Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1220360 | XP_013458482.1 | 94.497 | 527 | 28 | 1 | 1 | 526 | 1 | 527 | 0.0 | 1033 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1220360 | sp|Q9LTS3|CKX3_ARATH | 56.911 | 492 | 205 | 3 | 35 | 526 | 35 | 519 | 0.0 | 589 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0621900 | Msa1220360 | 0.927033 | 2.064085e-91 | -8.615850e-47 |
| Msa0437710 | Msa1220360 | 0.801217 | 9.992267e-49 | -8.615850e-47 |
| Msa0448550 | Msa1220360 | -0.803356 | 3.625665e-49 | -8.615850e-47 |
| Msa1220360 | Msa1265950 | 0.936810 | 9.558429e-98 | -8.615850e-47 |
| Msa1220360 | Msa1431010 | 0.925180 | 2.600785e-90 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1220360 | MtrunA17_Chr4g0071111 | 94.497 | 527 | 28 | 1 | 1 | 526 | 1 | 527 | 0.0 | 1033 |
| Msa1220360 | MtrunA17_Chr2g0299371 | 69.853 | 544 | 139 | 9 | 1 | 525 | 1 | 538 | 0.0 | 772 |
| Msa1220360 | MtrunA17_Chr4g0071121 | 57.062 | 531 | 209 | 6 | 1 | 525 | 1 | 518 | 0.0 | 621 |
| Msa1220360 | MtrunA17_Chr3g0141981 | 50.192 | 522 | 239 | 11 | 12 | 525 | 15 | 523 | 4.91e-172 | 496 |
| Msa1220360 | MtrunA17_Chr4g0020621 | 48.884 | 493 | 230 | 10 | 44 | 526 | 43 | 523 | 8.11e-164 | 475 |
| Msa1220360 | MtrunA17_Chr3g0091141 | 46.958 | 526 | 251 | 12 | 7 | 526 | 39 | 542 | 4.46e-162 | 471 |
| Msa1220360 | MtrunA17_Chr7g0257061 | 48.428 | 477 | 227 | 8 | 58 | 526 | 73 | 538 | 2.09e-160 | 467 |
| Msa1220360 | MtrunA17_Chr1g0150941 | 40.319 | 501 | 277 | 10 | 36 | 526 | 17 | 505 | 3.24e-131 | 391 |
| Msa1220360 | MtrunA17_Chr2g0299361 | 52.778 | 324 | 129 | 4 | 206 | 524 | 6 | 310 | 9.81e-120 | 354 |
| Msa1220360 | MtrunA17_Chr2g0299351 | 62.275 | 167 | 58 | 2 | 47 | 209 | 40 | 205 | 2.18e-59 | 197 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1220360 | AT5G56970.1 | 56.911 | 492 | 205 | 3 | 35 | 526 | 35 | 519 | 0.0 | 589 |
| Msa1220360 | AT4G29740.2 | 50.379 | 528 | 237 | 9 | 11 | 525 | 9 | 524 | 0.0 | 524 |
| Msa1220360 | AT1G75450.1 | 49.716 | 529 | 237 | 10 | 9 | 524 | 8 | 520 | 2.87e-180 | 518 |
| Msa1220360 | AT1G75450.2 | 49.623 | 530 | 237 | 11 | 9 | 524 | 4 | 517 | 2.60e-178 | 513 |
| Msa1220360 | AT2G19500.1 | 48.462 | 520 | 236 | 6 | 13 | 524 | 6 | 501 | 1.83e-172 | 496 |
| Msa1220360 | AT3G63440.1 | 47.379 | 477 | 235 | 6 | 58 | 526 | 60 | 528 | 1.58e-161 | 470 |
| Msa1220360 | AT2G41510.1 | 44.587 | 545 | 263 | 13 | 4 | 526 | 14 | 541 | 2.45e-161 | 471 |
| Msa1220360 | AT2G41510.2 | 44.587 | 545 | 263 | 13 | 4 | 526 | 76 | 603 | 2.87e-160 | 470 |
| Msa1220360 | AT5G56970.2 | 55.051 | 396 | 171 | 3 | 35 | 430 | 35 | 423 | 2.89e-154 | 447 |
| Msa1220360 | AT4G29740.1 | 50.231 | 432 | 191 | 8 | 11 | 430 | 9 | 428 | 3.34e-140 | 411 |
| Msa1220360 | AT5G21482.1 | 43.800 | 500 | 251 | 10 | 44 | 526 | 36 | 522 | 7.02e-140 | 414 |
| Msa1220360 | AT2G41510.3 | 45.023 | 442 | 213 | 11 | 4 | 430 | 14 | 440 | 6.63e-124 | 370 |
| Msa1220360 | AT4G29740.3 | 50.292 | 342 | 146 | 8 | 11 | 340 | 9 | 338 | 4.40e-103 | 314 |
Find 103 sgRNAs with CRISPR-Local
Find 274 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATCCAATATTTGAGATTT+TGG | 0.091010 | 8_1:+83493096 | None:intergenic |
| ACTCAAGTGGATTTGATAAT+TGG | 0.142815 | 8_1:-83492785 | Msa1220360:CDS |
| AGAGGATCTCCAATTATTTA+TGG | 0.156095 | 8_1:+83493749 | None:intergenic |
| ATGGACTTGCACCTGTTTCT+TGG | 0.217615 | 8_1:-83496822 | Msa1220360:CDS |
| GGTATAGAGTTTGTTGGATA+TGG | 0.264645 | 8_1:+83497182 | None:intergenic |
| GTTATTAAAGAAGCTATTCT+AGG | 0.268705 | 8_1:+83493702 | None:intergenic |
| CTTGGAGGTTTAGGACAATT+TGG | 0.270154 | 8_1:-83495279 | Msa1220360:CDS |
| AGTTATTAGTAGTATGAAAT+AGG | 0.276115 | 8_1:+83497284 | None:intergenic |
| CACTAAATGGAAGAGTTTCT+TGG | 0.279225 | 8_1:-83492646 | Msa1220360:CDS |
| CATACCAAAATCTCAAATAT+TGG | 0.281178 | 8_1:-83493100 | Msa1220360:CDS |
| GATTAACCGTTCCTGATCTT+TGG | 0.286822 | 8_1:+83493830 | None:intergenic |
| CACGCGGTTCTTGGAGGTTT+AGG | 0.307047 | 8_1:-83495288 | Msa1220360:CDS |
| AACAAGGCTCCATAAATAAT+TGG | 0.334966 | 8_1:-83493758 | Msa1220360:CDS |
| GAGTTATATCACGCGGTTCT+TGG | 0.336072 | 8_1:-83495297 | Msa1220360:CDS |
| TGGACTTCATTATGAGAAAA+AGG | 0.342313 | 8_1:-83493220 | Msa1220360:CDS |
| AAAATTGCTTCTAGTGACTA+TGG | 0.343388 | 8_1:-83497144 | Msa1220360:CDS |
| TGATCAGCAATCCGAGAAAA+TGG | 0.346818 | 8_1:-83493637 | Msa1220360:CDS |
| AATCACCAACGTTCATGAAT+TGG | 0.351836 | 8_1:-83496719 | Msa1220360:CDS |
| CTTTCCAATGCTGGAATTAG+TGG | 0.355413 | 8_1:-83496766 | Msa1220360:CDS |
| GTCTTTGAACACCCTTTGAT+TGG | 0.390776 | 8_1:-83496907 | Msa1220360:CDS |
| ATAATGAAGTCCAGGGATAT+AGG | 0.394085 | 8_1:+83493230 | None:intergenic |
| TCTTCTTGTGTGCTGTGGTT+AGG | 0.411365 | 8_1:+83492687 | None:intergenic |
| ATTGGTTACTATGTTGATGT+TGG | 0.419823 | 8_1:-83496889 | Msa1220360:CDS |
| AGTGGTCAGACGTTTCTTTA+CGG | 0.421013 | 8_1:-83496748 | Msa1220360:CDS |
| GCAGTAGATAATGCTGTGTT+TGG | 0.425996 | 8_1:+83493680 | None:intergenic |
| ATGTTGGAGGAGAACAACTA+TGG | 0.426776 | 8_1:-83496873 | Msa1220360:CDS |
| AGATAATCAGTCCAAGAAAC+AGG | 0.436827 | 8_1:+83496811 | None:intergenic |
| TCATGAACGTTGGTGATTTG+AGG | 0.440824 | 8_1:+83496724 | None:intergenic |
| TTCCTACGGTGGATATCAAA+CGG | 0.445255 | 8_1:+83497256 | None:intergenic |
| CATAATATGTAGCAAATTCA+AGG | 0.448202 | 8_1:+83493658 | None:intergenic |
| AGTCATGGCTTGTCCATTAG+TGG | 0.449428 | 8_1:+83496993 | None:intergenic |
| TCCTACGGTGGATATCAAAC+GGG | 0.453698 | 8_1:+83497257 | None:intergenic |
| ACCACAGCACACAAGAAGAT+TGG | 0.465569 | 8_1:-83492683 | Msa1220360:CDS |
| GCTTCAGAAAACAAAGAAAA+GGG | 0.468438 | 8_1:-83496942 | Msa1220360:CDS |
| ATTATGTCTTGTATAGAAGA+TGG | 0.477377 | 8_1:+83497084 | None:intergenic |
| GTGTTAACATTGGCTAGCTC+TGG | 0.478418 | 8_1:+83497204 | None:intergenic |
| TCCAATCTTCTTGTGTGCTG+TGG | 0.478791 | 8_1:+83492682 | None:intergenic |
| AACCGTACCGCTGTGGGAGC+TGG | 0.479386 | 8_1:+83495225 | None:intergenic |
| AGCTTCAGAAAACAAAGAAA+AGG | 0.480651 | 8_1:-83496943 | Msa1220360:CDS |
| GGACAAGGTCACTCCACTAA+TGG | 0.483867 | 8_1:-83497006 | Msa1220360:CDS |
| AGTGGAGTGACCTTGTCCTC+TGG | 0.485073 | 8_1:+83497011 | None:intergenic |
| CATCACCAGTGGAACTGTCT+TGG | 0.486622 | 8_1:-83493034 | Msa1220360:CDS |
| GAACGGTTAATCTCAATCAA+TGG | 0.491339 | 8_1:-83493819 | Msa1220360:CDS |
| GGAGGAACACTTTCCAATGC+TGG | 0.491967 | 8_1:-83496775 | Msa1220360:CDS |
| TCCAGGTGATAAAATCATCC+TGG | 0.493495 | 8_1:+83492602 | None:intergenic |
| TTCTAGGATGGTCAGATTGA+GGG | 0.495813 | 8_1:+83493718 | None:intergenic |
| AGCTTCAGTCACAAGGATTG+TGG | 0.497703 | 8_1:-83493152 | Msa1220360:CDS |
| AGGGTCGGTATAGAGTTTGT+TGG | 0.497726 | 8_1:+83497176 | None:intergenic |
| GAGGATGTCTTCTACACAGT+TGG | 0.497926 | 8_1:-83492816 | Msa1220360:CDS |
| TATCTTTACCTGACGGTTGG+AGG | 0.504841 | 8_1:-83496793 | Msa1220360:CDS |
| GGTATGAATAAATTAAGCCA+TGG | 0.512499 | 8_1:+83493117 | None:intergenic |
| GCTTCAGTCACAAGGATTGT+GGG | 0.515662 | 8_1:-83493151 | Msa1220360:CDS |
| ATTCTAGGATGGTCAGATTG+AGG | 0.517004 | 8_1:+83493717 | None:intergenic |
| GATTATCTTTACCTGACGGT+TGG | 0.521491 | 8_1:-83496796 | Msa1220360:CDS |
| TGTGGGAAGTTCCTCACCCA+TGG | 0.522276 | 8_1:-83493134 | Msa1220360:CDS |
| GGTTACTATGTTGATGTTGG+AGG | 0.524528 | 8_1:-83496886 | Msa1220360:CDS |
| AAAGTGTTCCTCCAACCGTC+AGG | 0.525441 | 8_1:+83496785 | None:intergenic |
| CAACATAGTAACCAATCAAA+GGG | 0.525726 | 8_1:+83496896 | None:intergenic |
| GACTGATTATCTTTACCTGA+CGG | 0.526021 | 8_1:-83496800 | Msa1220360:CDS |
| TGGCATGTATACAGGTTAAG+TGG | 0.526926 | 8_1:-83493887 | Msa1220360:intron |
| GGACAAGCCATGACTCATGA+TGG | 0.533340 | 8_1:-83496985 | Msa1220360:CDS |
| TTAAATCCAGGTGGGACGAT+AGG | 0.539047 | 8_1:-83492860 | Msa1220360:intron |
| GTTGGATTCTTACACTCAAG+TGG | 0.539696 | 8_1:-83492798 | Msa1220360:CDS |
| TCAACATAGTAACCAATCAA+AGG | 0.543035 | 8_1:+83496895 | None:intergenic |
| GTGTAGAAGACATCCTCGTT+TGG | 0.543503 | 8_1:+83492822 | None:intergenic |
| CAGTATAACCGTACCGCTGT+GGG | 0.544610 | 8_1:+83495219 | None:intergenic |
| GTTGGATATGGTGTTAACAT+TGG | 0.546505 | 8_1:+83497194 | None:intergenic |
| CTGACCACTAATTCCAGCAT+TGG | 0.549832 | 8_1:+83496762 | None:intergenic |
| TTAACATTGGCTAGCTCTGG+TGG | 0.549917 | 8_1:+83497207 | None:intergenic |
| TTATATCACGCGGTTCTTGG+AGG | 0.553109 | 8_1:-83495294 | Msa1220360:CDS |
| GGTTAATCTCAATCAATGGA+AGG | 0.556622 | 8_1:-83493815 | Msa1220360:CDS |
| GACAATTTGGAGTTATAACA+AGG | 0.558388 | 8_1:-83495266 | Msa1220360:CDS |
| TTAAAGAAGCTATTCTAGGA+TGG | 0.561768 | 8_1:+83493706 | None:intergenic |
| GTATGAATAAATTAAGCCAT+GGG | 0.562092 | 8_1:+83493118 | None:intergenic |
| CAAGGACTAGCCTATATCCC+TGG | 0.572971 | 8_1:-83493240 | Msa1220360:CDS |
| CCAGGTGATAAAATCATCCT+GGG | 0.575746 | 8_1:+83492603 | None:intergenic |
| CCTCTGGCTGCTATAGTGAA+AGG | 0.577125 | 8_1:+83497027 | None:intergenic |
| GTTAATCTCAATCAATGGAA+GGG | 0.578188 | 8_1:-83493814 | Msa1220360:CDS |
| CATGAATTGGATGTGATCAC+TGG | 0.578924 | 8_1:-83496706 | Msa1220360:intron |
| AGATTGAGGGAAGAAATTAG+AGG | 0.583674 | 8_1:+83493731 | None:intergenic |
| GAGTTGAAGCTTCAGTCACA+AGG | 0.583991 | 8_1:-83493159 | Msa1220360:CDS |
| TACAATTCCATCATGAGTCA+TGG | 0.584996 | 8_1:+83496978 | None:intergenic |
| ACTATAGCAGCCAGAGGACA+AGG | 0.592829 | 8_1:-83497021 | Msa1220360:CDS |
| TTGTATGCAACTCTTGAACA+TGG | 0.595290 | 8_1:-83496841 | Msa1220360:CDS |
| ACAAGCACAAGTTTGATCCC+AGG | 0.598194 | 8_1:-83492620 | Msa1220360:CDS |
| CACATCCAATTCATGAACGT+TGG | 0.603837 | 8_1:+83496714 | None:intergenic |
| AATAAATTAAGCCATGGGTG+AGG | 0.606021 | 8_1:+83493123 | None:intergenic |
| GTAAACCAAGACAGTTCCAC+TGG | 0.612320 | 8_1:+83493029 | None:intergenic |
| TTCTTGAATAGAGTCCGAAG+TGG | 0.613739 | 8_1:-83493183 | Msa1220360:CDS |
| ATCCGAGAAAATGGTGGACA+AGG | 0.616362 | 8_1:-83493628 | Msa1220360:intron |
| TCAGTATAACCGTACCGCTG+TGG | 0.621950 | 8_1:+83495218 | None:intergenic |
| CTTCAGAAAACAAAGAAAAG+GGG | 0.634602 | 8_1:-83496941 | Msa1220360:CDS |
| ATTAAAAGAAACATCACCAG+TGG | 0.637357 | 8_1:-83493045 | Msa1220360:CDS |
| GAAGCTTCAACTCTCCACTT+CGG | 0.640974 | 8_1:+83493169 | None:intergenic |
| ACAATTTGGAGTTATAACAA+GGG | 0.641357 | 8_1:-83495265 | Msa1220360:CDS |
| GGGATGCTGCTAATGCAACA+AGG | 0.647362 | 8_1:-83493774 | Msa1220360:CDS |
| CCTTTCACTATAGCAGCCAG+AGG | 0.662736 | 8_1:-83497027 | Msa1220360:CDS |
| TCAGCAATCCGAGAAAATGG+TGG | 0.664644 | 8_1:-83493634 | Msa1220360:CDS |
| GAATTCAGAGTTATATCACG+CGG | 0.664876 | 8_1:-83495304 | Msa1220360:CDS |
| TGATGGAATTGTAGTTGACA+TGG | 0.672980 | 8_1:-83496968 | Msa1220360:CDS |
| TCTTCAGCCAGCTCCCACAG+CGG | 0.703638 | 8_1:-83495232 | Msa1220360:intron |
| ACCCGTTTGATATCCACCGT+AGG | 0.704257 | 8_1:-83497258 | Msa1220360:CDS |
| GTCAGCAATGATACCAAACG+AGG | 0.778680 | 8_1:-83492835 | Msa1220360:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATATATATA+TGG | + | chr8_1:83494176-83494195 | None:intergenic | 0.0% |
| !!! | ATATAATCAACTTTTTTTAA+TGG | - | chr8_1:83493596-83493615 | Msa1220360:intron | 10.0% |
| !!! | TATTTTTATCTTAAAAAGAA+AGG | - | chr8_1:83494315-83494334 | Msa1220360:intron | 10.0% |
| !!! | ATTTTTATCTTAAAAAGAAA+GGG | - | chr8_1:83494316-83494335 | Msa1220360:intron | 10.0% |
| !!! | TAAAGTTTAATTTTATCATT+GGG | - | chr8_1:83496448-83496467 | Msa1220360:intron | 10.0% |
| !!! | AAAAAATATATTTTATCTTC+TGG | + | chr8_1:83496519-83496538 | None:intergenic | 10.0% |
| !!! | ATTGTATGAGATTTTAATTA+AGG | + | chr8_1:83492834-83492853 | None:intergenic | 15.0% |
| !!! | AAATATTTCACACTAATTTT+TGG | - | chr8_1:83493340-83493359 | Msa1220360:intron | 15.0% |
| !! | AATTAAAAAATTGAAGTCTT+GGG | + | chr8_1:83493670-83493689 | None:intergenic | 15.0% |
| !!! | TCAATTTTTTAATTCAAACA+AGG | - | chr8_1:83493676-83493695 | Msa1220360:CDS | 15.0% |
| !! | ATTTAATTGAATAATAGTTG+TGG | - | chr8_1:83494499-83494518 | Msa1220360:intron | 15.0% |
| !! | TATACTTTAGTTAAAAAGTA+TGG | + | chr8_1:83494882-83494901 | None:intergenic | 15.0% |
| !! | ATATTCACAAATGAATATAT+AGG | - | chr8_1:83495186-83495205 | Msa1220360:intron | 15.0% |
| !!! | TTAAAATTAGTCATCTTTTT+AGG | - | chr8_1:83495509-83495528 | Msa1220360:intron | 15.0% |
| !!! | GTGATTTTTGAATATTTATA+TGG | + | chr8_1:83495740-83495759 | None:intergenic | 15.0% |
| !!! | AATCTTGTATTCTTTTTTTT+TGG | - | chr8_1:83495778-83495797 | Msa1220360:intron | 15.0% |
| !! | GTATACATAATTAAACAATA+CGG | + | chr8_1:83495933-83495952 | None:intergenic | 15.0% |
| !!! | AACTATTATCTTTTTCAATT+AGG | + | chr8_1:83496319-83496338 | None:intergenic | 15.0% |
| !! | CAATGATAAAATTAAACTTT+AGG | + | chr8_1:83496449-83496468 | None:intergenic | 15.0% |
| !!! | CTAAAGTTTAATTTTATCAT+TGG | - | chr8_1:83496447-83496466 | Msa1220360:intron | 15.0% |
| !!! | AATTACAATATTTTATCTCT+TGG | + | chr8_1:83496550-83496569 | None:intergenic | 15.0% |
| !! | AGTTATTAGTAGTATGAAAT+AGG | + | chr8_1:83492609-83492628 | None:intergenic | 20.0% |
| !!! | TTTTGTCACTTTTTCAAATT+TGG | - | chr8_1:83493247-83493266 | Msa1220360:CDS | 20.0% |
| !! | TTTATGCACATTTAATGTTA+TGG | + | chr8_1:83493495-83493514 | None:intergenic | 20.0% |
| !! | GAATTAAAAAATTGAAGTCT+TGG | + | chr8_1:83493671-83493690 | None:intergenic | 20.0% |
| !!! | TCTATGATATAATGGATTAT+TGG | - | chr8_1:83493717-83493736 | Msa1220360:CDS | 20.0% |
| !!! | AAGTTTTTATTTCCTTTTTG+CGG | + | chr8_1:83493755-83493774 | None:intergenic | 20.0% |
| !!! | TCTTTATTTTTCTCTCTTTA+AGG | + | chr8_1:83493980-83493999 | None:intergenic | 20.0% |
| !!! | TTTTGATATAAGTTAACTCT+CGG | + | chr8_1:83494099-83494118 | None:intergenic | 20.0% |
| !! | ATATATATATATATGGCAAC+TGG | + | chr8_1:83494169-83494188 | None:intergenic | 20.0% |
| !! | GCGAGTTTATAAATATAAAT+AGG | - | chr8_1:83495301-83495320 | Msa1220360:CDS | 20.0% |
| !!! | AAAGATGACTAATTTTAAGT+GGG | + | chr8_1:83495507-83495526 | None:intergenic | 20.0% |
| !!! | AAAAGATGACTAATTTTAAG+TGG | + | chr8_1:83495508-83495527 | None:intergenic | 20.0% |
| !! | GATAAATCATAATATATGCA+TGG | + | chr8_1:83495829-83495848 | None:intergenic | 20.0% |
| !!! | ATCTTGTATTCTAATTTTGA+CGG | - | chr8_1:83495878-83495897 | Msa1220360:intron | 20.0% |
| !! | TTAGTATAAGACATTAGTAA+TGG | - | chr8_1:83495969-83495988 | Msa1220360:intron | 20.0% |
| !! | ATTAAAGAAAATCCAATAGA+CGG | + | chr8_1:83496290-83496309 | None:intergenic | 20.0% |
| !!! | TTCTTTTTCTTTGTTTATGT+AGG | - | chr8_1:83496610-83496629 | Msa1220360:intron | 20.0% |
| !!! | AAATCCAATATTTGAGATTT+TGG | + | chr8_1:83496797-83496816 | None:intergenic | 20.0% |
| !!! | CAAATATTGGATTTTAATTC+AGG | - | chr8_1:83496803-83496822 | Msa1220360:CDS | 20.0% |
| !! | ATTACATGAAATTTAAATCC+AGG | - | chr8_1:83497018-83497037 | Msa1220360:CDS | 20.0% |
| ! | GTATGAAATAGGTGAAAAAA+GGG | + | chr8_1:83492598-83492617 | None:intergenic | 25.0% |
| ! | AGTATGAAATAGGTGAAAAA+AGG | + | chr8_1:83492599-83492618 | None:intergenic | 25.0% |
| !!! | AAGCAATTTTGATGGTTTTA+GGG | + | chr8_1:83492736-83492755 | None:intergenic | 25.0% |
| ! | ATTATGTCTTGTATAGAAGA+TGG | + | chr8_1:83492809-83492828 | None:intergenic | 25.0% |
| !!! | TTAGATTTTTCAATACTGTG+AGG | + | chr8_1:83493447-83493466 | None:intergenic | 25.0% |
| ! | AATGGTAAATGTTAGTTGTT+AGG | - | chr8_1:83493614-83493633 | Msa1220360:intron | 25.0% |
| !! | TTAATTTTTCCTCTTTTGTC+TGG | - | chr8_1:83493637-83493656 | Msa1220360:CDS | 25.0% |
| !! | TAATTTTTCCTCTTTTGTCT+GGG | - | chr8_1:83493638-83493657 | Msa1220360:CDS | 25.0% |
| ! | TAATCCATTATATCATAGAG+AGG | + | chr8_1:83493716-83493735 | None:intergenic | 25.0% |
| ! | ATTTGTATTTCTCTCTCTTA+AGG | + | chr8_1:83493877-83493896 | None:intergenic | 25.0% |
| ! | TTAAGGTTATCGCTAAAATT+GGG | + | chr8_1:83494075-83494094 | None:intergenic | 25.0% |
| !! | TTTAAGGTTATCGCTAAAAT+TGG | + | chr8_1:83494076-83494095 | None:intergenic | 25.0% |
| ! | AATAATTATTTCAGTCAGCA+TGG | - | chr8_1:83494381-83494400 | Msa1220360:intron | 25.0% |
| ! | CTTAAGAAATTACTAAGAAG+CGG | - | chr8_1:83494410-83494429 | Msa1220360:intron | 25.0% |
| !! | ACAATTTGGAGTTATAACAA+GGG | - | chr8_1:83494625-83494644 | Msa1220360:intron | 25.0% |
| ! | TATATATATGATCGACAACT+AGG | + | chr8_1:83494762-83494781 | None:intergenic | 25.0% |
| !!! | ATTGGACATGTATTTTGAAA+CGG | + | chr8_1:83494823-83494842 | None:intergenic | 25.0% |
| ! | TTAACAATACTAGTAGATTG+TGG | + | chr8_1:83495099-83495118 | None:intergenic | 25.0% |
| ! | ACTAGTATTGTTAACATTCT+TGG | - | chr8_1:83495105-83495124 | Msa1220360:intron | 25.0% |
| ! | AATAGGTCAAATACATCTAA+AGG | - | chr8_1:83495318-83495337 | Msa1220360:CDS | 25.0% |
| !! | AAAACTAAAAGGACTTGTTT+GGG | + | chr8_1:83495618-83495637 | None:intergenic | 25.0% |
| !! | AAAAACTAAAAGGACTTGTT+TGG | + | chr8_1:83495617-83495636 | None:intergenic | 25.0% |
| ! | GAAACGATTCAAAAACTAAA+AGG | + | chr8_1:83495607-83495626 | None:intergenic | 25.0% |
| ! | CTTATTATAGATAGCATAGT+TGG | - | chr8_1:83495433-83495452 | Msa1220360:intron | 25.0% |
| ! | GAAACGATTCAAAAACTAAA+AGG | - | chr8_1:83495607-83495626 | Msa1220360:intron | 25.0% |
| !!! | TTGAGACTTTTGAAACTTAA+AGG | - | chr8_1:83495636-83495655 | Msa1220360:intron | 25.0% |
| ! | TGAAACTTAAAGGACTTATT+TGG | - | chr8_1:83495646-83495665 | Msa1220360:intron | 25.0% |
| ! | GAAACTTAAAGGACTTATTT+GGG | - | chr8_1:83495647-83495666 | Msa1220360:intron | 25.0% |
| !!! | CTTGTATTCTTTTTTTTTGG+TGG | - | chr8_1:83495781-83495800 | Msa1220360:intron | 25.0% |
| !! | ACATTAGTAATGGTGAATTT+TGG | - | chr8_1:83495979-83495998 | Msa1220360:intron | 25.0% |
| ! | GTTATTAAAGAAGCTATTCT+AGG | + | chr8_1:83496191-83496210 | None:intergenic | 25.0% |
| ! | CATAATATGTAGCAAATTCA+AGG | + | chr8_1:83496235-83496254 | None:intergenic | 25.0% |
| ! | GTATGAATAAATTAAGCCAT+GGG | + | chr8_1:83496775-83496794 | None:intergenic | 25.0% |
| ! | CATACCAAAATCTCAAATAT+TGG | - | chr8_1:83496790-83496809 | Msa1220360:CDS | 25.0% |
| !!! | TTTTAATTCAGGTGTATTCA+AGG | - | chr8_1:83496814-83496833 | Msa1220360:CDS | 25.0% |
| !!! | CTTACTTTGTTTTATTCATG+GGG | + | chr8_1:83496886-83496905 | None:intergenic | 25.0% |
| !!! | GCTTACTTTGTTTTATTCAT+GGG | + | chr8_1:83496887-83496906 | None:intergenic | 25.0% |
| !! | GAAGATTGGAAAAAACATTT+TGG | - | chr8_1:83497221-83497240 | Msa1220360:CDS | 25.0% |
| !!! | AAAAACATTTTGGCACTAAA+TGG | - | chr8_1:83497231-83497250 | Msa1220360:CDS | 25.0% |
| !!! | AATTTTGATGGTTTTAGGGT+CGG | + | chr8_1:83492732-83492751 | None:intergenic | 30.0% |
| !! | GAAGCAATTTTGATGGTTTT+AGG | + | chr8_1:83492737-83492756 | None:intergenic | 30.0% |
| AAAATTGCTTCTAGTGACTA+TGG | - | chr8_1:83492746-83492765 | Msa1220360:CDS | 30.0% | |
| ATGGATGAAAAACTGCTATT+GGG | + | chr8_1:83492790-83492809 | None:intergenic | 30.0% | |
| AGCTTCAGAAAACAAAGAAA+AGG | - | chr8_1:83492947-83492966 | Msa1220360:intron | 30.0% | |
| GCTTCAGAAAACAAAGAAAA+GGG | - | chr8_1:83492948-83492967 | Msa1220360:intron | 30.0% | |
| CTTCAGAAAACAAAGAAAAG+GGG | - | chr8_1:83492949-83492968 | Msa1220360:intron | 30.0% | |
| CAACATAGTAACCAATCAAA+GGG | + | chr8_1:83492997-83493016 | None:intergenic | 30.0% | |
| TCAACATAGTAACCAATCAA+AGG | + | chr8_1:83492998-83493017 | None:intergenic | 30.0% | |
| ATTGGTTACTATGTTGATGT+TGG | - | chr8_1:83493001-83493020 | Msa1220360:intron | 30.0% | |
| ! | CTTTAGTAGAGTACTACTTA+TGG | - | chr8_1:83493285-83493304 | Msa1220360:intron | 30.0% |
| TTATATCATAGAGAGGAGTT+GGG | + | chr8_1:83493709-83493728 | None:intergenic | 30.0% | |
| ATTATATCATAGAGAGGAGT+TGG | + | chr8_1:83493710-83493729 | None:intergenic | 30.0% | |
| AACTCCTCTCTATGATATAA+TGG | - | chr8_1:83493709-83493728 | Msa1220360:CDS | 30.0% | |
| TAAGGTTATCGCTAAAATTG+GGG | + | chr8_1:83494074-83494093 | None:intergenic | 30.0% | |
| ATAAGTTAACTCTCGGTTTA+AGG | + | chr8_1:83494092-83494111 | None:intergenic | 30.0% | |
| TCTTAAAAAGAAAGGGACTA+CGG | - | chr8_1:83494323-83494342 | Msa1220360:intron | 30.0% | |
| ! | ACTACGGTAATCTAAAATTG+AGG | - | chr8_1:83494339-83494358 | Msa1220360:intron | 30.0% |
| ATGCATACATCAAGAACTAA+CGG | + | chr8_1:83494450-83494469 | None:intergenic | 30.0% | |
| ! | GACAATTTGGAGTTATAACA+AGG | - | chr8_1:83494624-83494643 | Msa1220360:intron | 30.0% |
| ACAATGCACATTGCAAAAAT+TGG | + | chr8_1:83494841-83494860 | None:intergenic | 30.0% | |
| !! | CTTGGACATGTATTTTGAAA+CGG | - | chr8_1:83495044-83495063 | Msa1220360:intron | 30.0% |
| TTGTGAATATAAGCCTTTCA+CGG | + | chr8_1:83495176-83495195 | None:intergenic | 30.0% | |
| ATAGTATGAATCGTTGAATG+TGG | - | chr8_1:83495262-83495281 | Msa1220360:CDS | 30.0% | |
| GGGAAAAACGAAAAACTTAA+AGG | + | chr8_1:83495696-83495715 | None:intergenic | 30.0% | |
| !!! | TTGGGACTTTTGAAACTTAA+AGG | + | chr8_1:83495665-83495684 | None:intergenic | 30.0% |
| !! | ACTAATTTTAAGTGGGTGTT+AGG | + | chr8_1:83495500-83495519 | None:intergenic | 30.0% |
| !! | ATTAGTCATCTTTTTAGGCA+TGG | - | chr8_1:83495514-83495533 | Msa1220360:intron | 30.0% |
| ! | TTTCAAACAAGTCCTTTTAG+AGG | + | chr8_1:83495591-83495610 | None:intergenic | 30.0% |
| TGAAACTTAAATGACCACTT+TGG | - | chr8_1:83495675-83495694 | Msa1220360:intron | 30.0% | |
| GAAACTTAAATGACCACTTT+GGG | - | chr8_1:83495676-83495695 | Msa1220360:intron | 30.0% | |
| GGGAAAAACGAAAAACTTAA+AGG | - | chr8_1:83495696-83495715 | Msa1220360:intron | 30.0% | |
| ATATGGTCAAATGCATCTAA+AGG | + | chr8_1:83495723-83495742 | None:intergenic | 30.0% | |
| !! | TAGTAATGGTGAATTTTGGT+TGG | - | chr8_1:83495983-83496002 | Msa1220360:intron | 30.0% |
| GTTAATCTCAATCAATGGAA+GGG | - | chr8_1:83496076-83496095 | Msa1220360:intron | 30.0% | |
| AACAAGGCTCCATAAATAAT+TGG | - | chr8_1:83496132-83496151 | Msa1220360:intron | 30.0% | |
| AGAGGATCTCCAATTATTTA+TGG | + | chr8_1:83496144-83496163 | None:intergenic | 30.0% | |
| ! | TTAAAGAAGCTATTCTAGGA+TGG | + | chr8_1:83496187-83496206 | None:intergenic | 30.0% |
| !!! | AGCAATAACTTTTTGCTGTT+AGG | - | chr8_1:83496423-83496442 | Msa1220360:intron | 30.0% |
| TAGTCAAGATTAAACGTCTA+GGG | + | chr8_1:83496490-83496509 | None:intergenic | 30.0% | |
| ! | GAAATTGACATTTTGCTTCA+AGG | - | chr8_1:83496632-83496651 | Msa1220360:intron | 30.0% |
| ! | TTTTCTCATAATGAAGTCCA+GGG | + | chr8_1:83496670-83496689 | None:intergenic | 30.0% |
| ! | TTTTTCTCATAATGAAGTCC+AGG | + | chr8_1:83496671-83496690 | None:intergenic | 30.0% |
| TGGACTTCATTATGAGAAAA+AGG | - | chr8_1:83496670-83496689 | Msa1220360:intron | 30.0% | |
| GGTATGAATAAATTAAGCCA+TGG | + | chr8_1:83496776-83496795 | None:intergenic | 30.0% | |
| ATTAAAAGAAACATCACCAG+TGG | - | chr8_1:83496845-83496864 | Msa1220360:CDS | 30.0% | |
| !!! | GGCTTACTTTGTTTTATTCA+TGG | + | chr8_1:83496888-83496907 | None:intergenic | 30.0% |
| CAAAGTATATGGCATTTCAA+AGG | + | chr8_1:83496909-83496928 | None:intergenic | 30.0% | |
| TCATGATGACTCAAAGTATA+TGG | + | chr8_1:83496920-83496939 | None:intergenic | 30.0% | |
| ACATGAAATTTAAATCCAGG+TGG | - | chr8_1:83497021-83497040 | Msa1220360:CDS | 30.0% | |
| CATGAAATTTAAATCCAGGT+GGG | - | chr8_1:83497022-83497041 | Msa1220360:CDS | 30.0% | |
| ! | ACTCAAGTGGATTTGATAAT+TGG | - | chr8_1:83497105-83497124 | Msa1220360:CDS | 30.0% |
| !!! | TTGTTGAAGATTTTTTGTCC+AGG | + | chr8_1:83497308-83497327 | None:intergenic | 30.0% |
| ! | GTTGGATATGGTGTTAACAT+TGG | + | chr8_1:83492699-83492718 | None:intergenic | 35.0% |
| !! | GGTATAGAGTTTGTTGGATA+TGG | + | chr8_1:83492711-83492730 | None:intergenic | 35.0% |
| ! | GTCACTAGAAGCAATTTTGA+TGG | + | chr8_1:83492744-83492763 | None:intergenic | 35.0% |
| GATGGATGAAAAACTGCTAT+TGG | + | chr8_1:83492791-83492810 | None:intergenic | 35.0% | |
| TACAATTCCATCATGAGTCA+TGG | + | chr8_1:83492915-83492934 | None:intergenic | 35.0% | |
| TGATGGAATTGTAGTTGACA+TGG | - | chr8_1:83492922-83492941 | Msa1220360:intron | 35.0% | |
| TTGTATGCAACTCTTGAACA+TGG | - | chr8_1:83493049-83493068 | Msa1220360:CDS | 35.0% | |
| AGATAATCAGTCCAAGAAAC+AGG | + | chr8_1:83493082-83493101 | None:intergenic | 35.0% | |
| GACTGATTATCTTTACCTGA+CGG | - | chr8_1:83493090-83493109 | Msa1220360:CDS | 35.0% | |
| AATCACCAACGTTCATGAAT+TGG | - | chr8_1:83493171-83493190 | Msa1220360:CDS | 35.0% | |
| ATATACTCTACTCCGCAAAA+AGG | - | chr8_1:83493740-83493759 | Msa1220360:CDS | 35.0% | |
| TCTCTCTTAAGGTGTATTGT+TGG | + | chr8_1:83493866-83493885 | None:intergenic | 35.0% | |
| !! | CTCTCTTTAAGGTGTATTGT+TGG | + | chr8_1:83493969-83493988 | None:intergenic | 35.0% |
| TATGCAAGCGAAATCAACAT+GGG | - | chr8_1:83494124-83494143 | Msa1220360:intron | 35.0% | |
| GGTATGTTTGATTCAGGAAA+AGG | - | chr8_1:83494536-83494555 | Msa1220360:intron | 35.0% | |
| GAATTCAGAGTTATATCACG+CGG | - | chr8_1:83494586-83494605 | Msa1220360:intron | 35.0% | |
| !! | TAGATTTGGTGTACGTTTGT+TGG | + | chr8_1:83494739-83494758 | None:intergenic | 35.0% |
| !!! | GACATGTATTTTGAAACGGA+GGG | + | chr8_1:83495048-83495067 | None:intergenic | 35.0% |
| TAACGGTCAAAATTGTGCAT+TGG | - | chr8_1:83495003-83495022 | Msa1220360:intron | 35.0% | |
| CATATGTGAAGTGATTGACT+TGG | - | chr8_1:83495026-83495045 | Msa1220360:intron | 35.0% | |
| ATACTAGTAGATTGTGGACA+AGG | + | chr8_1:83495093-83495112 | None:intergenic | 35.0% | |
| !! | GTTTTTCGTTTTTCCCAAAG+TGG | - | chr8_1:83495349-83495368 | Msa1220360:intron | 35.0% |
| GAAACTTAAAGGACCACTTT+GGG | + | chr8_1:83495365-83495384 | None:intergenic | 35.0% | |
| TGAAACTTAAAGGACCACTT+TGG | + | chr8_1:83495366-83495385 | None:intergenic | 35.0% | |
| !! | ATCTTTTTAGGCATGGCAAA+TGG | - | chr8_1:83495521-83495540 | Msa1220360:intron | 35.0% |
| CATCATCATCATCCTCTAAA+AGG | - | chr8_1:83495576-83495595 | Msa1220360:intron | 35.0% | |
| !! | GTTTTTCGTTTTTCCCAAAG+TGG | + | chr8_1:83495349-83495368 | None:intergenic | 35.0% |
| !!! | TTTTTTTTTGGTGGTGTCCA+AGG | - | chr8_1:83495790-83495809 | Msa1220360:intron | 35.0% |
| CATAATATATGCATGGTCCA+GGG | + | chr8_1:83495822-83495841 | None:intergenic | 35.0% | |
| TCATAATATATGCATGGTCC+AGG | + | chr8_1:83495823-83495842 | None:intergenic | 35.0% | |
| TGATCTTAACTCACTTGGTA+AGG | + | chr8_1:83495851-83495870 | None:intergenic | 35.0% | |
| TACCAAGTGAGTTAAGATCA+CGG | - | chr8_1:83495851-83495870 | Msa1220360:intron | 35.0% | |
| !!! | ATTTTGGTTGGCATGTATAC+AGG | - | chr8_1:83495995-83496014 | Msa1220360:intron | 35.0% |
| !! | TTCTGCTTTTACCAAAGATC+AGG | - | chr8_1:83496049-83496068 | Msa1220360:intron | 35.0% |
| ! | CTTTTACCAAAGATCAGGAA+CGG | - | chr8_1:83496054-83496073 | Msa1220360:intron | 35.0% |
| GAACGGTTAATCTCAATCAA+TGG | - | chr8_1:83496071-83496090 | Msa1220360:intron | 35.0% | |
| GGTTAATCTCAATCAATGGA+AGG | - | chr8_1:83496075-83496094 | Msa1220360:intron | 35.0% | |
| ! | TGGAAGGGAATTGAACTTTT+TGG | - | chr8_1:83496091-83496110 | Msa1220360:intron | 35.0% |
| ! | AGGGAATTGAACTTTTTGGA+AGG | - | chr8_1:83496095-83496114 | Msa1220360:intron | 35.0% |
| !! | GGGAATTGAACTTTTTGGAA+GGG | - | chr8_1:83496096-83496115 | Msa1220360:intron | 35.0% |
| AGATTGAGGGAAGAAATTAG+AGG | + | chr8_1:83496162-83496181 | None:intergenic | 35.0% | |
| CTAGTCAAGATTAAACGTCT+AGG | + | chr8_1:83496491-83496510 | None:intergenic | 35.0% | |
| ATAATGAAGTCCAGGGATAT+AGG | + | chr8_1:83496663-83496682 | None:intergenic | 35.0% | |
| AATAAATTAAGCCATGGGTG+AGG | + | chr8_1:83496770-83496789 | None:intergenic | 35.0% | |
| !! | TTGAAGTTTTGTAGTGATGC+TGG | - | chr8_1:83497158-83497177 | Msa1220360:CDS | 35.0% |
| CACTAAATGGAAGAGTTTCT+TGG | - | chr8_1:83497244-83497263 | Msa1220360:CDS | 35.0% | |
| TTCCTACGGTGGATATCAAA+CGG | + | chr8_1:83492637-83492656 | None:intergenic | 40.0% | |
| !! | TAGCAGAGTTTTGCACTGAT+CGG | + | chr8_1:83492663-83492682 | None:intergenic | 40.0% |
| GTCTTTGAACACCCTTTGAT+TGG | - | chr8_1:83492983-83493002 | Msa1220360:intron | 40.0% | |
| GGTTACTATGTTGATGTTGG+AGG | - | chr8_1:83493004-83493023 | Msa1220360:intron | 40.0% | |
| ATGTTGGAGGAGAACAACTA+TGG | - | chr8_1:83493017-83493036 | Msa1220360:CDS | 40.0% | |
| GATTATCTTTACCTGACGGT+TGG | - | chr8_1:83493094-83493113 | Msa1220360:CDS | 40.0% | |
| CTTTCCAATGCTGGAATTAG+TGG | - | chr8_1:83493124-83493143 | Msa1220360:CDS | 40.0% | |
| AGTGGTCAGACGTTTCTTTA+CGG | - | chr8_1:83493142-83493161 | Msa1220360:CDS | 40.0% | |
| !! | TCATGAACGTTGGTGATTTG+AGG | + | chr8_1:83493169-83493188 | None:intergenic | 40.0% |
| CACATCCAATTCATGAACGT+TGG | + | chr8_1:83493179-83493198 | None:intergenic | 40.0% | |
| CATGAATTGGATGTGATCAC+TGG | - | chr8_1:83493184-83493203 | Msa1220360:CDS | 40.0% | |
| CTATGCAAGCGAAATCAACA+TGG | - | chr8_1:83494123-83494142 | Msa1220360:intron | 40.0% | |
| GAAATTACTAAGAAGCGGCA+TGG | - | chr8_1:83494415-83494434 | Msa1220360:intron | 40.0% | |
| AGTTGTGGTCATCTATCGAA+TGG | - | chr8_1:83494514-83494533 | Msa1220360:intron | 40.0% | |
| GTTGTGGTCATCTATCGAAT+GGG | - | chr8_1:83494515-83494534 | Msa1220360:intron | 40.0% | |
| CGAATGGGTATGTTTGATTC+AGG | - | chr8_1:83494530-83494549 | Msa1220360:intron | 40.0% | |
| ! | CTTGGAGGTTTAGGACAATT+TGG | - | chr8_1:83494611-83494630 | Msa1220360:intron | 40.0% |
| GATCGACAACTAGGTAGATT+TGG | + | chr8_1:83494753-83494772 | None:intergenic | 40.0% | |
| !!! | GGACATGTATTTTGAAACGG+AGG | + | chr8_1:83495047-83495066 | None:intergenic | 40.0% |
| !!! | GGACATGTATTTTGAAACGG+AGG | - | chr8_1:83495047-83495066 | Msa1220360:intron | 40.0% |
| ! | TTCGATTAGTCATCCGTGAA+AGG | - | chr8_1:83495160-83495179 | Msa1220360:intron | 40.0% |
| TGCTTCCTTGAAGTCATCTT+TGG | - | chr8_1:83495460-83495479 | Msa1220360:intron | 40.0% | |
| TGGTACCAAAGATGACTTCA+AGG | + | chr8_1:83495468-83495487 | None:intergenic | 40.0% | |
| GTCATCTTTGGTACCAAATC+TGG | - | chr8_1:83495472-83495491 | Msa1220360:intron | 40.0% | |
| !! | TTTTTAGGCATGGCAAATGG+TGG | - | chr8_1:83495524-83495543 | Msa1220360:intron | 40.0% |
| ACCAAGTGAGTTAAGATCAC+GGG | - | chr8_1:83495852-83495871 | Msa1220360:intron | 40.0% | |
| TGGCATGTATACAGGTTAAG+TGG | - | chr8_1:83496003-83496022 | Msa1220360:intron | 40.0% | |
| GATTAACCGTTCCTGATCTT+TGG | + | chr8_1:83496063-83496082 | None:intergenic | 40.0% | |
| !! | TTCTAGGATGGTCAGATTGA+GGG | + | chr8_1:83496175-83496194 | None:intergenic | 40.0% |
| !! | ATTCTAGGATGGTCAGATTG+AGG | + | chr8_1:83496176-83496195 | None:intergenic | 40.0% |
| GCAGTAGATAATGCTGTGTT+TGG | + | chr8_1:83496213-83496232 | None:intergenic | 40.0% | |
| TGATCAGCAATCCGAGAAAA+TGG | - | chr8_1:83496253-83496272 | Msa1220360:intron | 40.0% | |
| ! | TACCTTGTCCACCATTTTCT+CGG | + | chr8_1:83496267-83496286 | None:intergenic | 40.0% |
| TTCTTGAATAGAGTCCGAAG+TGG | - | chr8_1:83496707-83496726 | Msa1220360:CDS | 40.0% | |
| GTTGGATTCTTACACTCAAG+TGG | - | chr8_1:83497092-83497111 | Msa1220360:CDS | 40.0% | |
| CCAGGTGATAAAATCATCCT+GGG | + | chr8_1:83497290-83497309 | None:intergenic | 40.0% | |
| TCCAGGTGATAAAATCATCC+TGG | + | chr8_1:83497291-83497310 | None:intergenic | 40.0% | |
| TCCTACGGTGGATATCAAAC+GGG | + | chr8_1:83492636-83492655 | None:intergenic | 45.0% | |
| !! | GCACTGATCGGTTTTTCCTA+CGG | + | chr8_1:83492651-83492670 | None:intergenic | 45.0% |
| !! | TTAACATTGGCTAGCTCTGG+TGG | + | chr8_1:83492686-83492705 | None:intergenic | 45.0% |
| ! | GTGTTAACATTGGCTAGCTC+TGG | + | chr8_1:83492689-83492708 | None:intergenic | 45.0% |
| AGGGTCGGTATAGAGTTTGT+TGG | + | chr8_1:83492717-83492736 | None:intergenic | 45.0% | |
| ! | AGTCATGGCTTGTCCATTAG+TGG | + | chr8_1:83492900-83492919 | None:intergenic | 45.0% |
| ! | ATGGACTTGCACCTGTTTCT+TGG | - | chr8_1:83493068-83493087 | Msa1220360:CDS | 45.0% |
| TATCTTTACCTGACGGTTGG+AGG | - | chr8_1:83493097-83493116 | Msa1220360:CDS | 45.0% | |
| CTGACCACTAATTCCAGCAT+TGG | + | chr8_1:83493131-83493150 | None:intergenic | 45.0% | |
| GGTTCAAACCCAGACAAAAG+AGG | + | chr8_1:83493649-83493668 | None:intergenic | 45.0% | |
| GAGTTATATCACGCGGTTCT+TGG | - | chr8_1:83494593-83494612 | Msa1220360:intron | 45.0% | |
| TTATATCACGCGGTTCTTGG+AGG | - | chr8_1:83494596-83494615 | Msa1220360:intron | 45.0% | |
| CCAAGTGAGTTAAGATCACG+GGG | - | chr8_1:83495853-83495872 | Msa1220360:intron | 45.0% | |
| CAAGTGAGTTAAGATCACGG+GGG | - | chr8_1:83495854-83495873 | Msa1220360:intron | 45.0% | |
| TCAGCAATCCGAGAAAATGG+TGG | - | chr8_1:83496256-83496275 | Msa1220360:intron | 45.0% | |
| !! | ATCCGAGAAAATGGTGGACA+AGG | - | chr8_1:83496262-83496281 | Msa1220360:intron | 45.0% |
| GAAGCTTCAACTCTCCACTT+CGG | + | chr8_1:83496724-83496743 | None:intergenic | 45.0% | |
| GAGTTGAAGCTTCAGTCACA+AGG | - | chr8_1:83496731-83496750 | Msa1220360:CDS | 45.0% | |
| AGCTTCAGTCACAAGGATTG+TGG | - | chr8_1:83496738-83496757 | Msa1220360:CDS | 45.0% | |
| GCTTCAGTCACAAGGATTGT+GGG | - | chr8_1:83496739-83496758 | Msa1220360:CDS | 45.0% | |
| GTAAACCAAGACAGTTCCAC+TGG | + | chr8_1:83496864-83496883 | None:intergenic | 45.0% | |
| TTAAATCCAGGTGGGACGAT+AGG | - | chr8_1:83497030-83497049 | Msa1220360:CDS | 45.0% | |
| GTCAGCAATGATACCAAACG+AGG | - | chr8_1:83497055-83497074 | Msa1220360:CDS | 45.0% | |
| GTGTAGAAGACATCCTCGTT+TGG | + | chr8_1:83497071-83497090 | None:intergenic | 45.0% | |
| GAGGATGTCTTCTACACAGT+TGG | - | chr8_1:83497074-83497093 | Msa1220360:CDS | 45.0% | |
| TCTTCTTGTGTGCTGTGGTT+AGG | + | chr8_1:83497206-83497225 | None:intergenic | 45.0% | |
| ACCACAGCACACAAGAAGAT+TGG | - | chr8_1:83497207-83497226 | Msa1220360:CDS | 45.0% | |
| TCCAATCTTCTTGTGTGCTG+TGG | + | chr8_1:83497211-83497230 | None:intergenic | 45.0% | |
| ACAAGCACAAGTTTGATCCC+AGG | - | chr8_1:83497270-83497289 | Msa1220360:CDS | 45.0% | |
| ! | CCCAGGATGATTTTATCACC+TGG | - | chr8_1:83497287-83497306 | Msa1220360:CDS | 45.0% |
| !!! | TTAATTTGAATTAAAAAAAA+AGG | + | chr8_1:83493561-83493580 | None:intergenic | 5.0% |
| !! | TATATAATTAAAGATATTAA+CGG | - | chr8_1:83494986-83495005 | Msa1220360:intron | 5.0% |
| ACCCGTTTGATATCCACCGT+AGG | - | chr8_1:83492632-83492651 | Msa1220360:CDS | 50.0% | |
| !! | CTGATCGGTTTTTCCTACGG+TGG | + | chr8_1:83492648-83492667 | None:intergenic | 50.0% |
| CCTCTGGCTGCTATAGTGAA+AGG | + | chr8_1:83492866-83492885 | None:intergenic | 50.0% | |
| CCTTTCACTATAGCAGCCAG+AGG | - | chr8_1:83492863-83492882 | Msa1220360:intron | 50.0% | |
| ACTATAGCAGCCAGAGGACA+AGG | - | chr8_1:83492869-83492888 | Msa1220360:intron | 50.0% | |
| GGACAAGGTCACTCCACTAA+TGG | - | chr8_1:83492884-83492903 | Msa1220360:intron | 50.0% | |
| GGACAAGCCATGACTCATGA+TGG | - | chr8_1:83492905-83492924 | Msa1220360:intron | 50.0% | |
| ! | AAAGTGTTCCTCCAACCGTC+AGG | + | chr8_1:83493108-83493127 | None:intergenic | 50.0% |
| GGAGGAACACTTTCCAATGC+TGG | - | chr8_1:83493115-83493134 | Msa1220360:CDS | 50.0% | |
| CAGTATAACCGTACCGCTGT+GGG | + | chr8_1:83494674-83494693 | None:intergenic | 50.0% | |
| TCAGTATAACCGTACCGCTG+TGG | + | chr8_1:83494675-83494694 | None:intergenic | 50.0% | |
| TGGGTGTTAGGAGCCAGATT+TGG | + | chr8_1:83495488-83495507 | None:intergenic | 50.0% | |
| ATGGTCCAGGGTTCAAACCT+TGG | + | chr8_1:83495810-83495829 | None:intergenic | 50.0% | |
| CCCCGTGATCTTAACTCACT+TGG | + | chr8_1:83495856-83495875 | None:intergenic | 50.0% | |
| GGGATGCTGCTAATGCAACA+AGG | - | chr8_1:83496116-83496135 | Msa1220360:intron | 50.0% | |
| !! | GTGGACAAGGTACCGTCTAT+TGG | - | chr8_1:83496275-83496294 | Msa1220360:intron | 50.0% |
| !! | CAAGGACTAGCCTATATCCC+TGG | - | chr8_1:83496650-83496669 | Msa1220360:intron | 50.0% |
| CATCACCAGTGGAACTGTCT+TGG | - | chr8_1:83496856-83496875 | Msa1220360:CDS | 50.0% | |
| AGTGGAGTGACCTTGTCCTC+TGG | + | chr8_1:83492882-83492901 | None:intergenic | 55.0% | |
| CACGCGGTTCTTGGAGGTTT+AGG | - | chr8_1:83494602-83494621 | Msa1220360:intron | 55.0% | |
| GGTGTCCAAGGTTTGAACCC+TGG | - | chr8_1:83495802-83495821 | Msa1220360:intron | 55.0% | |
| TGTGGGAAGTTCCTCACCCA+TGG | - | chr8_1:83496756-83496775 | Msa1220360:CDS | 55.0% | |
| TGACATCCTATCGTCCCACC+TGG | + | chr8_1:83497039-83497058 | None:intergenic | 55.0% | |
| TCTTCAGCCAGCTCCCACAG+CGG | - | chr8_1:83494658-83494677 | Msa1220360:intron | 60.0% | |
| AGCCAGCTCCCACAGCGGTA+CGG | - | chr8_1:83494663-83494682 | Msa1220360:intron | 65.0% | |
| AACCGTACCGCTGTGGGAGC+TGG | + | chr8_1:83494668-83494687 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 83492581 | 83497331 | 83492581 | ID=Msa1220360;Name=Msa1220360 |
| chr8_1 | mRNA | 83492581 | 83497331 | 83492581 | ID=Msa1220360-mRNA-1;Parent=Msa1220360;Name=Msa1220360-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|1|0.6|1|1|1|5|0|526 |
| chr8_1 | exon | 83496707 | 83497331 | 83496707 | ID=Msa1220360-mRNA-1:exon:29965;Parent=Msa1220360-mRNA-1 |
| chr8_1 | exon | 83495233 | 83495360 | 83495233 | ID=Msa1220360-mRNA-1:exon:29964;Parent=Msa1220360-mRNA-1 |
| chr8_1 | exon | 83493629 | 83493895 | 83493629 | ID=Msa1220360-mRNA-1:exon:29963;Parent=Msa1220360-mRNA-1 |
| chr8_1 | exon | 83493012 | 83493280 | 83493012 | ID=Msa1220360-mRNA-1:exon:29962;Parent=Msa1220360-mRNA-1 |
| chr8_1 | exon | 83492581 | 83492872 | 83492581 | ID=Msa1220360-mRNA-1:exon:29961;Parent=Msa1220360-mRNA-1 |
| chr8_1 | CDS | 83496707 | 83497331 | 83496707 | ID=Msa1220360-mRNA-1:cds;Parent=Msa1220360-mRNA-1 |
| chr8_1 | CDS | 83495233 | 83495360 | 83495233 | ID=Msa1220360-mRNA-1:cds;Parent=Msa1220360-mRNA-1 |
| chr8_1 | CDS | 83493629 | 83493895 | 83493629 | ID=Msa1220360-mRNA-1:cds;Parent=Msa1220360-mRNA-1 |
| chr8_1 | CDS | 83493012 | 83493280 | 83493012 | ID=Msa1220360-mRNA-1:cds;Parent=Msa1220360-mRNA-1 |
| chr8_1 | CDS | 83492581 | 83492872 | 83492581 | ID=Msa1220360-mRNA-1:cds;Parent=Msa1220360-mRNA-1 |
| Gene Sequence |
| Protein sequence |
