AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1261260

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1261260 MtrunA17_Chr4g0062921 98.157 434 8 0 1 434 1 434 0.0 887
Msa1261260 MtrunA17_Chr4g0045361 38.649 370 171 12 4 328 6 364 1.16e-61 205
Msa1261260 MtrunA17_Chr5g0422621 40.176 341 141 16 30 350 12 309 2.58e-51 177
Msa1261260 MtrunA17_Chr1g0198601 35.417 336 152 8 29 328 2 308 4.57e-50 174
Msa1261260 MtrunA17_Chr5g0402631 34.539 304 146 8 6 305 31 285 2.57e-37 139
Msa1261260 MtrunA17_Chr1g0175081 43.023 86 45 1 219 300 2 87 2.87e-15 71.2
Msa1261260 MtrunA17_Chr1g0190301 48.235 85 42 1 226 310 166 248 3.36e-15 77.0
Msa1261260 MtrunA17_Chr7g0261911 47.727 88 44 1 226 313 253 338 6.37e-15 76.6
Msa1261260 MtrunA17_Chr2g0304841 37.383 107 59 3 232 331 210 315 8.37e-15 76.6
Msa1261260 MtrunA17_Chr4g0074411 49.296 71 35 1 232 302 198 267 3.79e-14 74.3
Msa1261260 MtrunA17_Chr7g0255711 52.381 63 29 1 231 293 87 148 1.35e-13 71.2
Msa1261260 MtrunA17_Chr1g0175091 43.478 92 47 1 211 297 229 320 1.47e-13 72.0
Msa1261260 MtrunA17_Chr1g0149841 54.839 62 27 1 234 295 190 250 6.28e-13 70.5
Msa1261260 MtrunA17_Chr7g0274471 56.667 60 26 0 235 294 218 277 8.14e-13 70.1
Msa1261260 MtrunA17_Chr4g0031961 40.404 99 52 3 218 316 119 210 1.07e-12 68.6
Msa1261260 MtrunA17_Chr5g0400241 52.308 65 29 2 230 293 305 368 1.10e-12 69.7
Msa1261260 MtrunA17_Chr4g0067981 52.941 68 31 1 232 299 212 278 1.18e-12 70.1
Msa1261260 MtrunA17_Chr5g0417521 53.448 58 27 0 232 289 12 69 1.28e-12 68.9
Msa1261260 MtrunA17_Chr2g0321461 55.172 58 26 0 232 289 42 99 2.15e-12 68.6
Msa1261260 MtrunA17_Chr2g0294911 43.333 90 44 2 232 315 208 296 2.53e-12 68.9
Msa1261260 MtrunA17_Chr4g0074401 46.479 71 37 1 232 302 200 269 3.52e-12 68.2
Msa1261260 MtrunA17_Chr7g0254981 55.000 60 27 0 235 294 50 109 4.32e-12 66.2
Msa1261260 MtrunA17_Chr6g0461641 44.444 81 40 2 232 308 39 118 4.33e-12 67.4
Msa1261260 MtrunA17_Chr1g0162931 61.224 49 19 0 240 288 23 71 5.82e-12 66.2
Msa1261260 MtrunA17_Chr2g0291021 50.746 67 33 0 235 301 49 115 7.24e-12 66.2
Msa1261260 MtrunA17_Chr1g0149831 51.613 62 26 1 234 295 127 184 7.41e-12 65.1
Msa1261260 MtrunA17_Chr1g0161431 46.753 77 38 2 227 301 192 267 8.65e-12 67.0
Msa1261260 MtrunA17_Chr2g0324891 43.056 72 40 1 221 292 147 217 9.85e-12 66.6
Msa1261260 MtrunA17_Chr1g0210911 59.184 49 20 0 240 288 27 75 9.86e-12 65.9
Msa1261260 MtrunA17_Chr3g0109981 46.479 71 38 0 231 301 270 340 1.07e-11 66.6
Msa1261260 MtrunA17_Chr4g0054981 44.776 67 36 1 234 300 309 374 1.19e-11 66.6
Msa1261260 MtrunA17_Chr8g0366281 46.575 73 39 0 229 301 167 239 1.36e-11 65.9
Msa1261260 MtrunA17_Chr5g0409731 54.098 61 26 1 235 293 25 85 1.51e-11 65.1
Msa1261260 MtrunA17_Chr4g0040481 48.387 62 31 1 231 292 154 214 1.53e-11 65.9
Msa1261260 MtrunA17_Chr6g0479431 49.231 65 33 0 234 298 201 265 1.70e-11 65.5
Msa1261260 MtrunA17_Chr7g0243081 57.143 49 21 0 240 288 76 124 1.73e-11 65.5
Msa1261260 MtrunA17_Chr1g0197171 58.182 55 23 0 235 289 44 98 1.81e-11 64.7
Msa1261260 MtrunA17_Chr3g0137101 46.377 69 36 1 234 302 197 264 2.53e-11 65.9
Msa1261260 MtrunA17_Chr2g0290991 58.182 55 23 0 235 289 39 93 2.92e-11 64.3
Msa1261260 MtrunA17_Chr4g0009901 45.588 68 36 1 234 301 167 233 3.45e-11 63.5
Msa1261260 MtrunA17_Chr8g0376881 53.333 60 27 1 234 293 208 266 3.51e-11 65.1
Msa1261260 MtrunA17_Chr1g0154261 38.095 105 60 1 227 331 118 217 3.58e-11 63.9
Msa1261260 MtrunA17_Chr2g0288601 63.043 46 17 0 240 285 76 121 4.41e-11 60.5
Msa1261260 MtrunA17_Chr5g0410741 51.724 58 28 0 231 288 215 272 8.25e-11 63.5
Msa1261260 MtrunA17_Chr7g0258551 50.847 59 29 0 230 288 207 265 8.47e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1261260 AT2G03500.1 50.959 469 158 20 1 434 1 432 4.95e-118 352
Msa1261260 AT1G68670.1 37.815 357 156 12 32 351 13 340 1.47e-61 204
Msa1261260 AT1G25550.1 39.697 330 131 13 18 316 2 294 1.78e-55 187
Msa1261260 AT3G25790.1 33.613 357 140 8 19 333 1 302 3.11e-45 160
Msa1261260 AT1G25550.2 38.305 295 118 11 18 285 2 259 3.35e-43 153
Msa1261260 AT4G37180.1 35.452 299 135 9 7 293 16 268 6.65e-39 144
Msa1261260 AT4G37180.2 34.797 296 148 8 7 293 16 275 3.70e-37 139
Msa1261260 AT4G37180.3 34.708 291 132 9 7 285 16 260 3.43e-34 129
Msa1261260 AT1G13300.1 71.765 85 22 1 234 316 180 264 7.12e-34 130
Msa1261260 AT3G25790.2 32.281 285 136 6 19 285 1 246 9.75e-30 116
Msa1261260 AT1G49560.1 64.706 85 25 2 231 314 188 268 1.19e-27 112
Msa1261260 AT1G49560.2 76.364 55 13 0 231 285 188 242 1.57e-20 91.3
Msa1261260 AT4G28610.1 53.333 90 41 1 224 313 214 302 8.52e-19 88.6
Msa1261260 AT5G05090.1 34.932 146 75 4 224 366 70 198 9.09e-16 77.4
Msa1261260 AT2G20400.2 51.899 79 37 1 235 313 231 308 2.30e-14 74.7
Msa1261260 AT2G20400.1 51.899 79 36 1 235 313 231 307 3.32e-14 74.3
Msa1261260 AT3G46640.2 41.489 94 53 2 225 318 134 225 6.01e-14 72.8
Msa1261260 AT3G46640.1 41.489 94 53 2 225 318 134 225 6.01e-14 72.8
Msa1261260 AT2G40970.1 35.200 125 66 2 231 355 101 210 6.63e-14 71.6
Msa1261260 AT3G46640.3 41.489 94 53 2 225 318 134 225 8.14e-14 72.4
Msa1261260 AT3G10760.1 52.381 63 29 1 231 293 101 162 9.96e-14 72.4
Msa1261260 AT5G59570.2 49.231 65 32 1 229 293 135 198 1.80e-13 71.2
Msa1261260 AT5G59570.1 49.231 65 32 1 229 293 135 198 1.80e-13 71.2
Msa1261260 AT2G20570.1 36.486 148 62 5 163 292 76 209 3.80e-13 71.2
Msa1261260 AT2G06020.1 58.182 55 23 0 235 289 86 140 7.08e-13 69.3
Msa1261260 AT3G04030.1 55.172 58 26 0 232 289 42 99 1.58e-12 69.3
Msa1261260 AT5G29000.2 43.820 89 48 1 217 303 211 299 1.64e-12 69.3
Msa1261260 AT5G18240.2 56.897 58 25 0 232 289 42 99 1.77e-12 68.9
Msa1261260 AT5G18240.3 56.897 58 25 0 232 289 42 99 1.77e-12 68.9
Msa1261260 AT5G29000.1 43.820 89 48 1 217 303 168 256 1.79e-12 68.9
Msa1261260 AT5G29000.3 43.820 89 48 1 217 303 168 256 1.79e-12 68.9
Msa1261260 AT3G04030.3 55.172 58 26 0 232 289 42 99 1.82e-12 68.9
Msa1261260 AT2G02060.2 57.692 52 22 0 237 288 31 82 1.96e-12 67.4
Msa1261260 AT2G02060.1 57.692 52 22 0 237 288 31 82 1.96e-12 67.4
Msa1261260 AT5G18240.5 56.897 58 25 0 232 289 42 99 2.02e-12 68.9
Msa1261260 AT5G18240.1 56.897 58 25 0 232 289 42 99 2.04e-12 68.9
Msa1261260 AT5G18240.4 56.897 58 25 0 232 289 42 99 2.04e-12 68.9
Msa1261260 AT5G58080.1 50.000 62 30 1 232 293 191 251 2.94e-12 68.9
Msa1261260 AT2G38300.1 55.769 52 23 0 237 288 56 107 3.78e-12 67.8
Msa1261260 AT5G29000.4 43.678 87 47 1 217 301 211 297 4.78e-12 67.0
Msa1261260 AT3G13040.3 51.613 62 30 0 233 294 239 300 5.58e-12 67.8
Msa1261260 AT3G13040.1 51.613 62 30 0 233 294 239 300 5.58e-12 67.8
Msa1261260 AT3G13040.2 51.613 62 30 0 233 294 239 300 5.58e-12 67.8
Msa1261260 AT2G01760.3 50.769 65 31 1 234 298 134 197 6.14e-12 67.0
Msa1261260 AT2G01760.2 50.769 65 31 1 234 298 227 290 9.66e-12 67.0
Msa1261260 AT2G01760.1 50.769 65 31 1 234 298 199 262 1.03e-11 66.6
Msa1261260 AT2G01060.1 49.296 71 35 1 230 299 9 79 1.08e-11 65.9
Msa1261260 AT5G45580.1 56.364 55 24 0 235 289 7 61 1.18e-11 65.5
Msa1261260 AT5G45580.2 56.364 55 24 0 235 289 23 77 1.37e-11 65.5
Msa1261260 AT1G14600.1 55.769 52 23 0 237 288 25 76 1.82e-11 64.7
Msa1261260 AT3G16857.3 53.333 60 27 1 234 293 166 224 1.84e-11 66.6
Msa1261260 AT3G16857.2 53.333 60 27 1 234 293 236 294 2.42e-11 66.2
Msa1261260 AT3G04450.3 51.667 60 29 0 235 294 238 297 2.46e-11 65.1
Msa1261260 AT3G16857.1 53.333 60 27 1 234 293 236 294 2.51e-11 66.2
Msa1261260 AT5G06800.3 51.667 60 29 0 235 294 192 251 2.98e-11 64.3
Msa1261260 AT3G04450.1 45.833 72 39 0 235 306 238 309 3.03e-11 65.5
Msa1261260 AT3G04450.4 45.833 72 39 0 235 306 198 269 3.14e-11 65.1
Msa1261260 AT3G04450.2 45.833 72 39 0 235 306 198 269 3.14e-11 65.1
Msa1261260 AT2G42660.1 46.250 80 41 1 225 302 38 117 4.67e-11 63.5
Msa1261260 AT1G67710.3 47.887 71 37 0 223 293 107 177 6.64e-11 64.3
Msa1261260 AT1G67710.2 47.887 71 37 0 223 293 116 186 6.97e-11 64.3
Msa1261260 AT5G06800.1 51.667 60 29 0 235 294 192 251 8.00e-11 63.9
Msa1261260 AT5G06800.2 51.667 60 29 0 235 294 192 251 8.70e-11 63.9
Msa1261260 AT1G32240.2 51.724 58 28 0 231 288 209 266 8.88e-11 63.5
Msa1261260 AT5G16560.1 54.545 55 25 0 234 288 218 272 9.55e-11 63.9
Msa1261260 AT1G32240.1 51.724 58 28 0 231 288 209 266 9.55e-11 63.5
Msa1261260 AT5G42630.2 54.545 55 25 0 234 288 104 158 9.83e-11 62.0
Msa1261260 AT1G67710.1 47.887 71 37 0 223 293 181 251 9.93e-11 63.9

Find 134 sgRNAs with CRISPR-Local

Find 184 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACGGAGAGAGATATATAAA+AGG 0.207404 8_2:+63576679 None:intergenic
ATCAACTCCCTTATCTGTTT+TGG 0.218983 8_2:+63575021 None:intergenic
AAATAATGTAATCATTATTA+AGG 0.242268 8_2:+63574303 None:intergenic
TTCTTTAGAGAATGGTAAAA+AGG 0.248797 8_2:+63575862 None:intergenic
TAAATATTATTAGTTAGTTT+TGG 0.269732 8_2:-63574149 Msa1261260:three_prime_UTR
TTTAAGAAATTAGAGTATAG+AGG 0.274487 8_2:-63574277 Msa1261260:three_prime_UTR
AATGATAACAATAACAATAT+TGG 0.280258 8_2:-63575920 Msa1261260:CDS
TCACTGGTATGAATTCTTCT+AGG 0.281572 8_2:+63576086 None:intergenic
TGGAGCCAAACAAGTGAATT+AGG 0.287496 8_2:-63575977 Msa1261260:CDS
TTGTTCCTAATTCACTTGTT+TGG 0.309917 8_2:+63575972 None:intergenic
TTCTTGCTTTCCTATGAGTT+TGG 0.321167 8_2:+63575648 None:intergenic
GGATGACAAGTGCACAATTA+TGG 0.322662 8_2:-63575997 Msa1261260:CDS
AGGGAGTTGATGAAGGTTGA+TGG 0.335126 8_2:-63575009 Msa1261260:CDS
AACTGTAGAAACTAATTTAT+CGG 0.335462 8_2:-63573823 None:intergenic
TCTTGCTTTGTAGTTCTTGT+GGG 0.337014 8_2:+63576641 None:intergenic
GCTCCACCATTTCTATGTTT+AGG 0.345291 8_2:+63575884 None:intergenic
TGTGCTGCAGTTGCATATTC+TGG 0.345650 8_2:+63574665 None:intergenic
CATGCTGGAGAGGTAGAAAA+AGG 0.354964 8_2:-63575761 Msa1261260:CDS
GTTGTTATTGATAGAATTAA+AGG 0.355331 8_2:+63573921 None:intergenic
GGGTTGGAGAGTATCGAAAA+TGG 0.356207 8_2:-63574440 Msa1261260:CDS
CAAGAGCAAAAGAGAGTGTT+TGG 0.366915 8_2:+63576616 None:intergenic
TTATTATTGAACAGAAATAT+AGG 0.370436 8_2:-63574772 Msa1261260:intron
TCCATGTTACTGAAATCATT+TGG 0.380670 8_2:-63576446 Msa1261260:CDS
CGAAGAATTTGTTTCTCGCT+TGG 0.383001 8_2:-63576396 Msa1261260:CDS
ATGTATGTGATAAGGCAAAT+TGG 0.383284 8_2:-63576018 Msa1261260:CDS
AGAATCAGATTCTGACTCTT+GGG 0.388127 8_2:-63573976 Msa1261260:three_prime_UTR
GAAGTTGATCATCAAGGAAA+AGG 0.397063 8_2:-63575719 Msa1261260:CDS
AGGATGAAGGGGAGAGGAAA+GGG 0.399338 8_2:-63574376 Msa1261260:CDS
GGTTTGTTGAAGAGAGTAAT+GGG 0.402056 8_2:-63574355 Msa1261260:CDS
CCAAGTCCAAGTGCACAAAA+TGG 0.410271 8_2:-63574734 Msa1261260:CDS
AGGGGAGTTCTGAGGATGAA+GGG 0.415570 8_2:-63574388 Msa1261260:CDS
CACATGTCTCCGGTGAGCCC+TGG 0.419576 8_2:+63574468 None:intergenic
AAGAATCAGATTCTGACTCT+TGG 0.420642 8_2:-63573977 Msa1261260:three_prime_UTR
ACAAATCTACGGTGCAAGTC+TGG 0.427901 8_2:+63575614 None:intergenic
GGAGGAACCCCTACTCTCTA+TGG 0.427913 8_2:-63574638 Msa1261260:CDS
TTGTTATTGATAGAATTAAA+GGG 0.428376 8_2:+63573922 None:intergenic
TTATTTCTTTCTTTAGAGAA+TGG 0.430461 8_2:+63575854 None:intergenic
GTAGAAGCTAGTGCTAGTTC+AGG 0.432544 8_2:+63575806 None:intergenic
GATGATGATAATTGCTTCAC+TGG 0.434913 8_2:+63576070 None:intergenic
TTCTTGCTTTGTAGTTCTTG+TGG 0.437935 8_2:+63576640 None:intergenic
GGAAGTAGCTGCTGCGGCGG+CGG 0.442713 8_2:+63574536 None:intergenic
ACAATTCAAACCAAACTCAT+AGG 0.443130 8_2:-63575658 Msa1261260:CDS
CAAGACCACGCCACACGGCC+AGG 0.445694 8_2:-63574486 Msa1261260:CDS
GTTAATGCTCTTCAAATGCT+TGG 0.449127 8_2:-63575593 Msa1261260:CDS
GAGGGGAGTTCTGAGGATGA+AGG 0.449245 8_2:-63574389 Msa1261260:CDS
AAATAATAATGTATGTGATA+AGG 0.450078 8_2:-63576026 Msa1261260:CDS
GGTATGAATTCTTCTAGGAT+TGG 0.450439 8_2:+63576091 None:intergenic
ACGGAGAGAGATATATAAAA+GGG 0.452107 8_2:+63576680 None:intergenic
ATTAGTCCTAAACATAGAAA+TGG 0.460300 8_2:-63575890 Msa1261260:CDS
GAGGATGAAGGGGAGAGGAA+AGG 0.465500 8_2:-63574377 Msa1261260:CDS
GGCAACACCAAAACAGATAA+GGG 0.469043 8_2:-63575028 Msa1261260:CDS
AACCCGTCTCCACATGTCTC+CGG 0.479058 8_2:+63574458 None:intergenic
TTAAGAAATTAGAGTATAGA+GGG 0.479086 8_2:-63574276 Msa1261260:three_prime_UTR
GGGGAGTTCTGAGGATGAAG+GGG 0.481259 8_2:-63574387 Msa1261260:CDS
TGAGTTTGTGATGATGCTAC+TGG 0.486233 8_2:+63575692 None:intergenic
AAAACCACCAACTGTGCTGC+TGG 0.488784 8_2:+63574707 None:intergenic
CAGTAGTGTAGTACTGATCT+TGG 0.489595 8_2:+63574561 None:intergenic
CCACATTACTGCACTGCTCC+AGG 0.496026 8_2:-63574584 Msa1261260:CDS
GGGTTTGTTGAAGAGAGTAA+TGG 0.496487 8_2:-63574356 Msa1261260:CDS
TGCATGCAACTTCTCACAAA+CGG 0.497719 8_2:-63576326 Msa1261260:intron
ATATAAAAGGGAAGGTATGT+TGG 0.498558 8_2:+63576692 None:intergenic
ATTATCATCATCAGAAACAT+TGG 0.504933 8_2:-63576059 Msa1261260:CDS
GTTCTGAGGATGAAGGGGAG+AGG 0.509113 8_2:-63574382 Msa1261260:CDS
CAAACCAAGATGCATAGGAT+TGG 0.511312 8_2:+63574243 None:intergenic
CAAATGCTTGGTGGATCTCA+AGG 0.514435 8_2:-63575581 Msa1261260:intron
GATGACCACCATAGAGAGTA+GGG 0.520807 8_2:+63574630 None:intergenic
GAAGAGGATAAGAAACATGC+TGG 0.521576 8_2:-63575776 Msa1261260:CDS
GTGTAGTACTGATCTTGGCC+TGG 0.523675 8_2:+63574566 None:intergenic
TGGCAACACCAAAACAGATA+AGG 0.524534 8_2:-63575029 Msa1261260:CDS
ATCACCATCTGAACTAGGCT+TGG 0.524881 8_2:-63576489 Msa1261260:CDS
GGCGGAAGTAGCTGCTGCGG+CGG 0.525740 8_2:+63574533 None:intergenic
GAGAGTAGTAGCTGGAAAGA+GGG 0.527047 8_2:-63574407 Msa1261260:CDS
AAGTTGATCATCAAGGAAAA+GGG 0.527682 8_2:-63575718 Msa1261260:CDS
CTACTACAACGGTCCACATA+GGG 0.529377 8_2:-63574000 Msa1261260:three_prime_UTR
CACCGGAGACATGTGGAGAC+GGG 0.529522 8_2:-63574460 Msa1261260:CDS
CTTGCTTTGTAGTTCTTGTG+GGG 0.530429 8_2:+63576642 None:intergenic
AGAGTGAGATGATGAGAAGT+AGG 0.531857 8_2:+63574608 None:intergenic
GAAGAGCATTAACAAATCTA+CGG 0.536877 8_2:+63575603 None:intergenic
GGTTGGAGAGTATCGAAAAT+GGG 0.536939 8_2:-63574439 Msa1261260:CDS
ATATGACAAAATAGAAAAGA+AGG 0.537548 8_2:+63576572 None:intergenic
TCCAAATGATTTCAGTAACA+TGG 0.537583 8_2:+63576445 None:intergenic
TCACCGGAGACATGTGGAGA+CGG 0.539768 8_2:-63574461 Msa1261260:CDS
ATGGCATCACCATCTGAACT+AGG 0.543239 8_2:-63576494 Msa1261260:CDS
CAATCCAAGCCTAGTTCAGA+TGG 0.544635 8_2:+63576485 None:intergenic
TGAAGTTAAAAGCCATCTGC+AGG 0.544962 8_2:-63574974 Msa1261260:intron
GGAGAGTAGTAGCTGGAAAG+AGG 0.546618 8_2:-63574408 Msa1261260:CDS
AATGCTCTTCAAATGCTTGG+TGG 0.549954 8_2:-63575590 Msa1261260:CDS
GAATCTGATTCTTCCCTATG+TGG 0.550071 8_2:+63573987 None:intergenic
ACAGATAAGGGAGTTGATGA+AGG 0.551674 8_2:-63575016 Msa1261260:CDS
GAATCAGATTCTGACTCTTG+GGG 0.555795 8_2:-63573975 Msa1261260:three_prime_UTR
TGCACCAGCAGCACAGTTGG+TGG 0.556042 8_2:-63574711 Msa1261260:CDS
GGATGACCACCATAGAGAGT+AGG 0.564523 8_2:+63574629 None:intergenic
CAAGCGTTCAGATCGAATCA+AGG 0.564819 8_2:-63576121 Msa1261260:CDS
GGATAAGAAACATGCTGGAG+AGG 0.570240 8_2:-63575771 Msa1261260:CDS
ACTACTACAACGGTCCACAT+AGG 0.571850 8_2:-63574001 Msa1261260:three_prime_UTR
AGACGTCGGAGAGTAGTAGC+TGG 0.573303 8_2:-63574415 Msa1261260:CDS
TCTAACAAACCAAGATGCAT+AGG 0.574823 8_2:+63574238 None:intergenic
AAGACCACGCCACACGGCCA+GGG 0.575388 8_2:-63574485 Msa1261260:CDS
TATGCAACTGCAGCACATGC+AGG 0.576335 8_2:-63574659 Msa1261260:CDS
TTGCTTTGTAGTTCTTGTGG+GGG 0.576354 8_2:+63576643 None:intergenic
GAGAGAGAATTACCTGCAGA+TGG 0.576980 8_2:+63574962 None:intergenic
GGGAATGAAGTTGATCATCA+AGG 0.578253 8_2:-63575725 Msa1261260:CDS
AGTCCTAAACATAGAAATGG+TGG 0.579197 8_2:-63575887 Msa1261260:CDS
GTGAGAAGTTGCATGCAAAG+AGG 0.581636 8_2:+63576332 None:intergenic
AGAGAGATATATAAAAGGGA+AGG 0.586210 8_2:+63576684 None:intergenic
GGAGACATGTGGAGACGGGT+TGG 0.587274 8_2:-63574456 Msa1261260:CDS
AGAAATAACTCCTCTTGTCA+AGG 0.588185 8_2:-63575839 Msa1261260:CDS
GCTGCAGTTGCATATTCTGG+TGG 0.594788 8_2:+63574668 None:intergenic
TGAGCCCTGGCCGTGTGGCG+TGG 0.599919 8_2:+63574481 None:intergenic
TGGTGCACCAGCAGCACAGT+TGG 0.601815 8_2:-63574714 Msa1261260:CDS
ATAGGAAAGCAAGAAGGTGT+TGG 0.602381 8_2:-63575640 Msa1261260:CDS
CTGCAGTTGCATATTCTGGT+GGG 0.605931 8_2:+63574669 None:intergenic
TCTGTTATGTACTACTACAA+CGG 0.613011 8_2:-63574011 Msa1261260:three_prime_UTR
AGTAACATGGAGTAGCTATG+TGG 0.617118 8_2:+63576458 None:intergenic
TCCGGTGAGCCCTGGCCGTG+TGG 0.619373 8_2:+63574476 None:intergenic
TGGTGCATGTGATGAGGTGG+CGG 0.620813 8_2:+63574515 None:intergenic
AACTCCTCTTGTCAAGGACA+AGG 0.622383 8_2:-63575833 Msa1261260:CDS
GTGGCGTGGTCTTGTAGACA+TGG 0.624325 8_2:+63574495 None:intergenic
CTGGAAAGAGGGGAGTTCTG+AGG 0.624534 8_2:-63574396 Msa1261260:CDS
GGTGGCGGAAGTAGCTGCTG+CGG 0.626284 8_2:+63574530 None:intergenic
AGAGTAGTAGCTGGAAAGAG+GGG 0.629458 8_2:-63574406 Msa1261260:CDS
AAGACCTTGTCCTTGACAAG+AGG 0.632597 8_2:+63575829 None:intergenic
AAACTCATAGGAAAGCAAGA+AGG 0.642113 8_2:-63575646 Msa1261260:CDS
CAGGGCTCACCGGAGACATG+TGG 0.647061 8_2:-63574467 Msa1261260:CDS
GTCTACAAGACCACGCCACA+CGG 0.648472 8_2:-63574491 Msa1261260:CDS
ACATGGTGCATGTGATGAGG+TGG 0.655489 8_2:+63574512 None:intergenic
CCTGGAGCAGTGCAGTAATG+TGG 0.657609 8_2:+63574584 None:intergenic
TTAGTTTCTACAGTTACACG+TGG 0.660459 8_2:+63573831 None:intergenic
TGACAAAATAGAAAAGAAGG+TGG 0.666587 8_2:+63576575 None:intergenic
TAGACATGGTGCATGTGATG+AGG 0.673422 8_2:+63574509 None:intergenic
GCAACTGCAGCACATGCAGG+AGG 0.687455 8_2:-63574656 Msa1261260:CDS
GGAACCCCTACTCTCTATGG+TGG 0.690464 8_2:-63574635 Msa1261260:CDS
TATCGAAAATGGGAAGACGT+CGG 0.708197 8_2:-63574429 Msa1261260:CDS
ATGACCACCATAGAGAGTAG+GGG 0.721767 8_2:+63574631 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAAATTATTATATATTTA+AGG - chr8_2:63575233-63575252 Msa1261260:intron 0.0%
!! TAAAATTATTATATATTTAA+GGG - chr8_2:63575234-63575253 Msa1261260:intron 0.0%
!! AAATAATGTAATCATTATTA+AGG + chr8_2:63576218-63576237 None:intergenic 10.0%
!!! TAAATATTATTAGTTAGTTT+TGG - chr8_2:63576369-63576388 Msa1261260:CDS 10.0%
!!! TTAGTTTTTTTAACAAAGAA+TGG - chr8_2:63574005-63574024 Msa1261260:three_prime_UTR 15.0%
!! GTTACATATAAAAGAAAAAA+AGG + chr8_2:63574233-63574252 None:intergenic 15.0%
!! AAATAATAATGTATGTGATA+AGG - chr8_2:63574492-63574511 Msa1261260:CDS 15.0%
!! AATGATAACAATAACAATAT+TGG - chr8_2:63574598-63574617 Msa1261260:CDS 15.0%
!! ATACTATAAAAAAGAATAGA+TGG - chr8_2:63575060-63575079 Msa1261260:intron 15.0%
!! TTTCTTTATAAAATAGTCTT+AGG - chr8_2:63575115-63575134 Msa1261260:intron 15.0%
!! AAATTTAGTCAAATGTTATT+AGG - chr8_2:63575346-63575365 Msa1261260:intron 15.0%
!!! AAATGTTTGATTTATTATAG+TGG - chr8_2:63575469-63575488 Msa1261260:intron 15.0%
!! TTATTATTGAACAGAAATAT+AGG - chr8_2:63575746-63575765 Msa1261260:CDS 15.0%
!!! TTGTTATTGATAGAATTAAA+GGG + chr8_2:63576599-63576618 None:intergenic 15.0%
!! ATATGACAAAATAGAAAAGA+AGG + chr8_2:63573949-63573968 None:intergenic 20.0%
!! ACATATAAAAGAAAAAAAGG+TGG + chr8_2:63574230-63574249 None:intergenic 20.0%
!!! GTTATCATTAATTTCTTTTG+TGG + chr8_2:63574587-63574606 None:intergenic 20.0%
!!! TTATTTCTTTCTTTAGAGAA+TGG + chr8_2:63574667-63574686 None:intergenic 20.0%
!! AAAAAGGTAAAACAAATTCA+GGG - chr8_2:63574773-63574792 Msa1261260:intron 20.0%
!! GCAAAAGAAAACATATAATA+AGG + chr8_2:63575032-63575051 None:intergenic 20.0%
!!! ATCACTCTCAAATTTTAATT+AGG - chr8_2:63576192-63576211 Msa1261260:intron 20.0%
!! TTTAAGAAATTAGAGTATAG+AGG - chr8_2:63576241-63576260 Msa1261260:intron 20.0%
!! TTAAGAAATTAGAGTATAGA+GGG - chr8_2:63576242-63576261 Msa1261260:intron 20.0%
!!! GTTGTTATTGATAGAATTAA+AGG + chr8_2:63576600-63576619 None:intergenic 20.0%
!!! AGTTTCAACTTTAGTATTTT+TGG - chr8_2:63576647-63576666 Msa1261260:five_prime_UTR 20.0%
! TATCAGATAAGATTTGAACT+CGG + chr8_2:63574289-63574308 None:intergenic 25.0%
! ATTATCATCATCAGAAACAT+TGG - chr8_2:63574459-63574478 Msa1261260:CDS 25.0%
! ATTAGTCCTAAACATAGAAA+TGG - chr8_2:63574628-63574647 Msa1261260:CDS 25.0%
!! TTCTTTAGAGAATGGTAAAA+AGG + chr8_2:63574659-63574678 None:intergenic 25.0%
! GAAAAAGGTAAAACAAATTC+AGG - chr8_2:63574772-63574791 Msa1261260:intron 25.0%
! TAATTGATACTAGTGGTATT+GGG + chr8_2:63575173-63575192 None:intergenic 25.0%
! ATAATTGATACTAGTGGTAT+TGG + chr8_2:63575174-63575193 None:intergenic 25.0%
! AATACCACTAGTATCAATTA+TGG - chr8_2:63575173-63575192 Msa1261260:intron 25.0%
!!! GACACAATAGTTTTTCAAAT+GGG - chr8_2:63575256-63575275 Msa1261260:intron 25.0%
!! CTTTTGTATTTTACTTTGCT+TGG - chr8_2:63575682-63575701 Msa1261260:CDS 25.0%
!!! AGTTTTGGATGAATTTTATG+TGG - chr8_2:63576384-63576403 Msa1261260:CDS 25.0%
! ATATAAAAGGGAAGGTATGT+TGG + chr8_2:63573829-63573848 None:intergenic 30.0%
AGAGAGATATATAAAAGGGA+AGG + chr8_2:63573837-63573856 None:intergenic 30.0%
ACGGAGAGAGATATATAAAA+GGG + chr8_2:63573841-63573860 None:intergenic 30.0%
TGACAAAATAGAAAAGAAGG+TGG + chr8_2:63573946-63573965 None:intergenic 30.0%
TCCATGTTACTGAAATCATT+TGG - chr8_2:63574072-63574091 Msa1261260:three_prime_UTR 30.0%
TCCAAATGATTTCAGTAACA+TGG + chr8_2:63574076-63574095 None:intergenic 30.0%
ATGTATGTGATAAGGCAAAT+TGG - chr8_2:63574500-63574519 Msa1261260:CDS 30.0%
TTGTTCCTAATTCACTTGTT+TGG + chr8_2:63574549-63574568 None:intergenic 30.0%
! AAGTTGATCATCAAGGAAAA+GGG - chr8_2:63574800-63574819 Msa1261260:intron 30.0%
ACAATTCAAACCAAACTCAT+AGG - chr8_2:63574860-63574879 Msa1261260:intron 30.0%
!! GAAGAGCATTAACAAATCTA+CGG + chr8_2:63574918-63574937 None:intergenic 30.0%
!! GGACACAATAGTTTTTCAAA+TGG - chr8_2:63575255-63575274 Msa1261260:intron 30.0%
!!! ATGGCTTTTAACTTCATCAT+TGG + chr8_2:63575540-63575559 None:intergenic 30.0%
TAATTCTCTCTCTCAGTTTA+AGG - chr8_2:63575567-63575586 Msa1261260:intron 30.0%
!! ATATTGCATGCAGTTTTTAG+TGG - chr8_2:63576421-63576440 Msa1261260:CDS 30.0%
!!! TATTGCATGCAGTTTTTAGT+GGG - chr8_2:63576422-63576441 Msa1261260:CDS 30.0%
!!! AGTTTTTAGTGGGGTTAAAA+AGG - chr8_2:63576432-63576451 Msa1261260:CDS 30.0%
TTAAAAAGGACAGAAAAGTG+AGG - chr8_2:63576446-63576465 Msa1261260:CDS 30.0%
TCTGTTATGTACTACTACAA+CGG - chr8_2:63576507-63576526 Msa1261260:exon 30.0%
GACGGAGAGAGATATATAAA+AGG + chr8_2:63573842-63573861 None:intergenic 35.0%
TCTTGCTTTGTAGTTCTTGT+GGG + chr8_2:63573880-63573899 None:intergenic 35.0%
TTCTTGCTTTGTAGTTCTTG+TGG + chr8_2:63573881-63573900 None:intergenic 35.0%
!! GGTATGAATTCTTCTAGGAT+TGG + chr8_2:63574430-63574449 None:intergenic 35.0%
TCACTGGTATGAATTCTTCT+AGG + chr8_2:63574435-63574454 None:intergenic 35.0%
GATGATGATAATTGCTTCAC+TGG + chr8_2:63574451-63574470 None:intergenic 35.0%
AGTCCTAAACATAGAAATGG+TGG - chr8_2:63574631-63574650 Msa1261260:CDS 35.0%
AGAAATAACTCCTCTTGTCA+AGG - chr8_2:63574679-63574698 Msa1261260:CDS 35.0%
AGCTTCTACTCAAAAAGAAG+AGG - chr8_2:63574726-63574745 Msa1261260:CDS 35.0%
! GAAGTTGATCATCAAGGAAA+AGG - chr8_2:63574799-63574818 Msa1261260:intron 35.0%
TTCTTGCTTTCCTATGAGTT+TGG + chr8_2:63574873-63574892 None:intergenic 35.0%
AAACTCATAGGAAAGCAAGA+AGG - chr8_2:63574872-63574891 Msa1261260:intron 35.0%
GTTAATGCTCTTCAAATGCT+TGG - chr8_2:63574925-63574944 Msa1261260:intron 35.0%
AGAGCCATAATTGATACTAG+TGG + chr8_2:63575180-63575199 None:intergenic 35.0%
! ATCAACTCCCTTATCTGTTT+TGG + chr8_2:63575500-63575519 None:intergenic 35.0%
AGTACAGCAACAAACAACAA+AGG + chr8_2:63575625-63575644 None:intergenic 35.0%
AGTTCGTTATAAGTTGTCAG+AGG + chr8_2:63575664-63575683 None:intergenic 35.0%
!! GGTTTGTTGAAGAGAGTAAT+GGG - chr8_2:63576163-63576182 Msa1261260:intron 35.0%
! TTTTCCAATCCTATGCATCT+TGG - chr8_2:63576271-63576290 Msa1261260:intron 35.0%
TCTAACAAACCAAGATGCAT+AGG + chr8_2:63576283-63576302 None:intergenic 35.0%
! TTGGATGAATTTTATGTGGC+AGG - chr8_2:63576388-63576407 Msa1261260:CDS 35.0%
!!! ATTGCATGCAGTTTTTAGTG+GGG - chr8_2:63576423-63576442 Msa1261260:CDS 35.0%
AAGAATCAGATTCTGACTCT+TGG - chr8_2:63576541-63576560 Msa1261260:five_prime_UTR 35.0%
AGAATCAGATTCTGACTCTT+GGG - chr8_2:63576542-63576561 Msa1261260:five_prime_UTR 35.0%
TTAGTTTCTACAGTTACACG+TGG + chr8_2:63576690-63576709 None:intergenic 35.0%
TTGCTTTGTAGTTCTTGTGG+GGG + chr8_2:63573878-63573897 None:intergenic 40.0%
CTTGCTTTGTAGTTCTTGTG+GGG + chr8_2:63573879-63573898 None:intergenic 40.0%
!! CAAGAGCAAAAGAGAGTGTT+TGG + chr8_2:63573905-63573924 None:intergenic 40.0%
AGTAACATGGAGTAGCTATG+TGG + chr8_2:63574063-63574082 None:intergenic 40.0%
! CGAAGAATTTGTTTCTCGCT+TGG - chr8_2:63574122-63574141 Msa1261260:three_prime_UTR 40.0%
TGCATGCAACTTCTCACAAA+CGG - chr8_2:63574192-63574211 Msa1261260:three_prime_UTR 40.0%
GGATGACAAGTGCACAATTA+TGG - chr8_2:63574521-63574540 Msa1261260:CDS 40.0%
TGGAGCCAAACAAGTGAATT+AGG - chr8_2:63574541-63574560 Msa1261260:CDS 40.0%
GCTCCACCATTTCTATGTTT+AGG + chr8_2:63574637-63574656 None:intergenic 40.0%
GAAGAGGATAAGAAACATGC+TGG - chr8_2:63574742-63574761 Msa1261260:CDS 40.0%
! GGGAATGAAGTTGATCATCA+AGG - chr8_2:63574793-63574812 Msa1261260:intron 40.0%
! TGAGTTTGTGATGATGCTAC+TGG + chr8_2:63574829-63574848 None:intergenic 40.0%
! ATAGGAAAGCAAGAAGGTGT+TGG - chr8_2:63574878-63574897 Msa1261260:intron 40.0%
AATGCTCTTCAAATGCTTGG+TGG - chr8_2:63574928-63574947 Msa1261260:intron 40.0%
GGGCTTATTCATTGTGACTT+AGG - chr8_2:63575276-63575295 Msa1261260:intron 40.0%
TGACTTAGGTAGTACTAGCA+AGG - chr8_2:63575290-63575309 Msa1261260:intron 40.0%
TTCACATCTCTGCTTGATTC+TGG + chr8_2:63575328-63575347 None:intergenic 40.0%
TGGCAACACCAAAACAGATA+AGG - chr8_2:63575489-63575508 Msa1261260:intron 40.0%
GGCAACACCAAAACAGATAA+GGG - chr8_2:63575490-63575509 Msa1261260:intron 40.0%
!! ACAGATAAGGGAGTTGATGA+AGG - chr8_2:63575502-63575521 Msa1261260:intron 40.0%
TGAAGTTAAAAGCCATCTGC+AGG - chr8_2:63575544-63575563 Msa1261260:intron 40.0%
!!! TGGTGGTTTTAGGAGGAATA+TGG - chr8_2:63575824-63575843 Msa1261260:CDS 40.0%
!!! GGTGGTTTTAGGAGGAATAT+GGG - chr8_2:63575825-63575844 Msa1261260:CDS 40.0%
AGAGTGAGATGATGAGAAGT+AGG + chr8_2:63575913-63575932 None:intergenic 40.0%
!! CAGTAGTGTAGTACTGATCT+TGG + chr8_2:63575960-63575979 None:intergenic 40.0%
!! GGTTGGAGAGTATCGAAAAT+GGG - chr8_2:63576079-63576098 Msa1261260:CDS 40.0%
TATCGAAAATGGGAAGACGT+CGG - chr8_2:63576089-63576108 Msa1261260:CDS 40.0%
!! GGGTTTGTTGAAGAGAGTAA+TGG - chr8_2:63576162-63576181 Msa1261260:intron 40.0%
CAAACCAAGATGCATAGGAT+TGG + chr8_2:63576278-63576297 None:intergenic 40.0%
GAATCTGATTCTTCCCTATG+TGG + chr8_2:63576534-63576553 None:intergenic 40.0%
GAATCAGATTCTGACTCTTG+GGG - chr8_2:63576543-63576562 Msa1261260:five_prime_UTR 40.0%
ATGGCATCACCATCTGAACT+AGG - chr8_2:63574024-63574043 Msa1261260:three_prime_UTR 45.0%
ATCACCATCTGAACTAGGCT+TGG - chr8_2:63574029-63574048 Msa1261260:three_prime_UTR 45.0%
CAATCCAAGCCTAGTTCAGA+TGG + chr8_2:63574036-63574055 None:intergenic 45.0%
GTGAGAAGTTGCATGCAAAG+AGG + chr8_2:63574189-63574208 None:intergenic 45.0%
! TCGTGCACAATTTTCAGCGA+TGG - chr8_2:63574354-63574373 Msa1261260:CDS 45.0%
CAAGCGTTCAGATCGAATCA+AGG - chr8_2:63574397-63574416 Msa1261260:CDS 45.0%
AACTCCTCTTGTCAAGGACA+AGG - chr8_2:63574685-63574704 Msa1261260:CDS 45.0%
AAGACCTTGTCCTTGACAAG+AGG + chr8_2:63574692-63574711 None:intergenic 45.0%
GTAGAAGCTAGTGCTAGTTC+AGG + chr8_2:63574715-63574734 None:intergenic 45.0%
GGATAAGAAACATGCTGGAG+AGG - chr8_2:63574747-63574766 Msa1261260:CDS 45.0%
CATGCTGGAGAGGTAGAAAA+AGG - chr8_2:63574757-63574776 Msa1261260:CDS 45.0%
ACAAATCTACGGTGCAAGTC+TGG + chr8_2:63574907-63574926 None:intergenic 45.0%
! CAAATGCTTGGTGGATCTCA+AGG - chr8_2:63574937-63574956 Msa1261260:intron 45.0%
!! AGGGAGTTGATGAAGGTTGA+TGG - chr8_2:63575509-63575528 Msa1261260:intron 45.0%
GAGAGAGAATTACCTGCAGA+TGG + chr8_2:63575559-63575578 None:intergenic 45.0%
! CCATTTTGTGCACTTGGACT+TGG + chr8_2:63575787-63575806 None:intergenic 45.0%
CCAAGTCCAAGTGCACAAAA+TGG - chr8_2:63575784-63575803 Msa1261260:CDS 45.0%
CTGCAGTTGCATATTCTGGT+GGG + chr8_2:63575852-63575871 None:intergenic 45.0%
TGTGCTGCAGTTGCATATTC+TGG + chr8_2:63575856-63575875 None:intergenic 45.0%
ATGACCACCATAGAGAGTAG+GGG + chr8_2:63575890-63575909 None:intergenic 45.0%
GATGACCACCATAGAGAGTA+GGG + chr8_2:63575891-63575910 None:intergenic 45.0%
TAGACATGGTGCATGTGATG+AGG + chr8_2:63576012-63576031 None:intergenic 45.0%
!! GGGTTGGAGAGTATCGAAAA+TGG - chr8_2:63576078-63576097 Msa1261260:CDS 45.0%
GAGAGTAGTAGCTGGAAAGA+GGG - chr8_2:63576111-63576130 Msa1261260:CDS 45.0%
AGAGTAGTAGCTGGAAAGAG+GGG - chr8_2:63576112-63576131 Msa1261260:CDS 45.0%
ACTACTACAACGGTCCACAT+AGG - chr8_2:63576517-63576536 Msa1261260:five_prime_UTR 45.0%
CTACTACAACGGTCCACATA+GGG - chr8_2:63576518-63576537 Msa1261260:five_prime_UTR 45.0%
! TTCTGACTCTTGGGGTTTTC+TGG - chr8_2:63576551-63576570 Msa1261260:five_prime_UTR 45.0%
TGTAGTTCTTGTGGGGGAGA+GGG + chr8_2:63573872-63573891 None:intergenic 50.0%
TTGTAGTTCTTGTGGGGGAG+AGG + chr8_2:63573873-63573892 None:intergenic 50.0%
! GGTGCACCATTTTGTGCACT+TGG + chr8_2:63575793-63575812 None:intergenic 50.0%
AAAACCACCAACTGTGCTGC+TGG + chr8_2:63575814-63575833 None:intergenic 50.0%
!!! GCAGCACAGTTGGTGGTTTT+AGG - chr8_2:63575814-63575833 Msa1261260:CDS 50.0%
!!! GCACAGTTGGTGGTTTTAGG+AGG - chr8_2:63575817-63575836 Msa1261260:CDS 50.0%
GCTGCAGTTGCATATTCTGG+TGG + chr8_2:63575853-63575872 None:intergenic 50.0%
TATGCAACTGCAGCACATGC+AGG - chr8_2:63575859-63575878 Msa1261260:CDS 50.0%
GGATGACCACCATAGAGAGT+AGG + chr8_2:63575892-63575911 None:intergenic 50.0%
!! GTGTAGTACTGATCTTGGCC+TGG + chr8_2:63575955-63575974 None:intergenic 50.0%
ACATGGTGCATGTGATGAGG+TGG + chr8_2:63576009-63576028 None:intergenic 50.0%
GGAGAGTAGTAGCTGGAAAG+AGG - chr8_2:63576110-63576129 Msa1261260:CDS 50.0%
!! AGGGGAGTTCTGAGGATGAA+GGG - chr8_2:63576130-63576149 Msa1261260:CDS 50.0%
AGGATGAAGGGGAGAGGAAA+GGG - chr8_2:63576142-63576161 Msa1261260:CDS 50.0%
GGAGGAACCCCTACTCTCTA+TGG - chr8_2:63575880-63575899 Msa1261260:CDS 55.0%
GGAACCCCTACTCTCTATGG+TGG - chr8_2:63575883-63575902 Msa1261260:CDS 55.0%
CCTGGAGCAGTGCAGTAATG+TGG + chr8_2:63575937-63575956 None:intergenic 55.0%
CCACATTACTGCACTGCTCC+AGG - chr8_2:63575934-63575953 Msa1261260:CDS 55.0%
TGGTGCATGTGATGAGGTGG+CGG + chr8_2:63576006-63576025 None:intergenic 55.0%
!! GTGGCGTGGTCTTGTAGACA+TGG + chr8_2:63576026-63576045 None:intergenic 55.0%
GTCTACAAGACCACGCCACA+CGG - chr8_2:63576027-63576046 Msa1261260:CDS 55.0%
TCACCGGAGACATGTGGAGA+CGG - chr8_2:63576057-63576076 Msa1261260:CDS 55.0%
AACCCGTCTCCACATGTCTC+CGG + chr8_2:63576063-63576082 None:intergenic 55.0%
AGACGTCGGAGAGTAGTAGC+TGG - chr8_2:63576103-63576122 Msa1261260:CDS 55.0%
CTGGAAAGAGGGGAGTTCTG+AGG - chr8_2:63576122-63576141 Msa1261260:CDS 55.0%
!! GAGGGGAGTTCTGAGGATGA+AGG - chr8_2:63576129-63576148 Msa1261260:CDS 55.0%
!! GGGGAGTTCTGAGGATGAAG+GGG - chr8_2:63576131-63576150 Msa1261260:CDS 55.0%
!! GTTCTGAGGATGAAGGGGAG+AGG - chr8_2:63576136-63576155 Msa1261260:CDS 55.0%
GAGGATGAAGGGGAGAGGAA+AGG - chr8_2:63576141-63576160 Msa1261260:CDS 55.0%
TGGTGCACCAGCAGCACAGT+TGG - chr8_2:63575804-63575823 Msa1261260:CDS 60.0%
TGCACCAGCAGCACAGTTGG+TGG - chr8_2:63575807-63575826 Msa1261260:CDS 60.0%
GCAACTGCAGCACATGCAGG+AGG - chr8_2:63575862-63575881 Msa1261260:CDS 60.0%
CACCGGAGACATGTGGAGAC+GGG - chr8_2:63576058-63576077 Msa1261260:CDS 60.0%
GGAGACATGTGGAGACGGGT+TGG - chr8_2:63576062-63576081 Msa1261260:CDS 60.0%
GGGGGAGAGGGAGAGAGAGA+CGG + chr8_2:63573860-63573879 None:intergenic 65.0%
!! GGTGGCGGAAGTAGCTGCTG+CGG + chr8_2:63575991-63576010 None:intergenic 65.0%
AAGACCACGCCACACGGCCA+GGG - chr8_2:63576033-63576052 Msa1261260:CDS 65.0%
CACATGTCTCCGGTGAGCCC+TGG + chr8_2:63576053-63576072 None:intergenic 65.0%
CAGGGCTCACCGGAGACATG+TGG - chr8_2:63576051-63576070 Msa1261260:CDS 65.0%
GGAAGTAGCTGCTGCGGCGG+CGG + chr8_2:63575985-63576004 None:intergenic 70.0%
GGCGGAAGTAGCTGCTGCGG+CGG + chr8_2:63575988-63576007 None:intergenic 70.0%
CAAGACCACGCCACACGGCC+AGG - chr8_2:63576032-63576051 Msa1261260:CDS 70.0%
TGAGCCCTGGCCGTGTGGCG+TGG + chr8_2:63576040-63576059 None:intergenic 75.0%
GCCACACGGCCAGGGCTCAC+CGG - chr8_2:63576041-63576060 Msa1261260:CDS 75.0%
TCCGGTGAGCCCTGGCCGTG+TGG + chr8_2:63576045-63576064 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 63573824 63576716 63573824 ID=Msa1261260;Name=Msa1261260
chr8_2 mRNA 63573824 63576716 63573824 ID=Msa1261260-mRNA-1;Parent=Msa1261260;Name=Msa1261260-mRNA-1;_AED=0.03;_eAED=0.03;_QI=200|1|1|1|1|1|4|507|434
chr8_2 exon 63573824 63574780 63573824 ID=Msa1261260-mRNA-1:exon:20335;Parent=Msa1261260-mRNA-1
chr8_2 exon 63574975 63575051 63574975 ID=Msa1261260-mRNA-1:exon:20334;Parent=Msa1261260-mRNA-1
chr8_2 exon 63575582 63576169 63575582 ID=Msa1261260-mRNA-1:exon:20333;Parent=Msa1261260-mRNA-1
chr8_2 exon 63576327 63576716 63576327 ID=Msa1261260-mRNA-1:exon:20332;Parent=Msa1261260-mRNA-1
chr8_2 five_prime_UTR 63576517 63576716 63576517 ID=Msa1261260-mRNA-1:five_prime_utr;Parent=Msa1261260-mRNA-1
chr8_2 CDS 63576327 63576516 63576327 ID=Msa1261260-mRNA-1:cds;Parent=Msa1261260-mRNA-1
chr8_2 CDS 63575582 63576169 63575582 ID=Msa1261260-mRNA-1:cds;Parent=Msa1261260-mRNA-1
chr8_2 CDS 63574975 63575051 63574975 ID=Msa1261260-mRNA-1:cds;Parent=Msa1261260-mRNA-1
chr8_2 CDS 63574331 63574780 63574331 ID=Msa1261260-mRNA-1:cds;Parent=Msa1261260-mRNA-1
chr8_2 three_prime_UTR 63573824 63574330 63573824 ID=Msa1261260-mRNA-1:three_prime_utr;Parent=Msa1261260-mRNA-1
Gene Sequence

>Msa1261260

ATGGCATCACCATCTGAACTAGGCTTGGATTGCAAGCCACATAGCTACTCCATGTTACTGAAATCATTTGGAGAACAAAGTGATCAAAGCTACAAACTCGAAGAATTTGTTTCTCGCTTGGAAGAAGAACGTCTCAAAATCGATGCTTTCAAACGTGAGCTTCCTCTTTGCATGCAACTTCTCACAAACGCGATGGAAGCTTCGAAGCAGCAACTTCAAGCGTTCAGATCGAATCAAGGAGCAAAACCAATCCTAGAAGAATTCATACCAGTGAAGCAATTATCATCATCAGAAACATTGGAAAAGACAACAAATAATAATGTATGTGATAAGGCAAATTGGATGACAAGTGCACAATTATGGAGCCAAACAAGTGAATTAGGAACAAAACAACAACAAAATTCCACAAAAGAAATTAATGATAACAATAACAATATTGGATTTAACATTAGTCCTAAACATAGAAATGGTGGAGCCTTTTTACCATTCTCTAAAGAAAGAAATAACTCCTCTTGTCAAGGACAAGGTCTTCCTGAACTAGCACTAGCTTCTACTCAAAAAGAAGAGGATAAGAAACATGCTGGAGAGGTAGAAAAAGGTAAAACAAATTCAGGGAATGAAGTTGATCATCAAGGAAAAGGGAGTCCAGTAGCATCATCACAAACTCAGACAACAAGCAACAATTCAAACCAAACTCATAGGAAAGCAAGAAGGTGTTGGTCACCAGACTTGCACCGTAGATTTGTTAATGCTCTTCAAATGCTTGGTGGATCTCAAGTGGCAACACCAAAACAGATAAGGGAGTTGATGAAGGTTGATGGTTTGACCAATGATGAAGTTAAAAGCCATCTGCAGAAATATAGGCTACACACAAGAAGACCAAGTCCAAGTGCACAAAATGGTGCACCAGCAGCACAGTTGGTGGTTTTAGGAGGAATATGGGTCCCACCAGAATATGCAACTGCAGCACATGCAGGAGGAACCCCTACTCTCTATGGTGGTCATCCTACTTCTCATCATCTCACTCTGCCACATTACTGCACTGCTCCAGGCCAAGATCAGTACTACACTACTGCACCGCCGCCGCAGCAGCTACTTCCGCCACCTCATCACATGCACCATGTCTACAAGACCACGCCACACGGCCAGGGCTCACCGGAGACATGTGGAGACGGGTTGGAGAGTATCGAAAATGGGAAGACGTCGGAGAGTAGTAGCTGGAAAGAGGGGAGTTCTGAGGATGAAGGGGAGAGGAAAGGGTTTGTTGAAGAGAGTAATGGGAGTGAAATCACTCTCAAATTTTAA
Protein sequence

>Msa1261260

MASPSELGLDCKPHSYSMLLKSFGEQSDQSYKLEEFVSRLEEERLKIDAFKRELPLCMQLLTNAMEASKQQLQAFRSNQGAKPILEEFIPVKQLSSSETLEKTTNNNVCDKANWMTSAQLWSQTSELGTKQQQNSTKEINDNNNNIGFNISPKHRNGGAFLPFSKERNNSSCQGQGLPELALASTQKEEDKKHAGEVEKGKTNSGNEVDHQGKGSPVASSQTQTTSNNSNQTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSPSAQNGAPAAQLVVLGGIWVPPEYATAAHAGGTPTLYGGHPTSHHLTLPHYCTAPGQDQYYTTAPPPQQLLPPPHHMHHVYKTTPHGQGSPETCGDGLESIENGKTSESSSWKEGSSEDEGERKGFVEESNGSEITLKF*