AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1304170

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1304170 MtrunA17_Chr4g0062921 98.157 434 8 0 1 434 1 434 0.0 887
Msa1304170 MtrunA17_Chr4g0045361 38.649 370 171 12 4 328 6 364 1.87e-61 205
Msa1304170 MtrunA17_Chr5g0422621 40.469 341 140 16 30 350 12 309 1.00e-51 177
Msa1304170 MtrunA17_Chr1g0198601 35.714 336 151 8 29 328 2 308 1.43e-50 175
Msa1304170 MtrunA17_Chr5g0402631 34.539 304 146 8 6 305 31 285 1.97e-37 139
Msa1304170 MtrunA17_Chr1g0175081 43.023 86 45 1 219 300 2 87 2.87e-15 71.2
Msa1304170 MtrunA17_Chr1g0190301 48.235 85 42 1 226 310 166 248 3.24e-15 77.0
Msa1304170 MtrunA17_Chr7g0261911 47.727 88 44 1 226 313 253 338 6.67e-15 76.6
Msa1304170 MtrunA17_Chr2g0304841 37.383 107 59 3 232 331 210 315 8.52e-15 76.6
Msa1304170 MtrunA17_Chr4g0074411 49.296 71 35 1 232 302 198 267 3.79e-14 74.3
Msa1304170 MtrunA17_Chr7g0255711 52.381 63 29 1 231 293 87 148 1.34e-13 71.2
Msa1304170 MtrunA17_Chr1g0175091 43.478 92 47 1 211 297 229 320 1.52e-13 72.0
Msa1304170 MtrunA17_Chr1g0149841 54.839 62 27 1 234 295 190 250 6.33e-13 70.5
Msa1304170 MtrunA17_Chr7g0274471 56.667 60 26 0 235 294 218 277 8.06e-13 70.1
Msa1304170 MtrunA17_Chr5g0400241 52.308 65 29 2 230 293 305 368 1.11e-12 69.7
Msa1304170 MtrunA17_Chr4g0031961 40.404 99 52 3 218 316 119 210 1.12e-12 68.6
Msa1304170 MtrunA17_Chr4g0067981 52.941 68 31 1 232 299 212 278 1.23e-12 69.7
Msa1304170 MtrunA17_Chr5g0417521 53.448 58 27 0 232 289 12 69 1.31e-12 68.9
Msa1304170 MtrunA17_Chr2g0321461 55.172 58 26 0 232 289 42 99 2.32e-12 68.2
Msa1304170 MtrunA17_Chr2g0294911 43.333 90 44 2 232 315 208 296 2.53e-12 68.9
Msa1304170 MtrunA17_Chr4g0074401 46.479 71 37 1 232 302 200 269 3.59e-12 68.2
Msa1304170 MtrunA17_Chr7g0254981 55.000 60 27 0 235 294 50 109 4.40e-12 66.2
Msa1304170 MtrunA17_Chr6g0461641 44.444 81 40 2 232 308 39 118 4.45e-12 67.4
Msa1304170 MtrunA17_Chr1g0162931 61.224 49 19 0 240 288 23 71 5.93e-12 66.2
Msa1304170 MtrunA17_Chr2g0291021 50.746 67 33 0 235 301 49 115 7.37e-12 66.2
Msa1304170 MtrunA17_Chr1g0149831 51.613 62 26 1 234 295 127 184 7.48e-12 65.1
Msa1304170 MtrunA17_Chr1g0161431 46.753 77 38 2 227 301 192 267 8.27e-12 67.4
Msa1304170 MtrunA17_Chr2g0324891 43.056 72 40 1 221 292 147 217 9.59e-12 66.6
Msa1304170 MtrunA17_Chr1g0210911 59.184 49 20 0 240 288 27 75 9.95e-12 65.9
Msa1304170 MtrunA17_Chr3g0109981 46.479 71 38 0 231 301 270 340 1.16e-11 66.2
Msa1304170 MtrunA17_Chr4g0054981 44.776 67 36 1 234 300 309 374 1.27e-11 66.6
Msa1304170 MtrunA17_Chr8g0366281 46.575 73 39 0 229 301 167 239 1.39e-11 65.5
Msa1304170 MtrunA17_Chr5g0409731 54.098 61 26 1 235 293 25 85 1.51e-11 65.1
Msa1304170 MtrunA17_Chr4g0040481 48.387 62 31 1 231 292 154 214 1.55e-11 65.9
Msa1304170 MtrunA17_Chr7g0243081 57.143 49 21 0 240 288 76 124 1.78e-11 65.5
Msa1304170 MtrunA17_Chr6g0479431 49.231 65 33 0 234 298 201 265 1.82e-11 65.5
Msa1304170 MtrunA17_Chr1g0197171 58.182 55 23 0 235 289 44 98 1.86e-11 64.7
Msa1304170 MtrunA17_Chr3g0137101 46.377 69 36 1 234 302 197 264 2.70e-11 65.5
Msa1304170 MtrunA17_Chr2g0290991 58.182 55 23 0 235 289 39 93 2.97e-11 64.3
Msa1304170 MtrunA17_Chr4g0009901 45.588 68 36 1 234 301 167 233 3.45e-11 63.5
Msa1304170 MtrunA17_Chr8g0376881 53.333 60 27 1 234 293 208 266 3.67e-11 65.1
Msa1304170 MtrunA17_Chr1g0154261 38.095 105 60 1 227 331 118 217 3.68e-11 63.9
Msa1304170 MtrunA17_Chr2g0288601 63.043 46 17 0 240 285 76 121 4.33e-11 60.5
Msa1304170 MtrunA17_Chr5g0410741 51.724 58 28 0 231 288 215 272 8.32e-11 63.5
Msa1304170 MtrunA17_Chr7g0258551 50.847 59 29 0 230 288 207 265 8.63e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1304170 AT2G03500.1 50.959 469 158 20 1 434 1 432 4.64e-118 352
Msa1304170 AT1G68670.1 37.535 357 157 12 32 351 13 340 3.87e-61 202
Msa1304170 AT1G25550.1 39.394 330 132 13 18 316 2 294 4.77e-55 186
Msa1304170 AT3G25790.1 33.333 357 141 8 19 333 1 302 7.85e-45 160
Msa1304170 AT1G25550.2 37.966 295 119 11 18 285 2 259 8.33e-43 152
Msa1304170 AT4G37180.1 35.473 296 139 8 7 293 16 268 2.51e-39 145
Msa1304170 AT4G37180.2 34.797 296 148 8 7 293 16 275 5.18e-37 139
Msa1304170 AT4G37180.3 34.722 288 136 8 7 285 16 260 1.03e-34 130
Msa1304170 AT1G13300.1 71.765 85 22 1 234 316 180 264 6.84e-34 130
Msa1304170 AT1G49560.1 64.706 85 25 2 231 314 188 268 1.23e-27 112
Msa1304170 AT3G25790.2 49.533 107 52 1 181 285 140 246 1.30e-20 91.3
Msa1304170 AT3G25790.2 28.409 176 76 6 19 146 1 174 3.83e-11 63.5
Msa1304170 AT1G49560.2 76.364 55 13 0 231 285 188 242 1.57e-20 91.3
Msa1304170 AT4G28610.1 53.333 90 41 1 224 313 214 302 8.37e-19 88.6
Msa1304170 AT5G05090.1 34.932 146 75 4 224 366 70 198 9.18e-16 77.4
Msa1304170 AT2G20400.2 51.899 79 37 1 235 313 231 308 2.18e-14 75.1
Msa1304170 AT2G20400.1 51.899 79 36 1 235 313 231 307 3.38e-14 74.3
Msa1304170 AT3G46640.2 41.489 94 53 2 225 318 134 225 6.06e-14 72.8
Msa1304170 AT3G46640.1 41.489 94 53 2 225 318 134 225 6.06e-14 72.8
Msa1304170 AT2G40970.1 35.200 125 66 2 231 355 101 210 6.75e-14 71.6
Msa1304170 AT3G46640.3 34.507 142 65 3 203 318 86 225 7.78e-14 72.8
Msa1304170 AT3G10760.1 52.381 63 29 1 231 293 101 162 9.87e-14 72.4
Msa1304170 AT5G59570.2 49.231 65 32 1 229 293 135 198 1.83e-13 71.2
Msa1304170 AT5G59570.1 49.231 65 32 1 229 293 135 198 1.83e-13 71.2
Msa1304170 AT2G20570.1 36.486 148 62 5 163 292 76 209 3.87e-13 71.2
Msa1304170 AT2G06020.1 58.182 55 23 0 235 289 86 140 7.01e-13 69.3
Msa1304170 AT3G04030.1 55.172 58 26 0 232 289 42 99 1.58e-12 69.3
Msa1304170 AT5G29000.2 43.820 89 48 1 217 303 211 299 1.61e-12 69.3
Msa1304170 AT5G29000.1 43.820 89 48 1 217 303 168 256 1.73e-12 68.9
Msa1304170 AT5G29000.3 43.820 89 48 1 217 303 168 256 1.73e-12 68.9
Msa1304170 AT5G18240.2 56.897 58 25 0 232 289 42 99 1.82e-12 68.9
Msa1304170 AT5G18240.3 56.897 58 25 0 232 289 42 99 1.82e-12 68.9
Msa1304170 AT3G04030.3 55.172 58 26 0 232 289 42 99 1.84e-12 68.9
Msa1304170 AT2G02060.2 57.692 52 22 0 237 288 31 82 2.02e-12 67.4
Msa1304170 AT2G02060.1 57.692 52 22 0 237 288 31 82 2.02e-12 67.4
Msa1304170 AT5G18240.5 56.897 58 25 0 232 289 42 99 2.08e-12 68.9
Msa1304170 AT5G18240.1 56.897 58 25 0 232 289 42 99 2.13e-12 68.9
Msa1304170 AT5G18240.4 56.897 58 25 0 232 289 42 99 2.13e-12 68.9
Msa1304170 AT5G58080.1 50.000 62 30 1 232 293 191 251 2.99e-12 68.9
Msa1304170 AT2G38300.1 55.769 52 23 0 237 288 56 107 3.85e-12 67.8
Msa1304170 AT5G29000.4 43.678 87 47 1 217 301 211 297 4.83e-12 67.0
Msa1304170 AT3G13040.3 51.613 62 30 0 233 294 239 300 5.89e-12 67.8
Msa1304170 AT3G13040.1 51.613 62 30 0 233 294 239 300 5.89e-12 67.8
Msa1304170 AT3G13040.2 51.613 62 30 0 233 294 239 300 5.89e-12 67.8
Msa1304170 AT2G01760.3 50.769 65 31 1 234 298 134 197 6.08e-12 67.0
Msa1304170 AT2G01760.2 50.769 65 31 1 234 298 227 290 9.66e-12 67.0
Msa1304170 AT2G01760.1 50.769 65 31 1 234 298 199 262 9.98e-12 66.6
Msa1304170 AT2G01060.1 49.296 71 35 1 230 299 9 79 1.09e-11 65.9
Msa1304170 AT5G45580.1 56.364 55 24 0 235 289 7 61 1.20e-11 65.5
Msa1304170 AT5G45580.2 56.364 55 24 0 235 289 23 77 1.42e-11 65.5
Msa1304170 AT1G14600.1 55.769 52 23 0 237 288 25 76 1.81e-11 64.7
Msa1304170 AT3G16857.3 53.333 60 27 1 234 293 166 224 1.89e-11 66.6
Msa1304170 AT3G16857.1 53.333 60 27 1 234 293 236 294 2.40e-11 66.2
Msa1304170 AT3G16857.2 53.333 60 27 1 234 293 236 294 2.49e-11 66.2
Msa1304170 AT3G04450.3 51.667 60 29 0 235 294 238 297 2.51e-11 65.1
Msa1304170 AT3G04450.1 45.833 72 39 0 235 306 238 309 2.97e-11 65.5
Msa1304170 AT5G06800.3 51.667 60 29 0 235 294 192 251 3.10e-11 64.3
Msa1304170 AT3G04450.4 45.833 72 39 0 235 306 198 269 3.14e-11 65.1
Msa1304170 AT3G04450.2 45.833 72 39 0 235 306 198 269 3.14e-11 65.1
Msa1304170 AT2G42660.1 46.250 80 41 1 225 302 38 117 4.30e-11 63.5
Msa1304170 AT1G67710.2 47.887 71 37 0 223 293 116 186 6.91e-11 64.3
Msa1304170 AT1G67710.3 47.887 71 37 0 223 293 107 177 7.26e-11 64.3
Msa1304170 AT5G06800.1 51.667 60 29 0 235 294 192 251 8.44e-11 63.9
Msa1304170 AT5G06800.2 51.667 60 29 0 235 294 192 251 8.85e-11 63.9
Msa1304170 AT1G32240.2 51.724 58 28 0 231 288 209 266 9.12e-11 63.5
Msa1304170 AT1G32240.1 51.724 58 28 0 231 288 209 266 9.64e-11 63.5
Msa1304170 AT5G16560.1 54.545 55 25 0 234 288 218 272 9.73e-11 63.9
Msa1304170 AT5G42630.2 54.545 55 25 0 234 288 104 158 9.74e-11 62.0

Find 127 sgRNAs with CRISPR-Local

Find 177 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACAGAGAGAGATATATAAA+AGG 0.194245 8_3:-67438093 None:intergenic
ATCAACTCCCTTATCTGTTT+TGG 0.218983 8_3:-67439771 None:intergenic
AAATAATGTAATCATTATTA+AGG 0.242268 8_3:-67440494 None:intergenic
TAAATATTATTAGTTAGTTT+TGG 0.269732 8_3:+67440648 Msa1304170:three_prime_UTR
TTTAAGAAATTAGAGTATAG+AGG 0.274487 8_3:+67440520 Msa1304170:three_prime_UTR
AATGATAACAATAACAATAT+TGG 0.280258 8_3:+67438852 Msa1304170:CDS
TGGAGCCAAACAAGTGAATT+AGG 0.287496 8_3:+67438795 Msa1304170:CDS
TTGTTCCTAATTCACTTGTT+TGG 0.309917 8_3:-67438800 None:intergenic
TTCTTGCTTTCCTATGAGTT+TGG 0.321167 8_3:-67439124 None:intergenic
GGATGACAAGTGCACAATTA+TGG 0.322662 8_3:+67438775 Msa1304170:CDS
AGGGAGTTGATGAAGGTTGA+TGG 0.335126 8_3:+67439783 Msa1304170:CDS
AACTGTAGAAACTAATTTAT+CGG 0.335462 8_3:+67440963 Msa1304170:three_prime_UTR
TCTTGCTTTGTAGTTCTTGT+GGG 0.337014 8_3:-67438131 None:intergenic
GGTATGAATTCTTCTAGAAT+TGG 0.343936 8_3:-67438681 None:intergenic
GCTCCACCATTTCTATGTTT+AGG 0.345291 8_3:-67438888 None:intergenic
TGTGCTGCAGTTGCATATTC+TGG 0.345650 8_3:-67440132 None:intergenic
CATGCTGGAGAGGTAGAAAA+AGG 0.354964 8_3:+67439011 Msa1304170:CDS
GTTGTTATTGATAGAATTAA+AGG 0.355331 8_3:-67440865 None:intergenic
CAAGAGCAAAAGAGAGTGTT+TGG 0.366915 8_3:-67438156 None:intergenic
TTATTATTGAACAGAAATAT+AGG 0.370436 8_3:+67440025 Msa1304170:intron
TCCATGTTACTGAAATCATT+TGG 0.380670 8_3:+67438326 Msa1304170:CDS
ATGTATGTGATAAGGCAAAT+TGG 0.383284 8_3:+67438754 Msa1304170:CDS
AGAATCAGATTCTGACTCTT+GGG 0.388127 8_3:+67440810 Msa1304170:three_prime_UTR
GAAGTTGATCATCAAGGAAA+AGG 0.397063 8_3:+67439053 Msa1304170:CDS
AGGATGAAGGGGAGAGGAAA+GGG 0.399338 8_3:+67440421 Msa1304170:CDS
CCAAGTCCAAGTGCACAAAA+TGG 0.410271 8_3:+67440063 Msa1304170:CDS
AGGGGAGTTCTGAGGATGAA+GGG 0.415570 8_3:+67440409 Msa1304170:CDS
ACAGAGAGAGATATATAAAA+GGG 0.418460 8_3:-67438092 None:intergenic
AAGAATCAGATTCTGACTCT+TGG 0.420642 8_3:+67440809 Msa1304170:three_prime_UTR
ACAAATCTACGGTGCAAGTC+TGG 0.427901 8_3:-67439158 None:intergenic
GGAGGAACCCCTACTCTCTA+TGG 0.427913 8_3:+67440159 Msa1304170:CDS
TTGTTATTGATAGAATTAAA+GGG 0.428376 8_3:-67440864 None:intergenic
GATGATGCTAATTGCTTCAC+TGG 0.429693 8_3:-67438702 None:intergenic
GGGTTGGAGAGTATCGAAAA+TGG 0.429853 8_3:+67440357 Msa1304170:CDS
GTAGAAGCTAGTGCTAGTTC+AGG 0.432544 8_3:-67438966 None:intergenic
TTCTTGCTTTGTAGTTCTTG+TGG 0.437935 8_3:-67438132 None:intergenic
GGAAGTAGCTGCTGCGGCGG+CGG 0.442713 8_3:-67440261 None:intergenic
ACAATTCAAACCAAACTCAT+AGG 0.443130 8_3:+67439114 Msa1304170:CDS
GTTAATGCTCTTCAAATGCT+TGG 0.449127 8_3:+67439179 Msa1304170:CDS
GAGGGGAGTTCTGAGGATGA+AGG 0.449245 8_3:+67440408 Msa1304170:CDS
AAATAATAATGTATGTGATA+AGG 0.450078 8_3:+67438746 Msa1304170:CDS
ATTAGTCCTAAACATAGAAA+TGG 0.460300 8_3:+67438882 Msa1304170:CDS
GAGGATGAAGGGGAGAGGAA+AGG 0.465500 8_3:+67440420 Msa1304170:CDS
CACATGTCTCCGGTGAACCT+TGG 0.465967 8_3:-67440329 None:intergenic
GGCAACACCAAAACAGATAA+GGG 0.469043 8_3:+67439764 Msa1304170:CDS
AACCCGTCTCCACATGTCTC+CGG 0.479058 8_3:-67440339 None:intergenic
TTAAGAAATTAGAGTATAGA+GGG 0.479086 8_3:+67440521 Msa1304170:three_prime_UTR
GGGGAGTTCTGAGGATGAAG+GGG 0.481259 8_3:+67440410 Msa1304170:CDS
GGTTTGTTGAAGAGAGCAAT+GGG 0.485151 8_3:+67440442 Msa1304170:CDS
TGAGTTTGTGATGATGCTAC+TGG 0.486233 8_3:-67439080 None:intergenic
CAGTAGTGTAGTACTGATCT+TGG 0.489595 8_3:-67440236 None:intergenic
TTCACCATCTGAACTAGGCT+TGG 0.491547 8_3:+67438283 Msa1304170:CDS
CCACATTACTGCACTGCTCC+AGG 0.496026 8_3:+67440213 Msa1304170:CDS
ATATAAAAGGGAAGGTATGT+TGG 0.498558 8_3:-67438080 None:intergenic
GCCACACGGCCAAGGTTCAC+CGG 0.500443 8_3:+67440320 Msa1304170:CDS
ATTAGCATCATCAGAAACAT+TGG 0.504933 8_3:+67438713 Msa1304170:CDS
GTTCTGAGGATGAAGGGGAG+AGG 0.509113 8_3:+67440415 Msa1304170:CDS
CAAACCAAGATGCATAGGAT+TGG 0.511312 8_3:-67440554 None:intergenic
CAAATGCTTGGTGGATCTCA+AGG 0.514435 8_3:+67439191 Msa1304170:CDS
GATGACCACCATAGAGAGTA+GGG 0.520807 8_3:-67440167 None:intergenic
GAAGAGGATAAGAAACATGC+TGG 0.521576 8_3:+67438996 Msa1304170:CDS
GTGTAGTACTGATCTTGGCC+TGG 0.523675 8_3:-67440231 None:intergenic
TGGCAACACCAAAACAGATA+AGG 0.524534 8_3:+67439763 Msa1304170:CDS
GGCGGAAGTAGCTGCTGCGG+CGG 0.525740 8_3:-67440264 None:intergenic
GAGAGTAGTAGCTGGAAAGA+GGG 0.527047 8_3:+67440390 Msa1304170:CDS
AAGTTGATCATCAAGGAAAA+GGG 0.527682 8_3:+67439054 Msa1304170:CDS
TGCATGCAACTTCTCACAAA+CGG 0.528281 8_3:+67438446 Msa1304170:CDS
CTACTACAACGGTCCACATA+GGG 0.529377 8_3:+67440786 Msa1304170:three_prime_UTR
CTTGCTTTGTAGTTCTTGTG+GGG 0.530429 8_3:-67438130 None:intergenic
AGAGTGAGATGATGAGAAGT+AGG 0.531857 8_3:-67440189 None:intergenic
AAAACTACTAGCTGTGCTGC+TGG 0.531932 8_3:-67440090 None:intergenic
CAAGCGTTTAGATCGAATCA+AGG 0.533730 8_3:+67438651 Msa1304170:CDS
GGGTTTGTTGAAGAGAGCAA+TGG 0.536366 8_3:+67440441 Msa1304170:CDS
GAAGAGCATTAACAAATCTA+CGG 0.536877 8_3:-67439169 None:intergenic
ATATGACAAAATAGAAAAGA+AGG 0.537548 8_3:-67438200 None:intergenic
TCCAAATGATTTCAGTAACA+TGG 0.537583 8_3:-67438327 None:intergenic
CACCGGAGACATGTGGAGAC+GGG 0.540363 8_3:+67440337 Msa1304170:CDS
ATGGCTTCACCATCTGAACT+AGG 0.543239 8_3:+67438278 Msa1304170:CDS
CAATCCAAGCCTAGTTCAGA+TGG 0.544635 8_3:-67438287 None:intergenic
TGAAGTTAAAAGCCATCTGC+AGG 0.544962 8_3:+67439818 Msa1304170:CDS
GGAGAGTAGTAGCTGGAAAG+AGG 0.546618 8_3:+67440389 Msa1304170:CDS
AATGCTCTTCAAATGCTTGG+TGG 0.549954 8_3:+67439182 Msa1304170:CDS
GAATCTGATTCTTCCCTATG+TGG 0.550071 8_3:-67440799 None:intergenic
ACAGATAAGGGAGTTGATGA+AGG 0.551674 8_3:+67439776 Msa1304170:CDS
GAATCAGATTCTGACTCTTG+GGG 0.555795 8_3:+67440811 Msa1304170:three_prime_UTR
GGATGACCACCATAGAGAGT+AGG 0.564523 8_3:-67440168 None:intergenic
AGAGAGATATATAAAAGGGA+AGG 0.566951 8_3:-67438088 None:intergenic
GGATAAGAAACATGCTGGAG+AGG 0.570240 8_3:+67439001 Msa1304170:CDS
ACTACTACAACGGTCCACAT+AGG 0.571850 8_3:+67440785 Msa1304170:three_prime_UTR
AGACGTCGGAGAGTAGTAGC+TGG 0.573303 8_3:+67440382 Msa1304170:CDS
TCTAACAAACCAAGATGCAT+AGG 0.574823 8_3:-67440559 None:intergenic
TATGCAACTGCAGCACATGC+AGG 0.576335 8_3:+67440138 Msa1304170:CDS
TTGCTTTGTAGTTCTTGTGG+GGG 0.576354 8_3:-67438129 None:intergenic
GAGAGAGAATTACCTGCAGA+TGG 0.576980 8_3:-67439830 None:intergenic
TCACCGGAGACATGTGGAGA+CGG 0.576988 8_3:+67440336 Msa1304170:CDS
GGGAATGAAGTTGATCATCA+AGG 0.578253 8_3:+67439047 Msa1304170:CDS
AGTCCTAAACATAGAAATGG+TGG 0.579197 8_3:+67438885 Msa1304170:CDS
GGAGACATGTGGAGACGGGT+TGG 0.587274 8_3:+67440341 Msa1304170:CDS
AGAAATAACTCCTCTTGTCA+AGG 0.588185 8_3:+67438933 Msa1304170:CDS
GCTGCAGTTGCATATTCTGG+TGG 0.594788 8_3:-67440129 None:intergenic
TGAACCTTGGCCGTGTGGCG+TGG 0.595965 8_3:-67440316 None:intergenic
ATAGGAAAGCAAGAAGGTGT+TGG 0.602381 8_3:+67439132 Msa1304170:CDS
AAGACCACGCCACACGGCCA+AGG 0.603883 8_3:+67440312 Msa1304170:CDS
CTGCAGTTGCATATTCTGGT+GGG 0.605931 8_3:-67440128 None:intergenic
TCTGTTATGTACTACTACAA+CGG 0.613011 8_3:+67440775 Msa1304170:three_prime_UTR
AGTAACATGGAGTAGCTATG+TGG 0.617118 8_3:-67438314 None:intergenic
TGGTGCATGTGATGAGGTGG+CGG 0.620813 8_3:-67440282 None:intergenic
AACTCCTCTTGTCAAGGACA+AGG 0.622383 8_3:+67438939 Msa1304170:CDS
GTGGCGTGGTCTTGTAGACA+TGG 0.624325 8_3:-67440302 None:intergenic
CTGGAAAGAGGGGAGTTCTG+AGG 0.624534 8_3:+67440401 Msa1304170:CDS
GGTGGCGGAAGTAGCTGCTG+CGG 0.626284 8_3:-67440267 None:intergenic
AGAGTAGTAGCTGGAAAGAG+GGG 0.629458 8_3:+67440391 Msa1304170:CDS
AAGACCTTGTCCTTGACAAG+AGG 0.632597 8_3:-67438943 None:intergenic
AAACTCATAGGAAAGCAAGA+AGG 0.642113 8_3:+67439126 Msa1304170:CDS
TCCGGTGAACCTTGGCCGTG+TGG 0.647253 8_3:-67440321 None:intergenic
GTCTACAAGACCACGCCACA+CGG 0.648472 8_3:+67440306 Msa1304170:CDS
ACATGGTGCATGTGATGAGG+TGG 0.655489 8_3:-67440285 None:intergenic
CCTGGAGCAGTGCAGTAATG+TGG 0.657609 8_3:-67440213 None:intergenic
TTAGTTTCTACAGTTACACG+TGG 0.660459 8_3:-67440955 None:intergenic
GTGAGAAGTTGCATGCAGAG+AGG 0.660628 8_3:-67438440 None:intergenic
CAAGGTTCACCGGAGACATG+TGG 0.663048 8_3:+67440330 Msa1304170:CDS
TGACAAAATAGAAAAGAAGG+TGG 0.666587 8_3:-67438197 None:intergenic
TAGACATGGTGCATGTGATG+AGG 0.673422 8_3:-67440288 None:intergenic
GCAACTGCAGCACATGCAGG+AGG 0.687455 8_3:+67440141 Msa1304170:CDS
TATCGAAAATGGAAAGACGT+CGG 0.689251 8_3:+67440368 Msa1304170:CDS
GGAACCCCTACTCTCTATGG+TGG 0.690464 8_3:+67440162 Msa1304170:CDS
ATGACCACCATAGAGAGTAG+GGG 0.721767 8_3:-67440166 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATCTCTTATTTATTTTTTTT+GGG - chr8_3:67439574-67439593 None:intergenic 10.0%
!! AAATAATGTAATCATTATTA+AGG - chr8_3:67440497-67440516 None:intergenic 10.0%
!!! TAAATATTATTAGTTAGTTT+TGG + chr8_3:67440648-67440667 Msa1304170:three_prime_UTR 10.0%
!! GTTACATATAAAAGAAAAAA+AGG - chr8_3:67438487-67438506 None:intergenic 15.0%
!! AAATAATAATGTATGTGATA+AGG + chr8_3:67438746-67438765 Msa1304170:CDS 15.0%
!! AATGATAACAATAACAATAT+TGG + chr8_3:67438852-67438871 Msa1304170:CDS 15.0%
!! TAGTATTAAAAAAGAATAGA+TGG + chr8_3:67439316-67439335 Msa1304170:intron 15.0%
!! AACAATTCTAGTAATTTAAA+TGG + chr8_3:67439471-67439490 Msa1304170:intron 15.0%
!! ACAATTCTAGTAATTTAAAT+GGG + chr8_3:67439472-67439491 Msa1304170:intron 15.0%
!!! CATCTCTTATTTATTTTTTT+TGG - chr8_3:67439575-67439594 None:intergenic 15.0%
!! AAATTTAGTCAAATGTTATT+AGG + chr8_3:67439597-67439616 Msa1304170:intron 15.0%
!! TTATTATTGAACAGAAATAT+AGG + chr8_3:67440025-67440044 Msa1304170:intron 15.0%
!!! TTGTTATTGATAGAATTAAA+GGG - chr8_3:67440867-67440886 None:intergenic 15.0%
!! ATATGACAAAATAGAAAAGA+AGG - chr8_3:67438203-67438222 None:intergenic 20.0%
!!! GTTATTTAGTTGTTTTAACA+AGG + chr8_3:67438254-67438273 Msa1304170:five_prime_UTR 20.0%
!! ACATATAAAAGAAAAAAAGG+TGG - chr8_3:67438484-67438503 None:intergenic 20.0%
!!! GTTATCATTAATTTCTTTTG+TGG - chr8_3:67438841-67438860 None:intergenic 20.0%
!!! TTATTTCTTTCTTTTGAGAA+TGG - chr8_3:67438921-67438940 None:intergenic 20.0%
!! AAAAAGGTAAAACAAATTCA+GGG + chr8_3:67439027-67439046 Msa1304170:CDS 20.0%
!! TGCAAAAGAAACATATAATA+AGG - chr8_3:67439286-67439305 None:intergenic 20.0%
!! GTTTCTTATAAAATAGTCTT+AGG + chr8_3:67439369-67439388 Msa1304170:intron 20.0%
!! ATATGTTTGTTTAATTGTAG+TGG + chr8_3:67439743-67439762 Msa1304170:intron 20.0%
!!! ATCACTCTCAAATTTTAATT+AGG + chr8_3:67440471-67440490 Msa1304170:exon 20.0%
!! TTTAAGAAATTAGAGTATAG+AGG + chr8_3:67440520-67440539 Msa1304170:three_prime_UTR 20.0%
!! TTAAGAAATTAGAGTATAGA+GGG + chr8_3:67440521-67440540 Msa1304170:three_prime_UTR 20.0%
!!! GTTGTTATTGATAGAATTAA+AGG - chr8_3:67440868-67440887 None:intergenic 20.0%
!!! AGTTTCAACTTTAGTATTTT+TGG + chr8_3:67440915-67440934 Msa1304170:three_prime_UTR 20.0%
! ACAGAGAGAGATATATAAAA+GGG - chr8_3:67438095-67438114 None:intergenic 25.0%
!!! TTAGTTGTTTTAACAAGGAA+TGG + chr8_3:67438259-67438278 Msa1304170:exon 25.0%
! ATTAGTCCTAAACATAGAAA+TGG + chr8_3:67438882-67438901 Msa1304170:CDS 25.0%
!!! TTCTTTTGAGAATGGTAAAA+AGG - chr8_3:67438913-67438932 None:intergenic 25.0%
! GAAAAAGGTAAAACAAATTC+AGG + chr8_3:67439026-67439045 Msa1304170:CDS 25.0%
! TAATTGATACTAGTGGTATT+GGG - chr8_3:67439427-67439446 None:intergenic 25.0%
! ATAATTGATACTAGTGGTAT+TGG - chr8_3:67439428-67439447 None:intergenic 25.0%
! AATACCACTAGTATCAATTA+TGG + chr8_3:67439427-67439446 Msa1304170:intron 25.0%
!! CTTTTGTATTTTACTTTGCT+TGG + chr8_3:67439961-67439980 Msa1304170:intron 25.0%
!!! AGTTTTGGATGAATTTTATG+TGG + chr8_3:67440663-67440682 Msa1304170:three_prime_UTR 25.0%
! ATATAAAAGGGAAGGTATGT+TGG - chr8_3:67438083-67438102 None:intergenic 30.0%
AGAGAGATATATAAAAGGGA+AGG - chr8_3:67438091-67438110 None:intergenic 30.0%
GACAGAGAGAGATATATAAA+AGG - chr8_3:67438096-67438115 None:intergenic 30.0%
TGACAAAATAGAAAAGAAGG+TGG - chr8_3:67438200-67438219 None:intergenic 30.0%
TCCATGTTACTGAAATCATT+TGG + chr8_3:67438326-67438345 Msa1304170:CDS 30.0%
TCCAAATGATTTCAGTAACA+TGG - chr8_3:67438330-67438349 None:intergenic 30.0%
TGTCAGATAAGATTTGAACT+CGG - chr8_3:67438543-67438562 None:intergenic 30.0%
!! GGTATGAATTCTTCTAGAAT+TGG - chr8_3:67438684-67438703 None:intergenic 30.0%
ATTAGCATCATCAGAAACAT+TGG + chr8_3:67438713-67438732 Msa1304170:CDS 30.0%
ATGTATGTGATAAGGCAAAT+TGG + chr8_3:67438754-67438773 Msa1304170:CDS 30.0%
TTGTTCCTAATTCACTTGTT+TGG - chr8_3:67438803-67438822 None:intergenic 30.0%
! AAGTTGATCATCAAGGAAAA+GGG + chr8_3:67439054-67439073 Msa1304170:CDS 30.0%
ACAATTCAAACCAAACTCAT+AGG + chr8_3:67439114-67439133 Msa1304170:CDS 30.0%
!! GAAGAGCATTAACAAATCTA+CGG - chr8_3:67439172-67439191 None:intergenic 30.0%
TAAGCCATAATTGATACTAG+TGG - chr8_3:67439434-67439453 None:intergenic 30.0%
!!! ATGGCTTTTAACTTCATCAT+TGG - chr8_3:67439814-67439833 None:intergenic 30.0%
TAATTCTCTCTCTCAGTTTA+AGG + chr8_3:67439841-67439860 Msa1304170:intron 30.0%
!!! TAGTAGTTTTAGGAGGAATA+TGG + chr8_3:67440103-67440122 Msa1304170:CDS 30.0%
!!! AGTAGTTTTAGGAGGAATAT+GGG + chr8_3:67440104-67440123 Msa1304170:CDS 30.0%
!! ATATTGCATGCAGTTTTTAG+TGG + chr8_3:67440700-67440719 Msa1304170:three_prime_UTR 30.0%
!!! TATTGCATGCAGTTTTTAGT+GGG + chr8_3:67440701-67440720 Msa1304170:three_prime_UTR 30.0%
!!! AGTTTTTAGTGGGGTTAAAA+AGG + chr8_3:67440711-67440730 Msa1304170:three_prime_UTR 30.0%
TTAAAAAGGACAGAAAAGTG+AGG + chr8_3:67440725-67440744 Msa1304170:three_prime_UTR 30.0%
TCTGTTATGTACTACTACAA+CGG + chr8_3:67440775-67440794 Msa1304170:three_prime_UTR 30.0%
TCTTGCTTTGTAGTTCTTGT+GGG - chr8_3:67438134-67438153 None:intergenic 35.0%
TTCTTGCTTTGTAGTTCTTG+TGG - chr8_3:67438135-67438154 None:intergenic 35.0%
AGTCCTAAACATAGAAATGG+TGG + chr8_3:67438885-67438904 Msa1304170:CDS 35.0%
AGAAATAACTCCTCTTGTCA+AGG + chr8_3:67438933-67438952 Msa1304170:CDS 35.0%
AGCTTCTACTCAAAAAGAAG+AGG + chr8_3:67438980-67438999 Msa1304170:CDS 35.0%
! GAAGTTGATCATCAAGGAAA+AGG + chr8_3:67439053-67439072 Msa1304170:CDS 35.0%
TTCTTGCTTTCCTATGAGTT+TGG - chr8_3:67439127-67439146 None:intergenic 35.0%
AAACTCATAGGAAAGCAAGA+AGG + chr8_3:67439126-67439145 Msa1304170:CDS 35.0%
GTTAATGCTCTTCAAATGCT+TGG + chr8_3:67439179-67439198 Msa1304170:CDS 35.0%
GAAGCAGAGATGTGAAATTT+AGG + chr8_3:67439540-67439559 Msa1304170:intron 35.0%
! ATCAACTCCCTTATCTGTTT+TGG - chr8_3:67439774-67439793 None:intergenic 35.0%
AGTACAGCAACAAACAACAA+AGG - chr8_3:67439904-67439923 None:intergenic 35.0%
AGTTCGTTATAAGTTGTCAG+AGG - chr8_3:67439943-67439962 None:intergenic 35.0%
TATCGAAAATGGAAAGACGT+CGG + chr8_3:67440368-67440387 Msa1304170:CDS 35.0%
! TTTTCCAATCCTATGCATCT+TGG + chr8_3:67440550-67440569 Msa1304170:three_prime_UTR 35.0%
TCTAACAAACCAAGATGCAT+AGG - chr8_3:67440562-67440581 None:intergenic 35.0%
! TTGGATGAATTTTATGTGGC+AGG + chr8_3:67440667-67440686 Msa1304170:three_prime_UTR 35.0%
!!! ATTGCATGCAGTTTTTAGTG+GGG + chr8_3:67440702-67440721 Msa1304170:three_prime_UTR 35.0%
AAGAATCAGATTCTGACTCT+TGG + chr8_3:67440809-67440828 Msa1304170:three_prime_UTR 35.0%
AGAATCAGATTCTGACTCTT+GGG + chr8_3:67440810-67440829 Msa1304170:three_prime_UTR 35.0%
TTAGTTTCTACAGTTACACG+TGG - chr8_3:67440958-67440977 None:intergenic 35.0%
TTGCTTTGTAGTTCTTGTGG+GGG - chr8_3:67438132-67438151 None:intergenic 40.0%
CTTGCTTTGTAGTTCTTGTG+GGG - chr8_3:67438133-67438152 None:intergenic 40.0%
!! CAAGAGCAAAAGAGAGTGTT+TGG - chr8_3:67438159-67438178 None:intergenic 40.0%
AGTAACATGGAGTAGCTATG+TGG - chr8_3:67438317-67438336 None:intergenic 40.0%
TGCATGCAACTTCTCACAAA+CGG + chr8_3:67438446-67438465 Msa1304170:CDS 40.0%
CAAGCGTTTAGATCGAATCA+AGG + chr8_3:67438651-67438670 Msa1304170:CDS 40.0%
GATGATGCTAATTGCTTCAC+TGG - chr8_3:67438705-67438724 None:intergenic 40.0%
GGATGACAAGTGCACAATTA+TGG + chr8_3:67438775-67438794 Msa1304170:CDS 40.0%
TGGAGCCAAACAAGTGAATT+AGG + chr8_3:67438795-67438814 Msa1304170:CDS 40.0%
GCTCCACCATTTCTATGTTT+AGG - chr8_3:67438891-67438910 None:intergenic 40.0%
GAAGAGGATAAGAAACATGC+TGG + chr8_3:67438996-67439015 Msa1304170:CDS 40.0%
! GGGAATGAAGTTGATCATCA+AGG + chr8_3:67439047-67439066 Msa1304170:CDS 40.0%
! TGAGTTTGTGATGATGCTAC+TGG - chr8_3:67439083-67439102 None:intergenic 40.0%
! ATAGGAAAGCAAGAAGGTGT+TGG + chr8_3:67439132-67439151 Msa1304170:CDS 40.0%
AATGCTCTTCAAATGCTTGG+TGG + chr8_3:67439182-67439201 Msa1304170:CDS 40.0%
TGGCAACACCAAAACAGATA+AGG + chr8_3:67439763-67439782 Msa1304170:CDS 40.0%
GGCAACACCAAAACAGATAA+GGG + chr8_3:67439764-67439783 Msa1304170:CDS 40.0%
!! ACAGATAAGGGAGTTGATGA+AGG + chr8_3:67439776-67439795 Msa1304170:CDS 40.0%
TGAAGTTAAAAGCCATCTGC+AGG + chr8_3:67439818-67439837 Msa1304170:CDS 40.0%
AGAGTGAGATGATGAGAAGT+AGG - chr8_3:67440192-67440211 None:intergenic 40.0%
!! CAGTAGTGTAGTACTGATCT+TGG - chr8_3:67440239-67440258 None:intergenic 40.0%
!! GGTTTGTTGAAGAGAGCAAT+GGG + chr8_3:67440442-67440461 Msa1304170:CDS 40.0%
CAAACCAAGATGCATAGGAT+TGG - chr8_3:67440557-67440576 None:intergenic 40.0%
GAATCTGATTCTTCCCTATG+TGG - chr8_3:67440802-67440821 None:intergenic 40.0%
GAATCAGATTCTGACTCTTG+GGG + chr8_3:67440811-67440830 Msa1304170:three_prime_UTR 40.0%
ATGGCTTCACCATCTGAACT+AGG + chr8_3:67438278-67438297 Msa1304170:CDS 45.0%
TTCACCATCTGAACTAGGCT+TGG + chr8_3:67438283-67438302 Msa1304170:CDS 45.0%
CAATCCAAGCCTAGTTCAGA+TGG - chr8_3:67438290-67438309 None:intergenic 45.0%
! TCGTGCACAATTTTCAGCGA+TGG + chr8_3:67438608-67438627 Msa1304170:intron 45.0%
AACTCCTCTTGTCAAGGACA+AGG + chr8_3:67438939-67438958 Msa1304170:CDS 45.0%
AAGACCTTGTCCTTGACAAG+AGG - chr8_3:67438946-67438965 None:intergenic 45.0%
GTAGAAGCTAGTGCTAGTTC+AGG - chr8_3:67438969-67438988 None:intergenic 45.0%
GGATAAGAAACATGCTGGAG+AGG + chr8_3:67439001-67439020 Msa1304170:CDS 45.0%
CATGCTGGAGAGGTAGAAAA+AGG + chr8_3:67439011-67439030 Msa1304170:CDS 45.0%
ACAAATCTACGGTGCAAGTC+TGG - chr8_3:67439161-67439180 None:intergenic 45.0%
! CAAATGCTTGGTGGATCTCA+AGG + chr8_3:67439191-67439210 Msa1304170:CDS 45.0%
!! AGGGAGTTGATGAAGGTTGA+TGG + chr8_3:67439783-67439802 Msa1304170:CDS 45.0%
GAGAGAGAATTACCTGCAGA+TGG - chr8_3:67439833-67439852 None:intergenic 45.0%
! CCATTTTGTGCACTTGGACT+TGG - chr8_3:67440066-67440085 None:intergenic 45.0%
CCAAGTCCAAGTGCACAAAA+TGG + chr8_3:67440063-67440082 Msa1304170:CDS 45.0%
AAAACTACTAGCTGTGCTGC+TGG - chr8_3:67440093-67440112 None:intergenic 45.0%
! GCAGCACAGCTAGTAGTTTT+AGG + chr8_3:67440093-67440112 Msa1304170:CDS 45.0%
!!! GCACAGCTAGTAGTTTTAGG+AGG + chr8_3:67440096-67440115 Msa1304170:CDS 45.0%
CTGCAGTTGCATATTCTGGT+GGG - chr8_3:67440131-67440150 None:intergenic 45.0%
TGTGCTGCAGTTGCATATTC+TGG - chr8_3:67440135-67440154 None:intergenic 45.0%
ATGACCACCATAGAGAGTAG+GGG - chr8_3:67440169-67440188 None:intergenic 45.0%
GATGACCACCATAGAGAGTA+GGG - chr8_3:67440170-67440189 None:intergenic 45.0%
TAGACATGGTGCATGTGATG+AGG - chr8_3:67440291-67440310 None:intergenic 45.0%
!! GGGTTGGAGAGTATCGAAAA+TGG + chr8_3:67440357-67440376 Msa1304170:CDS 45.0%
GAGAGTAGTAGCTGGAAAGA+GGG + chr8_3:67440390-67440409 Msa1304170:CDS 45.0%
AGAGTAGTAGCTGGAAAGAG+GGG + chr8_3:67440391-67440410 Msa1304170:CDS 45.0%
!! GGGTTTGTTGAAGAGAGCAA+TGG + chr8_3:67440441-67440460 Msa1304170:CDS 45.0%
ACTACTACAACGGTCCACAT+AGG + chr8_3:67440785-67440804 Msa1304170:three_prime_UTR 45.0%
CTACTACAACGGTCCACATA+GGG + chr8_3:67440786-67440805 Msa1304170:three_prime_UTR 45.0%
! TTCTGACTCTTGGGGTTTTC+TGG + chr8_3:67440819-67440838 Msa1304170:three_prime_UTR 45.0%
TGTAGTTCTTGTGGGGGAGA+GGG - chr8_3:67438126-67438145 None:intergenic 50.0%
TTGTAGTTCTTGTGGGGGAG+AGG - chr8_3:67438127-67438146 None:intergenic 50.0%
GTGAGAAGTTGCATGCAGAG+AGG - chr8_3:67438443-67438462 None:intergenic 50.0%
TGAACTCGGTCTCTTGAGAG+CGG - chr8_3:67438529-67438548 None:intergenic 50.0%
! GGTGCACCATTTTGTGCACT+TGG - chr8_3:67440072-67440091 None:intergenic 50.0%
GCTGCAGTTGCATATTCTGG+TGG - chr8_3:67440132-67440151 None:intergenic 50.0%
TATGCAACTGCAGCACATGC+AGG + chr8_3:67440138-67440157 Msa1304170:CDS 50.0%
GGATGACCACCATAGAGAGT+AGG - chr8_3:67440171-67440190 None:intergenic 50.0%
!! GTGTAGTACTGATCTTGGCC+TGG - chr8_3:67440234-67440253 None:intergenic 50.0%
ACATGGTGCATGTGATGAGG+TGG - chr8_3:67440288-67440307 None:intergenic 50.0%
GGAGAGTAGTAGCTGGAAAG+AGG + chr8_3:67440389-67440408 Msa1304170:CDS 50.0%
!! AGGGGAGTTCTGAGGATGAA+GGG + chr8_3:67440409-67440428 Msa1304170:CDS 50.0%
AGGATGAAGGGGAGAGGAAA+GGG + chr8_3:67440421-67440440 Msa1304170:CDS 50.0%
GGAGGAACCCCTACTCTCTA+TGG + chr8_3:67440159-67440178 Msa1304170:CDS 55.0%
GGAACCCCTACTCTCTATGG+TGG + chr8_3:67440162-67440181 Msa1304170:CDS 55.0%
CCTGGAGCAGTGCAGTAATG+TGG - chr8_3:67440216-67440235 None:intergenic 55.0%
CCACATTACTGCACTGCTCC+AGG + chr8_3:67440213-67440232 Msa1304170:CDS 55.0%
TGGTGCATGTGATGAGGTGG+CGG - chr8_3:67440285-67440304 None:intergenic 55.0%
!! GTGGCGTGGTCTTGTAGACA+TGG - chr8_3:67440305-67440324 None:intergenic 55.0%
GTCTACAAGACCACGCCACA+CGG + chr8_3:67440306-67440325 Msa1304170:CDS 55.0%
CACATGTCTCCGGTGAACCT+TGG - chr8_3:67440332-67440351 None:intergenic 55.0%
CAAGGTTCACCGGAGACATG+TGG + chr8_3:67440330-67440349 Msa1304170:CDS 55.0%
TCACCGGAGACATGTGGAGA+CGG + chr8_3:67440336-67440355 Msa1304170:CDS 55.0%
AACCCGTCTCCACATGTCTC+CGG - chr8_3:67440342-67440361 None:intergenic 55.0%
AGACGTCGGAGAGTAGTAGC+TGG + chr8_3:67440382-67440401 Msa1304170:CDS 55.0%
CTGGAAAGAGGGGAGTTCTG+AGG + chr8_3:67440401-67440420 Msa1304170:CDS 55.0%
!! GAGGGGAGTTCTGAGGATGA+AGG + chr8_3:67440408-67440427 Msa1304170:CDS 55.0%
!! GGGGAGTTCTGAGGATGAAG+GGG + chr8_3:67440410-67440429 Msa1304170:CDS 55.0%
!! GTTCTGAGGATGAAGGGGAG+AGG + chr8_3:67440415-67440434 Msa1304170:CDS 55.0%
GAGGATGAAGGGGAGAGGAA+AGG + chr8_3:67440420-67440439 Msa1304170:CDS 55.0%
GCAACTGCAGCACATGCAGG+AGG + chr8_3:67440141-67440160 Msa1304170:CDS 60.0%
CACCGGAGACATGTGGAGAC+GGG + chr8_3:67440337-67440356 Msa1304170:CDS 60.0%
GGAGACATGTGGAGACGGGT+TGG + chr8_3:67440341-67440360 Msa1304170:CDS 60.0%
!! GGTGGCGGAAGTAGCTGCTG+CGG - chr8_3:67440270-67440289 None:intergenic 65.0%
AAGACCACGCCACACGGCCA+AGG + chr8_3:67440312-67440331 Msa1304170:CDS 65.0%
TGAACCTTGGCCGTGTGGCG+TGG - chr8_3:67440319-67440338 None:intergenic 65.0%
GCCACACGGCCAAGGTTCAC+CGG + chr8_3:67440320-67440339 Msa1304170:CDS 65.0%
TCCGGTGAACCTTGGCCGTG+TGG - chr8_3:67440324-67440343 None:intergenic 65.0%
GGAAGTAGCTGCTGCGGCGG+CGG - chr8_3:67440264-67440283 None:intergenic 70.0%
GGCGGAAGTAGCTGCTGCGG+CGG - chr8_3:67440267-67440286 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 67438078 67440984 67438078 ID=Msa1304170;Name=Msa1304170
chr8_3 mRNA 67438078 67440984 67438078 ID=Msa1304170-mRNA-1;Parent=Msa1304170;Name=Msa1304170-mRNA-1;_AED=0.02;_eAED=0.02;_QI=200|1|1|1|1|1|4|496|434
chr8_3 exon 67438078 67438467 67438078 ID=Msa1304170-mRNA-1:exon:20660;Parent=Msa1304170-mRNA-1
chr8_3 exon 67438625 67439212 67438625 ID=Msa1304170-mRNA-1:exon:20661;Parent=Msa1304170-mRNA-1
chr8_3 exon 67439763 67439839 67439763 ID=Msa1304170-mRNA-1:exon:20662;Parent=Msa1304170-mRNA-1
chr8_3 exon 67440039 67440984 67440039 ID=Msa1304170-mRNA-1:exon:20663;Parent=Msa1304170-mRNA-1
chr8_3 five_prime_UTR 67438078 67438277 67438078 ID=Msa1304170-mRNA-1:five_prime_utr;Parent=Msa1304170-mRNA-1
chr8_3 CDS 67438278 67438467 67438278 ID=Msa1304170-mRNA-1:cds;Parent=Msa1304170-mRNA-1
chr8_3 CDS 67438625 67439212 67438625 ID=Msa1304170-mRNA-1:cds;Parent=Msa1304170-mRNA-1
chr8_3 CDS 67439763 67439839 67439763 ID=Msa1304170-mRNA-1:cds;Parent=Msa1304170-mRNA-1
chr8_3 CDS 67440039 67440488 67440039 ID=Msa1304170-mRNA-1:cds;Parent=Msa1304170-mRNA-1
chr8_3 three_prime_UTR 67440489 67440984 67440489 ID=Msa1304170-mRNA-1:three_prime_utr;Parent=Msa1304170-mRNA-1
Gene Sequence

>Msa1304170

ATGGCTTCACCATCTGAACTAGGCTTGGATTGCAAGCCACATAGCTACTCCATGTTACTGAAATCATTTGGAGAACAAAGTGATCAAAGCTACAAACTTGAAGAGTTTGTTTCTCGCTTAGAAGAAGAACGTCTCAAAATTGATGCTTTCAAACGTGAGCTTCCTCTCTGCATGCAACTTCTCACAAACGCGATGGAAGCATCGAAGCAGCAACTTCAAGCGTTTAGATCGAATCAAGGAGCAAAACCAATTCTAGAAGAATTCATACCAGTGAAGCAATTAGCATCATCAGAAACATTGGAAAAGACAACAAATAATAATGTATGTGATAAGGCAAATTGGATGACAAGTGCACAATTATGGAGCCAAACAAGTGAATTAGGAACAAAACAACAACAAAATTCCACAAAAGAAATTAATGATAACAATAACAATATTGGATTTAACATTAGTCCTAAACATAGAAATGGTGGAGCCTTTTTACCATTCTCAAAAGAAAGAAATAACTCCTCTTGTCAAGGACAAGGTCTTCCTGAACTAGCACTAGCTTCTACTCAAAAAGAAGAGGATAAGAAACATGCTGGAGAGGTAGAAAAAGGTAAAACAAATTCAGGGAATGAAGTTGATCATCAAGGAAAAGGGAGTCCAGTAGCATCATCACAAACTCAGACAACAAGCAACAATTCAAACCAAACTCATAGGAAAGCAAGAAGGTGTTGGTCACCAGACTTGCACCGTAGATTTGTTAATGCTCTTCAAATGCTTGGTGGATCTCAAGTGGCAACACCAAAACAGATAAGGGAGTTGATGAAGGTTGATGGTTTGACCAATGATGAAGTTAAAAGCCATCTGCAGAAATATAGGCTACACACAAGAAGACCAAGTCCAAGTGCACAAAATGGTGCACCAGCAGCACAGCTAGTAGTTTTAGGAGGAATATGGGTCCCACCAGAATATGCAACTGCAGCACATGCAGGAGGAACCCCTACTCTCTATGGTGGTCATCCTACTTCTCATCATCTCACTCTGCCACATTACTGCACTGCTCCAGGCCAAGATCAGTACTACACTACTGCACCGCCGCCGCAGCAGCTACTTCCGCCACCTCATCACATGCACCATGTCTACAAGACCACGCCACACGGCCAAGGTTCACCGGAGACATGTGGAGACGGGTTGGAGAGTATCGAAAATGGAAAGACGTCGGAGAGTAGTAGCTGGAAAGAGGGGAGTTCTGAGGATGAAGGGGAGAGGAAAGGGTTTGTTGAAGAGAGCAATGGGAGTGAAATCACTCTCAAATTTTAA
Protein sequence

>Msa1304170

MASPSELGLDCKPHSYSMLLKSFGEQSDQSYKLEEFVSRLEEERLKIDAFKRELPLCMQLLTNAMEASKQQLQAFRSNQGAKPILEEFIPVKQLASSETLEKTTNNNVCDKANWMTSAQLWSQTSELGTKQQQNSTKEINDNNNNIGFNISPKHRNGGAFLPFSKERNNSSCQGQGLPELALASTQKEEDKKHAGEVEKGKTNSGNEVDHQGKGSPVASSQTQTTSNNSNQTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSPSAQNGAPAAQLVVLGGIWVPPEYATAAHAGGTPTLYGGHPTSHHLTLPHYCTAPGQDQYYTTAPPPQQLLPPPHHMHHVYKTTPHGQGSPETCGDGLESIENGKTSESSSWKEGSSEDEGERKGFVEESNGSEITLKF*