG 0.687455 8_2:+63836878 Msa1261460:CDS
TATCGAAAATGGAAAGACGT+CGG 0.689251 8_2:+63837105 Msa1261460:CDS
GGAACCCCTACTCTCTATGG+TGG 0.690464 8_2:+63836899 Msa1261460:CDS
ATGACCACCATAGAGAGTAG+GGG 0.721767 8_2:-63836903 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACAATTATAGTAATTTAAA+TGG + chr8_2:63836225-63836244 Msa1261460:intron 10.0%
!! ACAATTATAGTAATTTAAAT+GGG + chr8_2:63836226-63836245 Msa1261460:intron 10.0%
!!! ATCTCTTATTTATTTTTTTT+GGG - chr8_2:63836325-63836344 None:intergenic 10.0%
!! AAATAATGTAATCATTATTA+AGG - chr8_2:63837234-63837253 None:intergenic 10.0%
!!! TAAATATTATTAGTTAGTTT+TGG + chr8_2:63837385-63837404 Msa1261460:three_prime_UTR 10.0%
!! GTTACATATAAAAGAAAAAA+AGG - chr8_2:63835244-63835263 None:intergenic 15.0%
!! AAATAATAATGTATGTGATA+AGG + chr8_2:63835503-63835522 Msa1261460:CDS 15.0%
!! AATGATAACAATAACAATAT+TGG + chr8_2:63835609-63835628 Msa1261460:CDS 15.0%
!! ATACTATAAAAAAGAATAGA+TGG + chr8_2:63836070-63836089 Msa1261460:intron 15.0%
!!! CATCTCTTATTTATTTTTTT+TGG - chr8_2:63836326-63836345 None:intergenic 15.0%
!! AAATTTAGTCAAATGTTATT+AGG + chr8_2:63836348-63836367 Msa1261460:intron 15.0%
!! TTATTATTGAACAGAAATAT+AGG + chr8_2:63836762-63836781 Msa1261460:intron 15.0%
!!! TTGTTATTGATAGAATTAAA+GGG - chr8_2:63837604-63837623 None:intergenic 15.0%
!! ATATGACAAAATAGAAAAGA+AGG - chr8_2:63834960-63834979 None:intergenic 20.0%
!!! GTTATTTAGTTGTTTTAACA+AGG + chr8_2:63835011-63835030 Msa1261460:five_prime_UTR 20.0%
!! ACATATAAAAGAAAAAAAGG+TGG - chr8_2:63835241-63835260 None:intergenic 20.0%
!!! GTTATCATTAATTTCTTTTG+TGG - chr8_2:63835598-63835617 None:intergenic 20.0%
!!! TTATTTCTTTCTTTTGAGAA+TGG - chr8_2:63835678-63835697 None:intergenic 20.0%
!! AAAAAGGTAAAACAAATTCA+GGG + chr8_2:63835784-63835803 Msa1261460:CDS 20.0%
!! TGCAAAAGAAACATATAATA+AGG - chr8_2:63836043-63836062 None:intergenic 20.0%
!! GTTTCTTATAAAATAGTCTT+AGG + chr8_2:63836122-63836141 Msa1261460:intron 20.0%
!! ATATGTTTGTTTAATTGTAG+TGG + chr8_2:63836480-63836499 Msa1261460:intron 20.0%
!!! ATCACTCTCAAATTTTAATT+AGG + chr8_2:63837208-63837227 Msa1261460:exon 20.0%
!! TTTAAGAAATTAGAGTATAG+AGG + chr8_2:63837257-63837276 Msa1261460:three_prime_UTR 20.0%
!! TTAAGAAATTAGAGTATAGA+GGG + chr8_2:63837258-63837277 Msa1261460:three_prime_UTR 20.0%
!!! GTTGTTATTGATAGAATTAA+AGG - chr8_2:63837605-63837624 None:intergenic 20.0%
!!! AGTTTCAACTTTAGTATTTT+TGG + chr8_2:63837652-63837671 Msa1261460:three_prime_UTR 20.0%
! ACAGAGAGAGATATATAAAA+GGG - chr8_2:63834852-63834871 None:intergenic 25.0%
!!! TTAGTTGTTTTAACAAGGAA+TGG + chr8_2:63835016-63835035 Msa1261460:exon 25.0%
! ATTAGTCCTAAACATAGAAA+TGG + chr8_2:63835639-63835658 Msa1261460:CDS 25.0%
!!! TTCTTTTGAGAATGGTAAAA+AGG - chr8_2:63835670-63835689 None:intergenic 25.0%
! GAAAAAGGTAAAACAAATTC+AGG + chr8_2:63835783-63835802 Msa1261460:CDS 25.0%
! TAATTGATACTAGTGGTATT+GGG - chr8_2:63836180-63836199 None:intergenic 25.0%
! ATAATTGATACTAGTGGTAT+TGG - chr8_2:63836181-63836200 None:intergenic 25.0%
! AATACCACTAGTATCAATTA+TGG + chr8_2:63836180-63836199 Msa1261460:intron 25.0%
!! CTTTTGTATTTTACTTTGCT+TGG + chr8_2:63836698-63836717 Msa1261460:intron 25.0%
!!! AGTTTTGGATGAATTTTATG+TGG + chr8_2:63837400-63837419 Msa1261460:three_prime_UTR 25.0%
! ATATAAAAGGGAAGGTATGT+TGG - chr8_2:63834840-63834859 None:intergenic 30.0%
AGAGAGATATATAAAAGGGA+AGG - chr8_2:63834848-63834867 None:intergenic 30.0%
GACAGAGAGAGATATATAAA+AGG - chr8_2:63834853-63834872 None:intergenic 30.0%
TGACAAAATAGAAAAGAAGG+TGG - chr8_2:63834957-63834976 None:intergenic 30.0%
TCCATGTTACTGAAATCATT+TGG + chr8_2:63835083-63835102 Msa1261460:CDS 30.0%
TCCAAATGATTTCAGTAACA+TGG - chr8_2:63835087-63835106 None:intergenic 30.0%
TGTCAGATAAGATTTGAACT+CGG - chr8_2:63835300-63835319 None:intergenic 30.0%
!! GGTATGAATTCTTCTAGAAT+TGG - chr8_2:63835441-63835460 None:intergenic 30.0%
ATTAGCATCATCAGAAACAT+TGG + chr8_2:63835470-63835489 Msa1261460:CDS 30.0%
ATGTATGTGATAAGGCAAAT+TGG + chr8_2:63835511-63835530 Msa1261460:CDS 30.0%
TTGTTCCTAATTCACTTGTT+TGG - chr8_2:63835560-63835579 None:intergenic 30.0%
! AAGTTGATCATCAAGGAAAA+GGG + chr8_2:63835811-63835830 Msa1261460:CDS 30.0%
ACAATTCAAACCAAACTCAT+AGG + chr8_2:63835871-63835890 Msa1261460:CDS 30.0%
!! GAAGAGCATTAACAAATCTA+CGG - chr8_2:63835929-63835948 None:intergenic 30.0%
!!! ATGGCTTTTAACTTCATCAT+TGG - chr8_2:63836551-63836570 None:intergenic 30.0%
TAATTCTCTCTCTCAGTTTA+AGG + chr8_2:63836578-63836597 Msa1261460:intron 30.0%
!!! TAGTAGTTTTAGGAGGAATA+TGG + chr8_2:63836840-63836859 Msa1261460:CDS 30.0%
!!! AGTAGTTTTAGGAGGAATAT+GGG + chr8_2:63836841-63836860 Msa1261460:CDS 30.0%
!! ATATTGCATGCAGTTTTTAG+TGG + chr8_2:63837437-63837456 Msa1261460:three_prime_UTR 30.0%
!!! TATTGCATGCAGTTTTTAGT+GGG + chr8_2:63837438-63837457 Msa1261460:three_prime_UTR 30.0%
!!! AGTTTTTAGTGGGGTTAAAA+AGG + chr8_2:63837448-63837467 Msa1261460:three_prime_UTR 30.0%
TTAAAAAGGACAGAAAAGTG+AGG + chr8_2:63837462-63837481 Msa1261460:three_prime_UTR 30.0%
TCTGTTATGTACTACTACAA+CGG + chr8_2:63837512-63837531 Msa1261460:three_prime_UTR 30.0%
TCTTGCTTTGTAGTTCTTGT+GGG - chr8_2:63834891-63834910 None:intergenic 35.0%
TTCTTGCTTTGTAGTTCTTG+TGG - chr8_2:63834892-63834911 None:intergenic 35.0%
AGTCCTAAACATAGAAATGG+TGG + chr8_2:63835642-63835661 Msa1261460:CDS 35.0%
AGAAATAACTCCTCTTGTCA+AGG + chr8_2:63835690-63835709 Msa1261460:CDS 35.0%
AGCTTCTACTCAAAAAGAAG+AGG + chr8_2:63835737-63835756 Msa1261460:CDS 35.0%
! GAAGTTGATCATCAAGGAAA+AGG + chr8_2:63835810-63835829 Msa1261460:CDS 35.0%
TTCTTGCTTTCCTATGAGTT+TGG - chr8_2:63835884-63835903 None:intergenic 35.0%
AAACTCATAGGAAAGCAAGA+AGG + chr8_2:63835883-63835902 Msa1261460:CDS 35.0%
GTTAATGCTCTTCAAATGCT+TGG + chr8_2:63835936-63835955 Msa1261460:CDS 35.0%
AGAGCCATAATTGATACTAG+TGG - chr8_2:63836187-63836206 None:intergenic 35.0%
AGAAGCAGAGATGTGAAATT+AGG + chr8_2:63836291-63836310 Msa1261460:intron 35.0%
! ATCAACTCCCTTATCTGTTT+TGG - chr8_2:63836511-63836530 None:intergenic 35.0%
AGTACAGCAACAAACAACAA+AGG - chr8_2:63836641-63836660 None:intergenic 35.0%
AGTTCGTTATAAGTTGTCAG+AGG - chr8_2:63836680-63836699 None:intergenic 35.0%
TATCGAAAATGGAAAGACGT+CGG + chr8_2:63837105-63837124 Msa1261460:CDS 35.0%
! TTTTCCAATCCTATGCATCT+TGG + chr8_2:63837287-63837306 Msa1261460:three_prime_UTR 35.0%
TCTAACAAACCAAGATGCAT+AGG - chr8_2:63837299-63837318 None:intergenic 35.0%
! TTGGATGAATTTTATGTGGC+AGG + chr8_2:63837404-63837423 Msa1261460:three_prime_UTR 35.0%
!!! ATTGCATGCAGTTTTTAGTG+GGG + chr8_2:63837439-63837458 Msa1261460:three_prime_UTR 35.0%
AAGAATCAGATTCTGACTCT+TGG + chr8_2:63837546-63837565 Msa1261460:three_prime_UTR 35.0%
AGAATCAGATTCTGACTCTT+GGG + chr8_2:63837547-63837566 Msa1261460:three_prime_UTR 35.0%
TTAGTTTCTACAGTTACACG+TGG - chr8_2:63837695-63837714 None:intergenic 35.0%
TTGCTTTGTAGTTCTTGTGG+GGG - chr8_2:63834889-63834908 None:intergenic 40.0%
CTTGCTTTGTAGTTCTTGTG+GGG - chr8_2:63834890-63834909 None:intergenic 40.0%
!! CAAGAGCAAAAGAGAGTGTT+TGG - chr8_2:63834916-63834935 None:intergenic 40.0%
AGTAACATGGAGTAGCTATG+TGG - chr8_2:63835074-63835093 None:intergenic 40.0%
TGCATGCAACTTCTCACAAA+CGG + chr8_2:63835203-63835222 Msa1261460:CDS 40.0%
CAAGCGTTTAGATCGAATCA+AGG + chr8_2:63835408-63835427 Msa1261460:CDS 40.0%
GATGATGCTAATTGCTTCAC+TGG - chr8_2:63835462-63835481 None:intergenic 40.0%
GGATGACAAGTGCACAATTA+TGG + chr8_2:63835532-63835551 Msa1261460:CDS 40.0%
TGGAGCCAAACAAGTGAATT+AGG + chr8_2:63835552-63835571 Msa1261460:CDS 40.0%
GCTCCACCATTTCTATGTTT+AGG - chr8_2:63835648-63835667 None:intergenic 40.0%
GAAGAGGATAAGAAACATGC+TGG + chr8_2:63835753-63835772 Msa1261460:CDS 40.0%
! GGGAATGAAGTTGATCATCA+AGG + chr8_2:63835804-63835823 Msa1261460:CDS 40.0%
! TGAGTTTGTGATGATGCTAC+TGG - chr8_2:63835840-63835859 None:intergenic 40.0%
! ATAGGAAAGCAAGAAGGTGT+TGG + chr8_2:63835889-63835908 Msa1261460:CDS 40.0%
AATGCTCTTCAAATGCTTGG+TGG + chr8_2:63835939-63835958 Msa1261460:CDS 40.0%
TGGCAACACCAAAACAGATA+AGG + chr8_2:63836500-63836519 Msa1261460:CDS 40.0%
GGCAACACCAAAACAGATAA+GGG + chr8_2:63836501-63836520 Msa1261460:CDS 40.0%
!! ACAGATAAGGGAGTTGATGA+AGG + chr8_2:63836513-63836532 Msa1261460:CDS 40.0%
TGAAGTTAAAAGCCATCTGC+AGG + chr8_2:63836555-63836574 Msa1261460:CDS 40.0%
AGAGTGAGATGATGAGAAGT+AGG - chr8_2:63836929-63836948 None:intergenic 40.0%
!! CAGTAGTGTAGTACTGATCT+TGG - chr8_2:63836976-63836995 None:intergenic 40.0%
!! GGTTTGTTGAAGAGAGCAAT+GGG + chr8_2:63837179-63837198 Msa1261460:CDS 40.0%
CAAACCAAGATGCATAGGAT+TGG - chr8_2:63837294-63837313 None:intergenic 40.0%
GAATCTGATTCTTCCCTATG+TGG - chr8_2:63837539-63837558 None:intergenic 40.0%
GAATCAGATTCTGACTCTTG+GGG + chr8_2:63837548-63837567 Msa1261460:three_prime_UTR 40.0%
ATGGCTTCACCATCTGAACT+AGG + chr8_2:63835035-63835054 Msa1261460:CDS 45.0%
TTCACCATCTGAACTAGGCT+TGG + chr8_2:63835040-63835059 Msa1261460:CDS 45.0%
CAATCCAAGCCTAGTTCAGA+TGG - chr8_2:63835047-63835066 None:intergenic 45.0%
! TCGTGCACAATTTTCAGCGA+TGG + chr8_2:63835365-63835384 Msa1261460:intron 45.0%
AACTCCTCTTGTCAAGGACA+AGG + chr8_2:63835696-63835715 Msa1261460:CDS 45.0%
AAGACCTTGTCCTTGACAAG+AGG - chr8_2:63835703-63835722 None:intergenic 45.0%
GTAGAAGCTAGTGCTAGTTC+AGG - chr8_2:63835726-63835745 None:intergenic 45.0%
GGATAAGAAACATGCTGGAG+AGG + chr8_2:63835758-63835777 Msa1261460:CDS 45.0%
CATGCTGGAGAGGTAGAAAA+AGG + chr8_2:63835768-63835787 Msa1261460:CDS 45.0%
ACAAATCTACGGTGCAAGTC+TGG - chr8_2:63835918-63835937 None:intergenic 45.0%
! CAAATGCTTGGTGGATCTCA+AGG + chr8_2:63835948-63835967 Msa1261460:CDS 45.0%
!! AGGGAGTTGATGAAGGTTGA+TGG + chr8_2:63836520-63836539 Msa1261460:CDS 45.0%
GAGAGAGAATTACCTGCAGA+TGG - chr8_2:63836570-63836589 None:intergenic 45.0%
! CCATTTTGTGCACTTGGACT+TGG - chr8_2:63836803-63836822 None:intergenic 45.0%
CCAAGTCCAAGTGCACAAAA+TGG + chr8_2:63836800-63836819 Msa1261460:CDS 45.0%
AAAACTACTAGCTGTGCTGC+TGG - chr8_2:63836830-63836849 None:intergenic 45.0%
! GCAGCACAGCTAGTAGTTTT+AGG + chr8_2:63836830-63836849 Msa1261460:CDS 45.0%
!!! GCACAGCTAGTAGTTTTAGG+AGG + chr8_2:63836833-63836852 Msa1261460:CDS 45.0%
CTGCAGTTGCATATTCTGGT+GGG - chr8_2:63836868-63836887 None:intergenic 45.0%
TGTGCTGCAGTTGCATATTC+TGG - chr8_2:63836872-63836891 None:intergenic 45.0%
ATGACCACCATAGAGAGTAG+GGG - chr8_2:63836906-63836925 None:intergenic 45.0%
GATGACCACCATAGAGAGTA+GGG - chr8_2:63836907-63836926 None:intergenic 45.0%
TAGACATGGTGCATGTGATG+AGG - chr8_2:63837028-63837047 None:intergenic 45.0%
!! GGGTTGGAGAGTATCGAAAA+TGG + chr8_2:63837094-63837113 Msa1261460:CDS 45.0%
GAGAGTAGTAGCTGGAAAGA+GGG + chr8_2:63837127-63837146 Msa1261460:CDS 45.0%
AGAGTAGTAGCTGGAAAGAG+GGG + chr8_2:63837128-63837147 Msa1261460:CDS 45.0%
!! GGGTTTGTTGAAGAGAGCAA+TGG + chr8_2:63837178-63837197 Msa1261460:CDS 45.0%
ACTACTACAACGGTCCACAT+AGG + chr8_2:63837522-63837541 Msa1261460:three_prime_UTR 45.0%
CTACTACAACGGTCCACATA+GGG + chr8_2:63837523-63837542 Msa1261460:three_prime_UTR 45.0%
! TTCTGACTCTTGGGGTTTTC+TGG + chr8_2:63837556-63837575 Msa1261460:three_prime_UTR 45.0%
TGTAGTTCTTGTGGGGGAGA+GGG - chr8_2:63834883-63834902 None:intergenic 50.0%
TTGTAGTTCTTGTGGGGGAG+AGG - chr8_2:63834884-63834903 None:intergenic 50.0%
GTGAGAAGTTGCATGCAGAG+AGG - chr8_2:63835200-63835219 None:intergenic 50.0%
TGAACTCGGTCTCTTGAGAG+CGG - chr8_2:63835286-63835305 None:intergenic 50.0%
! GGTGCACCATTTTGTGCACT+TGG - chr8_2:63836809-63836828 None:intergenic 50.0%
GCTGCAGTTGCATATTCTGG+TGG - chr8_2:63836869-63836888 None:intergenic 50.0%
TATGCAACTGCAGCACATGC+AGG + chr8_2:63836875-63836894 Msa1261460:CDS 50.0%
GGATGACCACCATAGAGAGT+AGG - chr8_2:63836908-63836927 None:intergenic 50.0%
!! GTGTAGTACTGATCTTGGCC+TGG - chr8_2:63836971-63836990 None:intergenic 50.0%
ACATGGTGCATGTGATGAGG+TGG - chr8_2:63837025-63837044 None:intergenic 50.0%
GGAGAGTAGTAGCTGGAAAG+AGG + chr8_2:63837126-63837145 Msa1261460:CDS 50.0%
!! AGGGGAGTTCTGAGGATGAA+GGG + chr8_2:63837146-63837165 Msa1261460:CDS 50.0%
AGGATGAAGGGGAGAGGAAA+GGG + chr8_2:63837158-63837177 Msa1261460:CDS 50.0%
GGAGGAACCCCTACTCTCTA+TGG + chr8_2:63836896-63836915 Msa1261460:CDS 55.0%
GGAACCCCTACTCTCTATGG+TGG + chr8_2:63836899-63836918 Msa1261460:CDS 55.0%
CCTGGAGCAGTGCAGTAATG+TGG - chr8_2:63836953-63836972 None:intergenic 55.0%
CCACATTACTGCACTGCTCC+AGG + chr8_2:63836950-63836969 Msa1261460:CDS 55.0%
TGGTGCATGTGATGAGGTGG+CGG - chr8_2:63837022-63837041 None:intergenic 55.0%
!! GTGGCGTGGTCTTGTAGACA+TGG - chr8_2:63837042-63837061 None:intergenic 55.0%
GTCTACAAGACCACGCCACA+CGG + chr8_2:63837043-63837062 Msa1261460:CDS 55.0%
CACATGTCTCCGGTGAACCT+TGG - chr8_2:63837069-63837088 None:intergenic 55.0%
CAAGGTTCACCGGAGACATG+TGG + chr8_2:63837067-63837086 Msa1261460:CDS 55.0%
TCACCGGAGACATGTGGAGA+CGG + chr8_2:63837073-63837092 Msa1261460:CDS 55.0%
AACCCGTCTCCACATGTCTC+CGG - chr8_2:63837079-63837098 None:intergenic 55.0%
AGACGTCGGAGAGTAGTAGC+TGG + chr8_2:63837119-63837138 Msa1261460:CDS 55.0%
CTGGAAAGAGGGGAGTTCTG+AGG + chr8_2:63837138-63837157 Msa1261460:CDS 55.0%
!! GAGGGGAGTTCTGAGGATGA+AGG + chr8_2:63837145-63837164 Msa1261460:CDS 55.0%
!! GGGGAGTTCTGAGGATGAAG+GGG + chr8_2:63837147-63837166 Msa1261460:CDS 55.0%
!! GTTCTGAGGATGAAGGGGAG+AGG + chr8_2:63837152-63837171 Msa1261460:CDS 55.0%
GAGGATGAAGGGGAGAGGAA+AGG + chr8_2:63837157-63837176 Msa1261460:CDS 55.0%
GCAACTGCAGCACATGCAGG+AGG + chr8_2:63836878-63836897 Msa1261460:CDS 60.0%
CACCGGAGACATGTGGAGAC+GGG + chr8_2:63837074-63837093 Msa1261460:CDS 60.0%
GGAGACATGTGGAGACGGGT+TGG + chr8_2:63837078-63837097 Msa1261460:CDS 60.0%
!! GGTGGCGGAAGTAGCTGCTG+CGG - chr8_2:63837007-63837026 None:intergenic 65.0%
AAGACCACGCCACACGGCCA+AGG + chr8_2:63837049-63837068 Msa1261460:CDS 65.0%
TGAACCTTGGCCGTGTGGCG+TGG - chr8_2:63837056-63837075 None:intergenic 65.0%
GCCACACGGCCAAGGTTCAC+CGG + chr8_2:63837057-63837076 Msa1261460:CDS 65.0%
TCCGGTGAACCTTGGCCGTG+TGG - chr8_2:63837061-63837080 None:intergenic 65.0%
GGAAGTAGCTGCTGCGGCGG+CGG - chr8_2:63837001-63837020 None:intergenic 70.0%
GGCGGAAGTAGCTGCTGCGG+CGG - chr8_2:63837004-63837023 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 63834835 63837721 63834835 ID=Msa1261460;Name=Msa1261460
chr8_2 mRNA 63834835 63837721 63834835 ID=Msa1261460-mRNA-1;Parent=Msa1261460;Name=Msa1261460-mRNA-1;_AED=0.02;_eAED=0.02;_QI=200|1|1|1|1|1|4|496|434
chr8_2 exon 63834835 63835224 63834835 ID=Msa1261460-mRNA-1:exon:20588;Parent=Msa1261460-mRNA-1
chr8_2 exon 63835382 63835969 63835382 ID=Msa1261460-mRNA-1:exon:20589;Parent=Msa1261460-mRNA-1
chr8_2 exon 63836500 63836576 63836500 ID=Msa1261460-mRNA-1:exon:20590;Parent=Msa1261460-mRNA-1
chr8_2 exon 63836776 63837721 63836776 ID=Msa1261460-mRNA-1:exon:20591;Parent=Msa1261460-mRNA-1
chr8_2 five_prime_UTR 63834835 63835034 63834835 ID=Msa1261460-mRNA-1:five_prime_utr;Parent=Msa1261460-mRNA-1
chr8_2 CDS 63835035 63835224 63835035 ID=Msa1261460-mRNA-1:cds;Parent=Msa1261460-mRNA-1
chr8_2 CDS 63835382 63835969 63835382 ID=Msa1261460-mRNA-1:cds;Parent=Msa1261460-mRNA-1
chr8_2 CDS 63836500 63836576 63836500 ID=Msa1261460-mRNA-1:cds;Parent=Msa1261460-mRNA-1
chr8_2 CDS 63836776 63837225 63836776 ID=Msa1261460-mRNA-1:cds;Parent=Msa1261460-mRNA-1
chr8_2 three_prime_UTR 63837226 63837721 63837226 ID=Msa1261460-mRNA-1:three_prime_utr;Parent=Msa1261460-mRNA-1
Gene Sequence

>Msa1261460

ATGGCTTCACCATCTGAACTAGGCTTGGATTGCAAGCCACATAGCTACTCCATGTTACTGAAATCATTTGGAGAACAAAGTGATCAAAGCTACAAACTTGAAGAGTTTGTTTCTCGCTTAGAAGAAGAACGTCTCAAAATTGATGCTTTCAAACGTGAGCTTCCTCTCTGCATGCAACTTCTCACAAACGCGATGGAAGCATCGAAGCAGCAACTTCAAGCGTTTAGATCGAATCAAGGAGCAAAACCAATTCTAGAAGAATTCATACCAGTGAAGCAATTAGCATCATCAGAAACATTGGAAAAGACAACAAATAATAATGTATGTGATAAGGCAAATTGGATGACAAGTGCACAATTATGGAGCCAAACAAGTGAATTAGGAACAAAACAACAACAAAATTCCACAAAAGAAATTAATGATAACAATAACAATATTGGATTTAACATTAGTCCTAAACATAGAAATGGTGGAGCCTTTTTACCATTCTCAAAAGAAAGAAATAACTCCTCTTGTCAAGGACAAGGTCTTCCTGAACTAGCACTAGCTTCTACTCAAAAAGAAGAGGATAAGAAACATGCTGGAGAGGTAGAAAAAGGTAAAACAAATTCAGGGAATGAAGTTGATCATCAAGGAAAAGGGAGTCCAGTAGCATCATCACAAACTCAGACAACAAGCAACAATTCAAACCAAACTCATAGGAAAGCAAGAAGGTGTTGGTCACCAGACTTGCACCGTAGATTTGTTAATGCTCTTCAAATGCTTGGTGGATCTCAAGTGGCAACACCAAAACAGATAAGGGAGTTGATGAAGGTTGATGGTTTGACCAATGATGAAGTTAAAAGCCATCTGCAGAAATATAGGCTACACACAAGAAGACCAAGTCCAAGTGCACAAAATGGTGCACCAGCAGCACAGCTAGTAGTTTTAGGAGGAATATGGGTCCCACCAGAATATGCAACTGCAGCACATGCAGGAGGAACCCCTACTCTCTATGGTGGTCATCCTACTTCTCATCATCTCACTCTGCCACATTACTGCACTGCTCCAGGCCAAGATCAGTACTACACTACTGCACCGCCGCCGCAGCAGCTACTTCCGCCACCTCATCACATGCACCATGTCTACAAGACCACGCCACACGGCCAAGGTTCACCGGAGACATGTGGAGACGGGTTGGAGAGTATCGAAAATGGAAAGACGTCGGAGAGTAGTAGCTGGAAAGAGGGGAGTTCTGAGGATGAAGGGGAGAGGAAAGGGTTTGTTGAAGAGAGCAATGGGAGTGAAATCACTCTCAAATTTTAA
Protein sequence

>Msa1261460

MASPSELGLDCKPHSYSMLLKSFGEQSDQSYKLEEFVSRLEEERLKIDAFKRELPLCMQLLTNAMEASKQQLQAFRSNQGAKPILEEFIPVKQLASSETLEKTTNNNVCDKANWMTSAQLWSQTSELGTKQQQNSTKEINDNNNNIGFNISPKHRNGGAFLPFSKERNNSSCQGQGLPELALASTQKEEDKKHAGEVEKGKTNSGNEVDHQGKGSPVASSQTQTTSNNSNQTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSPSAQNGAPAAQLVVLGGIWVPPEYATAAHAGGTPTLYGGHPTSHHLTLPHYCTAPGQDQYYTTAPPPQQLLPPPHHMHHVYKTTPHGQGSPETCGDGLESIENGKTSESSSWKEGSSEDEGERKGFVEESNGSEITLKF*