AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1214290

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1214290 MtrunA17_Chr4g0062821 99.020 510 5 0 1 510 1 510 0.0 1044
Msa1214290 MtrunA17_Chr1g0148671 59.880 501 185 6 1 497 1 489 0.0 639
Msa1214290 MtrunA17_Chr3g0138441 59.237 498 189 6 1 491 1 491 0.0 624
Msa1214290 MtrunA17_Chr6g0458891 52.590 502 210 5 1 483 1 493 0.0 532
Msa1214290 MtrunA17_Chr3g0119261 50.838 537 232 4 1 508 1 534 0.0 531
Msa1214290 MtrunA17_Chr3g0123051 51.200 500 228 4 1 484 1 500 0.0 524
Msa1214290 MtrunA17_Chr7g0264871 51.534 489 209 7 11 496 3 466 3.81e-180 514
Msa1214290 MtrunA17_Chr1g0180401 53.165 474 206 7 15 484 15 476 3.52e-175 502
Msa1214290 MtrunA17_Chr1g0210311 48.770 488 230 5 5 484 1 476 5.54e-170 489
Msa1214290 MtrunA17_Chr1g0211361 39.379 419 249 2 82 497 31 447 1.96e-110 335
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1214290 AT5G25510.1 62.253 506 185 3 1 506 1 500 0.0 671
Msa1214290 AT4G15415.1 54.747 495 214 4 1 485 1 495 0.0 552
Msa1214290 AT4G15415.4 54.747 495 214 4 1 485 1 495 0.0 552
Msa1214290 AT4G15415.2 54.747 495 214 4 1 485 1 495 0.0 552
Msa1214290 AT4G15415.5 54.747 495 214 4 1 485 1 495 0.0 552
Msa1214290 AT3G26020.2 54.297 512 194 5 1 481 1 503 0.0 544
Msa1214290 AT3G26020.5 54.297 512 194 5 1 481 1 503 0.0 544
Msa1214290 AT3G26020.1 54.297 512 194 5 1 481 1 503 0.0 544
Msa1214290 AT3G26020.6 54.297 512 194 5 1 481 1 503 0.0 544
Msa1214290 AT1G13460.2 60.870 414 159 1 77 487 75 488 0.0 543
Msa1214290 AT1G13460.1 60.870 414 159 1 77 487 75 488 0.0 543
Msa1214290 AT3G21650.1 53.269 520 204 5 1 485 1 516 0.0 542
Msa1214290 AT3G21650.2 53.269 520 204 5 1 485 1 516 0.0 542
Msa1214290 AT3G09880.1 52.716 497 227 3 1 494 1 492 0.0 525
Msa1214290 AT5G03470.1 51.434 488 225 4 1 482 1 482 0.0 521
Msa1214290 AT3G26030.1 50.710 493 218 9 1 486 1 475 7.33e-169 486
Msa1214290 AT3G26020.4 46.250 560 184 7 1 481 1 522 6.11e-159 462
Msa1214290 AT3G54930.2 51.699 412 194 1 78 484 82 493 1.95e-156 455
Msa1214290 AT3G54930.1 51.699 412 194 1 78 484 82 493 1.95e-156 455
Msa1214290 AT4G15415.3 56.030 398 165 4 1 388 1 398 2.75e-154 447
Msa1214290 AT3G26020.7 46.409 543 191 9 1 481 1 505 6.68e-152 444
Msa1214290 AT3G26020.8 46.409 543 191 9 1 481 1 505 6.68e-152 444
Msa1214290 AT3G26020.3 46.409 543 191 9 1 481 1 505 6.68e-152 444
Msa1214290 AT3G54930.3 52.063 315 146 1 79 388 83 397 1.40e-114 344

Find 155 sgRNAs with CRISPR-Local

Find 249 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTAAATTTCACTTGGCATTT+AGG 0.133417 8_1:-74813852 None:intergenic
CAATGACACTCTTGCATATT+AGG 0.187734 8_1:-74813758 None:intergenic
CTAACAGATTTCCTTATAAA+AGG 0.202511 8_1:-74811947 None:intergenic
GAATCTGATGAGTCGGATTT+TGG 0.220632 8_1:-74811257 None:intergenic
TAAATTTCACTTGGCATTTA+GGG 0.224065 8_1:-74813851 None:intergenic
CTTTCTTTCACTCTCTCAAC+TGG 0.243260 8_1:+74810454 Msa1214290:five_prime_UTR
ACAGTTCTGCATAGAATCTA+TGG 0.252421 8_1:+74811905 Msa1214290:CDS
GGCAATAGTACTACTAGTTT+TGG 0.252801 8_1:+74811296 Msa1214290:CDS
TAATGGAATTGCTGAGCTTT+TGG 0.252902 8_1:+74812009 Msa1214290:CDS
ATGATAAATACCAATAGATT+TGG 0.253333 8_1:-74812125 None:intergenic
GGTTCAACTTACTGATAAAA+AGG 0.257384 8_1:-74811481 None:intergenic
GAGTGAGTTGGAAGAGGTTT+TGG 0.272535 8_1:+74812270 Msa1214290:CDS
AGGAACAATTATTTGATTAA+AGG 0.274344 8_1:+74814007 Msa1214290:three_prime_UTR
GATGTAGTAAAGAGAGAAAA+AGG 0.279390 8_1:-74810339 None:intergenic
GTGTGCAACCAATTTGTTTA+GGG 0.286986 8_1:+74811652 Msa1214290:CDS
GGAACAATTATTTGATTAAA+GGG 0.287337 8_1:+74814008 Msa1214290:three_prime_UTR
TGTTCTGTACAGTTCTTATC+AGG 0.296622 8_1:-74811533 None:intergenic
AACATTTAATTTGCTTGAAA+TGG 0.301664 8_1:-74811351 None:intergenic
TCATGAACATTAGCTCCTTT+TGG 0.304127 8_1:-74812249 None:intergenic
TTATGTTCTGAGTCAGGTTC+AGG 0.305779 8_1:-74813126 None:intergenic
ATTGGTTAGCTCAGTGATAA+AGG 0.320886 8_1:+74812195 Msa1214290:CDS
ATTATTTGATTAAAGGGAAT+TGG 0.322857 8_1:+74814014 Msa1214290:three_prime_UTR
TGTGTGCAACCAATTTGTTT+AGG 0.324252 8_1:+74811651 Msa1214290:CDS
CGCTGGTGGCGGCTTCTTCA+AGG 0.337496 8_1:-74813264 None:intergenic
GATTCTGCAAAGAGTGATTC+TGG 0.347501 8_1:+74811275 Msa1214290:CDS
ACACCAGCATTCATGCTTGC+AGG 0.350797 8_1:-74811401 None:intergenic
TTGAAGATAGCACTGGCAAT+AGG 0.363955 8_1:+74813450 Msa1214290:three_prime_UTR
CGGAACGAGCTCATTTGTTA+TGG 0.366378 8_1:+74812996 Msa1214290:CDS
TTGCACAAACCCAAATCTAT+TGG 0.370970 8_1:+74812115 Msa1214290:CDS
CACTGTAACCTGTTTCCTAA+TGG 0.370976 8_1:-74813601 None:intergenic
TGGAGGATCCATTAGGAAAC+AGG 0.371223 8_1:+74813593 Msa1214290:three_prime_UTR
TCTTTCTTATGTTCTGAGTC+AGG 0.372770 8_1:-74813132 None:intergenic
AACTGAACAAAAGGTGAAAC+AGG 0.374985 8_1:-74813705 None:intergenic
GCAAATTAAATGTTGTGAAA+AGG 0.378108 8_1:+74811360 Msa1214290:CDS
GAAAGAAAGTGTGAAACTTT+AGG 0.379717 8_1:-74810440 None:intergenic
ACAAAGGCACCATAACCTTC+TGG 0.379726 8_1:-74812315 None:intergenic
GAAGAAGAAGAGGAGGGGTT+TGG 0.379805 8_1:-74810366 None:intergenic
TGGGAAAACCCTAAACAAAT+TGG 0.379876 8_1:-74811660 None:intergenic
TGATAAATACCAATAGATTT+GGG 0.382190 8_1:-74812124 None:intergenic
CCATGTTATTCTTCGCCTCT+CGG 0.386938 8_1:-74813236 None:intergenic
GGATGCAGGTGTTGTAGGTT+AGG 0.391793 8_1:+74811178 Msa1214290:intron
AACAGGTTACAGTGGTGGTG+GGG 0.397837 8_1:+74813610 Msa1214290:three_prime_UTR
ATGGCACTAACCTCAAACTT+TGG 0.403077 8_1:-74810218 None:intergenic
CTAGTAGAGTTGAGTAGAGT+AGG 0.403125 8_1:-74813905 None:intergenic
ATGGGAAATTCATGGTTCAT+AGG 0.411237 8_1:+74811924 Msa1214290:CDS
GTAGATCATAAACAACTTGC+AGG 0.412759 8_1:-74811754 None:intergenic
TAGGGTCTTCAGAGTCAAAA+AGG 0.414745 8_1:-74811862 None:intergenic
CAAATTAAATGTTGTGAAAA+GGG 0.416656 8_1:+74811361 Msa1214290:CDS
GGTGCCTTTGTTTCGACGGT+TGG 0.420407 8_1:+74812327 Msa1214290:CDS
GAAGAAGAGGAGGGGTTTGG+TGG 0.422007 8_1:-74810363 None:intergenic
ACAGGTTACAGTGGTGGTGG+GGG 0.422448 8_1:+74813611 Msa1214290:three_prime_UTR
CATAGATAAGGATCAAAGAT+TGG 0.423129 8_1:+74812177 Msa1214290:CDS
TTTGAAACCGAGCGGCATAA+TGG 0.423693 8_1:+74811992 Msa1214290:CDS
GGGGAGGGTTAAGATGAAGT+TGG 0.424265 8_1:+74810071 Msa1214290:five_prime_UTR
TAATATGCTATTACATTCAC+TGG 0.429069 8_1:+74813782 Msa1214290:three_prime_UTR
TTCAAACAATCTCTTTCTCT+AGG 0.433235 8_1:-74811881 None:intergenic
AAGAAAGATGCTATCTCAAA+TGG 0.436356 8_1:+74813147 Msa1214290:CDS
GGGAGGGTTAAGATGAAGTT+GGG 0.441936 8_1:+74810072 Msa1214290:five_prime_UTR
TAGACTCATGTAACTATGTA+AGG 0.443803 8_1:+74813925 Msa1214290:three_prime_UTR
CATTGTACAGTTCATAGATA+AGG 0.447391 8_1:+74812165 Msa1214290:CDS
TTACACAACGCAGCGATTGC+TGG 0.448320 8_1:-74811626 None:intergenic
CCTTACCAGCTCGCATTACC+AGG 0.449673 8_1:+74812357 Msa1214290:CDS
GAATTGGATGCAGGTGTTGT+AGG 0.453037 8_1:+74811173 Msa1214290:intron
CAACAAGGTCTAACAACGTT+TGG 0.456235 8_1:-74811568 None:intergenic
TTCAAGAGAATAAACGATGA+TGG 0.459395 8_1:-74810187 None:intergenic
AGCCTGTGTTTGATCCTGCT+TGG 0.461055 8_1:+74811726 Msa1214290:CDS
CAGGTTACAGTGGTGGTGGG+GGG 0.463589 8_1:+74813612 Msa1214290:three_prime_UTR
TTGAATGATTTGTAAGAGGT+TGG 0.469927 8_1:+74813388 Msa1214290:three_prime_UTR
AATCGAGAAACCAAAGTTTG+AGG 0.471363 8_1:+74810208 Msa1214290:five_prime_UTR
TATCATAAACTTTGCAGCAA+AGG 0.472991 8_1:-74811502 None:intergenic
GGCTGAATTCCAGAAGGTTA+TGG 0.473285 8_1:+74812306 Msa1214290:CDS
TTAAAATTTGAAGATAGCAC+TGG 0.475257 8_1:+74813443 Msa1214290:three_prime_UTR
ATTCAATTCATTGTCATACA+TGG 0.481640 8_1:+74810239 Msa1214290:five_prime_UTR
TAAAGGGACTATTGAAGTAT+TGG 0.483354 8_1:+74812212 Msa1214290:CDS
TGAAGATAGCACTGGCAATA+GGG 0.484431 8_1:+74813451 Msa1214290:three_prime_UTR
CCACTACTCGAACGAAACTT+AGG 0.485337 8_1:-74811683 None:intergenic
TTGGTTAGCTCAGTGATAAA+GGG 0.485661 8_1:+74812196 Msa1214290:CDS
AAGTTGGGTTCGGTGGTGAT+TGG 0.487261 8_1:+74810087 Msa1214290:five_prime_UTR
GTGCTCTTCTTTCAATGGCA+AGG 0.488424 8_1:-74812062 None:intergenic
CTTCCTCTTCGATCTTGCGT+TGG 0.492096 8_1:-74813192 None:intergenic
AGGTTACAGTGGTGGTGGGG+GGG 0.494447 8_1:+74813613 Msa1214290:three_prime_UTR
TAGCAGTAGCTGGTTTCACT+TGG 0.494863 8_1:-74813321 None:intergenic
ACCGAGCATGTAGCAGTAGC+TGG 0.494955 8_1:-74813331 None:intergenic
AAGTGTGAAACTTTAGGTGT+TGG 0.495147 8_1:-74810434 None:intergenic
TAGAATCTATGGGAAATTCA+TGG 0.495390 8_1:+74811916 Msa1214290:CDS
GTTGGTTCTAATTTACATAG+TGG 0.496428 8_1:+74813406 Msa1214290:three_prime_UTR
CACCGCCACCACCTACGGAT+TGG 0.496966 8_1:-74813288 None:intergenic
TACATAACTCACAGAATCAC+TGG 0.498799 8_1:+74813092 Msa1214290:CDS
GTCCAATCCGTAGGTGGTGG+CGG 0.500852 8_1:+74813286 Msa1214290:CDS
AAGAATTTGCTTTATCATTG+TGG 0.501957 8_1:-74811213 None:intergenic
TTGCTTAGGTGGTGCTGAGT+AGG 0.510457 8_1:+74813553 Msa1214290:three_prime_UTR
CGAGAGGCAGAATCACTTGT+CGG 0.511926 8_1:-74813054 None:intergenic
GAGAGAGGACTAGGAGGGGA+GGG 0.511982 8_1:+74810056 None:intergenic
GTATTTCAGTGTACAAATGT+TGG 0.518089 8_1:+74811323 Msa1214290:CDS
AATATCACCGCCACCACCTA+CGG 0.521434 8_1:-74813293 None:intergenic
GTTCATGAGTGAGTTGGAAG+AGG 0.521832 8_1:+74812264 Msa1214290:CDS
ATAGATTTGGGTTTGTGCAA+AGG 0.523747 8_1:-74812112 None:intergenic
TCAAACAATCTCTTTCTCTA+GGG 0.524186 8_1:-74811880 None:intergenic
TAAGATGAAGTTGGGTTCGG+TGG 0.529412 8_1:+74810080 Msa1214290:five_prime_UTR
GTTGTTGAATGATTTGTAAG+AGG 0.531556 8_1:+74813384 Msa1214290:three_prime_UTR
GAAACAGGTTACAGTGGTGG+TGG 0.531817 8_1:+74813608 Msa1214290:three_prime_UTR
TTATGGTGCCTTTGTTTCGA+CGG 0.533773 8_1:+74812323 Msa1214290:CDS
GGTTAAGATGAAGTTGGGTT+CGG 0.535390 8_1:+74810077 Msa1214290:five_prime_UTR
CTGTTAGCAATATCATCTAC+CGG 0.536734 8_1:+74811963 Msa1214290:CDS
AGCAATTCCATTATGCCGCT+CGG 0.539353 8_1:-74811999 None:intergenic
GCCAGTTACTAATAGCCAAA+AGG 0.540094 8_1:+74812234 Msa1214290:CDS
TACGGATTGGACGCTGGTGG+CGG 0.541776 8_1:-74813275 None:intergenic
AGCGTCCAATCCGTAGGTGG+TGG 0.542856 8_1:+74813283 Msa1214290:CDS
TTTCCTGCAAGCATGAATGC+TGG 0.544053 8_1:+74811398 Msa1214290:CDS
AAACAGGTTACAGTGGTGGT+GGG 0.544991 8_1:+74813609 Msa1214290:three_prime_UTR
AACAACCTGGTAATGCGAGC+TGG 0.545399 8_1:-74812362 None:intergenic
ACCAGCTACTGCTACATGCT+CGG 0.547168 8_1:+74813330 Msa1214290:CDS
CTTTGCAGAATCTGATGAGT+CGG 0.547663 8_1:-74811264 None:intergenic
TTTCTTTCACTCTCTCAACT+GGG 0.548420 8_1:+74810455 Msa1214290:five_prime_UTR
TGACACTCTTGCATATTAGG+AGG 0.551807 8_1:-74813755 None:intergenic
GCTAATGTTCATGAGTGAGT+TGG 0.552985 8_1:+74812258 Msa1214290:CDS
TCAAGAGAATAAACGATGAT+GGG 0.552999 8_1:-74810186 None:intergenic
CCGAGAGGCGAAGAATAACA+TGG 0.557609 8_1:+74813236 Msa1214290:CDS
GATTCATGATCACAATGGAA+TGG 0.558641 8_1:-74810264 None:intergenic
CAAGCCAACCGTCGAAACAA+AGG 0.561984 8_1:-74812331 None:intergenic
ACATACATGTAAATTTCACT+TGG 0.567541 8_1:-74813860 None:intergenic
CAGTTCTGCATAGAATCTAT+GGG 0.572378 8_1:+74811906 Msa1214290:CDS
ATGTATGACAATGAATTGAA+TGG 0.578536 8_1:-74810237 None:intergenic
AACATCTTTAAACGATAGAG+AGG 0.586528 8_1:-74811438 None:intergenic
AAGTTTCGTTCGAGTAGTGG+TGG 0.590711 8_1:+74811686 Msa1214290:CDS
ACATCTTTAAACGATAGAGA+GGG 0.592218 8_1:-74811437 None:intergenic
AATAGTAAAAGAATGAGTGA+AGG 0.595260 8_1:+74813987 Msa1214290:three_prime_UTR
CTACTCGAACGAAACTTAGG+TGG 0.596175 8_1:-74811680 None:intergenic
GACACTCTTGCATATTAGGA+GGG 0.600899 8_1:-74813754 None:intergenic
ACCACCTACGGATTGGACGC+TGG 0.601541 8_1:-74813281 None:intergenic
ATATTAGGAGGGAAAAGTGT+GGG 0.613841 8_1:-74813743 None:intergenic
ACTGGTTACTATATGCTATG+TGG 0.618468 8_1:+74813800 Msa1214290:three_prime_UTR
ACTTGCAGGTGAGACCAAGC+AGG 0.619708 8_1:-74811740 None:intergenic
TACTCGAACGAAACTTAGGT+GGG 0.627591 8_1:-74811679 None:intergenic
AGTAGGTAGTAAAATAGACA+AGG 0.629825 8_1:-74813888 None:intergenic
TACCAACCTGAAAATCCGGA+GGG 0.630973 8_1:-74813959 None:intergenic
AACAAAAGCATGATCTACGT+GGG 0.634366 8_1:-74811825 None:intergenic
AAACAAAAGCATGATCTACG+TGG 0.636662 8_1:-74811826 None:intergenic
TTACCAACCTGAAAATCCGG+AGG 0.645896 8_1:-74813960 None:intergenic
TTTATGATTCATGATCACAA+TGG 0.651552 8_1:-74810269 None:intergenic
AGGGAAAAGTGTGGGCCATG+AGG 0.654784 8_1:-74813735 None:intergenic
CATATTAGGAGGGAAAAGTG+TGG 0.657538 8_1:-74813744 None:intergenic
GCCACCAGCGTCCAATCCGT+AGG 0.658375 8_1:+74813277 Msa1214290:CDS
GATGCTATCTCAAATGGACG+AGG 0.659273 8_1:+74813153 Msa1214290:CDS
GTTGGAATAAGTTTAGAACA+AGG 0.661867 8_1:-74810416 None:intergenic
TAGGAAACAGGTTACAGTGG+TGG 0.662595 8_1:+74813605 Msa1214290:three_prime_UTR
TAGCATGGCTGAATTCCAGA+AGG 0.663321 8_1:+74812300 Msa1214290:CDS
CAGATGAAACAAAATCAACA+AGG 0.673447 8_1:-74811583 None:intergenic
ATGCCAACGCAAGATCGAAG+AGG 0.677288 8_1:+74813189 Msa1214290:CDS
CGAGAGGCGAAGAATAACAT+GGG 0.679780 8_1:+74813237 Msa1214290:CDS
CATTAGGAAACAGGTTACAG+TGG 0.682100 8_1:+74813602 Msa1214290:three_prime_UTR
CATCTTTAAACGATAGAGAG+GGG 0.686542 8_1:-74811436 None:intergenic
GACCAAGCAGGATCAAACAC+AGG 0.696221 8_1:-74811728 None:intergenic
ACAAGTGCTGAGAACACGAG+AGG 0.732134 8_1:-74813070 None:intergenic
AATCAAGTGATGTAGCCGAG+AGG 0.771534 8_1:+74813221 Msa1214290:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCTATAACAAAAGATAAAAT+AGG - chr8_1:74812653-74812672 None:intergenic 15.0%
!! TTGTGTAAAAGAAAAAGTAA+AGG - chr8_1:74810484-74810503 None:intergenic 20.0%
!! AGCTAAAAATTAATGACTAT+AGG - chr8_1:74810582-74810601 None:intergenic 20.0%
!!! TTAGCTTTAAATTTTATAGC+TGG + chr8_1:74810596-74810615 Msa1214290:intron 20.0%
!! TTTACATAAAGAGCAAAAAT+GGG - chr8_1:74810740-74810759 None:intergenic 20.0%
!! TGAAAATCATATGAAGAAAA+GGG - chr8_1:74810829-74810848 None:intergenic 20.0%
!! TTGAAAATCATATGAAGAAA+AGG - chr8_1:74810830-74810849 None:intergenic 20.0%
!!! AACATTTAATTTGCTTGAAA+TGG - chr8_1:74811354-74811373 None:intergenic 20.0%
!! CAAATTAAATGTTGTGAAAA+GGG + chr8_1:74811361-74811380 Msa1214290:CDS 20.0%
!! TGATAAATACCAATAGATTT+GGG - chr8_1:74812127-74812146 None:intergenic 20.0%
!! ATGATAAATACCAATAGATT+TGG - chr8_1:74812128-74812147 None:intergenic 20.0%
!!! AACAGCTTATAACTTTTTAT+TGG + chr8_1:74812615-74812634 Msa1214290:intron 20.0%
!! TTAAGTAACTATAAATTGCA+AGG - chr8_1:74812900-74812919 None:intergenic 20.0%
!! AGGAACAATTATTTGATTAA+AGG + chr8_1:74814007-74814026 Msa1214290:three_prime_UTR 20.0%
!! GGAACAATTATTTGATTAAA+GGG + chr8_1:74814008-74814027 Msa1214290:three_prime_UTR 20.0%
!! ATTATTTGATTAAAGGGAAT+TGG + chr8_1:74814014-74814033 Msa1214290:three_prime_UTR 20.0%
! ATGTATGACAATGAATTGAA+TGG - chr8_1:74810240-74810259 None:intergenic 25.0%
! ATTCAATTCATTGTCATACA+TGG + chr8_1:74810239-74810258 Msa1214290:five_prime_UTR 25.0%
! TTTATGATTCATGATCACAA+TGG - chr8_1:74810272-74810291 None:intergenic 25.0%
! ATGTAGTAAAGAGAGAAAAA+GGG - chr8_1:74810341-74810360 None:intergenic 25.0%
!! CTTTTTCTTTTACACAAATC+AGG + chr8_1:74810487-74810506 Msa1214290:five_prime_UTR 25.0%
!! TTTAAATTTTATAGCTGGTG+TGG + chr8_1:74810601-74810620 Msa1214290:intron 25.0%
! CTTTACATAAAGAGCAAAAA+TGG - chr8_1:74810741-74810760 None:intergenic 25.0%
! TTAACTGATGTTTGATGAAT+TGG + chr8_1:74811157-74811176 Msa1214290:intron 25.0%
!! AAGAATTTGCTTTATCATTG+TGG - chr8_1:74811216-74811235 None:intergenic 25.0%
! GCAAATTAAATGTTGTGAAA+AGG + chr8_1:74811360-74811379 Msa1214290:CDS 25.0%
! CTAACAGATTTCCTTATAAA+AGG - chr8_1:74811950-74811969 None:intergenic 25.0%
!!! AAGAGCACAAAATATTTTTG+TGG + chr8_1:74812077-74812096 Msa1214290:CDS 25.0%
! AACAACTTATGAAATGTCAT+AGG - chr8_1:74812555-74812574 None:intergenic 25.0%
! CATATGAAATGCTTAGATAT+TGG - chr8_1:74812865-74812884 None:intergenic 25.0%
!! TTATTTTCTTGTGATTGTTC+AGG + chr8_1:74812970-74812989 Msa1214290:intron 25.0%
! TTAAAATTTGAAGATAGCAC+TGG + chr8_1:74813443-74813462 Msa1214290:three_prime_UTR 25.0%
!! CAAAAACAACACAATTTTGA+AGG - chr8_1:74813536-74813555 None:intergenic 25.0%
!!! AAATTGTGTTGTTTTTGCTT+AGG + chr8_1:74813539-74813558 Msa1214290:three_prime_UTR 25.0%
! TAATATGCTATTACATTCAC+TGG + chr8_1:74813782-74813801 Msa1214290:three_prime_UTR 25.0%
! TAAATTTCACTTGGCATTTA+GGG - chr8_1:74813854-74813873 None:intergenic 25.0%
! ACATACATGTAAATTTCACT+TGG - chr8_1:74813863-74813882 None:intergenic 25.0%
! AATAGTAAAAGAATGAGTGA+AGG + chr8_1:74813987-74814006 Msa1214290:three_prime_UTR 25.0%
TCAAGAGAATAAACGATGAT+GGG - chr8_1:74810189-74810208 None:intergenic 30.0%
TTCAAGAGAATAAACGATGA+TGG - chr8_1:74810190-74810209 None:intergenic 30.0%
AAAGAGAGAAAAAGGGAAAA+TGG - chr8_1:74810334-74810353 None:intergenic 30.0%
GATGTAGTAAAGAGAGAAAA+AGG - chr8_1:74810342-74810361 None:intergenic 30.0%
! GTTGGAATAAGTTTAGAACA+AGG - chr8_1:74810419-74810438 None:intergenic 30.0%
! GAAAGAAAGTGTGAAACTTT+AGG - chr8_1:74810443-74810462 None:intergenic 30.0%
! TTCTTTTACACAAATCAGGT+TGG + chr8_1:74810491-74810510 Msa1214290:intron 30.0%
TGTTGAGATGAACTTGTATT+AGG + chr8_1:74810854-74810873 Msa1214290:intron 30.0%
TGATACACAATTGTTAGATC+TGG + chr8_1:74810967-74810986 Msa1214290:intron 30.0%
GTATTTCAGTGTACAAATGT+TGG + chr8_1:74811323-74811342 Msa1214290:CDS 30.0%
ACATCTTTAAACGATAGAGA+GGG - chr8_1:74811440-74811459 None:intergenic 30.0%
AACATCTTTAAACGATAGAG+AGG - chr8_1:74811441-74811460 None:intergenic 30.0%
GGTTCAACTTACTGATAAAA+AGG - chr8_1:74811484-74811503 None:intergenic 30.0%
TATCATAAACTTTGCAGCAA+AGG - chr8_1:74811505-74811524 None:intergenic 30.0%
CAGATGAAACAAAATCAACA+AGG - chr8_1:74811586-74811605 None:intergenic 30.0%
!!! CTTGTTGATTTTGTTTCATC+TGG + chr8_1:74811584-74811603 Msa1214290:CDS 30.0%
!! TGATTTTGTTTCATCTGGTT+TGG + chr8_1:74811589-74811608 Msa1214290:CDS 30.0%
TCAAACAATCTCTTTCTCTA+GGG - chr8_1:74811883-74811902 None:intergenic 30.0%
TTCAAACAATCTCTTTCTCT+AGG - chr8_1:74811884-74811903 None:intergenic 30.0%
TAGAATCTATGGGAAATTCA+TGG + chr8_1:74811916-74811935 Msa1214290:CDS 30.0%
!!! ATTTTTGGGAGTGTTATTAG+TGG + chr8_1:74812034-74812053 Msa1214290:CDS 30.0%
! ATTTTGTGCTCTTCTTTCAA+TGG - chr8_1:74812070-74812089 None:intergenic 30.0%
!! GCACAAAATATTTTTGTGGA+AGG + chr8_1:74812081-74812100 Msa1214290:CDS 30.0%
CATTGTACAGTTCATAGATA+AGG + chr8_1:74812165-74812184 Msa1214290:CDS 30.0%
CATAGATAAGGATCAAAGAT+TGG + chr8_1:74812177-74812196 Msa1214290:CDS 30.0%
TAAAGGGACTATTGAAGTAT+TGG + chr8_1:74812212-74812231 Msa1214290:CDS 30.0%
CAAACAGATACTAATGTACA+AGG - chr8_1:74812461-74812480 None:intergenic 30.0%
CTTGTACATTAGTATCTGTT+TGG + chr8_1:74812459-74812478 Msa1214290:intron 30.0%
TAAGAACTTATGAGACTGTT+TGG + chr8_1:74812511-74812530 Msa1214290:intron 30.0%
AAGAACTTATGAGACTGTTT+GGG + chr8_1:74812512-74812531 Msa1214290:intron 30.0%
AACAAACTGTTTATCCAAAC+TGG + chr8_1:74812729-74812748 Msa1214290:intron 30.0%
TTTGTAATCCAATATCCTCA+TGG - chr8_1:74812759-74812778 None:intergenic 30.0%
TGAGGATATTGGATTACAAA+TGG + chr8_1:74812759-74812778 Msa1214290:intron 30.0%
AAGAAAGATGCTATCTCAAA+TGG + chr8_1:74813147-74813166 Msa1214290:CDS 30.0%
! GTTGTTGAATGATTTGTAAG+AGG + chr8_1:74813384-74813403 Msa1214290:three_prime_UTR 30.0%
! TTGAATGATTTGTAAGAGGT+TGG + chr8_1:74813388-74813407 Msa1214290:three_prime_UTR 30.0%
!! GTTGGTTCTAATTTACATAG+TGG + chr8_1:74813406-74813425 Msa1214290:three_prime_UTR 30.0%
!!! AGGTGATGTTTTGTTTTGTT+TGG + chr8_1:74813573-74813592 Msa1214290:three_prime_UTR 30.0%
!!! TGATGTTTTGTTTTGTTTGG+AGG + chr8_1:74813576-74813595 Msa1214290:three_prime_UTR 30.0%
GGTAACAAAAACTGAACAAA+AGG - chr8_1:74813717-74813736 None:intergenic 30.0%
GTAAATTTCACTTGGCATTT+AGG - chr8_1:74813855-74813874 None:intergenic 30.0%
AGTAGGTAGTAAAATAGACA+AGG - chr8_1:74813891-74813910 None:intergenic 30.0%
TAGACTCATGTAACTATGTA+AGG + chr8_1:74813925-74813944 Msa1214290:three_prime_UTR 30.0%
AATCGAGAAACCAAAGTTTG+AGG + chr8_1:74810208-74810227 Msa1214290:five_prime_UTR 35.0%
GATTCATGATCACAATGGAA+TGG - chr8_1:74810267-74810286 None:intergenic 35.0%
AGAAGAAGAAGAAGAAGAAG+AGG - chr8_1:74810379-74810398 None:intergenic 35.0%
AAGTGTGAAACTTTAGGTGT+TGG - chr8_1:74810437-74810456 None:intergenic 35.0%
TTTCTTTCACTCTCTCAACT+GGG + chr8_1:74810455-74810474 Msa1214290:five_prime_UTR 35.0%
GTGAGCTACATCATCTTTAA+TGG + chr8_1:74810634-74810653 Msa1214290:intron 35.0%
ATCTTTAATGGCTCTTCAAG+TGG + chr8_1:74810646-74810665 Msa1214290:intron 35.0%
CATAAAGAGCAAAAATGGGT+GGG - chr8_1:74810736-74810755 None:intergenic 35.0%
ACATAAAGAGCAAAAATGGG+TGG - chr8_1:74810737-74810756 None:intergenic 35.0%
!! GTATCTTCACTTGTTGTTTG+TGG + chr8_1:74810883-74810902 Msa1214290:intron 35.0%
AGGACATGGTAAAGAAATTG+AGG - chr8_1:74811059-74811078 None:intergenic 35.0%
AAAACACTACTCTTTGCACA+AGG - chr8_1:74811079-74811098 None:intergenic 35.0%
CAGCTTGAGCTTCTAAATAT+TGG + chr8_1:74811121-74811140 Msa1214290:intron 35.0%
ATGTTTGATGAATTGGATGC+AGG + chr8_1:74811164-74811183 Msa1214290:intron 35.0%
!! TCGGATTTTGGTAACTTCTT+AGG - chr8_1:74811248-74811267 None:intergenic 35.0%
!! GGCAATAGTACTACTAGTTT+TGG + chr8_1:74811296-74811315 Msa1214290:CDS 35.0%
CATCTTTAAACGATAGAGAG+GGG - chr8_1:74811439-74811458 None:intergenic 35.0%
TGTTCTGTACAGTTCTTATC+AGG - chr8_1:74811536-74811555 None:intergenic 35.0%
! TGTGTGCAACCAATTTGTTT+AGG + chr8_1:74811651-74811670 Msa1214290:CDS 35.0%
! GTGTGCAACCAATTTGTTTA+GGG + chr8_1:74811652-74811671 Msa1214290:CDS 35.0%
TGGGAAAACCCTAAACAAAT+TGG - chr8_1:74811663-74811682 None:intergenic 35.0%
GTAGATCATAAACAACTTGC+AGG - chr8_1:74811757-74811776 None:intergenic 35.0%
! AACAAAAGCATGATCTACGT+GGG - chr8_1:74811828-74811847 None:intergenic 35.0%
! AAACAAAAGCATGATCTACG+TGG - chr8_1:74811829-74811848 None:intergenic 35.0%
ACAGTTCTGCATAGAATCTA+TGG + chr8_1:74811905-74811924 Msa1214290:CDS 35.0%
CAGTTCTGCATAGAATCTAT+GGG + chr8_1:74811906-74811925 Msa1214290:CDS 35.0%
ATGGGAAATTCATGGTTCAT+AGG + chr8_1:74811924-74811943 Msa1214290:CDS 35.0%
! TGGTTCATAGGCCTTTTATA+AGG + chr8_1:74811936-74811955 Msa1214290:CDS 35.0%
CTGTTAGCAATATCATCTAC+CGG + chr8_1:74811963-74811982 Msa1214290:CDS 35.0%
! TAATGGAATTGCTGAGCTTT+TGG + chr8_1:74812009-74812028 Msa1214290:CDS 35.0%
!! CTGAGCTTTTGGAGATTTTT+GGG + chr8_1:74812020-74812039 Msa1214290:CDS 35.0%
! ATAGATTTGGGTTTGTGCAA+AGG - chr8_1:74812115-74812134 None:intergenic 35.0%
TTGCACAAACCCAAATCTAT+TGG + chr8_1:74812115-74812134 Msa1214290:CDS 35.0%
! ATTGGTTAGCTCAGTGATAA+AGG + chr8_1:74812195-74812214 Msa1214290:CDS 35.0%
! TTGGTTAGCTCAGTGATAAA+GGG + chr8_1:74812196-74812215 Msa1214290:CDS 35.0%
!! TCCTTTTGGCTATTAGTAAC+TGG - chr8_1:74812238-74812257 None:intergenic 35.0%
! TCATGAACATTAGCTCCTTT+TGG - chr8_1:74812252-74812271 None:intergenic 35.0%
TTAAAAGAGCAACTAGAACG+AGG - chr8_1:74812402-74812421 None:intergenic 35.0%
ACAGATACTAATGTACAAGG+AGG - chr8_1:74812458-74812477 None:intergenic 35.0%
!! GCTGTTTTCATAAGTTATCC+TGG - chr8_1:74812601-74812620 None:intergenic 35.0%
! TTTTCTTGTGATTGTTCAGG+TGG + chr8_1:74812973-74812992 Msa1214290:intron 35.0%
! GGTTTTGCGTTATAAGATTC+AGG - chr8_1:74813036-74813055 None:intergenic 35.0%
TACATAACTCACAGAATCAC+TGG + chr8_1:74813092-74813111 Msa1214290:CDS 35.0%
! TCTTTCTTATGTTCTGAGTC+AGG - chr8_1:74813135-74813154 None:intergenic 35.0%
!!! TTGTGTTGTTTTTGCTTAGG+TGG + chr8_1:74813542-74813561 Msa1214290:three_prime_UTR 35.0%
!! TTTTGTTTGGAGGATCCATT+AGG + chr8_1:74813586-74813605 Msa1214290:three_prime_UTR 35.0%
AACTGAACAAAAGGTGAAAC+AGG - chr8_1:74813708-74813727 None:intergenic 35.0%
! GTTCAGTTTTTGTTACCTCA+TGG + chr8_1:74813720-74813739 Msa1214290:three_prime_UTR 35.0%
! ATATTAGGAGGGAAAAGTGT+GGG - chr8_1:74813746-74813765 None:intergenic 35.0%
CAATGACACTCTTGCATATT+AGG - chr8_1:74813761-74813780 None:intergenic 35.0%
ACTGGTTACTATATGCTATG+TGG + chr8_1:74813800-74813819 Msa1214290:three_prime_UTR 35.0%
! CTTTTACCAACCTGAAAATC+CGG - chr8_1:74813966-74813985 None:intergenic 35.0%
GGTTAAGATGAAGTTGGGTT+CGG + chr8_1:74810077-74810096 Msa1214290:five_prime_UTR 40.0%
ATGGCACTAACCTCAAACTT+TGG - chr8_1:74810221-74810240 None:intergenic 40.0%
AAGAAGAAGAAGAAGAGGAG+GGG - chr8_1:74810374-74810393 None:intergenic 40.0%
GAAGAAGAAGAAGAAGAGGA+GGG - chr8_1:74810375-74810394 None:intergenic 40.0%
AGAAGAAGAAGAAGAAGAGG+AGG - chr8_1:74810376-74810395 None:intergenic 40.0%
CTTTCTTTCACTCTCTCAAC+TGG + chr8_1:74810454-74810473 Msa1214290:five_prime_UTR 40.0%
AGAGAAAGTGAGTGATGAGA+AGG - chr8_1:74810535-74810554 None:intergenic 40.0%
! ATTTTATAGCTGGTGTGGTG+AGG + chr8_1:74810606-74810625 Msa1214290:intron 40.0%
CTCAACTTTGTCATGTCACT+TGG + chr8_1:74810937-74810956 Msa1214290:intron 40.0%
! GAATCTGATGAGTCGGATTT+TGG - chr8_1:74811260-74811279 None:intergenic 40.0%
CTTTGCAGAATCTGATGAGT+CGG - chr8_1:74811267-74811286 None:intergenic 40.0%
GATTCTGCAAAGAGTGATTC+TGG + chr8_1:74811275-74811294 Msa1214290:CDS 40.0%
CAACAAGGTCTAACAACGTT+TGG - chr8_1:74811571-74811590 None:intergenic 40.0%
TACTCGAACGAAACTTAGGT+GGG - chr8_1:74811682-74811701 None:intergenic 40.0%
TAGGGTCTTCAGAGTCAAAA+AGG - chr8_1:74811865-74811884 None:intergenic 40.0%
GCTCGGTTTCAAAAACAAAC+CGG - chr8_1:74811985-74812004 None:intergenic 40.0%
!!! GGTTTGTTTTTGAAACCGAG+CGG + chr8_1:74811984-74812003 Msa1214290:CDS 40.0%
!! GCTGAGCTTTTGGAGATTTT+TGG + chr8_1:74812019-74812038 Msa1214290:CDS 40.0%
GCCAGTTACTAATAGCCAAA+AGG + chr8_1:74812234-74812253 Msa1214290:CDS 40.0%
GCTAATGTTCATGAGTGAGT+TGG + chr8_1:74812258-74812277 Msa1214290:CDS 40.0%
! TTATGGTGCCTTTGTTTCGA+CGG + chr8_1:74812323-74812342 Msa1214290:CDS 40.0%
TTGGCTAAGAGAAAACAACC+TGG - chr8_1:74812378-74812397 None:intergenic 40.0%
CTAATTTCACTAAGCTCTCC+AGG + chr8_1:74812580-74812599 Msa1214290:intron 40.0%
AGTCTACAAGCTCAAGTTTG+AGG - chr8_1:74812819-74812838 None:intergenic 40.0%
! TTATGTTCTGAGTCAGGTTC+AGG - chr8_1:74813129-74813148 None:intergenic 40.0%
!! TTGAAGATAGCACTGGCAAT+AGG + chr8_1:74813450-74813469 Msa1214290:three_prime_UTR 40.0%
!! TGAAGATAGCACTGGCAATA+GGG + chr8_1:74813451-74813470 Msa1214290:three_prime_UTR 40.0%
CACTGTAACCTGTTTCCTAA+TGG - chr8_1:74813604-74813623 None:intergenic 40.0%
CATTAGGAAACAGGTTACAG+TGG + chr8_1:74813602-74813621 Msa1214290:three_prime_UTR 40.0%
CATATTAGGAGGGAAAAGTG+TGG - chr8_1:74813747-74813766 None:intergenic 40.0%
GACACTCTTGCATATTAGGA+GGG - chr8_1:74813757-74813776 None:intergenic 40.0%
TGACACTCTTGCATATTAGG+AGG - chr8_1:74813758-74813777 None:intergenic 40.0%
CTAGTAGAGTTGAGTAGAGT+AGG - chr8_1:74813908-74813927 None:intergenic 40.0%
!!! AAGGCTTTAGATTTTCCCTC+CGG + chr8_1:74813944-74813963 Msa1214290:three_prime_UTR 40.0%
GGGAGGGTTAAGATGAAGTT+GGG + chr8_1:74810072-74810091 Msa1214290:five_prime_UTR 45.0%
TAAGATGAAGTTGGGTTCGG+TGG + chr8_1:74810080-74810099 Msa1214290:five_prime_UTR 45.0%
AATGGCTCTTCAAGTGGTTG+TGG + chr8_1:74810652-74810671 Msa1214290:intron 45.0%
TCTTCAAGTGGTTGTGGTTG+TGG + chr8_1:74810658-74810677 Msa1214290:intron 45.0%
GGTGGGAAAAACTGAGATCT+GGG - chr8_1:74810719-74810738 None:intergenic 45.0%
CTACTCTTTGCACAAGGACA+TGG - chr8_1:74811073-74811092 None:intergenic 45.0%
! GAATTGGATGCAGGTGTTGT+AGG + chr8_1:74811173-74811192 Msa1214290:intron 45.0%
TTTCCTGCAAGCATGAATGC+TGG + chr8_1:74811398-74811417 Msa1214290:CDS 45.0%
CTACTCGAACGAAACTTAGG+TGG - chr8_1:74811683-74811702 None:intergenic 45.0%
CCACTACTCGAACGAAACTT+AGG - chr8_1:74811686-74811705 None:intergenic 45.0%
CCTAAGTTTCGTTCGAGTAG+TGG + chr8_1:74811683-74811702 Msa1214290:CDS 45.0%
AAGTTTCGTTCGAGTAGTGG+TGG + chr8_1:74811686-74811705 Msa1214290:CDS 45.0%
! TTTGAAACCGAGCGGCATAA+TGG + chr8_1:74811992-74812011 Msa1214290:CDS 45.0%
AGCAATTCCATTATGCCGCT+CGG - chr8_1:74812002-74812021 None:intergenic 45.0%
GTGCTCTTCTTTCAATGGCA+AGG - chr8_1:74812065-74812084 None:intergenic 45.0%
! GTTCATGAGTGAGTTGGAAG+AGG + chr8_1:74812264-74812283 Msa1214290:CDS 45.0%
!! GAGTGAGTTGGAAGAGGTTT+TGG + chr8_1:74812270-74812289 Msa1214290:CDS 45.0%
!!! GGTTTTGGAGATGACTAGCA+TGG + chr8_1:74812285-74812304 Msa1214290:CDS 45.0%
TAGCATGGCTGAATTCCAGA+AGG + chr8_1:74812300-74812319 Msa1214290:CDS 45.0%
GGCTGAATTCCAGAAGGTTA+TGG + chr8_1:74812306-74812325 Msa1214290:CDS 45.0%
!! ACAAAGGCACCATAACCTTC+TGG - chr8_1:74812318-74812337 None:intergenic 45.0%
AGAGCAACTAGAACGAGGAT+TGG - chr8_1:74812397-74812416 None:intergenic 45.0%
ATCCAAACTGGACATCCATG+AGG + chr8_1:74812741-74812760 Msa1214290:intron 45.0%
ATCCTCATGGATGTCCAGTT+TGG - chr8_1:74812746-74812765 None:intergenic 45.0%
CTGGACATCCATGAGGATAT+TGG + chr8_1:74812748-74812767 Msa1214290:intron 45.0%
TCTTGTGATTGTTCAGGTGG+CGG + chr8_1:74812976-74812995 Msa1214290:intron 45.0%
! CGGAACGAGCTCATTTGTTA+TGG + chr8_1:74812996-74813015 Msa1214290:CDS 45.0%
GATGCTATCTCAAATGGACG+AGG + chr8_1:74813153-74813172 Msa1214290:CDS 45.0%
AATCAAGTGATGTAGCCGAG+AGG + chr8_1:74813221-74813240 Msa1214290:CDS 45.0%
CCATGTTATTCTTCGCCTCT+CGG - chr8_1:74813239-74813258 None:intergenic 45.0%
CGAGAGGCGAAGAATAACAT+GGG + chr8_1:74813237-74813256 Msa1214290:CDS 45.0%
! TAGCAGTAGCTGGTTTCACT+TGG - chr8_1:74813324-74813343 None:intergenic 45.0%
TGGAGGATCCATTAGGAAAC+AGG + chr8_1:74813593-74813612 Msa1214290:three_prime_UTR 45.0%
TAGGAAACAGGTTACAGTGG+TGG + chr8_1:74813605-74813624 Msa1214290:three_prime_UTR 45.0%
AAACAGGTTACAGTGGTGGT+GGG + chr8_1:74813609-74813628 Msa1214290:three_prime_UTR 45.0%
! GATTTTCCCTCCGGATTTTC+AGG + chr8_1:74813953-74813972 Msa1214290:three_prime_UTR 45.0%
TACCAACCTGAAAATCCGGA+GGG - chr8_1:74813962-74813981 None:intergenic 45.0%
TTACCAACCTGAAAATCCGG+AGG - chr8_1:74813963-74813982 None:intergenic 45.0%
GGGGAGGGTTAAGATGAAGT+TGG + chr8_1:74810071-74810090 Msa1214290:five_prime_UTR 50.0%
!! AAGTTGGGTTCGGTGGTGAT+TGG + chr8_1:74810087-74810106 Msa1214290:five_prime_UTR 50.0%
GAAGAAGAAGAGGAGGGGTT+TGG - chr8_1:74810369-74810388 None:intergenic 50.0%
GGGAAAAACTGAGATCTGGG+TGG - chr8_1:74810716-74810735 None:intergenic 50.0%
GGGTGGGAAAAACTGAGATC+TGG - chr8_1:74810720-74810739 None:intergenic 50.0%
! GGATGCAGGTGTTGTAGGTT+AGG + chr8_1:74811178-74811197 Msa1214290:intron 50.0%
ACACCAGCATTCATGCTTGC+AGG - chr8_1:74811404-74811423 None:intergenic 50.0%
TTACACAACGCAGCGATTGC+TGG - chr8_1:74811629-74811648 None:intergenic 50.0%
AGCCTGTGTTTGATCCTGCT+TGG + chr8_1:74811726-74811745 Msa1214290:CDS 50.0%
GACCAAGCAGGATCAAACAC+AGG - chr8_1:74811731-74811750 None:intergenic 50.0%
CAAGCCAACCGTCGAAACAA+AGG - chr8_1:74812334-74812353 None:intergenic 50.0%
! AACAACCTGGTAATGCGAGC+TGG - chr8_1:74812365-74812384 None:intergenic 50.0%
CGAGAGGCAGAATCACTTGT+CGG - chr8_1:74813057-74813076 None:intergenic 50.0%
!! ACAAGTGCTGAGAACACGAG+AGG - chr8_1:74813073-74813092 None:intergenic 50.0%
ATGCCAACGCAAGATCGAAG+AGG + chr8_1:74813189-74813208 Msa1214290:CDS 50.0%
CTTCCTCTTCGATCTTGCGT+TGG - chr8_1:74813195-74813214 None:intergenic 50.0%
CCGAGAGGCGAAGAATAACA+TGG + chr8_1:74813236-74813255 Msa1214290:CDS 50.0%
AATATCACCGCCACCACCTA+CGG - chr8_1:74813296-74813315 None:intergenic 50.0%
ACCAGCTACTGCTACATGCT+CGG + chr8_1:74813330-74813349 Msa1214290:CDS 50.0%
! TTGCTTAGGTGGTGCTGAGT+AGG + chr8_1:74813553-74813572 Msa1214290:three_prime_UTR 50.0%
GAAACAGGTTACAGTGGTGG+TGG + chr8_1:74813608-74813627 Msa1214290:three_prime_UTR 50.0%
! AACAGGTTACAGTGGTGGTG+GGG + chr8_1:74813610-74813629 Msa1214290:three_prime_UTR 50.0%
!!! TGGGGGGGTGTTTTATGTGT+CGG + chr8_1:74813628-74813647 Msa1214290:three_prime_UTR 50.0%
!!! TTCCCTCCGGATTTTCAGGT+TGG + chr8_1:74813957-74813976 Msa1214290:three_prime_UTR 50.0%
GAAGAAGAGGAGGGGTTTGG+TGG - chr8_1:74810366-74810385 None:intergenic 55.0%
ACTTGCAGGTGAGACCAAGC+AGG - chr8_1:74811743-74811762 None:intergenic 55.0%
! GGTGCCTTTGTTTCGACGGT+TGG + chr8_1:74812327-74812346 Msa1214290:CDS 55.0%
! CCTGGTAATGCGAGCTGGTA+AGG - chr8_1:74812360-74812379 None:intergenic 55.0%
CCTTACCAGCTCGCATTACC+AGG + chr8_1:74812357-74812376 Msa1214290:CDS 55.0%
ACCGAGCATGTAGCAGTAGC+TGG - chr8_1:74813334-74813353 None:intergenic 55.0%
!! ACAGGTTACAGTGGTGGTGG+GGG + chr8_1:74813611-74813630 Msa1214290:three_prime_UTR 55.0%
!!! GGGGGTGTTTTATGTGTCGG+TGG + chr8_1:74813631-74813650 Msa1214290:three_prime_UTR 55.0%
! AGGGAAAAGTGTGGGCCATG+AGG - chr8_1:74813738-74813757 None:intergenic 55.0%
!! TACGGATTGGACGCTGGTGG+CGG - chr8_1:74813278-74813297 None:intergenic 60.0%
!! ACCTACGGATTGGACGCTGG+TGG - chr8_1:74813281-74813300 None:intergenic 60.0%
ACCAGCGTCCAATCCGTAGG+TGG + chr8_1:74813280-74813299 Msa1214290:CDS 60.0%
!! ACCACCTACGGATTGGACGC+TGG - chr8_1:74813284-74813303 None:intergenic 60.0%
AGCGTCCAATCCGTAGGTGG+TGG + chr8_1:74813283-74813302 Msa1214290:CDS 60.0%
! GTCCAATCCGTAGGTGGTGG+CGG + chr8_1:74813286-74813305 Msa1214290:CDS 60.0%
!! CAGGTTACAGTGGTGGTGGG+GGG + chr8_1:74813612-74813631 Msa1214290:three_prime_UTR 60.0%
!! AGGTTACAGTGGTGGTGGGG+GGG + chr8_1:74813613-74813632 Msa1214290:three_prime_UTR 60.0%
!! CGCTGGTGGCGGCTTCTTCA+AGG - chr8_1:74813267-74813286 None:intergenic 65.0%
GCCACCAGCGTCCAATCCGT+AGG + chr8_1:74813277-74813296 Msa1214290:CDS 65.0%
CACCGCCACCACCTACGGAT+TGG - chr8_1:74813291-74813310 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 74810071 74814047 74810071 ID=Msa1214290;Name=Msa1214290
chr8_1 mRNA 74810071 74814047 74810071 ID=Msa1214290-mRNA-1;Parent=Msa1214290;Name=Msa1214290-mRNA-1;_AED=0.01;_eAED=0.01;_QI=470|1|1|1|0.5|0.33|3|684|510
chr8_1 exon 74810071 74810508 74810071 ID=Msa1214290-mRNA-1:exon:25666;Parent=Msa1214290-mRNA-1
chr8_1 exon 74811186 74812378 74811186 ID=Msa1214290-mRNA-1:exon:25667;Parent=Msa1214290-mRNA-1
chr8_1 exon 74812992 74814047 74812992 ID=Msa1214290-mRNA-1:exon:25668;Parent=Msa1214290-mRNA-1
chr8_1 five_prime_UTR 74810071 74810508 74810071 ID=Msa1214290-mRNA-1:five_prime_utr;Parent=Msa1214290-mRNA-1
chr8_1 five_prime_UTR 74811186 74811217 74811186 ID=Msa1214290-mRNA-1:five_prime_utr;Parent=Msa1214290-mRNA-1
chr8_1 CDS 74811218 74812378 74811218 ID=Msa1214290-mRNA-1:cds;Parent=Msa1214290-mRNA-1
chr8_1 CDS 74812992 74813363 74812992 ID=Msa1214290-mRNA-1:cds;Parent=Msa1214290-mRNA-1
chr8_1 three_prime_UTR 74813364 74814047 74813364 ID=Msa1214290-mRNA-1:three_prime_utr;Parent=Msa1214290-mRNA-1
Gene Sequence

>Msa1214290

ATGATAAAGCAAATTCTTAGCAAATTGCCTAAGAAGTTACCAAAATCCGACTCATCAGATTCTGCAAAGAGTGATTCTGGCAATAGTACTACTAGTTTTGGAAATGTATTTCAGTGTACAAATGTTGGAAGTACCATTTCAAGCAAATTAAATGTTGTGAAAAGGGTATCTTCTGTTGTTTTTCCTGCAAGCATGAATGCTGGTGTAGAAGCAGTTGACCCCTCTCTATCGTTTAAAGATGTTTCAAATACACAGAAACAAAGCCTTTTTATCAGTAAGTTGAACCTTTGCTGCAAAGTTTATGATATGAGTGATCCTGATAAGAACTGTACAGAACAAGATGTTAAACGCCAAACGTTGTTAGACCTTGTTGATTTTGTTTCATCTGGTTTGGTAAAATTTACAGAACCAGCAATCGCTGCGTTGTGTAAAATGTGTGCAACCAATTTGTTTAGGGTTTTCCCACCTAAGTTTCGTTCGAGTAGTGGTGGAGAAACAGAAGATGAAGAGCCTGTGTTTGATCCTGCTTGGTCTCACCTGCAAGTTGTTTATGATCTACTGCTTCAATTCATCAATTACAACTCTCTTGATGTGAAGCTTGCAAAATCCCACGTAGATCATGCTTTTGTTTTAAGATTACTTGACCTTTTTGACTCTGAAGACCCTAGAGAAAGAGATTGTTTGAAAACAGTTCTGCATAGAATCTATGGGAAATTCATGGTTCATAGGCCTTTTATAAGGAAATCTGTTAGCAATATCATCTACCGGTTTGTTTTTGAAACCGAGCGGCATAATGGAATTGCTGAGCTTTTGGAGATTTTTGGGAGTGTTATTAGTGGATTTGCCTTGCCATTGAAAGAAGAGCACAAAATATTTTTGTGGAAGGCTTTAATTCCTTTGCACAAACCCAAATCTATTGGTATTTATCATCAGCAGTTAACATATTGCATTGTACAGTTCATAGATAAGGATCAAAGATTGGTTAGCTCAGTGATAAAGGGACTATTGAAGTATTGGCCAGTTACTAATAGCCAAAAGGAGCTAATGTTCATGAGTGAGTTGGAAGAGGTTTTGGAGATGACTAGCATGGCTGAATTCCAGAAGGTTATGGTGCCTTTGTTTCGACGGTTGGCTTGCTGCCTTACCAGCTCGCATTACCAGGTGGCGGAACGAGCTCATTTGTTATGGAACAATGAGCACATCCTGAATCTTATAACGCAAAACCGACAAGTGATTCTGCCTCTCGTGTTCTCAGCACTTGTACATAACTCACAGAATCACTGGAATCAAGCAGTCCTGAACCTGACTCAGAACATAAGAAAGATGCTATCTCAAATGGACGAGGAACTCGTACTTGCATGCCAACGCAAGATCGAAGAGGAAGATTCAAAATCAAGTGATGTAGCCGAGAGGCGAAGAATAACATGGGAACGCCTTGAAGAAGCCGCCACCAGCGTCCAATCCGTAGGTGGTGGCGGTGATATTTTAGTCCAAGTGAAACCAGCTACTGCTACATGCTCGGTAGCATGCTAA
Protein sequence

>Msa1214290

MIKQILSKLPKKLPKSDSSDSAKSDSGNSTTSFGNVFQCTNVGSTISSKLNVVKRVSSVVFPASMNAGVEAVDPSLSFKDVSNTQKQSLFISKLNLCCKVYDMSDPDKNCTEQDVKRQTLLDLVDFVSSGLVKFTEPAIAALCKMCATNLFRVFPPKFRSSSGGETEDEEPVFDPAWSHLQVVYDLLLQFINYNSLDVKLAKSHVDHAFVLRLLDLFDSEDPRERDCLKTVLHRIYGKFMVHRPFIRKSVSNIIYRFVFETERHNGIAELLEIFGSVISGFALPLKEEHKIFLWKALIPLHKPKSIGIYHQQLTYCIVQFIDKDQRLVSSVIKGLLKYWPVTNSQKELMFMSELEEVLEMTSMAEFQKVMVPLFRRLACCLTSSHYQVAERAHLLWNNEHILNLITQNRQVILPLVFSALVHNSQNHWNQAVLNLTQNIRKMLSQMDEELVLACQRKIEEEDSKSSDVAERRRITWERLEEAATSVQSVGGGGDILVQVKPATATCSVAC*