Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1214560 | XP_024636561.2 | 77.570 | 214 | 12 | 1 | 1 | 178 | 27 | 240 | 1.05e-102 | 305 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0382700 | Msa1214560 | 0.820660 | 6.098558e-53 | -8.615850e-47 |
| Msa1214560 | Msa1214580 | 0.894916 | 1.571111e-75 | -8.615850e-47 |
| Msa1214560 | Msa1262290 | 0.988931 | 5.371786e-176 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1214560 | MtrunA17_Chr4g0063641 | 77.570 | 214 | 12 | 1 | 1 | 178 | 27 | 240 | 9.61e-107 | 305 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 198 sgRNAs with CRISPR-Local
Find 417 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTACTCAACCTTTGTAAAT+TGG | 0.140120 | 8_1:-75289157 | Msa1214560:CDS |
| TACACAGGTTTCAATTTAAT+TGG | 0.158448 | 8_1:-75288079 | Msa1214560:three_prime_UTR |
| AGAAGGATTGATCGTAATTT+TGG | 0.167729 | 8_1:+75287734 | None:intergenic |
| CTCTTCTCTCTTTCCGATTT+CGG | 0.184156 | 8_1:+75285512 | Msa1214570:CDS |
| TGATTGAATTTGAAGGTTTA+AGG | 0.202005 | 8_1:-75285215 | Msa1214560:three_prime_UTR |
| GAGTTTCGCTGCGGCGGTTA+TGG | 0.209451 | 8_1:+75285697 | Msa1214570:CDS |
| TGATCCGAATAAATCATAAA+TGG | 0.228084 | 8_1:+75288200 | None:intergenic |
| CCTTTGTAAATTGGGAATTC+TGG | 0.228443 | 8_1:-75289148 | Msa1214560:CDS |
| CTAAGTCTTTAGGATTCTTT+TGG | 0.236913 | 8_1:+75288837 | None:intergenic |
| AGTTTCGCTGCGGCGGTTAT+GGG | 0.237903 | 8_1:+75285698 | Msa1214570:CDS |
| AATTTGCTTACAAAGATAAT+AGG | 0.239088 | 8_1:+75289053 | None:intergenic |
| TTCTTTAGCACTGCTATTAC+TGG | 0.243352 | 8_1:-75287641 | Msa1214560:three_prime_UTR |
| GCAGTGAAGTTTCTGAAGTT+TGG | 0.243656 | 8_1:-75288425 | Msa1214560:three_prime_UTR |
| GGTTATGGGGTTTCGTGTTT+TGG | 0.251162 | 8_1:+75285712 | Msa1214570:CDS |
| GCCAGTAATTTACTTTATAC+TGG | 0.256359 | 8_1:-75288245 | Msa1214560:three_prime_UTR |
| CGTCTTTGATGACGAGTCTT+TGG | 0.261701 | 8_1:-75289817 | Msa1214560:intron |
| TTGATCTTTGATAACCAATA+TGG | 0.266214 | 8_1:+75288134 | None:intergenic |
| TGATTCTTGTGTAGATCCTT+TGG | 0.277997 | 8_1:+75287990 | None:intergenic |
| GAAGGTTTAAGGTTTAATTT+AGG | 0.279702 | 8_1:-75285204 | Msa1214560:three_prime_UTR |
| TGATATTTCGGTTACTGTTC+AGG | 0.293998 | 8_1:+75285601 | Msa1214570:CDS |
| AATATTGCGAGGTTGCTTAA+AGG | 0.294551 | 8_1:+75285560 | Msa1214570:CDS |
| ATATTCTTATGCGGTTTATC+AGG | 0.302785 | 8_1:-75285542 | Msa1214560:three_prime_UTR |
| GTGGCCAAACTTCCCTATCT+TGG | 0.304002 | 8_1:-75289126 | Msa1214560:CDS |
| TGGATCTGTGAAATGGTTCT+AGG | 0.307654 | 8_1:-75285167 | Msa1214560:three_prime_UTR |
| CAGGATTCCCAGGATTTCTA+TGG | 0.308076 | 8_1:+75288447 | None:intergenic |
| AAATTACGATCAATCCTTCT+TGG | 0.309641 | 8_1:-75287731 | Msa1214560:three_prime_UTR |
| ATCAGGTAAGTTTCCGAAAT+CGG | 0.318319 | 8_1:-75285525 | Msa1214560:three_prime_UTR |
| CCCTATCTTGGTTTACTTCA+AGG | 0.319304 | 8_1:-75289114 | Msa1214560:CDS |
| CAGTGAAGTTTCTGAAGTTT+GGG | 0.322476 | 8_1:-75288424 | Msa1214560:three_prime_UTR |
| TTGAAAAGCTATTTCTTCAT+TGG | 0.325740 | 8_1:-75287443 | Msa1214560:three_prime_UTR |
| AAGAAATGAATTTGTCCTTC+AGG | 0.326232 | 8_1:+75289077 | None:intergenic |
| GGAAGATGAGCGTTTGTTGC+AGG | 0.326266 | 8_1:+75287618 | Msa1214570:CDS |
| GCAGTACCTGTTGGTCTCCT+TGG | 0.326511 | 8_1:-75289973 | Msa1214560:CDS |
| AAACGGTTTCCATGGCTTCC+AGG | 0.328674 | 8_1:+75290692 | None:intergenic |
| TCAATTTAATTGGAAACTTA+AGG | 0.329224 | 8_1:-75288069 | Msa1214560:three_prime_UTR |
| GACACTCGGTGTTGGTCAAC+TGG | 0.332988 | 8_1:-75287816 | Msa1214560:three_prime_UTR |
| AAAGCAGCTTTATGACATTA+TGG | 0.336753 | 8_1:-75288892 | Msa1214560:CDS |
| TCAACGACGCTGGCGACAAT+AGG | 0.337227 | 8_1:-75285470 | Msa1214560:three_prime_UTR |
| TTTAGGTGAGAATTGAGATT+TGG | 0.337827 | 8_1:-75285187 | Msa1214560:three_prime_UTR |
| TCTGCTCAAAATAGATGTTC+AGG | 0.339107 | 8_1:+75287516 | Msa1214570:CDS |
| GTACCCATTTATGATTTATT+CGG | 0.340238 | 8_1:-75288204 | Msa1214560:three_prime_UTR |
| GTTTCAGGGAAGGAAAATAT+TGG | 0.346413 | 8_1:-75290788 | Msa1214560:intron |
| AGCTGTGTGGCTTGTGCCTC+AGG | 0.348494 | 8_1:-75288816 | Msa1214560:three_prime_UTR |
| GATTCTTGTGTAGATCCTTT+GGG | 0.363229 | 8_1:+75287991 | None:intergenic |
| TCCAGTATAAAGTAAATTAC+TGG | 0.364616 | 8_1:+75288244 | None:intergenic |
| TCCTTGAAGTAAACCAAGAT+AGG | 0.368227 | 8_1:+75289113 | None:intergenic |
| GTACTCAACCTTTGTAAATT+GGG | 0.369511 | 8_1:-75289156 | Msa1214560:CDS |
| AGCCACACAGCTAAGTCTTT+AGG | 0.370742 | 8_1:+75288827 | None:intergenic |
| TGAAGTATAAGAAGAGTAAG+AGG | 0.371661 | 8_1:-75285337 | Msa1214560:three_prime_UTR |
| TTTCCAGTTGGTTGGTAGGC+TGG | 0.378417 | 8_1:+75287375 | Msa1214570:intron |
| GGATGGGTTGGTTGTTGATG+TGG | 0.379859 | 8_1:+75285655 | Msa1214570:CDS |
| ATCAGGTATAGCTGGTGGTT+TGG | 0.381511 | 8_1:-75290019 | Msa1214560:intron |
| ATTTGCTTACAAAGATAATA+GGG | 0.382490 | 8_1:+75289054 | None:intergenic |
| TTTAGTCTCCCAGGGAGGTT+TGG | 0.382719 | 8_1:+75290716 | None:intergenic |
| GATTGAGTTAGAGAAGAAGT+TGG | 0.386192 | 8_1:-75285411 | Msa1214560:three_prime_UTR |
| TGTTTGTTTGAACTCCATAT+TGG | 0.386713 | 8_1:-75288148 | Msa1214560:three_prime_UTR |
| TTTGTTTGAGGCTGCTGCTT+CGG | 0.390574 | 8_1:+75285811 | Msa1214570:CDS |
| ATATTGCGAGGTTGCTTAAA+GGG | 0.391911 | 8_1:+75285561 | Msa1214570:CDS |
| AAGGTGATGAAATTAGGGTT+AGG | 0.392061 | 8_1:-75285383 | Msa1214560:three_prime_UTR |
| AAATTAGGGTTAGGGTTTGA+AGG | 0.397564 | 8_1:-75285374 | Msa1214560:three_prime_UTR |
| TCCCTTCGTCGCAGTGCTCT+CGG | 0.401351 | 8_1:-75288367 | Msa1214560:three_prime_UTR |
| TAAACCAAGATAGGGAAGTT+TGG | 0.401574 | 8_1:+75289122 | None:intergenic |
| TGAACAGTAACCGAAATATC+AGG | 0.412579 | 8_1:-75285599 | Msa1214560:three_prime_UTR |
| TGTTGATGTGGGTGCTAATG+TGG | 0.415117 | 8_1:+75285667 | Msa1214570:CDS |
| GCACTGCGACGAAGGGAAAC+AGG | 0.418874 | 8_1:+75288373 | None:intergenic |
| GATGGGTTGGTTGTTGATGT+GGG | 0.421349 | 8_1:+75285656 | Msa1214570:CDS |
| TGGATTGCTTCTGTTGGTCC+AGG | 0.427331 | 8_1:-75289953 | Msa1214560:intron |
| AGGTGATGAAATTAGGGTTA+GGG | 0.429375 | 8_1:-75285382 | Msa1214560:three_prime_UTR |
| ATCCGAGAGCACTGCGACGA+AGG | 0.430702 | 8_1:+75288365 | None:intergenic |
| GTGATTTAGGAGGTAAAGAT+AGG | 0.432339 | 8_1:-75289314 | Msa1214560:intron |
| TCTGTAGGCAGTAATTGTTT+TGG | 0.436565 | 8_1:-75288785 | Msa1214560:intron |
| GAAATTTAATGCATGTTGAA+TGG | 0.438446 | 8_1:-75287964 | Msa1214560:three_prime_UTR |
| TACAACTTATTTCTTTGAGC+TGG | 0.440973 | 8_1:-75288267 | Msa1214560:three_prime_UTR |
| AACTTCACTGCAGGATTCCC+AGG | 0.441662 | 8_1:+75288437 | None:intergenic |
| TCAGTTATGCAGACTCTAGA+TGG | 0.442742 | 8_1:+75287758 | None:intergenic |
| AATATGGAGTTCAAACAAAC+AGG | 0.443310 | 8_1:+75288150 | None:intergenic |
| GGCGATCAGCTCGATGAATC+AGG | 0.445301 | 8_1:-75289293 | Msa1214560:CDS |
| CAACGACGCTGGCGACAATA+GGG | 0.447619 | 8_1:-75285469 | Msa1214560:three_prime_UTR |
| AGAAGCACGCGCTCTGATGC+TGG | 0.454756 | 8_1:-75287496 | Msa1214560:three_prime_UTR |
| CGACAATAGGGTGAGATTGT+GGG | 0.455532 | 8_1:-75285457 | Msa1214560:three_prime_UTR |
| ATTGTCGCCAGCGTCGTTGA+AGG | 0.456958 | 8_1:+75285473 | Msa1214570:CDS |
| GCTAAGAGTGAGGGGATGGA+TGG | 0.464274 | 8_1:+75285638 | Msa1214570:CDS |
| CAAAATAGATGTTCAGGGCT+GGG | 0.467724 | 8_1:+75287522 | Msa1214570:CDS |
| TTAATTTCCAGTTGGTTGGT+AGG | 0.469103 | 8_1:+75287371 | Msa1214570:intron |
| GAAGAAGAAGAGCGTGTGAC+TGG | 0.469541 | 8_1:-75285145 | Msa1214560:three_prime_UTR |
| CTTCCAGGCTTTAGTCTCCC+AGG | 0.470306 | 8_1:+75290707 | None:intergenic |
| GATCCGAATAAATCATAAAT+GGG | 0.472887 | 8_1:+75288201 | None:intergenic |
| TCAAGTACGCACTGTTCCGC+TGG | 0.473487 | 8_1:+75287462 | Msa1214570:CDS |
| AACAGTGCGGTTTCTGCCAC+AGG | 0.474196 | 8_1:+75287400 | Msa1214570:CDS |
| CATGCATTTGCCATGGACAA+TGG | 0.478447 | 8_1:-75285248 | Msa1214560:three_prime_UTR |
| TTCTGCCACAGGAGCAAAGT+TGG | 0.478586 | 8_1:+75287411 | Msa1214570:CDS |
| GTGTGCATCAGTGCCATGTT+GGG | 0.483129 | 8_1:-75287704 | Msa1214560:three_prime_UTR |
| AGCAATCCAAGGAGACCAAC+AGG | 0.484363 | 8_1:+75289967 | None:intergenic |
| TCTCCTTGGATTGCTTCTGT+TGG | 0.484521 | 8_1:-75289959 | Msa1214560:CDS |
| TCAAAATAGATGTTCAGGGC+TGG | 0.486002 | 8_1:+75287521 | Msa1214570:CDS |
| AACTTCAGAAACTTCACTGC+AGG | 0.486411 | 8_1:+75288428 | None:intergenic |
| TGTCCAGCCTACCAACCAAC+TGG | 0.492010 | 8_1:-75287378 | Msa1214560:intron |
| ATTCTGAATGTCTGATACAC+AGG | 0.492217 | 8_1:-75288094 | Msa1214560:three_prime_UTR |
| GACATTATGGTGGAAAGAGC+CGG | 0.492897 | 8_1:-75288879 | Msa1214560:CDS |
| GTGTTCAATCCAAACCTCCC+TGG | 0.492985 | 8_1:-75290725 | Msa1214560:CDS |
| GAAAATATTGGATGTTTGAG+TGG | 0.495198 | 8_1:-75290776 | Msa1214560:CDS |
| TAACAACAAAACGGTTTCCA+TGG | 0.495913 | 8_1:+75290684 | None:intergenic |
| TGAGATTTGGATCTGTGAAA+TGG | 0.496512 | 8_1:-75285174 | Msa1214560:three_prime_UTR |
| GGATTTGGTTACTTTGTTTG+AGG | 0.498554 | 8_1:+75285799 | Msa1214570:CDS |
| GCGACAATAGGGTGAGATTG+TGG | 0.498962 | 8_1:-75285458 | Msa1214560:three_prime_UTR |
| GAAAGCTAAGAGTGAGGGGA+TGG | 0.499446 | 8_1:+75285634 | Msa1214570:CDS |
| AAGTTTGGGTTGTTTGTAAG+TGG | 0.502291 | 8_1:-75288410 | Msa1214560:three_prime_UTR |
| TTCAAAGTTACTCTCAAGGA+AGG | 0.504924 | 8_1:+75287567 | Msa1214570:CDS |
| AGACTAAAGCCTGGAAGCCA+TGG | 0.505512 | 8_1:-75290701 | Msa1214560:CDS |
| TAGGGTTTGAAGGAGGAGTG+AGG | 0.507910 | 8_1:-75285364 | Msa1214560:three_prime_UTR |
| GCAAATTTGCTTACTTTGGG+AGG | 0.509518 | 8_1:+75290938 | None:intergenic |
| TTCCAGGCTTTAGTCTCCCA+GGG | 0.513117 | 8_1:+75290708 | None:intergenic |
| GGTCTTAATTTCCAGTTGGT+TGG | 0.514715 | 8_1:+75287367 | Msa1214570:intron |
| GTTGATGTGGGTGCTAATGT+GGG | 0.518850 | 8_1:+75285668 | Msa1214570:CDS |
| CTCGACAATTTGCTGACACT+CGG | 0.519486 | 8_1:-75287830 | Msa1214560:three_prime_UTR |
| ATTGTCTTATCAGGTATAGC+TGG | 0.522775 | 8_1:-75290027 | Msa1214560:intron |
| GAGTGAGGGGATGGATGGGT+TGG | 0.523266 | 8_1:+75285643 | Msa1214570:CDS |
| CCTTGAAGTAAACCAAGATA+GGG | 0.523974 | 8_1:+75289114 | None:intergenic |
| TCCGAGAGCACTGCGACGAA+GGG | 0.524338 | 8_1:+75288366 | None:intergenic |
| TCTTCCTCGTATATGAGATA+AGG | 0.525577 | 8_1:-75287601 | Msa1214560:three_prime_UTR |
| CGTATATGAGATAAGGAGCT+TGG | 0.527326 | 8_1:-75287594 | Msa1214560:three_prime_UTR |
| TGTTCAATCCAAACCTCCCT+GGG | 0.527680 | 8_1:-75290724 | Msa1214560:CDS |
| ATGGAAGCAGTTGAGATAGC+TGG | 0.528507 | 8_1:+75287889 | None:intergenic |
| TTAGGGTTAGGGTTTGAAGG+AGG | 0.530643 | 8_1:-75285371 | Msa1214560:three_prime_UTR |
| GGGATTTGATGCAATCGAAA+GGG | 0.531578 | 8_1:-75285436 | Msa1214560:three_prime_UTR |
| CTCCCTGGGAGACTAAAGCC+TGG | 0.533056 | 8_1:-75290710 | Msa1214560:CDS |
| CTGCTCAAAATAGATGTTCA+GGG | 0.535597 | 8_1:+75287517 | Msa1214570:CDS |
| AAATGCCAACTTTGCTCCTG+TGG | 0.539271 | 8_1:-75287416 | Msa1214560:three_prime_UTR |
| GCTGCTGCTTCGGATCGTCT+TGG | 0.540456 | 8_1:+75285821 | Msa1214570:CDS |
| TCGGAAAGAGAGAAGAGAAA+CGG | 0.541737 | 8_1:-75285506 | Msa1214560:three_prime_UTR |
| CTAAGAGTGAGGGGATGGAT+GGG | 0.542239 | 8_1:+75285639 | Msa1214570:CDS |
| CTAGTGCCTGCAGTACCTGT+TGG | 0.544253 | 8_1:-75289982 | Msa1214560:CDS |
| AGTGTGCATCAGTGCCATGT+TGG | 0.544799 | 8_1:-75287705 | Msa1214560:three_prime_UTR |
| GGTTGTTTGTAAGTGGAAGA+TGG | 0.547404 | 8_1:-75288403 | Msa1214560:three_prime_UTR |
| TTCTGCAAATTCTCCAACAC+AGG | 0.549660 | 8_1:-75285743 | Msa1214560:three_prime_UTR |
| TCGAGACTTTCTCCGTAGTG+TGG | 0.549802 | 8_1:+75287666 | Msa1214570:CDS |
| CGAGACTTTCTCCGTAGTGT+GGG | 0.555020 | 8_1:+75287667 | Msa1214570:CDS |
| ACGAACACCTTCAACGACGC+TGG | 0.556633 | 8_1:-75285480 | Msa1214560:three_prime_UTR |
| GGAGGGAAGAAAACGGTGTA+CGG | 0.558028 | 8_1:+75290956 | None:intergenic |
| AGGAGACCAACAGGTACTGC+AGG | 0.559075 | 8_1:+75289976 | None:intergenic |
| GTCTTATCAGGTATAGCTGG+TGG | 0.560370 | 8_1:-75290024 | Msa1214560:intron |
| TTTGAAACCATAGAAATCCT+GGG | 0.562996 | 8_1:-75288454 | Msa1214560:three_prime_UTR |
| GTTTCGCTGCGGCGGTTATG+GGG | 0.563793 | 8_1:+75285699 | Msa1214570:CDS |
| CAAATTTGCTTACTTTGGGA+GGG | 0.566767 | 8_1:+75290939 | None:intergenic |
| ATTTGCAGAAGTTATGTGAA+GGG | 0.566967 | 8_1:+75285756 | Msa1214570:CDS |
| GTGGTGATGATTGAATTTGA+AGG | 0.567093 | 8_1:-75285222 | Msa1214560:three_prime_UTR |
| GGTGAGAATGCTTTCGTCGG+TGG | 0.567378 | 8_1:-75289272 | Msa1214560:CDS |
| TTGTAAATTGGGAATTCTGG+TGG | 0.569408 | 8_1:-75289145 | Msa1214560:CDS |
| ATGATTTATTCGGATCATGT+TGG | 0.570357 | 8_1:-75288194 | Msa1214560:three_prime_UTR |
| TTTGGCGTTTGAGCCTGTGT+TGG | 0.573077 | 8_1:+75285730 | Msa1214570:CDS |
| GAGCTTCAAAGTTACTCTCA+AGG | 0.573311 | 8_1:+75287563 | Msa1214570:CDS |
| GGAAAGTGTTGATTCAAACT+AGG | 0.574065 | 8_1:-75287795 | Msa1214560:three_prime_UTR |
| ACAATTCGATGAATTGATTG+TGG | 0.575337 | 8_1:+75287859 | None:intergenic |
| GACAATAGGGTGAGATTGTG+GGG | 0.577496 | 8_1:-75285456 | Msa1214560:three_prime_UTR |
| TACTTTGGGAGGGAAGAAAA+CGG | 0.579768 | 8_1:+75290949 | None:intergenic |
| CTTGAGAAAGCTAAGAGTGA+GGG | 0.582466 | 8_1:+75285629 | Msa1214570:CDS |
| TTGTTCCACCACACAAAACA+AGG | 0.582560 | 8_1:-75291024 | Msa1214560:five_prime_UTR |
| TCACCACTGTCCATTGTCCA+TGG | 0.585827 | 8_1:+75285238 | None:intergenic |
| TTTGCAGAAGTTATGTGAAG+GGG | 0.586435 | 8_1:+75285757 | Msa1214570:CDS |
| CCAGAATTCCCAATTTACAA+AGG | 0.587587 | 8_1:+75289148 | None:intergenic |
| ATCAAAGACGAATCTCACTC+TGG | 0.595757 | 8_1:+75289830 | None:intergenic |
| TGATGCACACTGCACCAAGA+AGG | 0.595813 | 8_1:+75287717 | Msa1214570:CDS |
| GGGGATTTGATGCAATCGAA+AGG | 0.598736 | 8_1:-75285437 | Msa1214560:three_prime_UTR |
| AATTTGCAGAAGTTATGTGA+AGG | 0.603276 | 8_1:+75285755 | Msa1214570:CDS |
| TATCATGATTGCACCCAACA+TGG | 0.604242 | 8_1:+75287691 | Msa1214570:CDS |
| AATGGCGAGTTTCGCTGCGG+CGG | 0.605541 | 8_1:+75285691 | Msa1214570:CDS |
| CCTCAGGAATCAATGTCTGT+AGG | 0.607400 | 8_1:-75288800 | Msa1214560:three_prime_UTR |
| AATTTGCTGACACTCGGTGT+TGG | 0.609956 | 8_1:-75287824 | Msa1214560:three_prime_UTR |
| TGTGGGTGCTAATGTGGGAA+TGG | 0.612050 | 8_1:+75285673 | Msa1214570:CDS |
| TGGGAATATCATGTTCTCAA+AGG | 0.613591 | 8_1:+75287541 | Msa1214570:CDS |
| GCTTGAGAAAGCTAAGAGTG+AGG | 0.622574 | 8_1:+75285628 | Msa1214570:CDS |
| GCAGCTTTATGACATTATGG+TGG | 0.623832 | 8_1:-75288889 | Msa1214560:CDS |
| AATTGATTGTGGATAAACGA+TGG | 0.626385 | 8_1:+75287870 | None:intergenic |
| AACCTCGCAATATTCTTATG+CGG | 0.626528 | 8_1:-75285551 | Msa1214560:three_prime_UTR |
| TCAAAGTTACTCTCAAGGAA+GGG | 0.627168 | 8_1:+75287568 | Msa1214570:CDS |
| CATTGTCCATGGCAAATGCA+TGG | 0.628684 | 8_1:+75285249 | None:intergenic |
| TATTTCGGTTACTGTTCAGG+AGG | 0.635656 | 8_1:+75285604 | Msa1214570:CDS |
| TCAGGTGAGAATGCTTTCGT+CGG | 0.636439 | 8_1:-75289275 | Msa1214560:CDS |
| GAAACACAAACAAAGCCTGA+AGG | 0.642420 | 8_1:-75289092 | Msa1214560:CDS |
| CAGGCTTTAGTCTCCCAGGG+AGG | 0.642684 | 8_1:+75290711 | None:intergenic |
| GGATTTGATGCAATCGAAAG+GGG | 0.653814 | 8_1:-75285435 | Msa1214560:three_prime_UTR |
| GGTTTCAAGAAATCATTGTG+TGG | 0.660479 | 8_1:-75290755 | Msa1214560:CDS |
| CTTTGGGGAGAGTAAACGAG+AGG | 0.661821 | 8_1:-75285285 | Msa1214560:three_prime_UTR |
| AATCATGATAACCCACACTA+CGG | 0.665119 | 8_1:-75287678 | Msa1214560:three_prime_UTR |
| GGACCAACAGAAGCAATCCA+AGG | 0.668183 | 8_1:+75289956 | None:intergenic |
| ACGGTGTACGGACAACAAAG+TGG | 0.669333 | 8_1:+75290968 | None:intergenic |
| GCTGGAATCACTTCATCCAG+CGG | 0.669971 | 8_1:-75287478 | Msa1214560:three_prime_UTR |
| TTGAGAAAGCTAAGAGTGAG+GGG | 0.670921 | 8_1:+75285630 | Msa1214570:CDS |
| AAAACCTCACTAAAACCCAA+AGG | 0.674003 | 8_1:-75288006 | Msa1214560:three_prime_UTR |
| AAAGACGAATCTCACTCTGG+TGG | 0.674566 | 8_1:+75289833 | None:intergenic |
| TTTGGGGAGAGTAAACGAGA+GGG | 0.678894 | 8_1:-75285284 | Msa1214560:three_prime_UTR |
| ATCCTAAAGACTTAGCTGTG+TGG | 0.686936 | 8_1:-75288829 | Msa1214560:exon |
| TGGTAGGCTGGACAACAGTG+CGG | 0.687351 | 8_1:+75287387 | Msa1214570:CDS |
| AGCTCCTTATCTCATATACG+AGG | 0.689074 | 8_1:+75287597 | Msa1214570:CDS |
| CCTACAGACATTGATTCCTG+AGG | 0.697530 | 8_1:+75288800 | None:intergenic |
| AACCGCATAAGAATATTGCG+AGG | 0.711570 | 8_1:+75285549 | Msa1214570:CDS |
| GGGAATGGCGAGTTTCGCTG+CGG | 0.716846 | 8_1:+75285688 | Msa1214570:CDS |
| TTGCCATGGACAATGGACAG+TGG | 0.758874 | 8_1:-75285241 | Msa1214560:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTTTTTAGAAAAATAAATGA+TGG | + | chr8_1:75286410-75286429 | Msa1214570:intron | 15.0% |
| !! | TAATACAAAACACATTATAA+TGG | + | chr8_1:75286752-75286771 | Msa1214570:intron | 15.0% |
| !! | AAAATATGTTTATATGATGT+AGG | - | chr8_1:75286948-75286967 | Msa1214560:intron | 15.0% |
| !! | GTAAAGTAAATATACAAAAT+AGG | - | chr8_1:75287105-75287124 | Msa1214560:intron | 15.0% |
| !! | GTATGTTTATTTAAATGAAA+TGG | + | chr8_1:75288924-75288943 | None:intergenic | 15.0% |
| !! | GAATACAATATATAAATTAG+TGG | + | chr8_1:75289667-75289686 | None:intergenic | 15.0% |
| !! | TTGTATGTGAATAATATAAT+TGG | + | chr8_1:75289799-75289818 | None:intergenic | 15.0% |
| !!! | CACTTTTTTATATTAGTTGT+TGG | - | chr8_1:75285297-75285316 | Msa1214560:three_prime_UTR | 20.0% |
| !! | TTTATTAATCTGCTTATACA+AGG | + | chr8_1:75286054-75286073 | Msa1214570:intron | 20.0% |
| !! | AGATTAATAAACATCCTAAA+AGG | - | chr8_1:75286063-75286082 | Msa1214560:intron | 20.0% |
| !! | ATAATTAGAGAAAAAACACT+TGG | + | chr8_1:75286253-75286272 | Msa1214570:intron | 20.0% |
| !! | CATATTTATTATGACTAGAA+GGG | + | chr8_1:75286432-75286451 | Msa1214570:intron | 20.0% |
| !! | TCATATTTATTATGACTAGA+AGG | + | chr8_1:75286433-75286452 | Msa1214570:intron | 20.0% |
| !! | ATTTGCTTACAAAGATAATA+GGG | + | chr8_1:75287075-75287094 | Msa1214570:intron | 20.0% |
| !!! | AATTTGCTTACAAAGATAAT+AGG | + | chr8_1:75287076-75287095 | Msa1214570:intron | 20.0% |
| !!! | TTTTGTGGTACAAAAATTAA+GGG | + | chr8_1:75287485-75287504 | Msa1214570:CDS | 20.0% |
| !!! | TTAATTTTTGTACCACAAAA+GGG | - | chr8_1:75287485-75287504 | Msa1214560:three_prime_UTR | 20.0% |
| !! | TCAATTTAATTGGAAACTTA+AGG | - | chr8_1:75288057-75288076 | Msa1214560:three_prime_UTR | 20.0% |
| !!! | ATGTTTTTATTTTCTCTTTG+GGG | + | chr8_1:75288783-75288802 | None:intergenic | 20.0% |
| !!! | GATGTTTTTATTTTCTCTTT+GGG | + | chr8_1:75288784-75288803 | None:intergenic | 20.0% |
| !!! | TGATGTTTTTATTTTCTCTT+TGG | + | chr8_1:75288785-75288804 | None:intergenic | 20.0% |
| !!! | TTTTAGACATGAAAAGTAAA+TGG | + | chr8_1:75288863-75288882 | None:intergenic | 20.0% |
| !! | ATTTAAATGAAATGGTTATG+AGG | + | chr8_1:75288916-75288935 | None:intergenic | 20.0% |
| !!! | AACCAAAAATAGAACAATTT+TGG | - | chr8_1:75288990-75289009 | Msa1214560:intron | 20.0% |
| !!! | AACCAAAATTGTTCTATTTT+TGG | + | chr8_1:75288995-75289014 | None:intergenic | 20.0% |
| !!! | ACCTTATCTAAAATAAACTA+AGG | - | chr8_1:75289704-75289723 | Msa1214560:intron | 20.0% |
| !!! | TCCTTAGTTTATTTTAGATA+AGG | + | chr8_1:75289708-75289727 | None:intergenic | 20.0% |
| !! | TGTGAATAATATAATTGGTT+AGG | + | chr8_1:75289794-75289813 | None:intergenic | 20.0% |
| !!! | CTTGATTTTCTAAAATTTGA+AGG | + | chr8_1:75290013-75290032 | None:intergenic | 20.0% |
| !!! | CTTCAAATTTTAGAAAATCA+AGG | - | chr8_1:75290011-75290030 | Msa1214560:CDS | 20.0% |
| !!! | ATTTTGGTTCATATAGTTTA+TGG | + | chr8_1:75290213-75290232 | None:intergenic | 20.0% |
| !!! | TTTTTAAGGTGATGAAATTA+GGG | - | chr8_1:75290738-75290757 | Msa1214560:CDS | 20.0% |
| !! | TTTTGTGTATCAGAAACAAA+TGG | - | chr8_1:75285132-75285151 | Msa1214560:three_prime_UTR | 25.0% |
| !!! | TGGCTCTATGTTTTTTTTTA+TGG | - | chr8_1:75285491-75285510 | Msa1214560:three_prime_UTR | 25.0% |
| ! | TGGTTACATCCAATTATTAT+AGG | - | chr8_1:75285630-75285649 | Msa1214560:three_prime_UTR | 25.0% |
| ! | ATATCGACACCTATAATAAT+TGG | + | chr8_1:75285642-75285661 | Msa1214570:CDS | 25.0% |
| !!! | AATTATTATAGGTGTCGATA+TGG | - | chr8_1:75285641-75285660 | Msa1214560:three_prime_UTR | 25.0% |
| !! | TTCTCTTTTCGCATAATTTT+AGG | - | chr8_1:75285837-75285856 | Msa1214560:three_prime_UTR | 25.0% |
| ! | AGGCGTACTATAATATAATT+TGG | - | chr8_1:75285857-75285876 | Msa1214560:intron | 25.0% |
| !! | ATCTATTGCCTTAATTTTGT+TGG | - | chr8_1:75285944-75285963 | Msa1214560:intron | 25.0% |
| !! | TCTATTGCCTTAATTTTGTT+GGG | - | chr8_1:75285945-75285964 | Msa1214560:intron | 25.0% |
| ! | TGACTTATAATTGTCTTATC+AGG | - | chr8_1:75286090-75286109 | Msa1214560:intron | 25.0% |
| !! | TTCTTCTATTGATAATTACC+TGG | + | chr8_1:75286194-75286213 | Msa1214570:intron | 25.0% |
| ! | GAAGAAACTGTAATTAAGAA+AGG | - | chr8_1:75286208-75286227 | Msa1214560:intron | 25.0% |
| !!! | TATTTGCTTTTTATTTTCGC+AGG | - | chr8_1:75286270-75286289 | Msa1214560:intron | 25.0% |
| ! | TTGGAAAGAAAATACTACTA+TGG | + | chr8_1:75286376-75286395 | Msa1214570:intron | 25.0% |
| ! | TGAACTTATGCAATATTAGA+AGG | + | chr8_1:75286539-75286558 | Msa1214570:intron | 25.0% |
| ! | CTGAAAAATTGGATGATTAT+TGG | + | chr8_1:75286675-75286694 | Msa1214570:intron | 25.0% |
| ! | TAGAATGGTAACTGAAAAAT+TGG | + | chr8_1:75286686-75286705 | Msa1214570:intron | 25.0% |
| ! | TTACATGCAAAATGTGATTT+AGG | - | chr8_1:75286799-75286818 | Msa1214560:intron | 25.0% |
| ! | GTCAATGTTGAAACAAAAAT+AGG | + | chr8_1:75286903-75286922 | Msa1214570:intron | 25.0% |
| !!! | TAAGTCTTTAGGATTCTTTT+GGG | + | chr8_1:75287291-75287310 | Msa1214570:intron | 25.0% |
| !! | CTTTTGTGGTACAAAAATTA+AGG | + | chr8_1:75287486-75287505 | Msa1214570:CDS | 25.0% |
| !! | CTTAATTTTTGTACCACAAA+AGG | - | chr8_1:75287484-75287503 | Msa1214560:three_prime_UTR | 25.0% |
| ! | TGATACAATACCAATGATAT+AGG | + | chr8_1:75287581-75287600 | Msa1214570:CDS | 25.0% |
| ! | TCCAGTATAAAGTAAATTAC+TGG | + | chr8_1:75287885-75287904 | None:intergenic | 25.0% |
| ! | GTACCCATTTATGATTTATT+CGG | - | chr8_1:75287922-75287941 | Msa1214560:three_prime_UTR | 25.0% |
| ! | GATCCGAATAAATCATAAAT+GGG | + | chr8_1:75287928-75287947 | None:intergenic | 25.0% |
| ! | TGATCCGAATAAATCATAAA+TGG | + | chr8_1:75287929-75287948 | None:intergenic | 25.0% |
| !! | TTGATCTTTGATAACCAATA+TGG | + | chr8_1:75287995-75288014 | None:intergenic | 25.0% |
| ! | TACACAGGTTTCAATTTAAT+TGG | - | chr8_1:75288047-75288066 | Msa1214560:intron | 25.0% |
| !!! | GTATACAAGCTTTTAATTGT+AGG | + | chr8_1:75288100-75288119 | None:intergenic | 25.0% |
| ! | GAAATTTAATGCATGTTGAA+TGG | - | chr8_1:75288162-75288181 | Msa1214560:three_prime_UTR | 25.0% |
| !!! | TTGAAAAGCTATTTCTTCAT+TGG | - | chr8_1:75288683-75288702 | Msa1214560:intron | 25.0% |
| ! | AACATACACATTCATTGAAT+CGG | - | chr8_1:75288937-75288956 | Msa1214560:intron | 25.0% |
| ! | ACGAATTTATACGCATTAAT+TGG | + | chr8_1:75289295-75289314 | None:intergenic | 25.0% |
| !! | AATTCGTATATTTGTTAAGC+AGG | - | chr8_1:75289308-75289327 | Msa1214560:CDS | 25.0% |
| !! | ATTCGTATATTTGTTAAGCA+GGG | - | chr8_1:75289309-75289328 | Msa1214560:intron | 25.0% |
| !! | GAGTTTTTACTTTCTTAGTT+AGG | + | chr8_1:75289452-75289471 | None:intergenic | 25.0% |
| ! | AGTAAAAACTCATAAAGACA+TGG | - | chr8_1:75289461-75289480 | Msa1214560:intron | 25.0% |
| ! | AAGTTATTAAGATGCTAAGT+AGG | + | chr8_1:75289644-75289663 | None:intergenic | 25.0% |
| ! | TTTATGCTAATAACAACACT+TGG | + | chr8_1:75289888-75289907 | None:intergenic | 25.0% |
| ! | AATAGATAGATAGCATTCTA+CGG | - | chr8_1:75289927-75289946 | Msa1214560:intron | 25.0% |
| !! | GTTTAGACTTTAGAAAGTAT+AGG | + | chr8_1:75290080-75290099 | None:intergenic | 25.0% |
| !!! | TTTTTTGAGCTCATTACTAT+AGG | - | chr8_1:75290119-75290138 | Msa1214560:intron | 25.0% |
| !! | GCTTGAATTGAATTGAATTT+TGG | + | chr8_1:75290229-75290248 | None:intergenic | 25.0% |
| ! | ATTTCTTGTGATTAAGTTTG+TGG | + | chr8_1:75290261-75290280 | None:intergenic | 25.0% |
| ! | AAGAAATCTAACCTTATGAA+CGG | - | chr8_1:75290274-75290293 | Msa1214560:intron | 25.0% |
| !!! | GGTTTATTTTAATAGAGTTG+CGG | + | chr8_1:75290351-75290370 | None:intergenic | 25.0% |
| !!! | TTTTAGGAAACCTGATATTT+CGG | + | chr8_1:75290540-75290559 | None:intergenic | 25.0% |
| !!! | GTTTTTAAGGTGATGAAATT+AGG | - | chr8_1:75290737-75290756 | Msa1214560:CDS | 25.0% |
| ! | AAGAGTAAAAAAAGAAGCTT+TGG | - | chr8_1:75290824-75290843 | Msa1214560:intron | 25.0% |
| ! | AGAGTAAAAAAAGAAGCTTT+GGG | - | chr8_1:75290825-75290844 | Msa1214560:intron | 25.0% |
| ! | TGATTGAATTTGAAGGTTTA+AGG | - | chr8_1:75290911-75290930 | Msa1214560:intron | 25.0% |
| !! | GAAGGTTTAAGGTTTAATTT+AGG | - | chr8_1:75290922-75290941 | Msa1214560:intron | 25.0% |
| ! | CATGCAAATTTGCTTACTTT+GGG | + | chr8_1:75285194-75285213 | None:intergenic | 30.0% |
| ! | ACATGCAAATTTGCTTACTT+TGG | + | chr8_1:75285195-75285214 | None:intergenic | 30.0% |
| AGCAAATTTGCATGTAACTT+TGG | - | chr8_1:75285200-75285219 | Msa1214560:three_prime_UTR | 30.0% | |
| !!! | TTAGTTGTTGGCTTTTAATG+TGG | - | chr8_1:75285309-75285328 | Msa1214560:three_prime_UTR | 30.0% |
| GAAAATATTGGATGTTTGAG+TGG | - | chr8_1:75285350-75285369 | Msa1214560:three_prime_UTR | 30.0% | |
| GAATTTCATTGTTGACAGTT+TGG | - | chr8_1:75285720-75285739 | Msa1214560:three_prime_UTR | 30.0% | |
| ! | TTTTCAGATGATTCAAACAC+AGG | + | chr8_1:75285904-75285923 | Msa1214570:intron | 30.0% |
| GGCAATAGATAGTTAACAAA+GGG | + | chr8_1:75285934-75285953 | Msa1214570:intron | 30.0% | |
| AGGCAATAGATAGTTAACAA+AGG | + | chr8_1:75285935-75285954 | Msa1214570:intron | 30.0% | |
| ! | TTATAAGTCATCAGCCTTTT+AGG | + | chr8_1:75286080-75286099 | Msa1214570:intron | 30.0% |
| AACAAGAAAAATTCTTGGAG+AGG | + | chr8_1:75286350-75286369 | Msa1214570:intron | 30.0% | |
| GGACAAACAAGAAAAATTCT+TGG | + | chr8_1:75286355-75286374 | Msa1214570:intron | 30.0% | |
| ATATTAGAAGGAGAAAGATG+TGG | + | chr8_1:75286527-75286546 | Msa1214570:intron | 30.0% | |
| !! | GTTTGGTCTTTTTGAATCAA+AGG | + | chr8_1:75286576-75286595 | Msa1214570:intron | 30.0% |
| ! | TTTGATCAATTGCTACTTCA+TGG | - | chr8_1:75286636-75286655 | Msa1214560:intron | 30.0% |
| GATGAAGTTGTAGATTAGAA+TGG | + | chr8_1:75286701-75286720 | Msa1214570:intron | 30.0% | |
| GACTAGACTTTAACAACAAT+AGG | - | chr8_1:75286920-75286939 | Msa1214560:intron | 30.0% | |
| GTACTCAACCTTTGTAAATT+GGG | - | chr8_1:75286970-75286989 | Msa1214560:intron | 30.0% | |
| AAGAAATGAATTTGTCCTTC+AGG | + | chr8_1:75287052-75287071 | Msa1214570:intron | 30.0% | |
| ! | AAAGCAGCTTTATGACATTA+TGG | - | chr8_1:75287234-75287253 | Msa1214560:intron | 30.0% |
| !!! | AAGTCTTTAGGATTCTTTTG+GGG | + | chr8_1:75287290-75287309 | Msa1214570:intron | 30.0% |
| !!! | CTAAGTCTTTAGGATTCTTT+TGG | + | chr8_1:75287292-75287311 | Msa1214570:intron | 30.0% |
| TAGAAATTTACAGCCTAAAG+TGG | + | chr8_1:75287411-75287430 | Msa1214570:CDS | 30.0% | |
| TTGGTATTGTATCAGTTTAG+CGG | - | chr8_1:75287587-75287606 | Msa1214560:three_prime_UTR | 30.0% | |
| !!! | TTTTGAAACCATAGAAATCC+TGG | - | chr8_1:75287671-75287690 | Msa1214560:three_prime_UTR | 30.0% |
| ! | TTTGAAACCATAGAAATCCT+GGG | - | chr8_1:75287672-75287691 | Msa1214560:three_prime_UTR | 30.0% |
| ! | TACAACTTATTTCTTTGAGC+TGG | - | chr8_1:75287859-75287878 | Msa1214560:three_prime_UTR | 30.0% |
| GCCAGTAATTTACTTTATAC+TGG | - | chr8_1:75287881-75287900 | Msa1214560:three_prime_UTR | 30.0% | |
| ATGATTTATTCGGATCATGT+TGG | - | chr8_1:75287932-75287951 | Msa1214560:three_prime_UTR | 30.0% | |
| AATATGGAGTTCAAACAAAC+AGG | + | chr8_1:75287979-75287998 | None:intergenic | 30.0% | |
| TGTTTGTTTGAACTCCATAT+TGG | - | chr8_1:75287978-75287997 | Msa1214560:three_prime_UTR | 30.0% | |
| AATTGATTGTGGATAAACGA+TGG | + | chr8_1:75288259-75288278 | None:intergenic | 30.0% | |
| ACAATTCGATGAATTGATTG+TGG | + | chr8_1:75288270-75288289 | None:intergenic | 30.0% | |
| ! | AGAAGGATTGATCGTAATTT+TGG | + | chr8_1:75288395-75288414 | None:intergenic | 30.0% |
| AAATTACGATCAATCCTTCT+TGG | - | chr8_1:75288395-75288414 | Msa1214560:three_prime_UTR | 30.0% | |
| ACATACACATTCATTGAATC+GGG | - | chr8_1:75288938-75288957 | Msa1214560:intron | 30.0% | |
| CTTAAGAATAATGCACAAGA+TGG | + | chr8_1:75289045-75289064 | None:intergenic | 30.0% | |
| !!! | GTTTTTTGAAGTATCCTCTT+AGG | + | chr8_1:75289131-75289150 | None:intergenic | 30.0% |
| AACAAAAAAACTTGCCTAAG+AGG | - | chr8_1:75289152-75289171 | Msa1214560:CDS | 30.0% | |
| ! | TTATACGCATTAATTGGTCT+CGG | + | chr8_1:75289289-75289308 | None:intergenic | 30.0% |
| !! | AACAGAAAAAGTATCTCCTA+AGG | - | chr8_1:75289405-75289424 | Msa1214560:intron | 30.0% |
| AAACATGACCTTAATGAAGA+TGG | + | chr8_1:75289510-75289529 | None:intergenic | 30.0% | |
| ACGGATGTGGAAAAAATAAA+TGG | - | chr8_1:75289842-75289861 | Msa1214560:intron | 30.0% | |
| GATGTGGAAAAAATAAATGG+CGG | - | chr8_1:75289845-75289864 | Msa1214560:intron | 30.0% | |
| ATGTGGAAAAAATAAATGGC+GGG | - | chr8_1:75289846-75289865 | Msa1214560:intron | 30.0% | |
| TGCAAAGTAGGATTACTATA+TGG | - | chr8_1:75289957-75289976 | Msa1214560:CDS | 30.0% | |
| TACTATATGGAATATCCAAC+CGG | - | chr8_1:75289970-75289989 | Msa1214560:CDS | 30.0% | |
| ! | TTTTAATAGAGTTGCGGATT+TGG | + | chr8_1:75290345-75290364 | None:intergenic | 30.0% |
| ATTTGCAGAAGTTATGTGAA+GGG | + | chr8_1:75290373-75290392 | None:intergenic | 30.0% | |
| AATTTGCAGAAGTTATGTGA+AGG | + | chr8_1:75290374-75290393 | None:intergenic | 30.0% | |
| ATATTCTTATGCGGTTTATC+AGG | - | chr8_1:75290584-75290603 | Msa1214560:intron | 30.0% | |
| !!! | AGAGAAGAAGTTGGTTTTTA+AGG | - | chr8_1:75290724-75290743 | Msa1214560:CDS | 30.0% |
| TGAAGTATAAGAAGAGTAAG+AGG | - | chr8_1:75290789-75290808 | Msa1214560:intron | 30.0% | |
| GAGTAAAAAAAGAAGCTTTG+GGG | - | chr8_1:75290826-75290845 | Msa1214560:intron | 30.0% | |
| TTTAGGTGAGAATTGAGATT+TGG | - | chr8_1:75290939-75290958 | Msa1214560:intron | 30.0% | |
| !!! | ATCTATCACCTTGTTTTGTG+TGG | + | chr8_1:75285113-75285132 | None:intergenic | 35.0% |
| ! | CAAATTTGCTTACTTTGGGA+GGG | + | chr8_1:75285190-75285209 | None:intergenic | 35.0% |
| !!! | TTGTTGGCTTTTAATGTGGT+TGG | - | chr8_1:75285313-75285332 | Msa1214560:three_prime_UTR | 35.0% |
| ! | TTAATGTGGTTGGTTGTTTC+AGG | - | chr8_1:75285323-75285342 | Msa1214560:three_prime_UTR | 35.0% |
| ! | TAATGTGGTTGGTTGTTTCA+GGG | - | chr8_1:75285324-75285343 | Msa1214560:three_prime_UTR | 35.0% |
| GTTTCAGGGAAGGAAAATAT+TGG | - | chr8_1:75285338-75285357 | Msa1214560:three_prime_UTR | 35.0% | |
| GGTTTCAAGAAATCATTGTG+TGG | - | chr8_1:75285371-75285390 | Msa1214560:three_prime_UTR | 35.0% | |
| TAACAACAAAACGGTTTCCA+TGG | + | chr8_1:75285445-75285464 | Msa1214570:CDS | 35.0% | |
| CCAGTGAGTTAACAACAAAA+CGG | + | chr8_1:75285454-75285473 | Msa1214570:CDS | 35.0% | |
| !! | ATGAAGCATTGATGCATATG+TGG | + | chr8_1:75285674-75285693 | Msa1214570:CDS | 35.0% |
| ! | CATTGTTGACAGTTTGGAAT+TGG | - | chr8_1:75285726-75285745 | Msa1214560:three_prime_UTR | 35.0% |
| ! | ACAGTTTGGAATTGGAAAGA+AGG | - | chr8_1:75285734-75285753 | Msa1214560:three_prime_UTR | 35.0% |
| AGAATTCCAGTTGTACTACT+TGG | - | chr8_1:75285804-75285823 | Msa1214560:three_prime_UTR | 35.0% | |
| TAACTACCAAGTAGTACAAC+TGG | + | chr8_1:75285813-75285832 | Msa1214570:CDS | 35.0% | |
| CAAAGGACCCAACAAAATTA+AGG | + | chr8_1:75285955-75285974 | Msa1214570:intron | 35.0% | |
| TCTGATTCACCAAGTATCAA+AGG | + | chr8_1:75285972-75285991 | Msa1214570:intron | 35.0% | |
| TTGGTGAATCAGAATCTTGA+GGG | - | chr8_1:75285979-75285998 | Msa1214560:intron | 35.0% | |
| ATTGTCTTATCAGGTATAGC+TGG | - | chr8_1:75286099-75286118 | Msa1214560:intron | 35.0% | |
| AATTCTTGGAGAGGTAAGAA+GGG | + | chr8_1:75286341-75286360 | Msa1214570:intron | 35.0% | |
| AAATTCTTGGAGAGGTAAGA+AGG | + | chr8_1:75286342-75286361 | Msa1214570:intron | 35.0% | |
| ! | AATGATGGAAAGCAAGTGAT+TGG | + | chr8_1:75286395-75286414 | Msa1214570:intron | 35.0% |
| ! | CAACTGTTTCTCAGAAATCA+TGG | + | chr8_1:75286471-75286490 | Msa1214570:intron | 35.0% |
| ! | TGTTTAGTAGTACTGGAGTT+TGG | + | chr8_1:75286593-75286612 | Msa1214570:intron | 35.0% |
| CATAGCATGTTTAGTAGTAC+TGG | + | chr8_1:75286600-75286619 | Msa1214570:intron | 35.0% | |
| CATGCAAAATGTGATTTAGG+AGG | - | chr8_1:75286802-75286821 | Msa1214560:intron | 35.0% | |
| GTGATTTAGGAGGTAAAGAT+AGG | - | chr8_1:75286812-75286831 | Msa1214560:intron | 35.0% | |
| GGTACTCAACCTTTGTAAAT+TGG | - | chr8_1:75286969-75286988 | Msa1214560:intron | 35.0% | |
| CCAGAATTCCCAATTTACAA+AGG | + | chr8_1:75286981-75287000 | Msa1214570:intron | 35.0% | |
| CCTTTGTAAATTGGGAATTC+TGG | - | chr8_1:75286978-75286997 | Msa1214560:intron | 35.0% | |
| TTGTAAATTGGGAATTCTGG+TGG | - | chr8_1:75286981-75287000 | Msa1214560:intron | 35.0% | |
| TAAACCAAGATAGGGAAGTT+TGG | + | chr8_1:75287007-75287026 | Msa1214570:intron | 35.0% | |
| CCTTGAAGTAAACCAAGATA+GGG | + | chr8_1:75287015-75287034 | Msa1214570:intron | 35.0% | |
| TCCTTGAAGTAAACCAAGAT+AGG | + | chr8_1:75287016-75287035 | Msa1214570:intron | 35.0% | |
| ! | TGTTCTTCATTGTTTCTTGC+TGG | - | chr8_1:75287189-75287208 | Msa1214560:intron | 35.0% |
| ! | TCTGTAGGCAGTAATTGTTT+TGG | - | chr8_1:75287341-75287360 | Msa1214560:intron | 35.0% |
| !! | GTTTTAGCATCAACCACTTT+AGG | - | chr8_1:75287395-75287414 | Msa1214560:three_prime_UTR | 35.0% |
| GACATTAGTGCCTATATCAT+TGG | - | chr8_1:75287568-75287587 | Msa1214560:three_prime_UTR | 35.0% | |
| GCGGTATATGCATAATACAA+TGG | - | chr8_1:75287606-75287625 | Msa1214560:three_prime_UTR | 35.0% | |
| !! | CAGTGAAGTTTCTGAAGTTT+GGG | - | chr8_1:75287702-75287721 | Msa1214560:three_prime_UTR | 35.0% |
| !! | AAGTTTGGGTTGTTTGTAAG+TGG | - | chr8_1:75287716-75287735 | Msa1214560:three_prime_UTR | 35.0% |
| ATTCTGAATGTCTGATACAC+AGG | - | chr8_1:75288032-75288051 | Msa1214560:intron | 35.0% | |
| AAAACCTCACTAAAACCCAA+AGG | - | chr8_1:75288120-75288139 | Msa1214560:three_prime_UTR | 35.0% | |
| GATTCTTGTGTAGATCCTTT+GGG | + | chr8_1:75288138-75288157 | None:intergenic | 35.0% | |
| TGATTCTTGTGTAGATCCTT+TGG | + | chr8_1:75288139-75288158 | None:intergenic | 35.0% | |
| !! | GGAAAGTGTTGATTCAAACT+AGG | - | chr8_1:75288331-75288350 | Msa1214560:three_prime_UTR | 35.0% |
| AATCATGATAACCCACACTA+CGG | - | chr8_1:75288448-75288467 | Msa1214560:three_prime_UTR | 35.0% | |
| TTCTTTAGCACTGCTATTAC+TGG | - | chr8_1:75288485-75288504 | Msa1214560:intron | 35.0% | |
| TCTTCCTCGTATATGAGATA+AGG | - | chr8_1:75288525-75288544 | Msa1214560:intron | 35.0% | |
| TCAAAGTTACTCTCAAGGAA+GGG | + | chr8_1:75288561-75288580 | None:intergenic | 35.0% | |
| TTCAAAGTTACTCTCAAGGA+AGG | + | chr8_1:75288562-75288581 | None:intergenic | 35.0% | |
| TGGGAATATCATGTTCTCAA+AGG | + | chr8_1:75288588-75288607 | None:intergenic | 35.0% | |
| CTGCTCAAAATAGATGTTCA+GGG | + | chr8_1:75288612-75288631 | None:intergenic | 35.0% | |
| TCTGCTCAAAATAGATGTTC+AGG | + | chr8_1:75288613-75288632 | None:intergenic | 35.0% | |
| TTAATTTCCAGTTGGTTGGT+AGG | + | chr8_1:75288758-75288777 | None:intergenic | 35.0% | |
| AAACATCAGCCATGAATGAT+AGG | - | chr8_1:75288797-75288816 | Msa1214560:three_prime_UTR | 35.0% | |
| TAGCAGCATTGCATGATAAA+TGG | - | chr8_1:75288823-75288842 | Msa1214560:three_prime_UTR | 35.0% | |
| CATACACATTCATTGAATCG+GGG | - | chr8_1:75288939-75288958 | Msa1214560:intron | 35.0% | |
| AGTGTCAATATTCTCCTCTT+AGG | + | chr8_1:75289169-75289188 | None:intergenic | 35.0% | |
| CATATGCCATTCCAAATGAA+TGG | - | chr8_1:75289263-75289282 | Msa1214560:CDS | 35.0% | |
| ! | GACCTTAATGAAGATGGATT+GGG | + | chr8_1:75289504-75289523 | None:intergenic | 35.0% |
| TGACCTTAATGAAGATGGAT+TGG | + | chr8_1:75289505-75289524 | None:intergenic | 35.0% | |
| TTTGTGTGGAGCTAATATTG+AGG | + | chr8_1:75289604-75289623 | None:intergenic | 35.0% | |
| CAATATTAGCTCCACACAAA+TGG | - | chr8_1:75289604-75289623 | Msa1214560:intron | 35.0% | |
| CGAGTATAGTAAGCAATTAG+AGG | + | chr8_1:75289747-75289766 | None:intergenic | 35.0% | |
| CTTACTATACTCGAACTAGA+CGG | - | chr8_1:75289754-75289773 | Msa1214560:intron | 35.0% | |
| AACTTAGGTTTGTGAGTAGT+TGG | + | chr8_1:75290150-75290169 | None:intergenic | 35.0% | |
| AGGGATTGTAGTAGAAACTT+AGG | + | chr8_1:75290165-75290184 | None:intergenic | 35.0% | |
| TGTGAATTGAACTGTAGTGA+GGG | + | chr8_1:75290184-75290203 | None:intergenic | 35.0% | |
| TTGTGAATTGAACTGTAGTG+AGG | + | chr8_1:75290185-75290204 | None:intergenic | 35.0% | |
| TGGTAACATTACCGTTCATA+AGG | + | chr8_1:75290288-75290307 | None:intergenic | 35.0% | |
| ! | GGATTTGGTTACTTTGTTTG+AGG | + | chr8_1:75290330-75290349 | None:intergenic | 35.0% |
| TTTGCAGAAGTTATGTGAAG+GGG | + | chr8_1:75290372-75290391 | None:intergenic | 35.0% | |
| TGATATTTCGGTTACTGTTC+AGG | + | chr8_1:75290528-75290547 | None:intergenic | 35.0% | |
| TGAACAGTAACCGAAATATC+AGG | - | chr8_1:75290527-75290546 | Msa1214560:intron | 35.0% | |
| ! | TGCTTAAAGGGAAAGCTTTT+AGG | + | chr8_1:75290556-75290575 | None:intergenic | 35.0% |
| ATATTGCGAGGTTGCTTAAA+GGG | + | chr8_1:75290568-75290587 | None:intergenic | 35.0% | |
| AATATTGCGAGGTTGCTTAA+AGG | + | chr8_1:75290569-75290588 | None:intergenic | 35.0% | |
| AACCTCGCAATATTCTTATG+CGG | - | chr8_1:75290575-75290594 | Msa1214560:intron | 35.0% | |
| ATCAGGTAAGTTTCCGAAAT+CGG | - | chr8_1:75290601-75290620 | Msa1214560:intron | 35.0% | |
| GATTGAGTTAGAGAAGAAGT+TGG | - | chr8_1:75290715-75290734 | Msa1214560:CDS | 35.0% | |
| AAGGTGATGAAATTAGGGTT+AGG | - | chr8_1:75290743-75290762 | Msa1214560:CDS | 35.0% | |
| AGGTGATGAAATTAGGGTTA+GGG | - | chr8_1:75290744-75290763 | Msa1214560:CDS | 35.0% | |
| AAATTAGGGTTAGGGTTTGA+AGG | - | chr8_1:75290752-75290771 | Msa1214560:CDS | 35.0% | |
| ! | GTGGTGATGATTGAATTTGA+AGG | - | chr8_1:75290904-75290923 | Msa1214560:intron | 35.0% |
| TGAGATTTGGATCTGTGAAA+TGG | - | chr8_1:75290952-75290971 | Msa1214560:CDS | 35.0% | |
| TTGTTCCACCACACAAAACA+AGG | - | chr8_1:75285102-75285121 | Msa1214560:three_prime_UTR | 40.0% | |
| !!! | TATCACCTTGTTTTGTGTGG+TGG | + | chr8_1:75285110-75285129 | None:intergenic | 40.0% |
| ! | TACTTTGGGAGGGAAGAAAA+CGG | + | chr8_1:75285180-75285199 | None:intergenic | 40.0% |
| ! | GCAAATTTGCTTACTTTGGG+AGG | + | chr8_1:75285191-75285210 | None:intergenic | 40.0% |
| !!! | CCGTTTTGTTGTTAACTCAC+TGG | - | chr8_1:75285451-75285470 | Msa1214560:three_prime_UTR | 40.0% |
| AAAAAACATAGAGCCACTCG+AGG | + | chr8_1:75285487-75285506 | Msa1214570:CDS | 40.0% | |
| ! | CTTCAGATTGAAAGCGTGTA+TGG | - | chr8_1:75285595-75285614 | Msa1214560:three_prime_UTR | 40.0% |
| ACAACTGGAATTCTGTAGTC+TGG | + | chr8_1:75285798-75285817 | Msa1214570:CDS | 40.0% | |
| GGCCAGTTACAATCAAATGA+AGG | - | chr8_1:75285878-75285897 | Msa1214560:intron | 40.0% | |
| GGCCTTCATTTGATTGTAAC+TGG | + | chr8_1:75285883-75285902 | Msa1214570:intron | 40.0% | |
| TTGTTGGGTCCTTTGATACT+TGG | - | chr8_1:75285960-75285979 | Msa1214560:intron | 40.0% | |
| CTTGGTGAATCAGAATCTTG+AGG | - | chr8_1:75285978-75285997 | Msa1214560:intron | 40.0% | |
| ATCAAAGACGAATCTCACTC+TGG | + | chr8_1:75286299-75286318 | Msa1214570:intron | 40.0% | |
| ! | CTGTTTCTCAGAAATCATGG+AGG | + | chr8_1:75286468-75286487 | Msa1214570:intron | 40.0% |
| CCCTATCTTGGTTTACTTCA+AGG | - | chr8_1:75287012-75287031 | Msa1214560:intron | 40.0% | |
| GAAACACAAACAAAGCCTGA+AGG | - | chr8_1:75287034-75287053 | Msa1214560:intron | 40.0% | |
| !!! | GTTTGTTTTGCCAAGCAGAA+TGG | - | chr8_1:75287211-75287230 | Msa1214560:intron | 40.0% |
| ! | GCAGCTTTATGACATTATGG+TGG | - | chr8_1:75287237-75287256 | Msa1214560:intron | 40.0% |
| !!! | TTGGGGCACTAGTTTTTGAA+GGG | + | chr8_1:75287273-75287292 | Msa1214570:intron | 40.0% |
| !!! | TTTGGGGCACTAGTTTTTGA+AGG | + | chr8_1:75287274-75287293 | Msa1214570:intron | 40.0% |
| ATCCTAAAGACTTAGCTGTG+TGG | - | chr8_1:75287297-75287316 | Msa1214560:intron | 40.0% | |
| CATAACTACTAACCTAAGCC+AGG | + | chr8_1:75287449-75287468 | Msa1214570:CDS | 40.0% | |
| ! | AGAATCTCAAGACCCTTTTG+TGG | + | chr8_1:75287500-75287519 | Msa1214570:CDS | 40.0% |
| AACTTCAGAAACTTCACTGC+AGG | + | chr8_1:75287701-75287720 | Msa1214570:CDS | 40.0% | |
| !! | GCAGTGAAGTTTCTGAAGTT+TGG | - | chr8_1:75287701-75287720 | Msa1214560:three_prime_UTR | 40.0% |
| GGTTGTTTGTAAGTGGAAGA+TGG | - | chr8_1:75287723-75287742 | Msa1214560:three_prime_UTR | 40.0% | |
| !! | AGATCCTTTGGGTTTTAGTG+AGG | + | chr8_1:75288127-75288146 | None:intergenic | 40.0% |
| TCAGTTATGCAGACTCTAGA+TGG | + | chr8_1:75288371-75288390 | None:intergenic | 40.0% | |
| TATCATGATTGCACCCAACA+TGG | + | chr8_1:75288438-75288457 | None:intergenic | 40.0% | |
| AGCTCCTTATCTCATATACG+AGG | + | chr8_1:75288532-75288551 | None:intergenic | 40.0% | |
| CGTATATGAGATAAGGAGCT+TGG | - | chr8_1:75288532-75288551 | Msa1214560:intron | 40.0% | |
| GAGCTTCAAAGTTACTCTCA+AGG | + | chr8_1:75288566-75288585 | None:intergenic | 40.0% | |
| CAAAATAGATGTTCAGGGCT+GGG | + | chr8_1:75288607-75288626 | None:intergenic | 40.0% | |
| TCAAAATAGATGTTCAGGGC+TGG | + | chr8_1:75288608-75288627 | None:intergenic | 40.0% | |
| GGTCTTAATTTCCAGTTGGT+TGG | + | chr8_1:75288762-75288781 | None:intergenic | 40.0% | |
| TTGGGGTCTTAATTTCCAGT+TGG | + | chr8_1:75288766-75288785 | None:intergenic | 40.0% | |
| CTGCTACTACCTATCATTCA+TGG | + | chr8_1:75288809-75288828 | None:intergenic | 40.0% | |
| ! | GTCTAAAACAATGAGAGCCT+TGG | - | chr8_1:75288875-75288894 | Msa1214560:CDS | 40.0% |
| TCAACGATAATCACTTCTCG+TGG | + | chr8_1:75289071-75289090 | None:intergenic | 40.0% | |
| ! | ACGTTTTCATCTTGCCTAAG+AGG | - | chr8_1:75289114-75289133 | Msa1214560:CDS | 40.0% |
| AGACCTGATTATCTCAGACA+GGG | + | chr8_1:75289344-75289363 | None:intergenic | 40.0% | |
| TTGAGAACAATCATGGCTGT+TGG | + | chr8_1:75289374-75289393 | None:intergenic | 40.0% | |
| ! | ATTCTGCTGTTAGCTTCCTT+AGG | + | chr8_1:75289424-75289443 | None:intergenic | 40.0% |
| GACCCAATCCATCTTCATTA+AGG | - | chr8_1:75289499-75289518 | Msa1214560:intron | 40.0% | |
| ! | CTGAAAGGTTGATCAACTTG+AGG | + | chr8_1:75289564-75289583 | None:intergenic | 40.0% |
| ATTTGCGTACTCTTGCTGAA+AGG | + | chr8_1:75289579-75289598 | None:intergenic | 40.0% | |
| AGATCTCGTGCAAGATTGAA+CGG | - | chr8_1:75289823-75289842 | Msa1214560:CDS | 40.0% | |
| TAATAACAACACTTGGCACC+TGG | + | chr8_1:75289881-75289900 | None:intergenic | 40.0% | |
| TACGGTGAATCTTGCAAAGT+AGG | - | chr8_1:75289945-75289964 | Msa1214560:intron | 40.0% | |
| GAATATCCAACCGGAAAGTT+GGG | - | chr8_1:75289979-75289998 | Msa1214560:CDS | 40.0% | |
| ! | GAAAGTATAGGCGTGGTTAA+TGG | + | chr8_1:75290068-75290087 | None:intergenic | 40.0% |
| ! | GACTTTAGAAAGTATAGGCG+TGG | + | chr8_1:75290075-75290094 | None:intergenic | 40.0% |
| TTCTGCAAATTCTCCAACAC+AGG | - | chr8_1:75290383-75290402 | Msa1214560:intron | 40.0% | |
| TTGAGAAAGCTAAGAGTGAG+GGG | + | chr8_1:75290499-75290518 | None:intergenic | 40.0% | |
| CTTGAGAAAGCTAAGAGTGA+GGG | + | chr8_1:75290500-75290519 | None:intergenic | 40.0% | |
| TATTTCGGTTACTGTTCAGG+AGG | + | chr8_1:75290525-75290544 | None:intergenic | 40.0% | |
| AACCGCATAAGAATATTGCG+AGG | + | chr8_1:75290580-75290599 | None:intergenic | 40.0% | |
| CTCTTCTCTCTTTCCGATTT+CGG | + | chr8_1:75290617-75290636 | None:intergenic | 40.0% | |
| TCGGAAAGAGAGAAGAGAAA+CGG | - | chr8_1:75290620-75290639 | Msa1214560:intron | 40.0% | |
| GGGATTTGATGCAATCGAAA+GGG | - | chr8_1:75290690-75290709 | Msa1214560:intron | 40.0% | |
| GGATTTGATGCAATCGAAAG+GGG | - | chr8_1:75290691-75290710 | Msa1214560:intron | 40.0% | |
| ! | TCTTTTCCATGCATTTGCCA+TGG | - | chr8_1:75290871-75290890 | Msa1214560:intron | 40.0% |
| TGGATCTGTGAAATGGTTCT+AGG | - | chr8_1:75290959-75290978 | Msa1214560:CDS | 40.0% | |
| TGTTCAATCCAAACCTCCCT+GGG | - | chr8_1:75285402-75285421 | Msa1214560:three_prime_UTR | 45.0% | |
| ! | TGGTAATTTGCAACCTCGAG+TGG | - | chr8_1:75285471-75285490 | Msa1214560:three_prime_UTR | 45.0% |
| TTGGATGTAACCACGTGTGT+CGG | + | chr8_1:75285623-75285642 | Msa1214570:CDS | 45.0% | |
| ! | GGAATTCTGTAGTCTGGTTC+AGG | + | chr8_1:75285792-75285811 | Msa1214570:CDS | 45.0% |
| GTCTTATCAGGTATAGCTGG+TGG | - | chr8_1:75286102-75286121 | Msa1214560:intron | 45.0% | |
| ATCAGGTATAGCTGGTGGTT+TGG | - | chr8_1:75286107-75286126 | Msa1214560:intron | 45.0% | |
| TCTCCTTGGATTGCTTCTGT+TGG | - | chr8_1:75286167-75286186 | Msa1214560:intron | 45.0% | |
| AAAGACGAATCTCACTCTGG+TGG | + | chr8_1:75286296-75286315 | Msa1214570:intron | 45.0% | |
| !! | CGTCTTTGATGACGAGTCTT+TGG | - | chr8_1:75286309-75286328 | Msa1214560:intron | 45.0% |
| TCAGGTGAGAATGCTTTCGT+CGG | - | chr8_1:75286851-75286870 | Msa1214560:intron | 45.0% | |
| TCGTCGGTGGAAAAAATCGT+TGG | - | chr8_1:75286867-75286886 | Msa1214560:intron | 45.0% | |
| ! | AAGCTGCTTTCCATTCTGCT+TGG | + | chr8_1:75287224-75287243 | Msa1214570:intron | 45.0% |
| ! | GACATTATGGTGGAAAGAGC+CGG | - | chr8_1:75287247-75287266 | Msa1214560:intron | 45.0% |
| AGCCACACAGCTAAGTCTTT+AGG | + | chr8_1:75287302-75287321 | Msa1214570:intron | 45.0% | |
| !! | CCTACAGACATTGATTCCTG+AGG | + | chr8_1:75287329-75287348 | Msa1214570:intron | 45.0% |
| CCTCAGGAATCAATGTCTGT+AGG | - | chr8_1:75287326-75287345 | Msa1214560:intron | 45.0% | |
| CTATTTGTCTTCCGAGATCC+TGG | - | chr8_1:75287428-75287447 | Msa1214560:three_prime_UTR | 45.0% | |
| ACTAACCTAAGCCAGGATCT+CGG | + | chr8_1:75287442-75287461 | Msa1214570:CDS | 45.0% | |
| CAGGATTCCCAGGATTTCTA+TGG | + | chr8_1:75287682-75287701 | Msa1214570:CDS | 45.0% | |
| ATGGAAGCAGTTGAGATAGC+TGG | + | chr8_1:75288240-75288259 | None:intergenic | 45.0% | |
| !! | CTCGACAATTTGCTGACACT+CGG | - | chr8_1:75288296-75288315 | Msa1214560:three_prime_UTR | 45.0% |
| !! | AATTTGCTGACACTCGGTGT+TGG | - | chr8_1:75288302-75288321 | Msa1214560:three_prime_UTR | 45.0% |
| AAATGCCAACTTTGCTCCTG+TGG | - | chr8_1:75288710-75288729 | Msa1214560:intron | 45.0% | |
| ACAATGAGAGCCTTGGCATA+AGG | - | chr8_1:75288882-75288901 | Msa1214560:CDS | 45.0% | |
| CAATGAGAGCCTTGGCATAA+GGG | - | chr8_1:75288883-75288902 | Msa1214560:CDS | 45.0% | |
| AATGAGAGCCTTGGCATAAG+GGG | - | chr8_1:75288884-75288903 | Msa1214560:CDS | 45.0% | |
| TACAATGAAAGCAGACCAGC+TGG | - | chr8_1:75289209-75289228 | Msa1214560:intron | 45.0% | |
| TCTCGGCCATTCATTTGGAA+TGG | + | chr8_1:75289272-75289291 | None:intergenic | 45.0% | |
| ! | ATTGGTCTCGGCCATTCATT+TGG | + | chr8_1:75289277-75289296 | None:intergenic | 45.0% |
| GATTATCTCAGACAGGGCTA+TGG | + | chr8_1:75289338-75289357 | None:intergenic | 45.0% | |
| ! | TAGCCCTGTCTGAGATAATC+AGG | - | chr8_1:75289338-75289357 | Msa1214560:intron | 45.0% |
| CAGACCTGATTATCTCAGAC+AGG | + | chr8_1:75289345-75289364 | None:intergenic | 45.0% | |
| CAGCCATGATTGTTCTCAAC+TGG | - | chr8_1:75289375-75289394 | Msa1214560:intron | 45.0% | |
| GAGCCAGTTGAGAACAATCA+TGG | + | chr8_1:75289381-75289400 | None:intergenic | 45.0% | |
| ! | TGGATTGGGTCTGTAGCTAA+TGG | + | chr8_1:75289490-75289509 | None:intergenic | 45.0% |
| GGAATATCCAACCGGAAAGT+TGG | - | chr8_1:75289978-75289997 | Msa1214560:CDS | 45.0% | |
| ! | TTTGTTTGAGGCTGCTGCTT+CGG | + | chr8_1:75290318-75290337 | None:intergenic | 45.0% |
| ! | GGTTATGGGGTTTCGTGTTT+TGG | + | chr8_1:75290417-75290436 | None:intergenic | 45.0% |
| GTTGATGTGGGTGCTAATGT+GGG | + | chr8_1:75290461-75290480 | None:intergenic | 45.0% | |
| TGTTGATGTGGGTGCTAATG+TGG | + | chr8_1:75290462-75290481 | None:intergenic | 45.0% | |
| !! | GATGGGTTGGTTGTTGATGT+GGG | + | chr8_1:75290473-75290492 | None:intergenic | 45.0% |
| GCTTGAGAAAGCTAAGAGTG+AGG | + | chr8_1:75290501-75290520 | None:intergenic | 45.0% | |
| CGACAATAGGGTGAGATTGT+GGG | - | chr8_1:75290669-75290688 | Msa1214560:intron | 45.0% | |
| GACAATAGGGTGAGATTGTG+GGG | - | chr8_1:75290670-75290689 | Msa1214560:intron | 45.0% | |
| GGGGATTTGATGCAATCGAA+AGG | - | chr8_1:75290689-75290708 | Msa1214560:intron | 45.0% | |
| TTAGGGTTAGGGTTTGAAGG+AGG | - | chr8_1:75290755-75290774 | Msa1214560:CDS | 45.0% | |
| TTTGGGGAGAGTAAACGAGA+GGG | - | chr8_1:75290842-75290861 | Msa1214560:intron | 45.0% | |
| CATTGTCCATGGCAAATGCA+TGG | + | chr8_1:75290880-75290899 | None:intergenic | 45.0% | |
| CATGCATTTGCCATGGACAA+TGG | - | chr8_1:75290878-75290897 | Msa1214560:intron | 45.0% | |
| ACGGTGTACGGACAACAAAG+TGG | + | chr8_1:75285161-75285180 | None:intergenic | 50.0% | |
| GGAGGGAAGAAAACGGTGTA+CGG | + | chr8_1:75285173-75285192 | None:intergenic | 50.0% | |
| ! | GTGGTTGGTTGTTTCAGGGA+AGG | - | chr8_1:75285328-75285347 | Msa1214560:three_prime_UTR | 50.0% |
| GTGTTCAATCCAAACCTCCC+TGG | - | chr8_1:75285401-75285420 | Msa1214560:three_prime_UTR | 50.0% | |
| TTTAGTCTCCCAGGGAGGTT+TGG | + | chr8_1:75285413-75285432 | Msa1214570:CDS | 50.0% | |
| ! | TTCCAGGCTTTAGTCTCCCA+GGG | + | chr8_1:75285421-75285440 | Msa1214570:CDS | 50.0% |
| AGACTAAAGCCTGGAAGCCA+TGG | - | chr8_1:75285425-75285444 | Msa1214560:three_prime_UTR | 50.0% | |
| AAACGGTTTCCATGGCTTCC+AGG | + | chr8_1:75285437-75285456 | Msa1214570:CDS | 50.0% | |
| AGCAATCCAAGGAGACCAAC+AGG | + | chr8_1:75286162-75286181 | Msa1214570:intron | 50.0% | |
| GGACCAACAGAAGCAATCCA+AGG | + | chr8_1:75286173-75286192 | Msa1214570:intron | 50.0% | |
| TGGATTGCTTCTGTTGGTCC+AGG | - | chr8_1:75286173-75286192 | Msa1214560:intron | 50.0% | |
| GTGGCCAAACTTCCCTATCT+TGG | - | chr8_1:75287000-75287019 | Msa1214560:intron | 50.0% | |
| !!! | GGCACTAGTTTTTGAAGGGC+CGG | + | chr8_1:75287269-75287288 | Msa1214570:intron | 50.0% |
| AACTTCACTGCAGGATTCCC+AGG | + | chr8_1:75287692-75287711 | Msa1214570:CDS | 50.0% | |
| TGATGCACACTGCACCAAGA+AGG | + | chr8_1:75288412-75288431 | None:intergenic | 50.0% | |
| AGTGTGCATCAGTGCCATGT+TGG | - | chr8_1:75288421-75288440 | Msa1214560:three_prime_UTR | 50.0% | |
| GTGTGCATCAGTGCCATGTT+GGG | - | chr8_1:75288422-75288441 | Msa1214560:three_prime_UTR | 50.0% | |
| CGAGACTTTCTCCGTAGTGT+GGG | + | chr8_1:75288462-75288481 | None:intergenic | 50.0% | |
| TCGAGACTTTCTCCGTAGTG+TGG | + | chr8_1:75288463-75288482 | None:intergenic | 50.0% | |
| ! | GGAAGATGAGCGTTTGTTGC+AGG | + | chr8_1:75288511-75288530 | None:intergenic | 50.0% |
| GCTGGAATCACTTCATCCAG+CGG | - | chr8_1:75288648-75288667 | Msa1214560:intron | 50.0% | |
| TTCTGCCACAGGAGCAAAGT+TGG | + | chr8_1:75288718-75288737 | None:intergenic | 50.0% | |
| !! | TTTCCAGTTGGTTGGTAGGC+TGG | + | chr8_1:75288754-75288773 | None:intergenic | 50.0% |
| ATGAGAGCCTTGGCATAAGG+GGG | - | chr8_1:75288885-75288904 | Msa1214560:CDS | 50.0% | |
| TGACTCATCAAAGAGCCAGC+TGG | + | chr8_1:75289227-75289246 | None:intergenic | 50.0% | |
| ! | GCTGGCTCTTTGATGAGTCA+TGG | - | chr8_1:75289227-75289246 | Msa1214560:intron | 50.0% |
| CGTGCAAGATTGAACGGATG+TGG | - | chr8_1:75289829-75289848 | Msa1214560:CDS | 50.0% | |
| TAACAACACTTGGCACCTGG+CGG | + | chr8_1:75289878-75289897 | None:intergenic | 50.0% | |
| AATCAGCCCAACTTTCCGGT+TGG | + | chr8_1:75289988-75290007 | None:intergenic | 50.0% | |
| GGTGAATCAGCCCAACTTTC+CGG | + | chr8_1:75289992-75290011 | None:intergenic | 50.0% | |
| TTTGGCGTTTGAGCCTGTGT+TGG | + | chr8_1:75290399-75290418 | None:intergenic | 50.0% | |
| TGTGGGTGCTAATGTGGGAA+TGG | + | chr8_1:75290456-75290475 | None:intergenic | 50.0% | |
| !! | GGATGGGTTGGTTGTTGATG+TGG | + | chr8_1:75290474-75290493 | None:intergenic | 50.0% |
| CTAAGAGTGAGGGGATGGAT+GGG | + | chr8_1:75290490-75290509 | None:intergenic | 50.0% | |
| GAAAGCTAAGAGTGAGGGGA+TGG | + | chr8_1:75290495-75290514 | None:intergenic | 50.0% | |
| GCGACAATAGGGTGAGATTG+TGG | - | chr8_1:75290668-75290687 | Msa1214560:intron | 50.0% | |
| TAGGGTTTGAAGGAGGAGTG+AGG | - | chr8_1:75290762-75290781 | Msa1214560:CDS | 50.0% | |
| ! | CTTTGGGGAGAGTAAACGAG+AGG | - | chr8_1:75290841-75290860 | Msa1214560:intron | 50.0% |
| TTGCCATGGACAATGGACAG+TGG | - | chr8_1:75290885-75290904 | Msa1214560:intron | 50.0% | |
| TCACCACTGTCCATTGTCCA+TGG | + | chr8_1:75290891-75290910 | None:intergenic | 50.0% | |
| ! | GAAGAAGAAGAGCGTGTGAC+TGG | - | chr8_1:75290981-75291000 | Msa1214560:exon | 50.0% |
| ! | CTTCCAGGCTTTAGTCTCCC+AGG | + | chr8_1:75285422-75285441 | Msa1214570:CDS | 55.0% |
| !! | GTGTATGGTACCGACACACG+TGG | - | chr8_1:75285610-75285629 | Msa1214560:three_prime_UTR | 55.0% |
| CTAGTGCCTGCAGTACCTGT+TGG | - | chr8_1:75286144-75286163 | Msa1214560:intron | 55.0% | |
| ! | AGGAGACCAACAGGTACTGC+AGG | + | chr8_1:75286153-75286172 | Msa1214570:intron | 55.0% |
| ! | GCAGTACCTGTTGGTCTCCT+TGG | - | chr8_1:75286153-75286172 | Msa1214560:intron | 55.0% |
| GGCGATCAGCTCGATGAATC+AGG | - | chr8_1:75286833-75286852 | Msa1214560:intron | 55.0% | |
| GGTGAGAATGCTTTCGTCGG+TGG | - | chr8_1:75286854-75286873 | Msa1214560:intron | 55.0% | |
| GTCTTCCGAGATCCTGGCTT+AGG | - | chr8_1:75287434-75287453 | Msa1214560:three_prime_UTR | 55.0% | |
| !! | GACACTCGGTGTTGGTCAAC+TGG | - | chr8_1:75288310-75288329 | Msa1214560:three_prime_UTR | 55.0% |
| TCAAGTACGCACTGTTCCGC+TGG | + | chr8_1:75288667-75288686 | None:intergenic | 55.0% | |
| AACAGTGCGGTTTCTGCCAC+AGG | + | chr8_1:75288729-75288748 | None:intergenic | 55.0% | |
| TGGTAGGCTGGACAACAGTG+CGG | + | chr8_1:75288742-75288761 | None:intergenic | 55.0% | |
| TGTCCAGCCTACCAACCAAC+TGG | - | chr8_1:75288748-75288767 | Msa1214560:intron | 55.0% | |
| TGAGAGCCTTGGCATAAGGG+GGG | - | chr8_1:75288886-75288905 | Msa1214560:CDS | 55.0% | |
| CTCCACACAAATGGCACGCT+GGG | - | chr8_1:75289613-75289632 | Msa1214560:intron | 55.0% | |
| AGTTTCGCTGCGGCGGTTAT+GGG | + | chr8_1:75290431-75290450 | None:intergenic | 55.0% | |
| GCTAAGAGTGAGGGGATGGA+TGG | + | chr8_1:75290491-75290510 | None:intergenic | 55.0% | |
| ACGAACACCTTCAACGACGC+TGG | - | chr8_1:75290646-75290665 | Msa1214560:intron | 55.0% | |
| ATTGTCGCCAGCGTCGTTGA+AGG | + | chr8_1:75290656-75290675 | None:intergenic | 55.0% | |
| TCAACGACGCTGGCGACAAT+AGG | - | chr8_1:75290656-75290675 | Msa1214560:intron | 55.0% | |
| CAACGACGCTGGCGACAATA+GGG | - | chr8_1:75290657-75290676 | Msa1214560:intron | 55.0% | |
| ! | CAGGCTTTAGTCTCCCAGGG+AGG | + | chr8_1:75285418-75285437 | Msa1214570:CDS | 60.0% |
| CTCCCTGGGAGACTAAAGCC+TGG | - | chr8_1:75285416-75285435 | Msa1214560:three_prime_UTR | 60.0% | |
| ! | AGCTGTGTGGCTTGTGCCTC+AGG | - | chr8_1:75287310-75287329 | Msa1214560:intron | 60.0% |
| GCACTGCGACGAAGGGAAAC+AGG | + | chr8_1:75287756-75287775 | None:intergenic | 60.0% | |
| TCCCTTCGTCGCAGTGCTCT+CGG | - | chr8_1:75287759-75287778 | Msa1214560:three_prime_UTR | 60.0% | |
| !! | TCCGAGAGCACTGCGACGAA+GGG | + | chr8_1:75287763-75287782 | None:intergenic | 60.0% |
| !! | ATCCGAGAGCACTGCGACGA+AGG | + | chr8_1:75287764-75287783 | None:intergenic | 60.0% |
| ! | AGAAGCACGCGCTCTGATGC+TGG | - | chr8_1:75288630-75288649 | Msa1214560:intron | 60.0% |
| GGTGTACCCCCCTTATGCCA+AGG | + | chr8_1:75288895-75288914 | None:intergenic | 60.0% | |
| GCTCCACACAAATGGCACGC+TGG | - | chr8_1:75289612-75289631 | Msa1214560:intron | 60.0% | |
| !! | GACCCAGCGTGCCATTTGTG+TGG | + | chr8_1:75289618-75289637 | None:intergenic | 60.0% |
| ! | AATGGCGGGAAAACACCGCC+AGG | - | chr8_1:75289860-75289879 | Msa1214560:intron | 60.0% |
| ! | GCTGCTGCTTCGGATCGTCT+TGG | + | chr8_1:75290308-75290327 | None:intergenic | 60.0% |
| GTTTCGCTGCGGCGGTTATG+GGG | + | chr8_1:75290430-75290449 | None:intergenic | 60.0% | |
| GAGTTTCGCTGCGGCGGTTA+TGG | + | chr8_1:75290432-75290451 | None:intergenic | 60.0% | |
| AATGGCGAGTTTCGCTGCGG+CGG | + | chr8_1:75290438-75290457 | None:intergenic | 60.0% | |
| GGGAATGGCGAGTTTCGCTG+CGG | + | chr8_1:75290441-75290460 | None:intergenic | 60.0% | |
| GAGTGAGGGGATGGATGGGT+TGG | + | chr8_1:75290486-75290505 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 75285100 | 75291048 | 75285100 | ID=Msa1214560;Name=Msa1214560 |
| chr8_1 | mRNA | 75285100 | 75291048 | 75285100 | ID=Msa1214560-mRNA-1;Parent=Msa1214560;Name=Msa1214560-mRNA-1;_AED=0.16;_eAED=0.16;_QI=51|0.88|0.8|1|0.66|0.6|10|1901|178 |
| chr8_1 | exon | 75285100 | 75285856 | 75285100 | ID=Msa1214560-mRNA-1:exon:25888;Parent=Msa1214560-mRNA-1 |
| chr8_1 | exon | 75287379 | 75288030 | 75287379 | ID=Msa1214560-mRNA-1:exon:25887;Parent=Msa1214560-mRNA-1 |
| chr8_1 | exon | 75288053 | 75288485 | 75288053 | ID=Msa1214560-mRNA-1:exon:25886;Parent=Msa1214560-mRNA-1 |
| chr8_1 | exon | 75288786 | 75288919 | 75288786 | ID=Msa1214560-mRNA-1:exon:25885;Parent=Msa1214560-mRNA-1 |
| chr8_1 | exon | 75289064 | 75289178 | 75289064 | ID=Msa1214560-mRNA-1:exon:25884;Parent=Msa1214560-mRNA-1 |
| chr8_1 | exon | 75289257 | 75289327 | 75289257 | ID=Msa1214560-mRNA-1:exon:25883;Parent=Msa1214560-mRNA-1 |
| chr8_1 | exon | 75289818 | 75289856 | 75289818 | ID=Msa1214560-mRNA-1:exon:25882;Parent=Msa1214560-mRNA-1 |
| chr8_1 | exon | 75289954 | 75290036 | 75289954 | ID=Msa1214560-mRNA-1:exon:25881;Parent=Msa1214560-mRNA-1 |
| chr8_1 | exon | 75290696 | 75290803 | 75290696 | ID=Msa1214560-mRNA-1:exon:25880;Parent=Msa1214560-mRNA-1 |
| chr8_1 | exon | 75290952 | 75291048 | 75290952 | ID=Msa1214560-mRNA-1:exon:25879;Parent=Msa1214560-mRNA-1 |
| chr8_1 | five_prime_UTR | 75290998 | 75291048 | 75290998 | ID=Msa1214560-mRNA-1:five_prime_utr;Parent=Msa1214560-mRNA-1 |
| chr8_1 | CDS | 75290952 | 75290997 | 75290952 | ID=Msa1214560-mRNA-1:cds;Parent=Msa1214560-mRNA-1 |
| chr8_1 | CDS | 75290696 | 75290803 | 75290696 | ID=Msa1214560-mRNA-1:cds;Parent=Msa1214560-mRNA-1 |
| chr8_1 | CDS | 75289954 | 75290036 | 75289954 | ID=Msa1214560-mRNA-1:cds;Parent=Msa1214560-mRNA-1 |
| chr8_1 | CDS | 75289818 | 75289856 | 75289818 | ID=Msa1214560-mRNA-1:cds;Parent=Msa1214560-mRNA-1 |
| chr8_1 | CDS | 75289257 | 75289327 | 75289257 | ID=Msa1214560-mRNA-1:cds;Parent=Msa1214560-mRNA-1 |
| chr8_1 | CDS | 75289064 | 75289178 | 75289064 | ID=Msa1214560-mRNA-1:cds;Parent=Msa1214560-mRNA-1 |
| chr8_1 | CDS | 75288845 | 75288919 | 75288845 | ID=Msa1214560-mRNA-1:cds;Parent=Msa1214560-mRNA-1 |
| chr8_1 | three_prime_UTR | 75288786 | 75288844 | 75288786 | ID=Msa1214560-mRNA-1:three_prime_utr;Parent=Msa1214560-mRNA-1 |
| chr8_1 | three_prime_UTR | 75288053 | 75288485 | 75288053 | ID=Msa1214560-mRNA-1:three_prime_utr;Parent=Msa1214560-mRNA-1 |
| chr8_1 | three_prime_UTR | 75287379 | 75288030 | 75287379 | ID=Msa1214560-mRNA-1:three_prime_utr;Parent=Msa1214560-mRNA-1 |
| chr8_1 | three_prime_UTR | 75285100 | 75285856 | 75285100 | ID=Msa1214560-mRNA-1:three_prime_utr;Parent=Msa1214560-mRNA-1 |
| Gene Sequence |
| Protein sequence |
