Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1262290 | XP_024636561.2 | 77.570 | 214 | 12 | 1 | 1 | 178 | 27 | 240 | 1.05e-102 | 305 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1262290 | A0A396IHZ0 | 77.570 | 214 | 12 | 1 | 1 | 178 | 27 | 240 | 4.99e-103 | 305 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0382700 | Msa1262290 | 0.822791 | 1.960909e-53 | -8.615850e-47 |
| Msa1214560 | Msa1262290 | 0.988931 | 5.371786e-176 | -8.615850e-47 |
| Msa1214580 | Msa1262290 | 0.883456 | 4.418032e-71 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1262290 | MtrunA17_Chr4g0063641 | 77.570 | 214 | 12 | 1 | 1 | 178 | 27 | 240 | 9.61e-107 | 305 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 199 sgRNAs with CRISPR-Local
Find 416 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTACTCAACCTTTGTAAAT+TGG | 0.140120 | 8_2:-64954474 | Msa1262290:CDS |
| TACACAGGTTTCAATTTAAT+TGG | 0.158448 | 8_2:-64953396 | Msa1262290:three_prime_UTR |
| AGAAGGATTGATCGTAATTT+TGG | 0.167729 | 8_2:+64953073 | None:intergenic |
| CTCTTCTCTCTTTCCGATTT+CGG | 0.184156 | 8_2:+64950843 | Msa1262300:CDS |
| TGATTGAATTTGAAGGTTTA+AGG | 0.202005 | 8_2:-64950546 | Msa1262290:three_prime_UTR |
| GAGTTTCGCTGCGGCGGTTA+TGG | 0.209451 | 8_2:+64951028 | Msa1262300:CDS |
| TGATCCGAATAAATCATAAA+TGG | 0.228084 | 8_2:+64953517 | None:intergenic |
| CCTTTGTAAATTGGGAATTC+TGG | 0.228443 | 8_2:-64954465 | Msa1262290:CDS |
| CTAAGTCTTTAGGATTCTTT+TGG | 0.236913 | 8_2:+64954154 | None:intergenic |
| AGTTTCGCTGCGGCGGTTAT+GGG | 0.237903 | 8_2:+64951029 | Msa1262300:CDS |
| AATTTGCTTACAAAGATAAT+AGG | 0.239088 | 8_2:+64954370 | None:intergenic |
| TTCTTTAGCACTGCTATTAC+TGG | 0.243352 | 8_2:-64952980 | Msa1262290:three_prime_UTR |
| GCAGTGAAGTTTCTGAAGTT+TGG | 0.243656 | 8_2:-64953742 | Msa1262290:three_prime_UTR |
| GGTTATGGGGTTTCGTGTTT+TGG | 0.251162 | 8_2:+64951043 | Msa1262300:CDS |
| GCCAGTAATTTACTTTATAC+TGG | 0.256359 | 8_2:-64953562 | Msa1262290:three_prime_UTR |
| CGTCTTTGATGACGAGTCTT+TGG | 0.261701 | 8_2:-64955134 | Msa1262290:intron |
| TTGATCTTTGATAACCAATA+TGG | 0.266214 | 8_2:+64953451 | None:intergenic |
| AATATTGTGAGGTTGCTTAA+AGG | 0.266563 | 8_2:+64950891 | Msa1262300:CDS |
| TGATTCTTGTGTAGATCCTT+TGG | 0.277997 | 8_2:+64953329 | None:intergenic |
| GAAGGTTTAAGGTTTAATTT+AGG | 0.279702 | 8_2:-64950535 | Msa1262290:three_prime_UTR |
| TGATATTTCGGTTACTGTTC+AGG | 0.293998 | 8_2:+64950932 | Msa1262300:CDS |
| ATATTCTTATGCGGTTTATC+AGG | 0.302785 | 8_2:-64950873 | Msa1262290:three_prime_UTR |
| GTGGCCAAACTTCCCTATCT+TGG | 0.304002 | 8_2:-64954443 | Msa1262290:CDS |
| TGGATCTGTGAAATGGTTCT+AGG | 0.307654 | 8_2:-64950498 | Msa1262290:three_prime_UTR |
| CAGGATTCCCAGGATTTCTA+TGG | 0.308076 | 8_2:+64953764 | None:intergenic |
| AAATTACGATCAATCCTTCT+TGG | 0.309641 | 8_2:-64953070 | Msa1262290:three_prime_UTR |
| ATCAGGTAAGTTTCCGAAAT+CGG | 0.318319 | 8_2:-64950856 | Msa1262290:three_prime_UTR |
| CCCTATCTTGGTTTACTTCA+AGG | 0.319304 | 8_2:-64954431 | Msa1262290:CDS |
| CAGTGAAGTTTCTGAAGTTT+GGG | 0.322476 | 8_2:-64953741 | Msa1262290:three_prime_UTR |
| TTGAAAAGCTATTTCTTCAT+TGG | 0.325740 | 8_2:-64952782 | Msa1262290:three_prime_UTR |
| AAGAAATGAATTTGTCCTTC+AGG | 0.326232 | 8_2:+64954394 | None:intergenic |
| GGAAGATGAGCGTTTGTTGC+AGG | 0.326266 | 8_2:+64952957 | Msa1262300:CDS |
| GCAGTACCTGTTGGTCTCCT+TGG | 0.326511 | 8_2:-64955290 | Msa1262290:CDS |
| AAACGGTTTCCATGGCTTCC+AGG | 0.328674 | 8_2:+64956014 | None:intergenic |
| TCAATTTAATTGGAAACTTA+AGG | 0.329224 | 8_2:-64953386 | Msa1262290:three_prime_UTR |
| GACACTCGGTGTTGGTCAAC+TGG | 0.332988 | 8_2:-64953155 | Msa1262290:three_prime_UTR |
| AAAGCAGCTTTATGACATTA+TGG | 0.336753 | 8_2:-64954209 | Msa1262290:CDS |
| TCAACGACGCTGGCGACAAT+AGG | 0.337227 | 8_2:-64950801 | Msa1262290:three_prime_UTR |
| TTTAGGTGAGAATTGAGATT+TGG | 0.337827 | 8_2:-64950518 | Msa1262290:three_prime_UTR |
| TCTGCTCAAAATAGATGTTC+AGG | 0.339107 | 8_2:+64952855 | Msa1262300:CDS |
| GTACCCATTTATGATTTATT+CGG | 0.340238 | 8_2:-64953521 | Msa1262290:three_prime_UTR |
| GTTTCAGGGAAGGAAAATAT+TGG | 0.346413 | 8_2:-64956110 | Msa1262290:intron |
| AGCTGTGTGGCTTGTGCCTC+AGG | 0.348494 | 8_2:-64954133 | Msa1262290:three_prime_UTR |
| GATTCTTGTGTAGATCCTTT+GGG | 0.363229 | 8_2:+64953330 | None:intergenic |
| ATATTGTGAGGTTGCTTAAA+GGG | 0.363398 | 8_2:+64950892 | Msa1262300:CDS |
| TCCAGTATAAAGTAAATTAC+TGG | 0.364616 | 8_2:+64953561 | None:intergenic |
| TCCTTGAAGTAAACCAAGAT+AGG | 0.368227 | 8_2:+64954430 | None:intergenic |
| GTACTCAACCTTTGTAAATT+GGG | 0.369511 | 8_2:-64954473 | Msa1262290:CDS |
| AGCCACACAGCTAAGTCTTT+AGG | 0.370742 | 8_2:+64954144 | None:intergenic |
| TGAAGTATAAGAAGAGTAAG+AGG | 0.371661 | 8_2:-64950668 | Msa1262290:three_prime_UTR |
| TTTCCAGTTGGTTGGTAGGC+TGG | 0.378417 | 8_2:+64952714 | Msa1262300:intron |
| GGATGGGTTGGTTGTTGATG+TGG | 0.379859 | 8_2:+64950986 | Msa1262300:CDS |
| ATCAGGTATAGCTGGTGGTT+TGG | 0.381511 | 8_2:-64955336 | Msa1262290:intron |
| ATTTGCTTACAAAGATAATA+GGG | 0.382490 | 8_2:+64954371 | None:intergenic |
| TTTAGTCTCCCAGGGAGGTT+TGG | 0.382719 | 8_2:+64956038 | None:intergenic |
| GATTGAGTTAGAGAAGAAGT+TGG | 0.386192 | 8_2:-64950742 | Msa1262290:three_prime_UTR |
| TGTTTGTTTGAACTCCATAT+TGG | 0.386713 | 8_2:-64953465 | Msa1262290:three_prime_UTR |
| TTTGTTTGAGGCTGCTGCTT+CGG | 0.390574 | 8_2:+64951142 | Msa1262300:CDS |
| AAGGTGATGAAATTAGGGTT+AGG | 0.392061 | 8_2:-64950714 | Msa1262290:three_prime_UTR |
| AAATTAGGGTTAGGGTTTGA+AGG | 0.397564 | 8_2:-64950705 | Msa1262290:three_prime_UTR |
| TCCCTTCGTCGCAGTGCTCT+CGG | 0.401351 | 8_2:-64953684 | Msa1262290:three_prime_UTR |
| TAAACCAAGATAGGGAAGTT+TGG | 0.401574 | 8_2:+64954439 | None:intergenic |
| TGAACAGTAACCGAAATATC+AGG | 0.412579 | 8_2:-64950930 | Msa1262290:three_prime_UTR |
| TGTTGATGTGGGTGCTAATG+TGG | 0.415117 | 8_2:+64950998 | Msa1262300:CDS |
| GCACTGCGACGAAGGGAAAC+AGG | 0.418874 | 8_2:+64953690 | None:intergenic |
| GATGGGTTGGTTGTTGATGT+GGG | 0.421349 | 8_2:+64950987 | Msa1262300:CDS |
| TGGATTGCTTCTGTTGGTCC+AGG | 0.427331 | 8_2:-64955270 | Msa1262290:intron |
| AGGTGATGAAATTAGGGTTA+GGG | 0.429375 | 8_2:-64950713 | Msa1262290:three_prime_UTR |
| ATCCGAGAGCACTGCGACGA+AGG | 0.430702 | 8_2:+64953682 | None:intergenic |
| GTGATTTAGGAGGTAAAGAT+AGG | 0.432339 | 8_2:-64954631 | Msa1262290:intron |
| TCTGTAGGCAGTAATTGTTT+TGG | 0.436565 | 8_2:-64954102 | Msa1262290:intron |
| GAAATTTAATGCATGTTGAA+TGG | 0.438446 | 8_2:-64953303 | Msa1262290:three_prime_UTR |
| TACAACTTATTTCTTTGAGC+TGG | 0.440973 | 8_2:-64953584 | Msa1262290:three_prime_UTR |
| AACTTCACTGCAGGATTCCC+AGG | 0.441662 | 8_2:+64953754 | None:intergenic |
| TCAGTTATGCAGACTCTAGA+TGG | 0.442742 | 8_2:+64953097 | None:intergenic |
| AATATGGAGTTCAAACAAAC+AGG | 0.443310 | 8_2:+64953467 | None:intergenic |
| GGCGATCAGCTCGATGAATC+AGG | 0.445301 | 8_2:-64954610 | Msa1262290:CDS |
| CAACGACGCTGGCGACAATA+GGG | 0.447619 | 8_2:-64950800 | Msa1262290:three_prime_UTR |
| AGAAGCACGCGCTCTGATGC+TGG | 0.454756 | 8_2:-64952835 | Msa1262290:three_prime_UTR |
| CGACAATAGGGTGAGATTGT+GGG | 0.455532 | 8_2:-64950788 | Msa1262290:three_prime_UTR |
| ATTGTCGCCAGCGTCGTTGA+AGG | 0.456958 | 8_2:+64950804 | Msa1262300:CDS |
| GCTAAGAGTGAGGGGATGGA+TGG | 0.464274 | 8_2:+64950969 | Msa1262300:CDS |
| CAAAATAGATGTTCAGGGCT+GGG | 0.467724 | 8_2:+64952861 | Msa1262300:CDS |
| TTAATTTCCAGTTGGTTGGT+AGG | 0.469103 | 8_2:+64952710 | Msa1262300:intron |
| GAAGAAGAAGAGCGTGTGAC+TGG | 0.469541 | 8_2:-64950476 | Msa1262290:three_prime_UTR |
| CTTCCAGGCTTTAGTCTCCC+AGG | 0.470306 | 8_2:+64956029 | None:intergenic |
| GATCCGAATAAATCATAAAT+GGG | 0.472887 | 8_2:+64953518 | None:intergenic |
| TCAAGTACGCACTGTTCCGC+TGG | 0.473487 | 8_2:+64952801 | Msa1262300:CDS |
| AACAGTGCGGTTTCTGCCAC+AGG | 0.474196 | 8_2:+64952739 | Msa1262300:CDS |
| CATGCATTTGCCATGGACAA+TGG | 0.478447 | 8_2:-64950579 | Msa1262290:three_prime_UTR |
| TTCTGCCACAGGAGCAAAGT+TGG | 0.478586 | 8_2:+64952750 | Msa1262300:CDS |
| GTGTGCATCAGTGCCATGTT+GGG | 0.483129 | 8_2:-64953043 | Msa1262290:three_prime_UTR |
| AGCAATCCAAGGAGACCAAC+AGG | 0.484363 | 8_2:+64955284 | None:intergenic |
| TCTCCTTGGATTGCTTCTGT+TGG | 0.484521 | 8_2:-64955276 | Msa1262290:CDS |
| TCAAAATAGATGTTCAGGGC+TGG | 0.486002 | 8_2:+64952860 | Msa1262300:CDS |
| AACTTCAGAAACTTCACTGC+AGG | 0.486411 | 8_2:+64953745 | None:intergenic |
| TGTCCAGCCTACCAACCAAC+TGG | 0.492010 | 8_2:-64952717 | Msa1262290:intron |
| ATTCTGAATGTCTGATACAC+AGG | 0.492217 | 8_2:-64953411 | Msa1262290:three_prime_UTR |
| GACATTATGGTGGAAAGAGC+CGG | 0.492897 | 8_2:-64954196 | Msa1262290:CDS |
| GTGTTCAATCCAAACCTCCC+TGG | 0.492985 | 8_2:-64956047 | Msa1262290:CDS |
| GAAAATATTGGATGTTTGAG+TGG | 0.495198 | 8_2:-64956098 | Msa1262290:CDS |
| TAACAACAAAACGGTTTCCA+TGG | 0.495913 | 8_2:+64956006 | None:intergenic |
| TGAGATTTGGATCTGTGAAA+TGG | 0.496512 | 8_2:-64950505 | Msa1262290:three_prime_UTR |
| GGATTTGGTTACTTTGTTTG+AGG | 0.498554 | 8_2:+64951130 | Msa1262300:CDS |
| GCGACAATAGGGTGAGATTG+TGG | 0.498962 | 8_2:-64950789 | Msa1262290:three_prime_UTR |
| GAAAGCTAAGAGTGAGGGGA+TGG | 0.499446 | 8_2:+64950965 | Msa1262300:CDS |
| AAGTTTGGGTTGTTTGTAAG+TGG | 0.502291 | 8_2:-64953727 | Msa1262290:three_prime_UTR |
| TTCAAAGTTACTCTCAAGGA+AGG | 0.504924 | 8_2:+64952906 | Msa1262300:CDS |
| AGACTAAAGCCTGGAAGCCA+TGG | 0.505512 | 8_2:-64956023 | Msa1262290:CDS |
| TAGGGTTTGAAGGAGGAGTG+AGG | 0.507910 | 8_2:-64950695 | Msa1262290:three_prime_UTR |
| GCAAATTTGCTTACTTTGGG+AGG | 0.509518 | 8_2:+64956260 | None:intergenic |
| TTCCAGGCTTTAGTCTCCCA+GGG | 0.513117 | 8_2:+64956030 | None:intergenic |
| GGTCTTAATTTCCAGTTGGT+TGG | 0.514715 | 8_2:+64952706 | Msa1262300:intron |
| CTCGGCAATTTGCTGACACT+CGG | 0.514888 | 8_2:-64953169 | Msa1262290:three_prime_UTR |
| GTTGATGTGGGTGCTAATGT+GGG | 0.518850 | 8_2:+64950999 | Msa1262300:CDS |
| TCATCGAATTGTTCACTGCT+CGG | 0.520334 | 8_2:-64953187 | Msa1262290:three_prime_UTR |
| ATTGTCTTATCAGGTATAGC+TGG | 0.522775 | 8_2:-64955344 | Msa1262290:intron |
| GAGTGAGGGGATGGATGGGT+TGG | 0.523266 | 8_2:+64950974 | Msa1262300:CDS |
| CCTTGAAGTAAACCAAGATA+GGG | 0.523974 | 8_2:+64954431 | None:intergenic |
| TCCGAGAGCACTGCGACGAA+GGG | 0.524338 | 8_2:+64953683 | None:intergenic |
| TCTTCCTCGTATATGAGATA+AGG | 0.525577 | 8_2:-64952940 | Msa1262290:three_prime_UTR |
| CGTATATGAGATAAGGAGCT+TGG | 0.527326 | 8_2:-64952933 | Msa1262290:three_prime_UTR |
| TGTTCAATCCAAACCTCCCT+GGG | 0.527680 | 8_2:-64956046 | Msa1262290:CDS |
| ATGGAAGCAGTTGAGATAGC+TGG | 0.528507 | 8_2:+64953228 | None:intergenic |
| TTAGGGTTAGGGTTTGAAGG+AGG | 0.530643 | 8_2:-64950702 | Msa1262290:three_prime_UTR |
| GGGATTTGATGCAATCGAAA+GGG | 0.531578 | 8_2:-64950767 | Msa1262290:three_prime_UTR |
| CTCCCTGGGAGACTAAAGCC+TGG | 0.533056 | 8_2:-64956032 | Msa1262290:CDS |
| CTGCTCAAAATAGATGTTCA+GGG | 0.535597 | 8_2:+64952856 | Msa1262300:CDS |
| AAATGCCAACTTTGCTCCTG+TGG | 0.539271 | 8_2:-64952755 | Msa1262290:three_prime_UTR |
| GCTGCTGCTTCGGATCGTCT+TGG | 0.540456 | 8_2:+64951152 | Msa1262300:CDS |
| TCGGAAAGAGAGAAGAGAAA+CGG | 0.541737 | 8_2:-64950837 | Msa1262290:three_prime_UTR |
| CTAAGAGTGAGGGGATGGAT+GGG | 0.542239 | 8_2:+64950970 | Msa1262300:CDS |
| CTAGTGCCTGCAGTACCTGT+TGG | 0.544253 | 8_2:-64955299 | Msa1262290:CDS |
| AGTGTGCATCAGTGCCATGT+TGG | 0.544799 | 8_2:-64953044 | Msa1262290:three_prime_UTR |
| GGTTGTTTGTAAGTGGAAGA+TGG | 0.547404 | 8_2:-64953720 | Msa1262290:three_prime_UTR |
| TTCTGCAAATTCTCCAACAC+AGG | 0.549660 | 8_2:-64951074 | Msa1262290:three_prime_UTR |
| TCGAGACTTTCTCCGTAGTG+TGG | 0.549802 | 8_2:+64953005 | Msa1262300:CDS |
| CGAGACTTTCTCCGTAGTGT+GGG | 0.555020 | 8_2:+64953006 | Msa1262300:CDS |
| ACGAACACCTTCAACGACGC+TGG | 0.556633 | 8_2:-64950811 | Msa1262290:three_prime_UTR |
| GGAGGGAAGAAAACGGTGTA+CGG | 0.558028 | 8_2:+64956278 | None:intergenic |
| AGGAGACCAACAGGTACTGC+AGG | 0.559075 | 8_2:+64955293 | None:intergenic |
| GTCTTATCAGGTATAGCTGG+TGG | 0.560370 | 8_2:-64955341 | Msa1262290:intron |
| TTTGAAACCATAGAAATCCT+GGG | 0.562996 | 8_2:-64953771 | Msa1262290:three_prime_UTR |
| GTTTCGCTGCGGCGGTTATG+GGG | 0.563793 | 8_2:+64951030 | Msa1262300:CDS |
| CAAATTTGCTTACTTTGGGA+GGG | 0.566767 | 8_2:+64956261 | None:intergenic |
| ATTTGCAGAAGTTATGTGAA+GGG | 0.566967 | 8_2:+64951087 | Msa1262300:CDS |
| GTGGTGATGATTGAATTTGA+AGG | 0.567093 | 8_2:-64950553 | Msa1262290:three_prime_UTR |
| GGTGAGAATGCTTTCGTCGG+TGG | 0.567378 | 8_2:-64954589 | Msa1262290:CDS |
| TTGTAAATTGGGAATTCTGG+TGG | 0.569408 | 8_2:-64954462 | Msa1262290:CDS |
| ATGATTTATTCGGATCATGT+TGG | 0.570357 | 8_2:-64953511 | Msa1262290:three_prime_UTR |
| TTTGGCGTTTGAGCCTGTGT+TGG | 0.573077 | 8_2:+64951061 | Msa1262300:CDS |
| GAGCTTCAAAGTTACTCTCA+AGG | 0.573311 | 8_2:+64952902 | Msa1262300:CDS |
| GGAAAGTGTTGATTCAAACT+AGG | 0.574065 | 8_2:-64953134 | Msa1262290:three_prime_UTR |
| ACAATTCGATGAATTGATTG+TGG | 0.575337 | 8_2:+64953198 | None:intergenic |
| GACAATAGGGTGAGATTGTG+GGG | 0.577496 | 8_2:-64950787 | Msa1262290:three_prime_UTR |
| AATTTGCTGACACTCGGTGT+TGG | 0.577793 | 8_2:-64953163 | Msa1262290:three_prime_UTR |
| TACTTTGGGAGGGAAGAAAA+CGG | 0.579768 | 8_2:+64956271 | None:intergenic |
| CTTGAGAAAGCTAAGAGTGA+GGG | 0.582466 | 8_2:+64950960 | Msa1262300:CDS |
| TTGTTCCACCACACAAAACA+AGG | 0.582560 | 8_2:-64956346 | None:intergenic |
| TCACCACTGTCCATTGTCCA+TGG | 0.585827 | 8_2:+64950569 | None:intergenic |
| TTTGCAGAAGTTATGTGAAG+GGG | 0.586435 | 8_2:+64951088 | Msa1262300:CDS |
| CCAGAATTCCCAATTTACAA+AGG | 0.587587 | 8_2:+64954465 | None:intergenic |
| ATCAAAGACGAATCTCACTC+TGG | 0.595757 | 8_2:+64955147 | None:intergenic |
| TGATGCACACTGCACCAAGA+AGG | 0.595813 | 8_2:+64953056 | Msa1262300:CDS |
| GGGGATTTGATGCAATCGAA+AGG | 0.598736 | 8_2:-64950768 | Msa1262290:three_prime_UTR |
| AATTTGCAGAAGTTATGTGA+AGG | 0.603276 | 8_2:+64951086 | Msa1262300:CDS |
| TATCATGATTGCACCCAACA+TGG | 0.604242 | 8_2:+64953030 | Msa1262300:CDS |
| AATGGCGAGTTTCGCTGCGG+CGG | 0.605541 | 8_2:+64951022 | Msa1262300:CDS |
| CCTCAGGAATCAATGTCTGT+AGG | 0.607400 | 8_2:-64954117 | Msa1262290:three_prime_UTR |
| AACCTCACAATATTCTTATG+CGG | 0.609530 | 8_2:-64950882 | Msa1262290:three_prime_UTR |
| TGTGGGTGCTAATGTGGGAA+TGG | 0.612050 | 8_2:+64951004 | Msa1262300:CDS |
| TGGGAATATCATGTTCTCAA+AGG | 0.613591 | 8_2:+64952880 | Msa1262300:CDS |
| GCTTGAGAAAGCTAAGAGTG+AGG | 0.622574 | 8_2:+64950959 | Msa1262300:CDS |
| GCAGCTTTATGACATTATGG+TGG | 0.623832 | 8_2:-64954206 | Msa1262290:CDS |
| TCAAAGTTACTCTCAAGGAA+GGG | 0.627168 | 8_2:+64952907 | Msa1262300:CDS |
| CATTGTCCATGGCAAATGCA+TGG | 0.628684 | 8_2:+64950580 | None:intergenic |
| TATTTCGGTTACTGTTCAGG+AGG | 0.635656 | 8_2:+64950935 | Msa1262300:CDS |
| TCAGGTGAGAATGCTTTCGT+CGG | 0.636439 | 8_2:-64954592 | Msa1262290:CDS |
| GAAACACAAACAAAGCCTGA+AGG | 0.642420 | 8_2:-64954409 | Msa1262290:CDS |
| CAGGCTTTAGTCTCCCAGGG+AGG | 0.642684 | 8_2:+64956033 | None:intergenic |
| AATTGATTGTGGATAGACGA+TGG | 0.653180 | 8_2:+64953209 | None:intergenic |
| GGATTTGATGCAATCGAAAG+GGG | 0.653814 | 8_2:-64950766 | Msa1262290:three_prime_UTR |
| GGTTTCAAGAAATCATTGTG+TGG | 0.660479 | 8_2:-64956077 | Msa1262290:CDS |
| CTTTGGGGAGAGTAAACGAG+AGG | 0.661821 | 8_2:-64950616 | Msa1262290:three_prime_UTR |
| AATCATGATAACCCACACTA+CGG | 0.665119 | 8_2:-64953017 | Msa1262290:three_prime_UTR |
| GGACCAACAGAAGCAATCCA+AGG | 0.668183 | 8_2:+64955273 | None:intergenic |
| ACGGTGTACGGACAACAAAG+TGG | 0.669333 | 8_2:+64956290 | None:intergenic |
| GCTGGAATCACTTCATCCAG+CGG | 0.669971 | 8_2:-64952817 | Msa1262290:three_prime_UTR |
| TTGAGAAAGCTAAGAGTGAG+GGG | 0.670921 | 8_2:+64950961 | Msa1262300:CDS |
| AAAACCTCACTAAAACCCAA+AGG | 0.674003 | 8_2:-64953345 | Msa1262290:three_prime_UTR |
| AAAGACGAATCTCACTCTGG+TGG | 0.674566 | 8_2:+64955150 | None:intergenic |
| TTTGGGGAGAGTAAACGAGA+GGG | 0.678894 | 8_2:-64950615 | Msa1262290:three_prime_UTR |
| ATCCTAAAGACTTAGCTGTG+TGG | 0.686936 | 8_2:-64954146 | Msa1262290:exon |
| TGGTAGGCTGGACAACAGTG+CGG | 0.687351 | 8_2:+64952726 | Msa1262300:CDS |
| AGCTCCTTATCTCATATACG+AGG | 0.689074 | 8_2:+64952936 | Msa1262300:CDS |
| CCTACAGACATTGATTCCTG+AGG | 0.697530 | 8_2:+64954117 | None:intergenic |
| AACCGCATAAGAATATTGTG+AGG | 0.700087 | 8_2:+64950880 | Msa1262300:CDS |
| GGGAATGGCGAGTTTCGCTG+CGG | 0.716846 | 8_2:+64951019 | Msa1262300:CDS |
| TTGCCATGGACAATGGACAG+TGG | 0.758874 | 8_2:-64950572 | Msa1262290:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTTTTTAGAAAAATAAATGA+TGG | + | chr8_2:64951731-64951750 | Msa1262300:intron | 15.0% |
| !! | TAATACAAAACACATTATAA+TGG | + | chr8_2:64952073-64952092 | Msa1262300:intron | 15.0% |
| !! | AAAATATGTTTATATGATGT+AGG | - | chr8_2:64952269-64952288 | Msa1262290:intron | 15.0% |
| !! | GTAAAGTAAATATACAAAAT+AGG | - | chr8_2:64952426-64952445 | Msa1262290:intron | 15.0% |
| !! | GTATGTTTATTTAAATGAAA+TGG | + | chr8_2:64954223-64954242 | None:intergenic | 15.0% |
| !! | GAATACAATATATAAATTAG+TGG | + | chr8_2:64954966-64954985 | None:intergenic | 15.0% |
| !! | TTGTATGTGAATAATATAAT+TGG | + | chr8_2:64955098-64955117 | None:intergenic | 15.0% |
| !!! | CACTTTTTTATATTAGTTGT+TGG | - | chr8_2:64950613-64950632 | Msa1262290:three_prime_UTR | 20.0% |
| !! | TTTATTAATCTGCTTATACA+AGG | + | chr8_2:64951375-64951394 | Msa1262300:intron | 20.0% |
| !! | AGATTAATAAACATCCTAAA+AGG | - | chr8_2:64951384-64951403 | Msa1262290:intron | 20.0% |
| !! | ATAATTAGAGAAAAAACACT+TGG | + | chr8_2:64951574-64951593 | Msa1262300:intron | 20.0% |
| !! | CATATTTATTATGACTAGAA+GGG | + | chr8_2:64951753-64951772 | Msa1262300:intron | 20.0% |
| !! | TCATATTTATTATGACTAGA+AGG | + | chr8_2:64951754-64951773 | Msa1262300:intron | 20.0% |
| !! | ATTTGCTTACAAAGATAATA+GGG | + | chr8_2:64952396-64952415 | Msa1262300:intron | 20.0% |
| !!! | AATTTGCTTACAAAGATAAT+AGG | + | chr8_2:64952397-64952416 | Msa1262300:intron | 20.0% |
| !!! | TTTTGTGGTACAAAAATTAA+GGG | + | chr8_2:64952806-64952825 | Msa1262300:CDS | 20.0% |
| !!! | TTAATTTTTGTACCACAAAA+GGG | - | chr8_2:64952806-64952825 | Msa1262290:three_prime_UTR | 20.0% |
| !! | TCAATTTAATTGGAAACTTA+AGG | - | chr8_2:64953378-64953397 | Msa1262290:three_prime_UTR | 20.0% |
| !!! | ATGTTTTTATTTTCTCTTTG+GGG | + | chr8_2:64954082-64954101 | None:intergenic | 20.0% |
| !!! | GATGTTTTTATTTTCTCTTT+GGG | + | chr8_2:64954083-64954102 | None:intergenic | 20.0% |
| !!! | TGATGTTTTTATTTTCTCTT+TGG | + | chr8_2:64954084-64954103 | None:intergenic | 20.0% |
| !!! | TTTTAGACATGAAAAGTAAA+TGG | + | chr8_2:64954162-64954181 | None:intergenic | 20.0% |
| !! | ATTTAAATGAAATGGTTATG+AGG | + | chr8_2:64954215-64954234 | None:intergenic | 20.0% |
| !!! | AACCAAAAATAGAACAATTT+TGG | - | chr8_2:64954289-64954308 | Msa1262290:intron | 20.0% |
| !!! | AACCAAAATTGTTCTATTTT+TGG | + | chr8_2:64954294-64954313 | None:intergenic | 20.0% |
| !!! | ACCTTATCTAAAATAAACTA+AGG | - | chr8_2:64955003-64955022 | Msa1262290:intron | 20.0% |
| !!! | TCCTTAGTTTATTTTAGATA+AGG | + | chr8_2:64955007-64955026 | None:intergenic | 20.0% |
| !! | TGTGAATAATATAATTGGTT+AGG | + | chr8_2:64955093-64955112 | None:intergenic | 20.0% |
| !!! | ATTTTGGTTCATATAGTTTA+TGG | + | chr8_2:64955512-64955531 | None:intergenic | 20.0% |
| !!! | TTTTTAAGGTGATGAAATTA+GGG | - | chr8_2:64956045-64956064 | Msa1262290:CDS | 20.0% |
| !! | TTTTGTGTATCAGAAACAAA+TGG | - | chr8_2:64950448-64950467 | Msa1262290:three_prime_UTR | 25.0% |
| !!! | TGGCTCTATGTTTTTTTTTA+TGG | - | chr8_2:64950807-64950826 | Msa1262290:three_prime_UTR | 25.0% |
| ! | TGGTTACATCCAATTATTAT+AGG | - | chr8_2:64950951-64950970 | Msa1262290:three_prime_UTR | 25.0% |
| ! | ATATCGACACCTATAATAAT+TGG | + | chr8_2:64950963-64950982 | Msa1262300:CDS | 25.0% |
| !!! | AATTATTATAGGTGTCGATA+TGG | - | chr8_2:64950962-64950981 | Msa1262290:three_prime_UTR | 25.0% |
| !! | TTCTCTTTTCGCATAATTTT+AGG | - | chr8_2:64951158-64951177 | Msa1262290:three_prime_UTR | 25.0% |
| ! | AGGCGTACTATAATATAATT+TGG | - | chr8_2:64951178-64951197 | Msa1262290:intron | 25.0% |
| !! | ATCTATTGCCTTAATTTTGT+TGG | - | chr8_2:64951265-64951284 | Msa1262290:intron | 25.0% |
| !! | TCTATTGCCTTAATTTTGTT+GGG | - | chr8_2:64951266-64951285 | Msa1262290:intron | 25.0% |
| ! | TGACTTATAATTGTCTTATC+AGG | - | chr8_2:64951411-64951430 | Msa1262290:intron | 25.0% |
| !! | TTCTTCTATTGATAATTACC+TGG | + | chr8_2:64951515-64951534 | Msa1262300:intron | 25.0% |
| ! | GAAGAAACTGTAATTAAGAA+AGG | - | chr8_2:64951529-64951548 | Msa1262290:intron | 25.0% |
| !!! | TATTTGCTTTTTATTTTCGC+AGG | - | chr8_2:64951591-64951610 | Msa1262290:intron | 25.0% |
| ! | TTGGAAAGAAAATACTACTA+TGG | + | chr8_2:64951697-64951716 | Msa1262300:intron | 25.0% |
| ! | TGAACTTATGCAATATTAGA+AGG | + | chr8_2:64951860-64951879 | Msa1262300:intron | 25.0% |
| ! | CTGAAAAATTGGATGATTAT+TGG | + | chr8_2:64951996-64952015 | Msa1262300:intron | 25.0% |
| ! | TAGAATGGTAACTGAAAAAT+TGG | + | chr8_2:64952007-64952026 | Msa1262300:intron | 25.0% |
| ! | TTACATGCAAAATGTGATTT+AGG | - | chr8_2:64952120-64952139 | Msa1262290:intron | 25.0% |
| ! | GTCAATGTTGAAACAAAAAT+AGG | + | chr8_2:64952224-64952243 | Msa1262300:intron | 25.0% |
| !!! | TAAGTCTTTAGGATTCTTTT+GGG | + | chr8_2:64952612-64952631 | Msa1262300:intron | 25.0% |
| !! | CTTTTGTGGTACAAAAATTA+AGG | + | chr8_2:64952807-64952826 | Msa1262300:CDS | 25.0% |
| !! | CTTAATTTTTGTACCACAAA+AGG | - | chr8_2:64952805-64952824 | Msa1262290:three_prime_UTR | 25.0% |
| ! | TGATACAATACCAATGATAT+AGG | + | chr8_2:64952902-64952921 | Msa1262300:CDS | 25.0% |
| ! | TCCAGTATAAAGTAAATTAC+TGG | + | chr8_2:64953206-64953225 | None:intergenic | 25.0% |
| ! | GTACCCATTTATGATTTATT+CGG | - | chr8_2:64953243-64953262 | Msa1262290:three_prime_UTR | 25.0% |
| ! | GATCCGAATAAATCATAAAT+GGG | + | chr8_2:64953249-64953268 | None:intergenic | 25.0% |
| ! | TGATCCGAATAAATCATAAA+TGG | + | chr8_2:64953250-64953269 | None:intergenic | 25.0% |
| !! | TTGATCTTTGATAACCAATA+TGG | + | chr8_2:64953316-64953335 | None:intergenic | 25.0% |
| ! | TACACAGGTTTCAATTTAAT+TGG | - | chr8_2:64953368-64953387 | Msa1262290:three_prime_UTR | 25.0% |
| ! | GAAATTTAATGCATGTTGAA+TGG | - | chr8_2:64953461-64953480 | Msa1262290:three_prime_UTR | 25.0% |
| !!! | TTGAAAAGCTATTTCTTCAT+TGG | - | chr8_2:64953982-64954001 | Msa1262290:intron | 25.0% |
| ! | AACATACACATTCATTGAAT+CGG | - | chr8_2:64954236-64954255 | Msa1262290:intron | 25.0% |
| ! | ACGAATTTATACGCATTAAT+TGG | + | chr8_2:64954594-64954613 | None:intergenic | 25.0% |
| !! | AATTCGTATATTTGTTAACC+AGG | - | chr8_2:64954607-64954626 | Msa1262290:CDS | 25.0% |
| !! | ATTCGTATATTTGTTAACCA+GGG | - | chr8_2:64954608-64954627 | Msa1262290:CDS | 25.0% |
| !! | GAGTTTTTACTTTCTTAGTT+AGG | + | chr8_2:64954751-64954770 | None:intergenic | 25.0% |
| ! | AGTAAAAACTCATAAAGACA+TGG | - | chr8_2:64954760-64954779 | Msa1262290:intron | 25.0% |
| ! | AAGTTATTAAGATGCTAAGT+AGG | + | chr8_2:64954943-64954962 | None:intergenic | 25.0% |
| ! | TTTATGCTAATAACAACACT+TGG | + | chr8_2:64955187-64955206 | None:intergenic | 25.0% |
| ! | AATAGATAGATAGCATTCTA+CGG | - | chr8_2:64955226-64955245 | Msa1262290:intron | 25.0% |
| !!! | CTTGATTCTCTAAAATTTGA+AGG | + | chr8_2:64955312-64955331 | None:intergenic | 25.0% |
| !!! | CTTCAAATTTTAGAGAATCA+AGG | - | chr8_2:64955310-64955329 | Msa1262290:CDS | 25.0% |
| !! | GTTTAGACTTTAGAAAGTAT+AGG | + | chr8_2:64955379-64955398 | None:intergenic | 25.0% |
| !! | GCTTGAATTGAATTGAATTT+TGG | + | chr8_2:64955528-64955547 | None:intergenic | 25.0% |
| ! | AAGAAATCTAACCTTATGAA+CGG | - | chr8_2:64955581-64955600 | Msa1262290:intron | 25.0% |
| !!! | GGTTTATTTTAATAGAGTTG+CGG | + | chr8_2:64955658-64955677 | None:intergenic | 25.0% |
| !!! | TTTTAGGAAACCTGATATTT+CGG | + | chr8_2:64955847-64955866 | None:intergenic | 25.0% |
| !!! | GTTTTTAAGGTGATGAAATT+AGG | - | chr8_2:64956044-64956063 | Msa1262290:CDS | 25.0% |
| ! | AAGAGTAAAAAAAGAAGCTT+TGG | - | chr8_2:64956131-64956150 | Msa1262290:intron | 25.0% |
| ! | AGAGTAAAAAAAGAAGCTTT+GGG | - | chr8_2:64956132-64956151 | Msa1262290:intron | 25.0% |
| ! | TGATTGAATTTGAAGGTTTA+AGG | - | chr8_2:64956218-64956237 | Msa1262290:intron | 25.0% |
| !! | GAAGGTTTAAGGTTTAATTT+AGG | - | chr8_2:64956229-64956248 | Msa1262290:intron | 25.0% |
| ! | CATGCAAATTTGCTTACTTT+GGG | + | chr8_2:64950510-64950529 | None:intergenic | 30.0% |
| ! | ACATGCAAATTTGCTTACTT+TGG | + | chr8_2:64950511-64950530 | None:intergenic | 30.0% |
| AGCAAATTTGCATGTAACTT+TGG | - | chr8_2:64950516-64950535 | Msa1262290:three_prime_UTR | 30.0% | |
| !!! | TTAGTTGTTGGCTTTTAATG+TGG | - | chr8_2:64950625-64950644 | Msa1262290:three_prime_UTR | 30.0% |
| GAAAATATTGGATGTTTGAG+TGG | - | chr8_2:64950666-64950685 | Msa1262290:three_prime_UTR | 30.0% | |
| GAATTTCATTGTTGACAGTT+TGG | - | chr8_2:64951041-64951060 | Msa1262290:three_prime_UTR | 30.0% | |
| ! | TTTTCAGATGATTCAAACAC+AGG | + | chr8_2:64951225-64951244 | Msa1262300:intron | 30.0% |
| GGCAATAGATAGTTAACAAA+GGG | + | chr8_2:64951255-64951274 | Msa1262300:intron | 30.0% | |
| AGGCAATAGATAGTTAACAA+AGG | + | chr8_2:64951256-64951275 | Msa1262300:intron | 30.0% | |
| ! | TTATAAGTCATCAGCCTTTT+AGG | + | chr8_2:64951401-64951420 | Msa1262300:intron | 30.0% |
| AACAAGAAAAATTCTTGGAG+AGG | + | chr8_2:64951671-64951690 | Msa1262300:intron | 30.0% | |
| GGACAAACAAGAAAAATTCT+TGG | + | chr8_2:64951676-64951695 | Msa1262300:intron | 30.0% | |
| ATATTAGAAGGAGAAAGATG+TGG | + | chr8_2:64951848-64951867 | Msa1262300:intron | 30.0% | |
| !! | GTTTGGTCTTTTTGAATCAA+AGG | + | chr8_2:64951897-64951916 | Msa1262300:intron | 30.0% |
| ! | TTTGATCAATTGCTACTTCA+TGG | - | chr8_2:64951957-64951976 | Msa1262290:intron | 30.0% |
| GATGAAGTTGTAGATTAGAA+TGG | + | chr8_2:64952022-64952041 | Msa1262300:intron | 30.0% | |
| GACTAGACTTTAACAACAAT+AGG | - | chr8_2:64952241-64952260 | Msa1262290:intron | 30.0% | |
| GTACTCAACCTTTGTAAATT+GGG | - | chr8_2:64952291-64952310 | Msa1262290:intron | 30.0% | |
| AAGAAATGAATTTGTCCTTC+AGG | + | chr8_2:64952373-64952392 | Msa1262300:intron | 30.0% | |
| ! | AAAGCAGCTTTATGACATTA+TGG | - | chr8_2:64952555-64952574 | Msa1262290:intron | 30.0% |
| !!! | AAGTCTTTAGGATTCTTTTG+GGG | + | chr8_2:64952611-64952630 | Msa1262300:intron | 30.0% |
| !!! | CTAAGTCTTTAGGATTCTTT+TGG | + | chr8_2:64952613-64952632 | Msa1262300:intron | 30.0% |
| TAGAAATTTACAGCCTAAAG+TGG | + | chr8_2:64952732-64952751 | Msa1262300:CDS | 30.0% | |
| TTGGTATTGTATCAGTTTAG+CGG | - | chr8_2:64952908-64952927 | Msa1262290:three_prime_UTR | 30.0% | |
| !!! | TTTTGAAACCATAGAAATCC+TGG | - | chr8_2:64952992-64953011 | Msa1262290:three_prime_UTR | 30.0% |
| ! | TTTGAAACCATAGAAATCCT+GGG | - | chr8_2:64952993-64953012 | Msa1262290:three_prime_UTR | 30.0% |
| ! | TACAACTTATTTCTTTGAGC+TGG | - | chr8_2:64953180-64953199 | Msa1262290:three_prime_UTR | 30.0% |
| GCCAGTAATTTACTTTATAC+TGG | - | chr8_2:64953202-64953221 | Msa1262290:three_prime_UTR | 30.0% | |
| ATGATTTATTCGGATCATGT+TGG | - | chr8_2:64953253-64953272 | Msa1262290:three_prime_UTR | 30.0% | |
| AATATGGAGTTCAAACAAAC+AGG | + | chr8_2:64953300-64953319 | None:intergenic | 30.0% | |
| TGTTTGTTTGAACTCCATAT+TGG | - | chr8_2:64953299-64953318 | Msa1262290:three_prime_UTR | 30.0% | |
| ACAATTCGATGAATTGATTG+TGG | + | chr8_2:64953569-64953588 | None:intergenic | 30.0% | |
| ! | AGAAGGATTGATCGTAATTT+TGG | + | chr8_2:64953694-64953713 | None:intergenic | 30.0% |
| AAATTACGATCAATCCTTCT+TGG | - | chr8_2:64953694-64953713 | Msa1262290:three_prime_UTR | 30.0% | |
| ACATACACATTCATTGAATC+GGG | - | chr8_2:64954237-64954256 | Msa1262290:intron | 30.0% | |
| CTTAAGAATAATGCACAAGA+TGG | + | chr8_2:64954344-64954363 | None:intergenic | 30.0% | |
| !!! | GTTTTTTGAAGTATCCTCTT+AGG | + | chr8_2:64954430-64954449 | None:intergenic | 30.0% |
| AACAAAAAAACTTGCCTAAG+AGG | - | chr8_2:64954451-64954470 | Msa1262290:CDS | 30.0% | |
| ! | TTATACGCATTAATTGGTCT+CGG | + | chr8_2:64954588-64954607 | None:intergenic | 30.0% |
| !! | AACAGAAAAAGTATCTCCTA+AGG | - | chr8_2:64954704-64954723 | Msa1262290:intron | 30.0% |
| AAACATGACCTTAATGAAGA+TGG | + | chr8_2:64954809-64954828 | None:intergenic | 30.0% | |
| ACGGATGTGGAAAAAATAAA+TGG | - | chr8_2:64955141-64955160 | Msa1262290:CDS | 30.0% | |
| GATGTGGAAAAAATAAATGG+CGG | - | chr8_2:64955144-64955163 | Msa1262290:CDS | 30.0% | |
| ATGTGGAAAAAATAAATGGC+GGG | - | chr8_2:64955145-64955164 | Msa1262290:CDS | 30.0% | |
| TGCAAAGTAGGATTACTATA+TGG | - | chr8_2:64955256-64955275 | Msa1262290:intron | 30.0% | |
| TACTATATGGAATATCCAAC+CGG | - | chr8_2:64955269-64955288 | Msa1262290:intron | 30.0% | |
| TGAAGTTGTGATTAAGTTTG+TGG | + | chr8_2:64955560-64955579 | None:intergenic | 30.0% | |
| ! | TTTTAATAGAGTTGCGGATT+TGG | + | chr8_2:64955652-64955671 | None:intergenic | 30.0% |
| ATTTGCAGAAGTTATGTGAA+GGG | + | chr8_2:64955680-64955699 | None:intergenic | 30.0% | |
| AATTTGCAGAAGTTATGTGA+AGG | + | chr8_2:64955681-64955700 | None:intergenic | 30.0% | |
| ATATTGTGAGGTTGCTTAAA+GGG | + | chr8_2:64955875-64955894 | None:intergenic | 30.0% | |
| AATATTGTGAGGTTGCTTAA+AGG | + | chr8_2:64955876-64955895 | None:intergenic | 30.0% | |
| AACCTCACAATATTCTTATG+CGG | - | chr8_2:64955882-64955901 | Msa1262290:intron | 30.0% | |
| ATATTCTTATGCGGTTTATC+AGG | - | chr8_2:64955891-64955910 | Msa1262290:intron | 30.0% | |
| !!! | AGAGAAGAAGTTGGTTTTTA+AGG | - | chr8_2:64956031-64956050 | Msa1262290:CDS | 30.0% |
| TGAAGTATAAGAAGAGTAAG+AGG | - | chr8_2:64956096-64956115 | Msa1262290:CDS | 30.0% | |
| GAGTAAAAAAAGAAGCTTTG+GGG | - | chr8_2:64956133-64956152 | Msa1262290:intron | 30.0% | |
| TTTAGGTGAGAATTGAGATT+TGG | - | chr8_2:64956246-64956265 | Msa1262290:intron | 30.0% | |
| ! | CAAATTTGCTTACTTTGGGA+GGG | + | chr8_2:64950506-64950525 | None:intergenic | 35.0% |
| !!! | TTGTTGGCTTTTAATGTGGT+TGG | - | chr8_2:64950629-64950648 | Msa1262290:three_prime_UTR | 35.0% |
| ! | TTAATGTGGTTGGTTGTTTC+AGG | - | chr8_2:64950639-64950658 | Msa1262290:three_prime_UTR | 35.0% |
| ! | TAATGTGGTTGGTTGTTTCA+GGG | - | chr8_2:64950640-64950659 | Msa1262290:three_prime_UTR | 35.0% |
| GTTTCAGGGAAGGAAAATAT+TGG | - | chr8_2:64950654-64950673 | Msa1262290:three_prime_UTR | 35.0% | |
| GGTTTCAAGAAATCATTGTG+TGG | - | chr8_2:64950687-64950706 | Msa1262290:three_prime_UTR | 35.0% | |
| TAACAACAAAACGGTTTCCA+TGG | + | chr8_2:64950761-64950780 | Msa1262300:CDS | 35.0% | |
| CCAGTGAGTTAACAACAAAA+CGG | + | chr8_2:64950770-64950789 | Msa1262300:CDS | 35.0% | |
| !! | ATGAAGCATTGATGCATATG+TGG | + | chr8_2:64950995-64951014 | Msa1262300:CDS | 35.0% |
| ! | CATTGTTGACAGTTTGGAAT+TGG | - | chr8_2:64951047-64951066 | Msa1262290:three_prime_UTR | 35.0% |
| AGAATTCCAGTTGTACTACT+TGG | - | chr8_2:64951125-64951144 | Msa1262290:three_prime_UTR | 35.0% | |
| TAACTACCAAGTAGTACAAC+TGG | + | chr8_2:64951134-64951153 | Msa1262300:CDS | 35.0% | |
| CAAAGGACCCAACAAAATTA+AGG | + | chr8_2:64951276-64951295 | Msa1262300:intron | 35.0% | |
| TCTGATTCACCAAGTATCAA+AGG | + | chr8_2:64951293-64951312 | Msa1262300:intron | 35.0% | |
| TTGGTGAATCAGAATCTTGA+GGG | - | chr8_2:64951300-64951319 | Msa1262290:intron | 35.0% | |
| ATTGTCTTATCAGGTATAGC+TGG | - | chr8_2:64951420-64951439 | Msa1262290:intron | 35.0% | |
| AATTCTTGGAGAGGTAAGAA+GGG | + | chr8_2:64951662-64951681 | Msa1262300:intron | 35.0% | |
| AAATTCTTGGAGAGGTAAGA+AGG | + | chr8_2:64951663-64951682 | Msa1262300:intron | 35.0% | |
| ! | AATGATGGAAAGCAAGTGAT+TGG | + | chr8_2:64951716-64951735 | Msa1262300:intron | 35.0% |
| ! | CAACTGTTTCTCAGAAATCA+TGG | + | chr8_2:64951792-64951811 | Msa1262300:intron | 35.0% |
| ! | TGTTTAGTAGTACTGGAGTT+TGG | + | chr8_2:64951914-64951933 | Msa1262300:intron | 35.0% |
| CATAGCATGTTTAGTAGTAC+TGG | + | chr8_2:64951921-64951940 | Msa1262300:intron | 35.0% | |
| CATGCAAAATGTGATTTAGG+AGG | - | chr8_2:64952123-64952142 | Msa1262290:intron | 35.0% | |
| GTGATTTAGGAGGTAAAGAT+AGG | - | chr8_2:64952133-64952152 | Msa1262290:intron | 35.0% | |
| GGTACTCAACCTTTGTAAAT+TGG | - | chr8_2:64952290-64952309 | Msa1262290:intron | 35.0% | |
| CCAGAATTCCCAATTTACAA+AGG | + | chr8_2:64952302-64952321 | Msa1262300:intron | 35.0% | |
| CCTTTGTAAATTGGGAATTC+TGG | - | chr8_2:64952299-64952318 | Msa1262290:intron | 35.0% | |
| TTGTAAATTGGGAATTCTGG+TGG | - | chr8_2:64952302-64952321 | Msa1262290:intron | 35.0% | |
| TAAACCAAGATAGGGAAGTT+TGG | + | chr8_2:64952328-64952347 | Msa1262300:intron | 35.0% | |
| CCTTGAAGTAAACCAAGATA+GGG | + | chr8_2:64952336-64952355 | Msa1262300:intron | 35.0% | |
| TCCTTGAAGTAAACCAAGAT+AGG | + | chr8_2:64952337-64952356 | Msa1262300:intron | 35.0% | |
| ! | TGTTCTTCATTGTTTCTTGC+TGG | - | chr8_2:64952510-64952529 | Msa1262290:intron | 35.0% |
| ! | TCTGTAGGCAGTAATTGTTT+TGG | - | chr8_2:64952662-64952681 | Msa1262290:intron | 35.0% |
| !! | GTTTTAGCATCAACCACTTT+AGG | - | chr8_2:64952716-64952735 | Msa1262290:intron | 35.0% |
| GACATTAGTGCCTATATCAT+TGG | - | chr8_2:64952889-64952908 | Msa1262290:three_prime_UTR | 35.0% | |
| GCGGTATATGCATAATACAA+TGG | - | chr8_2:64952927-64952946 | Msa1262290:three_prime_UTR | 35.0% | |
| !! | CAGTGAAGTTTCTGAAGTTT+GGG | - | chr8_2:64953023-64953042 | Msa1262290:three_prime_UTR | 35.0% |
| !! | AAGTTTGGGTTGTTTGTAAG+TGG | - | chr8_2:64953037-64953056 | Msa1262290:three_prime_UTR | 35.0% |
| ATTCTGAATGTCTGATACAC+AGG | - | chr8_2:64953353-64953372 | Msa1262290:three_prime_UTR | 35.0% | |
| AAAACCTCACTAAAACCCAA+AGG | - | chr8_2:64953419-64953438 | Msa1262290:three_prime_UTR | 35.0% | |
| GATTCTTGTGTAGATCCTTT+GGG | + | chr8_2:64953437-64953456 | None:intergenic | 35.0% | |
| TGATTCTTGTGTAGATCCTT+TGG | + | chr8_2:64953438-64953457 | None:intergenic | 35.0% | |
| AATTGATTGTGGATAGACGA+TGG | + | chr8_2:64953558-64953577 | None:intergenic | 35.0% | |
| !! | GGAAAGTGTTGATTCAAACT+AGG | - | chr8_2:64953630-64953649 | Msa1262290:three_prime_UTR | 35.0% |
| AATCATGATAACCCACACTA+CGG | - | chr8_2:64953747-64953766 | Msa1262290:three_prime_UTR | 35.0% | |
| TTCTTTAGCACTGCTATTAC+TGG | - | chr8_2:64953784-64953803 | Msa1262290:intron | 35.0% | |
| TCTTCCTCGTATATGAGATA+AGG | - | chr8_2:64953824-64953843 | Msa1262290:intron | 35.0% | |
| TCAAAGTTACTCTCAAGGAA+GGG | + | chr8_2:64953860-64953879 | None:intergenic | 35.0% | |
| TTCAAAGTTACTCTCAAGGA+AGG | + | chr8_2:64953861-64953880 | None:intergenic | 35.0% | |
| TGGGAATATCATGTTCTCAA+AGG | + | chr8_2:64953887-64953906 | None:intergenic | 35.0% | |
| CTGCTCAAAATAGATGTTCA+GGG | + | chr8_2:64953911-64953930 | None:intergenic | 35.0% | |
| TCTGCTCAAAATAGATGTTC+AGG | + | chr8_2:64953912-64953931 | None:intergenic | 35.0% | |
| TTAATTTCCAGTTGGTTGGT+AGG | + | chr8_2:64954057-64954076 | None:intergenic | 35.0% | |
| AAACATCAGCCATGAATGAT+AGG | - | chr8_2:64954096-64954115 | Msa1262290:intron | 35.0% | |
| TAGCAGCATTGCATGATAAA+TGG | - | chr8_2:64954122-64954141 | Msa1262290:three_prime_UTR | 35.0% | |
| CATACACATTCATTGAATCG+GGG | - | chr8_2:64954238-64954257 | Msa1262290:intron | 35.0% | |
| AGTGTCAATATTCTCCTCTT+AGG | + | chr8_2:64954468-64954487 | None:intergenic | 35.0% | |
| CATATGCCATTCCAAATGAA+TGG | - | chr8_2:64954562-64954581 | Msa1262290:intron | 35.0% | |
| ! | GACCTTAATGAAGATGGATT+GGG | + | chr8_2:64954803-64954822 | None:intergenic | 35.0% |
| TGACCTTAATGAAGATGGAT+TGG | + | chr8_2:64954804-64954823 | None:intergenic | 35.0% | |
| TTTGTGTGGAGCTAATATTC+AGG | + | chr8_2:64954903-64954922 | None:intergenic | 35.0% | |
| GAATATTAGCTCCACACAAA+TGG | - | chr8_2:64954903-64954922 | Msa1262290:intron | 35.0% | |
| CGAGTATAGTAAGCAATTAG+AGG | + | chr8_2:64955046-64955065 | None:intergenic | 35.0% | |
| CTTACTATACTCGAACTAGA+CGG | - | chr8_2:64955053-64955072 | Msa1262290:intron | 35.0% | |
| ! | GAAAGTATAGGTGTGGTTAA+TGG | + | chr8_2:64955367-64955386 | None:intergenic | 35.0% |
| ! | GACTTTAGAAAGTATAGGTG+TGG | + | chr8_2:64955374-64955393 | None:intergenic | 35.0% |
| AACTTAGGTTTGTGAGTAGT+TGG | + | chr8_2:64955449-64955468 | None:intergenic | 35.0% | |
| AGGGATTGTAGTAGAAACTT+AGG | + | chr8_2:64955464-64955483 | None:intergenic | 35.0% | |
| TGTGAATTGAACTGTAGTGA+GGG | + | chr8_2:64955483-64955502 | None:intergenic | 35.0% | |
| TTGTGAATTGAACTGTAGTG+AGG | + | chr8_2:64955484-64955503 | None:intergenic | 35.0% | |
| TGGTAACATTACCGTTCATA+AGG | + | chr8_2:64955595-64955614 | None:intergenic | 35.0% | |
| ! | GGATTTGGTTACTTTGTTTG+AGG | + | chr8_2:64955637-64955656 | None:intergenic | 35.0% |
| TTTGCAGAAGTTATGTGAAG+GGG | + | chr8_2:64955679-64955698 | None:intergenic | 35.0% | |
| TGATATTTCGGTTACTGTTC+AGG | + | chr8_2:64955835-64955854 | None:intergenic | 35.0% | |
| TGAACAGTAACCGAAATATC+AGG | - | chr8_2:64955834-64955853 | Msa1262290:intron | 35.0% | |
| ! | TGCTTAAAGGGAAAGCTTTT+AGG | + | chr8_2:64955863-64955882 | None:intergenic | 35.0% |
| AACCGCATAAGAATATTGTG+AGG | + | chr8_2:64955887-64955906 | None:intergenic | 35.0% | |
| ATCAGGTAAGTTTCCGAAAT+CGG | - | chr8_2:64955908-64955927 | Msa1262290:intron | 35.0% | |
| GATTGAGTTAGAGAAGAAGT+TGG | - | chr8_2:64956022-64956041 | Msa1262290:CDS | 35.0% | |
| AAGGTGATGAAATTAGGGTT+AGG | - | chr8_2:64956050-64956069 | Msa1262290:CDS | 35.0% | |
| AGGTGATGAAATTAGGGTTA+GGG | - | chr8_2:64956051-64956070 | Msa1262290:CDS | 35.0% | |
| AAATTAGGGTTAGGGTTTGA+AGG | - | chr8_2:64956059-64956078 | Msa1262290:CDS | 35.0% | |
| ! | GTGGTGATGATTGAATTTGA+AGG | - | chr8_2:64956211-64956230 | Msa1262290:intron | 35.0% |
| TGAGATTTGGATCTGTGAAA+TGG | - | chr8_2:64956259-64956278 | Msa1262290:intron | 35.0% | |
| ! | TACTTTGGGAGGGAAGAAAA+CGG | + | chr8_2:64950496-64950515 | None:intergenic | 40.0% |
| ! | GCAAATTTGCTTACTTTGGG+AGG | + | chr8_2:64950507-64950526 | None:intergenic | 40.0% |
| !!! | CCGTTTTGTTGTTAACTCAC+TGG | - | chr8_2:64950767-64950786 | Msa1262290:three_prime_UTR | 40.0% |
| AAAAAACATAGAGCCACTCG+AGG | + | chr8_2:64950803-64950822 | Msa1262300:CDS | 40.0% | |
| ! | CTTCAGATTGAAAGCGTGTA+TGG | - | chr8_2:64950916-64950935 | Msa1262290:three_prime_UTR | 40.0% |
| ! | GTTGACAGTTTGGAATTGGA+AGG | - | chr8_2:64951051-64951070 | Msa1262290:three_prime_UTR | 40.0% |
| ! | ACAGTTTGGAATTGGAAGGA+AGG | - | chr8_2:64951055-64951074 | Msa1262290:three_prime_UTR | 40.0% |
| ACAACTGGAATTCTGTAGTC+TGG | + | chr8_2:64951119-64951138 | Msa1262300:CDS | 40.0% | |
| GGCCAGTTACAATCAAATGA+AGG | - | chr8_2:64951199-64951218 | Msa1262290:intron | 40.0% | |
| GGCCTTCATTTGATTGTAAC+TGG | + | chr8_2:64951204-64951223 | Msa1262300:intron | 40.0% | |
| TTGTTGGGTCCTTTGATACT+TGG | - | chr8_2:64951281-64951300 | Msa1262290:intron | 40.0% | |
| CTTGGTGAATCAGAATCTTG+AGG | - | chr8_2:64951299-64951318 | Msa1262290:intron | 40.0% | |
| ATCAAAGACGAATCTCACTC+TGG | + | chr8_2:64951620-64951639 | Msa1262300:intron | 40.0% | |
| ! | CTGTTTCTCAGAAATCATGG+AGG | + | chr8_2:64951789-64951808 | Msa1262300:intron | 40.0% |
| CCCTATCTTGGTTTACTTCA+AGG | - | chr8_2:64952333-64952352 | Msa1262290:intron | 40.0% | |
| GAAACACAAACAAAGCCTGA+AGG | - | chr8_2:64952355-64952374 | Msa1262290:intron | 40.0% | |
| !!! | GTTTGTTTTGCCAAGCAGAA+TGG | - | chr8_2:64952532-64952551 | Msa1262290:intron | 40.0% |
| ! | GCAGCTTTATGACATTATGG+TGG | - | chr8_2:64952558-64952577 | Msa1262290:intron | 40.0% |
| !!! | TTGGGGCACTAGTTTTTGAA+GGG | + | chr8_2:64952594-64952613 | Msa1262300:intron | 40.0% |
| !!! | TTTGGGGCACTAGTTTTTGA+AGG | + | chr8_2:64952595-64952614 | Msa1262300:intron | 40.0% |
| ATCCTAAAGACTTAGCTGTG+TGG | - | chr8_2:64952618-64952637 | Msa1262290:intron | 40.0% | |
| CATAACTACTAACCTAAGCC+AGG | + | chr8_2:64952770-64952789 | Msa1262300:CDS | 40.0% | |
| ! | AGAATCTCAAGACCCTTTTG+TGG | + | chr8_2:64952821-64952840 | Msa1262300:CDS | 40.0% |
| AACTTCAGAAACTTCACTGC+AGG | + | chr8_2:64953022-64953041 | Msa1262300:CDS | 40.0% | |
| !! | GCAGTGAAGTTTCTGAAGTT+TGG | - | chr8_2:64953022-64953041 | Msa1262290:three_prime_UTR | 40.0% |
| GGTTGTTTGTAAGTGGAAGA+TGG | - | chr8_2:64953044-64953063 | Msa1262290:three_prime_UTR | 40.0% | |
| !! | AGATCCTTTGGGTTTTAGTG+AGG | + | chr8_2:64953426-64953445 | None:intergenic | 40.0% |
| TCATCGAATTGTTCACTGCT+CGG | - | chr8_2:64953577-64953596 | Msa1262290:three_prime_UTR | 40.0% | |
| TCAGTTATGCAGACTCTAGA+TGG | + | chr8_2:64953670-64953689 | None:intergenic | 40.0% | |
| TATCATGATTGCACCCAACA+TGG | + | chr8_2:64953737-64953756 | None:intergenic | 40.0% | |
| AGCTCCTTATCTCATATACG+AGG | + | chr8_2:64953831-64953850 | None:intergenic | 40.0% | |
| CGTATATGAGATAAGGAGCT+TGG | - | chr8_2:64953831-64953850 | Msa1262290:intron | 40.0% | |
| GAGCTTCAAAGTTACTCTCA+AGG | + | chr8_2:64953865-64953884 | None:intergenic | 40.0% | |
| CAAAATAGATGTTCAGGGCT+GGG | + | chr8_2:64953906-64953925 | None:intergenic | 40.0% | |
| TCAAAATAGATGTTCAGGGC+TGG | + | chr8_2:64953907-64953926 | None:intergenic | 40.0% | |
| GGTCTTAATTTCCAGTTGGT+TGG | + | chr8_2:64954061-64954080 | None:intergenic | 40.0% | |
| TTGGGGTCTTAATTTCCAGT+TGG | + | chr8_2:64954065-64954084 | None:intergenic | 40.0% | |
| CTGCTACTACCTATCATTCA+TGG | + | chr8_2:64954108-64954127 | None:intergenic | 40.0% | |
| ! | GTCTAAAACAATGAGAGCCT+TGG | - | chr8_2:64954174-64954193 | Msa1262290:CDS | 40.0% |
| TCAACGATAATCACTTCTCG+TGG | + | chr8_2:64954370-64954389 | None:intergenic | 40.0% | |
| ! | ACGTTTTCATCTTGCCTAAG+AGG | - | chr8_2:64954413-64954432 | Msa1262290:CDS | 40.0% |
| AGACCTGATTATCTCAGACA+GGG | + | chr8_2:64954643-64954662 | None:intergenic | 40.0% | |
| TTGAGAACAATCATGGCTGT+TGG | + | chr8_2:64954673-64954692 | None:intergenic | 40.0% | |
| ! | ATTCTGCTGTTAGCTTCCTT+AGG | + | chr8_2:64954723-64954742 | None:intergenic | 40.0% |
| GACCCAATCCATCTTCATTA+AGG | - | chr8_2:64954798-64954817 | Msa1262290:intron | 40.0% | |
| AGGATATTTGCGTACTCTTG+CGG | + | chr8_2:64954883-64954902 | None:intergenic | 40.0% | |
| AGATCTCGTGCAAGATTGAA+CGG | - | chr8_2:64955122-64955141 | Msa1262290:intron | 40.0% | |
| TAATAACAACACTTGGCACC+TGG | + | chr8_2:64955180-64955199 | None:intergenic | 40.0% | |
| TACGGTGAATCTTGCAAAGT+AGG | - | chr8_2:64955244-64955263 | Msa1262290:intron | 40.0% | |
| GAATATCCAACCGGAAAGTT+GGG | - | chr8_2:64955278-64955297 | Msa1262290:CDS | 40.0% | |
| TTCTGCAAATTCTCCAACAC+AGG | - | chr8_2:64955690-64955709 | Msa1262290:intron | 40.0% | |
| TTGAGAAAGCTAAGAGTGAG+GGG | + | chr8_2:64955806-64955825 | None:intergenic | 40.0% | |
| CTTGAGAAAGCTAAGAGTGA+GGG | + | chr8_2:64955807-64955826 | None:intergenic | 40.0% | |
| TATTTCGGTTACTGTTCAGG+AGG | + | chr8_2:64955832-64955851 | None:intergenic | 40.0% | |
| CTCTTCTCTCTTTCCGATTT+CGG | + | chr8_2:64955924-64955943 | None:intergenic | 40.0% | |
| TCGGAAAGAGAGAAGAGAAA+CGG | - | chr8_2:64955927-64955946 | Msa1262290:intron | 40.0% | |
| GGGATTTGATGCAATCGAAA+GGG | - | chr8_2:64955997-64956016 | Msa1262290:intron | 40.0% | |
| GGATTTGATGCAATCGAAAG+GGG | - | chr8_2:64955998-64956017 | Msa1262290:intron | 40.0% | |
| ! | TCTTTTCCATGCATTTGCCA+TGG | - | chr8_2:64956178-64956197 | Msa1262290:intron | 40.0% |
| TGGATCTGTGAAATGGTTCT+AGG | - | chr8_2:64956266-64956285 | Msa1262290:intron | 40.0% | |
| TGTTCAATCCAAACCTCCCT+GGG | - | chr8_2:64950718-64950737 | Msa1262290:three_prime_UTR | 45.0% | |
| ! | TGGTAATTTGCAACCTCGAG+TGG | - | chr8_2:64950787-64950806 | Msa1262290:three_prime_UTR | 45.0% |
| TTGGATGTAACCACGTGTGT+CGG | + | chr8_2:64950944-64950963 | Msa1262300:CDS | 45.0% | |
| ! | GGAATTCTGTAGTCTGGTTC+AGG | + | chr8_2:64951113-64951132 | Msa1262300:CDS | 45.0% |
| GTCTTATCAGGTATAGCTGG+TGG | - | chr8_2:64951423-64951442 | Msa1262290:intron | 45.0% | |
| ATCAGGTATAGCTGGTGGTT+TGG | - | chr8_2:64951428-64951447 | Msa1262290:intron | 45.0% | |
| TCTCCTTGGATTGCTTCTGT+TGG | - | chr8_2:64951488-64951507 | Msa1262290:intron | 45.0% | |
| AAAGACGAATCTCACTCTGG+TGG | + | chr8_2:64951617-64951636 | Msa1262300:intron | 45.0% | |
| !! | CGTCTTTGATGACGAGTCTT+TGG | - | chr8_2:64951630-64951649 | Msa1262290:intron | 45.0% |
| TCAGGTGAGAATGCTTTCGT+CGG | - | chr8_2:64952172-64952191 | Msa1262290:intron | 45.0% | |
| TCGTCGGTGGAAAAAATCGT+TGG | - | chr8_2:64952188-64952207 | Msa1262290:intron | 45.0% | |
| ! | AAGCTGCTTTCCATTCTGCT+TGG | + | chr8_2:64952545-64952564 | Msa1262300:intron | 45.0% |
| ! | GACATTATGGTGGAAAGAGC+CGG | - | chr8_2:64952568-64952587 | Msa1262290:intron | 45.0% |
| AGCCACACAGCTAAGTCTTT+AGG | + | chr8_2:64952623-64952642 | Msa1262300:intron | 45.0% | |
| !! | CCTACAGACATTGATTCCTG+AGG | + | chr8_2:64952650-64952669 | Msa1262300:intron | 45.0% |
| CCTCAGGAATCAATGTCTGT+AGG | - | chr8_2:64952647-64952666 | Msa1262290:intron | 45.0% | |
| CTATTTGTCTTCCGAGATCC+TGG | - | chr8_2:64952749-64952768 | Msa1262290:three_prime_UTR | 45.0% | |
| ACTAACCTAAGCCAGGATCT+CGG | + | chr8_2:64952763-64952782 | Msa1262300:CDS | 45.0% | |
| CAGGATTCCCAGGATTTCTA+TGG | + | chr8_2:64953003-64953022 | Msa1262300:CDS | 45.0% | |
| ATGGAAGCAGTTGAGATAGC+TGG | + | chr8_2:64953539-64953558 | None:intergenic | 45.0% | |
| !! | AATTTGCTGACACTCGGTGT+TGG | - | chr8_2:64953601-64953620 | Msa1262290:three_prime_UTR | 45.0% |
| AAATGCCAACTTTGCTCCTG+TGG | - | chr8_2:64954009-64954028 | Msa1262290:intron | 45.0% | |
| ACAATGAGAGCCTTGGCATA+AGG | - | chr8_2:64954181-64954200 | Msa1262290:CDS | 45.0% | |
| CAATGAGAGCCTTGGCATAA+GGG | - | chr8_2:64954182-64954201 | Msa1262290:CDS | 45.0% | |
| AATGAGAGCCTTGGCATAAG+GGG | - | chr8_2:64954183-64954202 | Msa1262290:CDS | 45.0% | |
| TACAATGAAAGCAGACCAGC+TGG | - | chr8_2:64954508-64954527 | Msa1262290:intron | 45.0% | |
| TCTCGGCCATTCATTTGGAA+TGG | + | chr8_2:64954571-64954590 | None:intergenic | 45.0% | |
| ! | ATTGGTCTCGGCCATTCATT+TGG | + | chr8_2:64954576-64954595 | None:intergenic | 45.0% |
| GATTATCTCAGACAGGGCTA+TGG | + | chr8_2:64954637-64954656 | None:intergenic | 45.0% | |
| ! | TAGCCCTGTCTGAGATAATC+AGG | - | chr8_2:64954637-64954656 | Msa1262290:intron | 45.0% |
| CAGACCTGATTATCTCAGAC+AGG | + | chr8_2:64954644-64954663 | None:intergenic | 45.0% | |
| CAGCCATGATTGTTCTCAAC+TGG | - | chr8_2:64954674-64954693 | Msa1262290:intron | 45.0% | |
| GAGCCAGTTGAGAACAATCA+TGG | + | chr8_2:64954680-64954699 | None:intergenic | 45.0% | |
| ! | TGGATTGGGTCTGTAGCTAA+TGG | + | chr8_2:64954789-64954808 | None:intergenic | 45.0% |
| ! | CGGAAAGGTTGATCAACTTG+AGG | + | chr8_2:64954863-64954882 | None:intergenic | 45.0% |
| ATTTGCGTACTCTTGCGGAA+AGG | + | chr8_2:64954878-64954897 | None:intergenic | 45.0% | |
| GGAATATCCAACCGGAAAGT+TGG | - | chr8_2:64955277-64955296 | Msa1262290:CDS | 45.0% | |
| ! | TTTGTTTGAGGCTGCTGCTT+CGG | + | chr8_2:64955625-64955644 | None:intergenic | 45.0% |
| ! | GGTTATGGGGTTTCGTGTTT+TGG | + | chr8_2:64955724-64955743 | None:intergenic | 45.0% |
| GTTGATGTGGGTGCTAATGT+GGG | + | chr8_2:64955768-64955787 | None:intergenic | 45.0% | |
| TGTTGATGTGGGTGCTAATG+TGG | + | chr8_2:64955769-64955788 | None:intergenic | 45.0% | |
| !! | GATGGGTTGGTTGTTGATGT+GGG | + | chr8_2:64955780-64955799 | None:intergenic | 45.0% |
| GCTTGAGAAAGCTAAGAGTG+AGG | + | chr8_2:64955808-64955827 | None:intergenic | 45.0% | |
| CGACAATAGGGTGAGATTGT+GGG | - | chr8_2:64955976-64955995 | Msa1262290:intron | 45.0% | |
| GACAATAGGGTGAGATTGTG+GGG | - | chr8_2:64955977-64955996 | Msa1262290:intron | 45.0% | |
| GGGGATTTGATGCAATCGAA+AGG | - | chr8_2:64955996-64956015 | Msa1262290:intron | 45.0% | |
| TTAGGGTTAGGGTTTGAAGG+AGG | - | chr8_2:64956062-64956081 | Msa1262290:CDS | 45.0% | |
| TTTGGGGAGAGTAAACGAGA+GGG | - | chr8_2:64956149-64956168 | Msa1262290:intron | 45.0% | |
| CATTGTCCATGGCAAATGCA+TGG | + | chr8_2:64956187-64956206 | None:intergenic | 45.0% | |
| CATGCATTTGCCATGGACAA+TGG | - | chr8_2:64956185-64956204 | Msa1262290:intron | 45.0% | |
| ACGGTGTACGGACAACAAAG+TGG | + | chr8_2:64950477-64950496 | None:intergenic | 50.0% | |
| GGAGGGAAGAAAACGGTGTA+CGG | + | chr8_2:64950489-64950508 | None:intergenic | 50.0% | |
| ! | GTGGTTGGTTGTTTCAGGGA+AGG | - | chr8_2:64950644-64950663 | Msa1262290:three_prime_UTR | 50.0% |
| GTGTTCAATCCAAACCTCCC+TGG | - | chr8_2:64950717-64950736 | Msa1262290:three_prime_UTR | 50.0% | |
| TTTAGTCTCCCAGGGAGGTT+TGG | + | chr8_2:64950729-64950748 | Msa1262300:CDS | 50.0% | |
| ! | TTCCAGGCTTTAGTCTCCCA+GGG | + | chr8_2:64950737-64950756 | Msa1262300:CDS | 50.0% |
| AGACTAAAGCCTGGAAGCCA+TGG | - | chr8_2:64950741-64950760 | Msa1262290:three_prime_UTR | 50.0% | |
| AAACGGTTTCCATGGCTTCC+AGG | + | chr8_2:64950753-64950772 | Msa1262300:CDS | 50.0% | |
| AGCAATCCAAGGAGACCAAC+AGG | + | chr8_2:64951483-64951502 | Msa1262300:intron | 50.0% | |
| GGACCAACAGAAGCAATCCA+AGG | + | chr8_2:64951494-64951513 | Msa1262300:intron | 50.0% | |
| TGGATTGCTTCTGTTGGTCC+AGG | - | chr8_2:64951494-64951513 | Msa1262290:intron | 50.0% | |
| GTGGCCAAACTTCCCTATCT+TGG | - | chr8_2:64952321-64952340 | Msa1262290:intron | 50.0% | |
| !!! | GGCACTAGTTTTTGAAGGGC+CGG | + | chr8_2:64952590-64952609 | Msa1262300:intron | 50.0% |
| AACTTCACTGCAGGATTCCC+AGG | + | chr8_2:64953013-64953032 | Msa1262300:CDS | 50.0% | |
| !! | CTCGGCAATTTGCTGACACT+CGG | - | chr8_2:64953595-64953614 | Msa1262290:three_prime_UTR | 50.0% |
| TGATGCACACTGCACCAAGA+AGG | + | chr8_2:64953711-64953730 | None:intergenic | 50.0% | |
| AGTGTGCATCAGTGCCATGT+TGG | - | chr8_2:64953720-64953739 | Msa1262290:three_prime_UTR | 50.0% | |
| GTGTGCATCAGTGCCATGTT+GGG | - | chr8_2:64953721-64953740 | Msa1262290:three_prime_UTR | 50.0% | |
| CGAGACTTTCTCCGTAGTGT+GGG | + | chr8_2:64953761-64953780 | None:intergenic | 50.0% | |
| TCGAGACTTTCTCCGTAGTG+TGG | + | chr8_2:64953762-64953781 | None:intergenic | 50.0% | |
| ! | GGAAGATGAGCGTTTGTTGC+AGG | + | chr8_2:64953810-64953829 | None:intergenic | 50.0% |
| GCTGGAATCACTTCATCCAG+CGG | - | chr8_2:64953947-64953966 | Msa1262290:intron | 50.0% | |
| TTCTGCCACAGGAGCAAAGT+TGG | + | chr8_2:64954017-64954036 | None:intergenic | 50.0% | |
| !! | TTTCCAGTTGGTTGGTAGGC+TGG | + | chr8_2:64954053-64954072 | None:intergenic | 50.0% |
| ATGAGAGCCTTGGCATAAGG+GGG | - | chr8_2:64954184-64954203 | Msa1262290:CDS | 50.0% | |
| TGACTCATCAAAGAGCCAGC+TGG | + | chr8_2:64954526-64954545 | None:intergenic | 50.0% | |
| ! | GCTGGCTCTTTGATGAGTCA+TGG | - | chr8_2:64954526-64954545 | Msa1262290:intron | 50.0% |
| CGTGCAAGATTGAACGGATG+TGG | - | chr8_2:64955128-64955147 | Msa1262290:intron | 50.0% | |
| TAACAACACTTGGCACCTGG+CGG | + | chr8_2:64955177-64955196 | None:intergenic | 50.0% | |
| AATCAGCCCAACTTTCCGGT+TGG | + | chr8_2:64955287-64955306 | None:intergenic | 50.0% | |
| GGTGAATCAGCCCAACTTTC+CGG | + | chr8_2:64955291-64955310 | None:intergenic | 50.0% | |
| TTTGGCGTTTGAGCCTGTGT+TGG | + | chr8_2:64955706-64955725 | None:intergenic | 50.0% | |
| TGTGGGTGCTAATGTGGGAA+TGG | + | chr8_2:64955763-64955782 | None:intergenic | 50.0% | |
| !! | GGATGGGTTGGTTGTTGATG+TGG | + | chr8_2:64955781-64955800 | None:intergenic | 50.0% |
| CTAAGAGTGAGGGGATGGAT+GGG | + | chr8_2:64955797-64955816 | None:intergenic | 50.0% | |
| GAAAGCTAAGAGTGAGGGGA+TGG | + | chr8_2:64955802-64955821 | None:intergenic | 50.0% | |
| GCGACAATAGGGTGAGATTG+TGG | - | chr8_2:64955975-64955994 | Msa1262290:intron | 50.0% | |
| TAGGGTTTGAAGGAGGAGTG+AGG | - | chr8_2:64956069-64956088 | Msa1262290:CDS | 50.0% | |
| ! | CTTTGGGGAGAGTAAACGAG+AGG | - | chr8_2:64956148-64956167 | Msa1262290:intron | 50.0% |
| TTGCCATGGACAATGGACAG+TGG | - | chr8_2:64956192-64956211 | Msa1262290:intron | 50.0% | |
| TCACCACTGTCCATTGTCCA+TGG | + | chr8_2:64956198-64956217 | None:intergenic | 50.0% | |
| ! | GAAGAAGAAGAGCGTGTGAC+TGG | - | chr8_2:64956288-64956307 | Msa1262290:CDS | 50.0% |
| ! | CTTCCAGGCTTTAGTCTCCC+AGG | + | chr8_2:64950738-64950757 | Msa1262300:CDS | 55.0% |
| !! | GTGTATGGTACCGACACACG+TGG | - | chr8_2:64950931-64950950 | Msa1262290:three_prime_UTR | 55.0% |
| CTAGTGCCTGCAGTACCTGT+TGG | - | chr8_2:64951465-64951484 | Msa1262290:intron | 55.0% | |
| ! | AGGAGACCAACAGGTACTGC+AGG | + | chr8_2:64951474-64951493 | Msa1262300:intron | 55.0% |
| ! | GCAGTACCTGTTGGTCTCCT+TGG | - | chr8_2:64951474-64951493 | Msa1262290:intron | 55.0% |
| GGCGATCAGCTCGATGAATC+AGG | - | chr8_2:64952154-64952173 | Msa1262290:intron | 55.0% | |
| GGTGAGAATGCTTTCGTCGG+TGG | - | chr8_2:64952175-64952194 | Msa1262290:intron | 55.0% | |
| GTCTTCCGAGATCCTGGCTT+AGG | - | chr8_2:64952755-64952774 | Msa1262290:three_prime_UTR | 55.0% | |
| !! | GACACTCGGTGTTGGTCAAC+TGG | - | chr8_2:64953609-64953628 | Msa1262290:three_prime_UTR | 55.0% |
| TCAAGTACGCACTGTTCCGC+TGG | + | chr8_2:64953966-64953985 | None:intergenic | 55.0% | |
| AACAGTGCGGTTTCTGCCAC+AGG | + | chr8_2:64954028-64954047 | None:intergenic | 55.0% | |
| TGGTAGGCTGGACAACAGTG+CGG | + | chr8_2:64954041-64954060 | None:intergenic | 55.0% | |
| TGTCCAGCCTACCAACCAAC+TGG | - | chr8_2:64954047-64954066 | Msa1262290:intron | 55.0% | |
| TGAGAGCCTTGGCATAAGGG+GGG | - | chr8_2:64954185-64954204 | Msa1262290:CDS | 55.0% | |
| AGACAGGGCTATGGATTCCC+TGG | + | chr8_2:64954628-64954647 | None:intergenic | 55.0% | |
| CTCCACACAAATGGCACGCT+GGG | - | chr8_2:64954912-64954931 | Msa1262290:intron | 55.0% | |
| AGTTTCGCTGCGGCGGTTAT+GGG | + | chr8_2:64955738-64955757 | None:intergenic | 55.0% | |
| GCTAAGAGTGAGGGGATGGA+TGG | + | chr8_2:64955798-64955817 | None:intergenic | 55.0% | |
| ACGAACACCTTCAACGACGC+TGG | - | chr8_2:64955953-64955972 | Msa1262290:intron | 55.0% | |
| ATTGTCGCCAGCGTCGTTGA+AGG | + | chr8_2:64955963-64955982 | None:intergenic | 55.0% | |
| TCAACGACGCTGGCGACAAT+AGG | - | chr8_2:64955963-64955982 | Msa1262290:intron | 55.0% | |
| CAACGACGCTGGCGACAATA+GGG | - | chr8_2:64955964-64955983 | Msa1262290:intron | 55.0% | |
| ! | CAGGCTTTAGTCTCCCAGGG+AGG | + | chr8_2:64950734-64950753 | Msa1262300:CDS | 60.0% |
| CTCCCTGGGAGACTAAAGCC+TGG | - | chr8_2:64950732-64950751 | Msa1262290:three_prime_UTR | 60.0% | |
| ! | AGCTGTGTGGCTTGTGCCTC+AGG | - | chr8_2:64952631-64952650 | Msa1262290:intron | 60.0% |
| GCACTGCGACGAAGGGAAAC+AGG | + | chr8_2:64953077-64953096 | None:intergenic | 60.0% | |
| TCCCTTCGTCGCAGTGCTCT+CGG | - | chr8_2:64953080-64953099 | Msa1262290:three_prime_UTR | 60.0% | |
| !! | TCCGAGAGCACTGCGACGAA+GGG | + | chr8_2:64953084-64953103 | None:intergenic | 60.0% |
| !! | ATCCGAGAGCACTGCGACGA+AGG | + | chr8_2:64953085-64953104 | None:intergenic | 60.0% |
| ! | AGAAGCACGCGCTCTGATGC+TGG | - | chr8_2:64953929-64953948 | Msa1262290:intron | 60.0% |
| GGTGTACCCCCCTTATGCCA+AGG | + | chr8_2:64954194-64954213 | None:intergenic | 60.0% | |
| GCTCCACACAAATGGCACGC+TGG | - | chr8_2:64954911-64954930 | Msa1262290:intron | 60.0% | |
| !! | GACCCAGCGTGCCATTTGTG+TGG | + | chr8_2:64954917-64954936 | None:intergenic | 60.0% |
| ! | AATGGCGGGAAAACACCGCC+AGG | - | chr8_2:64955159-64955178 | Msa1262290:intron | 60.0% |
| ! | GCTGCTGCTTCGGATCGTCT+TGG | + | chr8_2:64955615-64955634 | None:intergenic | 60.0% |
| GTTTCGCTGCGGCGGTTATG+GGG | + | chr8_2:64955737-64955756 | None:intergenic | 60.0% | |
| GAGTTTCGCTGCGGCGGTTA+TGG | + | chr8_2:64955739-64955758 | None:intergenic | 60.0% | |
| AATGGCGAGTTTCGCTGCGG+CGG | + | chr8_2:64955745-64955764 | None:intergenic | 60.0% | |
| GGGAATGGCGAGTTTCGCTG+CGG | + | chr8_2:64955748-64955767 | None:intergenic | 60.0% | |
| GAGTGAGGGGATGGATGGGT+TGG | + | chr8_2:64955793-64955812 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 64950431 | 64956355 | 64950431 | ID=Msa1262290;Name=Msa1262290 |
| chr8_2 | mRNA | 64950431 | 64956355 | 64950431 | ID=Msa1262290-mRNA-1;Parent=Msa1262290;Name=Msa1262290-mRNA-1;_AED=0.16;_eAED=0.16;_QI=36|0.87|0.77|1|0.75|0.66|9|1901|178 |
| chr8_2 | exon | 64950431 | 64951187 | 64950431 | ID=Msa1262290-mRNA-1:exon:21027;Parent=Msa1262290-mRNA-1 |
| chr8_2 | exon | 64952718 | 64953802 | 64952718 | ID=Msa1262290-mRNA-1:exon:21026;Parent=Msa1262290-mRNA-1 |
| chr8_2 | exon | 64954103 | 64954236 | 64954103 | ID=Msa1262290-mRNA-1:exon:21025;Parent=Msa1262290-mRNA-1 |
| chr8_2 | exon | 64954381 | 64954495 | 64954381 | ID=Msa1262290-mRNA-1:exon:21024;Parent=Msa1262290-mRNA-1 |
| chr8_2 | exon | 64954574 | 64954644 | 64954574 | ID=Msa1262290-mRNA-1:exon:21023;Parent=Msa1262290-mRNA-1 |
| chr8_2 | exon | 64955135 | 64955173 | 64955135 | ID=Msa1262290-mRNA-1:exon:21022;Parent=Msa1262290-mRNA-1 |
| chr8_2 | exon | 64955271 | 64955353 | 64955271 | ID=Msa1262290-mRNA-1:exon:21021;Parent=Msa1262290-mRNA-1 |
| chr8_2 | exon | 64956018 | 64956125 | 64956018 | ID=Msa1262290-mRNA-1:exon:21020;Parent=Msa1262290-mRNA-1 |
| chr8_2 | exon | 64956274 | 64956355 | 64956274 | ID=Msa1262290-mRNA-1:exon:21019;Parent=Msa1262290-mRNA-1 |
| chr8_2 | five_prime_UTR | 64956320 | 64956355 | 64956320 | ID=Msa1262290-mRNA-1:five_prime_utr;Parent=Msa1262290-mRNA-1 |
| chr8_2 | CDS | 64956274 | 64956319 | 64956274 | ID=Msa1262290-mRNA-1:cds;Parent=Msa1262290-mRNA-1 |
| chr8_2 | CDS | 64956018 | 64956125 | 64956018 | ID=Msa1262290-mRNA-1:cds;Parent=Msa1262290-mRNA-1 |
| chr8_2 | CDS | 64955271 | 64955353 | 64955271 | ID=Msa1262290-mRNA-1:cds;Parent=Msa1262290-mRNA-1 |
| chr8_2 | CDS | 64955135 | 64955173 | 64955135 | ID=Msa1262290-mRNA-1:cds;Parent=Msa1262290-mRNA-1 |
| chr8_2 | CDS | 64954574 | 64954644 | 64954574 | ID=Msa1262290-mRNA-1:cds;Parent=Msa1262290-mRNA-1 |
| chr8_2 | CDS | 64954381 | 64954495 | 64954381 | ID=Msa1262290-mRNA-1:cds;Parent=Msa1262290-mRNA-1 |
| chr8_2 | CDS | 64954162 | 64954236 | 64954162 | ID=Msa1262290-mRNA-1:cds;Parent=Msa1262290-mRNA-1 |
| chr8_2 | three_prime_UTR | 64954103 | 64954161 | 64954103 | ID=Msa1262290-mRNA-1:three_prime_utr;Parent=Msa1262290-mRNA-1 |
| chr8_2 | three_prime_UTR | 64952718 | 64953802 | 64952718 | ID=Msa1262290-mRNA-1:three_prime_utr;Parent=Msa1262290-mRNA-1 |
| chr8_2 | three_prime_UTR | 64950431 | 64951187 | 64950431 | ID=Msa1262290-mRNA-1:three_prime_utr;Parent=Msa1262290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
