Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1221770 | XP_003610185.1 | 99.451 | 182 | 1 | 0 | 1 | 182 | 1 | 182 | 4.22e-130 | 372 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1221770 | sp|Q96361|ARF1_BRARP | 92.308 | 182 | 14 | 0 | 1 | 182 | 1 | 182 | 1.49e-126 | 356 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1221770 | G7JD44 | 99.451 | 182 | 1 | 0 | 1 | 182 | 1 | 182 | 2.01e-130 | 372 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0077390 | Msa1221770 | -0.805929 | 1.052686e-49 | -8.615850e-47 |
| Msa0256500 | Msa1221770 | 0.807487 | 4.935133e-50 | -8.615850e-47 |
| Msa1221770 | Msa1289830 | 0.816438 | 5.530192e-52 | -8.615850e-47 |
| Msa1221770 | Msa1337650 | 0.828365 | 9.362295e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1221770 | MtrunA17_Chr4g0072861 | 99.451 | 182 | 1 | 0 | 1 | 182 | 1 | 182 | 3.88e-134 | 372 |
| Msa1221770 | MtrunA17_Chr6g0450081 | 63.128 | 179 | 66 | 0 | 1 | 179 | 1 | 179 | 7.27e-85 | 248 |
| Msa1221770 | MtrunA17_Chr7g0270301 | 63.128 | 179 | 66 | 0 | 1 | 179 | 1 | 179 | 1.08e-84 | 247 |
| Msa1221770 | MtrunA17_Chr5g0413451 | 63.277 | 177 | 65 | 0 | 1 | 177 | 1 | 177 | 2.48e-84 | 246 |
| Msa1221770 | MtrunA17_Chr5g0413441 | 63.277 | 177 | 65 | 0 | 1 | 177 | 1 | 177 | 2.48e-84 | 246 |
| Msa1221770 | MtrunA17_Chr1g0194261 | 63.277 | 177 | 65 | 0 | 1 | 177 | 1 | 177 | 4.58e-84 | 246 |
| Msa1221770 | MtrunA17_Chr5g0401761 | 56.425 | 179 | 78 | 0 | 1 | 179 | 1 | 179 | 1.72e-76 | 226 |
| Msa1221770 | MtrunA17_Chr5g0395631 | 58.427 | 178 | 74 | 0 | 1 | 178 | 1 | 178 | 2.71e-75 | 224 |
| Msa1221770 | MtrunA17_Chr4g0039591 | 56.742 | 178 | 77 | 0 | 1 | 178 | 1 | 178 | 2.32e-71 | 214 |
| Msa1221770 | MtrunA17_Chr5g0395641 | 53.333 | 180 | 82 | 1 | 1 | 178 | 1 | 180 | 6.61e-69 | 207 |
| Msa1221770 | MtrunA17_Chr1g0188111 | 48.851 | 174 | 89 | 0 | 1 | 174 | 1 | 174 | 4.69e-61 | 187 |
| Msa1221770 | MtrunA17_Chr8g0373271 | 48.466 | 163 | 81 | 3 | 19 | 179 | 18 | 179 | 9.51e-48 | 154 |
| Msa1221770 | MtrunA17_Chr5g0401071 | 36.813 | 182 | 112 | 2 | 1 | 179 | 1 | 182 | 1.29e-35 | 122 |
| Msa1221770 | MtrunA17_Chr2g0287721 | 35.135 | 185 | 107 | 2 | 4 | 178 | 4 | 185 | 4.36e-35 | 122 |
| Msa1221770 | MtrunA17_Chr5g0434561 | 34.940 | 166 | 107 | 1 | 9 | 173 | 11 | 176 | 4.34e-30 | 108 |
| Msa1221770 | MtrunA17_Chr4g0012371 | 34.783 | 161 | 104 | 1 | 20 | 179 | 3 | 163 | 7.37e-30 | 107 |
| Msa1221770 | MtrunA17_Chr5g0395651 | 61.538 | 78 | 28 | 1 | 1 | 76 | 1 | 78 | 3.92e-29 | 103 |
| Msa1221770 | MtrunA17_Chr2g0294701 | 34.659 | 176 | 103 | 1 | 15 | 178 | 18 | 193 | 4.59e-29 | 106 |
| Msa1221770 | MtrunA17_Chr7g0271761 | 33.523 | 176 | 105 | 1 | 15 | 178 | 18 | 193 | 1.30e-28 | 105 |
| Msa1221770 | MtrunA17_Chr4g0068171 | 34.659 | 176 | 103 | 1 | 15 | 178 | 18 | 193 | 1.47e-27 | 102 |
| Msa1221770 | MtrunA17_Chr5g0395671 | 55.319 | 47 | 21 | 0 | 132 | 178 | 44 | 90 | 5.91e-11 | 56.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1221770 | AT2G24765.1 | 91.758 | 182 | 15 | 0 | 1 | 182 | 1 | 182 | 6.32e-127 | 354 |
| Msa1221770 | AT2G24765.2 | 92.969 | 128 | 9 | 0 | 1 | 128 | 1 | 128 | 2.44e-87 | 253 |
| Msa1221770 | AT5G14670.2 | 62.570 | 179 | 67 | 0 | 1 | 179 | 1 | 179 | 7.45e-84 | 245 |
| Msa1221770 | AT5G14670.3 | 62.570 | 179 | 67 | 0 | 1 | 179 | 1 | 179 | 7.45e-84 | 245 |
| Msa1221770 | AT1G10630.1 | 62.570 | 179 | 67 | 0 | 1 | 179 | 1 | 179 | 8.04e-84 | 245 |
| Msa1221770 | AT1G10630.2 | 62.570 | 179 | 67 | 0 | 1 | 179 | 1 | 179 | 8.04e-84 | 245 |
| Msa1221770 | AT5G14670.1 | 62.570 | 179 | 67 | 0 | 1 | 179 | 1 | 179 | 1.53e-83 | 245 |
| Msa1221770 | AT2G47170.2 | 62.570 | 179 | 67 | 0 | 1 | 179 | 1 | 179 | 2.25e-83 | 244 |
| Msa1221770 | AT2G47170.1 | 62.570 | 179 | 67 | 0 | 1 | 179 | 1 | 179 | 2.25e-83 | 244 |
| Msa1221770 | AT2G47170.3 | 62.570 | 179 | 67 | 0 | 1 | 179 | 1 | 179 | 2.25e-83 | 244 |
| Msa1221770 | AT1G23490.1 | 62.712 | 177 | 66 | 0 | 1 | 177 | 1 | 177 | 3.53e-83 | 244 |
| Msa1221770 | AT1G70490.2 | 62.712 | 177 | 66 | 0 | 1 | 177 | 1 | 177 | 3.53e-83 | 244 |
| Msa1221770 | AT1G70490.7 | 62.712 | 177 | 66 | 0 | 1 | 177 | 1 | 177 | 3.53e-83 | 244 |
| Msa1221770 | AT1G70490.4 | 62.712 | 177 | 66 | 0 | 1 | 177 | 1 | 177 | 3.53e-83 | 244 |
| Msa1221770 | AT1G70490.3 | 62.712 | 177 | 66 | 0 | 1 | 177 | 1 | 177 | 3.53e-83 | 244 |
| Msa1221770 | AT1G70490.1 | 62.712 | 177 | 66 | 0 | 1 | 177 | 1 | 177 | 3.53e-83 | 244 |
| Msa1221770 | AT1G70490.6 | 62.712 | 177 | 66 | 0 | 1 | 177 | 1 | 177 | 3.53e-83 | 244 |
| Msa1221770 | AT1G70490.5 | 62.712 | 177 | 66 | 0 | 1 | 177 | 1 | 177 | 3.53e-83 | 244 |
| Msa1221770 | AT3G62290.3 | 62.712 | 177 | 66 | 0 | 1 | 177 | 1 | 177 | 6.73e-83 | 243 |
| Msa1221770 | AT3G62290.1 | 62.712 | 177 | 66 | 0 | 1 | 177 | 1 | 177 | 6.73e-83 | 243 |
| Msa1221770 | AT3G62290.2 | 62.712 | 177 | 66 | 0 | 1 | 177 | 1 | 177 | 6.73e-83 | 243 |
| Msa1221770 | AT5G17060.2 | 56.180 | 178 | 78 | 0 | 1 | 178 | 1 | 178 | 1.76e-73 | 219 |
| Msa1221770 | AT5G17060.1 | 56.180 | 178 | 78 | 0 | 1 | 178 | 1 | 178 | 1.76e-73 | 219 |
| Msa1221770 | AT3G03120.1 | 56.742 | 178 | 77 | 0 | 1 | 178 | 1 | 178 | 2.98e-72 | 216 |
| Msa1221770 | AT2G15310.1 | 56.497 | 177 | 77 | 0 | 1 | 177 | 1 | 177 | 1.19e-68 | 208 |
| Msa1221770 | AT3G22950.1 | 48.851 | 174 | 89 | 0 | 1 | 174 | 1 | 174 | 4.86e-61 | 187 |
| Msa1221770 | AT3G22950.2 | 48.851 | 174 | 89 | 0 | 1 | 174 | 1 | 174 | 4.86e-61 | 187 |
| Msa1221770 | AT3G03120.2 | 57.692 | 130 | 55 | 0 | 1 | 130 | 1 | 130 | 2.49e-53 | 166 |
| Msa1221770 | AT2G18390.1 | 47.853 | 163 | 82 | 3 | 19 | 179 | 18 | 179 | 7.48e-47 | 152 |
| Msa1221770 | AT1G02430.1 | 35.676 | 185 | 105 | 5 | 1 | 173 | 1 | 183 | 1.16e-38 | 131 |
| Msa1221770 | AT1G02440.1 | 32.432 | 185 | 111 | 5 | 1 | 173 | 1 | 183 | 1.68e-35 | 123 |
| Msa1221770 | AT3G49870.1 | 35.714 | 182 | 114 | 2 | 1 | 179 | 1 | 182 | 2.96e-35 | 122 |
| Msa1221770 | AT5G67560.1 | 35.294 | 170 | 109 | 1 | 11 | 179 | 13 | 182 | 5.37e-34 | 119 |
| Msa1221770 | AT3G49870.2 | 36.478 | 159 | 100 | 1 | 22 | 179 | 5 | 163 | 5.96e-33 | 115 |
| Msa1221770 | AT5G52210.1 | 32.967 | 182 | 115 | 1 | 4 | 178 | 4 | 185 | 8.57e-33 | 116 |
| Msa1221770 | AT5G52210.2 | 32.967 | 182 | 115 | 1 | 4 | 178 | 4 | 185 | 8.57e-33 | 116 |
| Msa1221770 | AT3G49860.1 | 36.364 | 165 | 104 | 1 | 16 | 179 | 10 | 174 | 1.07e-32 | 115 |
| Msa1221770 | AT1G02430.2 | 34.161 | 161 | 96 | 4 | 1 | 153 | 1 | 159 | 4.17e-32 | 113 |
| Msa1221770 | AT5G37680.1 | 33.735 | 166 | 109 | 1 | 9 | 173 | 11 | 176 | 2.20e-29 | 107 |
| Msa1221770 | AT4G02080.1 | 34.091 | 176 | 104 | 1 | 15 | 178 | 18 | 193 | 1.14e-28 | 105 |
| Msa1221770 | AT1G56330.1 | 34.286 | 175 | 103 | 1 | 15 | 177 | 18 | 192 | 7.73e-28 | 103 |
| Msa1221770 | AT1G09180.1 | 34.659 | 176 | 103 | 1 | 15 | 178 | 18 | 193 | 8.52e-28 | 103 |
| Msa1221770 | AT3G62560.1 | 33.714 | 175 | 104 | 1 | 15 | 177 | 18 | 192 | 1.09e-27 | 103 |
| Msa1221770 | AT5G37680.2 | 35.156 | 128 | 83 | 0 | 46 | 173 | 2 | 129 | 1.26e-24 | 93.6 |
| Msa1221770 | AT1G02440.2 | 27.922 | 154 | 75 | 4 | 1 | 153 | 1 | 119 | 2.07e-20 | 82.4 |
Find 74 sgRNAs with CRISPR-Local
Find 379 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGATTATTGCTTGAGTATT+TGG | 0.102072 | 8_1:-85668863 | None:intergenic |
| AAATTTCAAGTTTGGGATTT+AGG | 0.151990 | 8_1:+85666357 | Msa1221770:CDS |
| TAAGGTTAGGTTTCGGAATT+TGG | 0.164196 | 8_1:-85665726 | None:intergenic |
| TTTAAAACTTCTGCTATAAA+AGG | 0.186926 | 8_1:+85670281 | Msa1221770:CDS |
| ACAACATTAAATTTCAAGTT+TGG | 0.228412 | 8_1:+85666349 | Msa1221770:CDS |
| TTTCAGGAAGAAGAACTAAA+AGG | 0.299609 | 8_1:+85669934 | Msa1221770:intron |
| GTGATGCGATTGAAGGATTA+AGG | 0.301293 | 8_1:-85665744 | None:intergenic |
| TTCTTTGATTATACTGAAAT+CGG | 0.304748 | 8_1:-85665805 | None:intergenic |
| CGATGATGAGAATCAGGATT+TGG | 0.321141 | 8_1:-85665686 | None:intergenic |
| GGAGGAGTTCCATGCAATTC+TGG | 0.326352 | 8_1:+85668928 | Msa1221770:CDS |
| CAACATTAAATTTCAAGTTT+GGG | 0.328587 | 8_1:+85666350 | Msa1221770:CDS |
| TGAGAATCAGGATTTGGATT+TGG | 0.329441 | 8_1:-85665680 | None:intergenic |
| TTGAACCCCATGTAGCAATA+AGG | 0.356498 | 8_1:-85671942 | None:intergenic |
| GGAAAGTAACACCTCCAATA+TGG | 0.374802 | 8_1:-85668842 | None:intergenic |
| TTTAGATCGATTGGTGAATT+CGG | 0.406570 | 8_1:+85671670 | Msa1221770:three_prime_UTR |
| ACGAAACGATGATGAGAATC+AGG | 0.409319 | 8_1:-85665692 | None:intergenic |
| TAATCCCTCTGCTGCCGAAT+CGG | 0.415016 | 8_1:+85665874 | Msa1221770:five_prime_UTR |
| TAGATATAATTTAGATCGAT+TGG | 0.417779 | 8_1:+85671661 | Msa1221770:three_prime_UTR |
| TTGATTCAAGTGACACTGAT+AGG | 0.424944 | 8_1:+85668891 | Msa1221770:CDS |
| GAAGGATTAAGGTTAGGTTT+CGG | 0.427371 | 8_1:-85665733 | None:intergenic |
| TTGAGCAATACACTCAAATC+TGG | 0.428240 | 8_1:+85671608 | Msa1221770:CDS |
| ATCCTAACCTTATTGCTACA+TGG | 0.433605 | 8_1:+85671935 | Msa1221770:three_prime_UTR |
| GCGATTGAAGGATTAAGGTT+AGG | 0.434583 | 8_1:-85665739 | None:intergenic |
| CTGATAGGCTTGTGATAGCT+AGG | 0.436345 | 8_1:+85668906 | Msa1221770:CDS |
| GATTAGAACATGAATGAATC+AGG | 0.449805 | 8_1:-85665850 | None:intergenic |
| TCTGCTGCCGAATCGGAAGA+TGG | 0.472634 | 8_1:+85665881 | Msa1221770:exon |
| CAGGTGGGCAAACAAGTATC+AGG | 0.480395 | 8_1:+85667757 | Msa1221770:intron |
| GTTTGTGTAATCGAGCTACA+TGG | 0.483918 | 8_1:+85671886 | Msa1221770:three_prime_UTR |
| TGAATCAGGTGCAAACGATT+CGG | 0.485702 | 8_1:-85665836 | None:intergenic |
| TCCTAACCTTATTGCTACAT+GGG | 0.488470 | 8_1:+85671936 | Msa1221770:three_prime_UTR |
| ATGAAGAAGCATACATAGAA+TGG | 0.499743 | 8_1:-85665994 | None:intergenic |
| GAAGCTCGAATTCTCGTTCT+CGG | 0.503966 | 8_1:+85665948 | Msa1221770:CDS |
| ACTAATCCCATCTTCCGATT+CGG | 0.506920 | 8_1:-85665888 | None:intergenic |
| CCCCATGTAGCAATAAGGTT+AGG | 0.511308 | 8_1:-85671937 | None:intergenic |
| CTGCTGCCGAATCGGAAGAT+GGG | 0.515413 | 8_1:+85665882 | Msa1221770:exon |
| AAGCAGAAGCGAAGAGAGGA+AGG | 0.520182 | 8_1:-85665771 | None:intergenic |
| GATTATTTGATACAGCGATC+GGG | 0.525019 | 8_1:+85666301 | Msa1221770:intron |
| TTGTCCATAGGCCATATTGG+AGG | 0.528609 | 8_1:+85668831 | Msa1221770:intron |
| TTTGTGTAATCGAGCTACAT+GGG | 0.528801 | 8_1:+85671887 | Msa1221770:three_prime_UTR |
| CCGTCACTGCAGCATCATCA+AGG | 0.530798 | 8_1:-85670214 | None:intergenic |
| CCTTGATGATGCTGCAGTGA+CGG | 0.531460 | 8_1:+85670214 | Msa1221770:CDS |
| GATCGATTGGTGAATTCGGA+AGG | 0.531645 | 8_1:+85671674 | Msa1221770:three_prime_UTR |
| TGACTGAAAGGTGGAGAAGA+GGG | 0.535231 | 8_1:+85665648 | None:intergenic |
| TCCATTATGCAGGATCTACC+AGG | 0.537332 | 8_1:+85670188 | Msa1221770:intron |
| AGGTTTCGGAATTTGGAAGA+GGG | 0.540706 | 8_1:-85665719 | None:intergenic |
| GCAGCATCATCAAGGGCGCC+TGG | 0.541314 | 8_1:-85670206 | None:intergenic |
| GGTTTCGGAATTTGGAAGAG+GGG | 0.544409 | 8_1:-85665718 | None:intergenic |
| ATCTTCCGATTCGGCAGCAG+AGG | 0.544864 | 8_1:-85665879 | None:intergenic |
| AGGGCATGTGATGCGATTGA+AGG | 0.545871 | 8_1:-85665751 | None:intergenic |
| TAGGTTTCGGAATTTGGAAG+AGG | 0.561849 | 8_1:-85665720 | None:intergenic |
| CATATACCTCCAGAATTGCA+TGG | 0.565860 | 8_1:-85668937 | None:intergenic |
| ACTTCTGCTATAAAAGGCGA+AGG | 0.577101 | 8_1:+85670287 | Msa1221770:CDS |
| TCAAATCTGGAGGTGGCTGA+AGG | 0.580655 | 8_1:+85671621 | Msa1221770:CDS |
| TCGAAACTACTCTATGCAGA+GGG | 0.583764 | 8_1:-85671840 | None:intergenic |
| CGTCACTGCAGCATCATCAA+GGG | 0.584247 | 8_1:-85670213 | None:intergenic |
| TGATTATACTGAAATCGGAT+CGG | 0.599932 | 8_1:-85665800 | None:intergenic |
| ATGACTGAAAGGTGGAGAAG+AGG | 0.601995 | 8_1:+85665647 | None:intergenic |
| AATACACTCAAATCTGGAGG+TGG | 0.603022 | 8_1:+85671614 | Msa1221770:CDS |
| GATCGAGTACGAACTTGGAA+TGG | 0.605389 | 8_1:-85666117 | None:intergenic |
| TCTTCCGATTCGGCAGCAGA+GGG | 0.610045 | 8_1:-85665878 | None:intergenic |
| GTTCTCGGTCTTGACAATGC+CGG | 0.612027 | 8_1:+85665963 | Msa1221770:CDS |
| TGATAGGCTTGTGATAGCTA+GGG | 0.616455 | 8_1:+85668907 | Msa1221770:CDS |
| GATTGGTGAATTCGGAAGGA+TGG | 0.616718 | 8_1:+85671678 | Msa1221770:three_prime_UTR |
| CTCAAAGCAGAAGCGAAGAG+AGG | 0.630142 | 8_1:-85665775 | None:intergenic |
| TTCGAAACTACTCTATGCAG+AGG | 0.633391 | 8_1:-85671841 | None:intergenic |
| TTGTGTAATCGAGCTACATG+GGG | 0.642122 | 8_1:+85671888 | Msa1221770:three_prime_UTR |
| CCTAACCTTATTGCTACATG+GGG | 0.647014 | 8_1:+85671937 | Msa1221770:three_prime_UTR |
| TAGATCCCATGACTGAAAGG+TGG | 0.653924 | 8_1:+85665639 | None:intergenic |
| AGCAGAAGCGAAGAGAGGAA+GGG | 0.660825 | 8_1:-85665770 | None:intergenic |
| TAGGCTTGTGATAGCTAGGG+AGG | 0.666014 | 8_1:+85668910 | Msa1221770:CDS |
| AAGAAGCATACATAGAATGG+TGG | 0.667666 | 8_1:-85665991 | None:intergenic |
| AGCAATACACTCAAATCTGG+AGG | 0.669996 | 8_1:+85671611 | Msa1221770:CDS |
| GGAGTTCCATGCAATTCTGG+AGG | 0.674172 | 8_1:+85668931 | Msa1221770:CDS |
| CGAAACTACTCTATGCAGAG+GGG | 0.752901 | 8_1:-85671839 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAGTAATAAACTATATTTTA+AGG | - | chr8_1:85667629-85667648 | None:intergenic | 10.0% |
| !! | TAGTAATTTATTTATAATGT+TGG | + | chr8_1:85668613-85668632 | Msa1221770:intron | 10.0% |
| !! | AAAATAAAAACAATATTTAC+AGG | - | chr8_1:85670547-85670566 | None:intergenic | 10.0% |
| !!! | TAAAAAGTTTTTCAAATATA+AGG | - | chr8_1:85671026-85671045 | None:intergenic | 10.0% |
| !!! | AAAAACTTTTTACAAAAAAT+GGG | + | chr8_1:85671034-85671053 | Msa1221770:intron | 10.0% |
| !!! | AAATTTTCATAAAATTTATG+CGG | + | chr8_1:85671115-85671134 | Msa1221770:intron | 10.0% |
| !! | AAAAAAAAAAGGAATAAAAT+AGG | - | chr8_1:85671748-85671767 | None:intergenic | 10.0% |
| !!! | ATCTTTGAAAAAAAAAAAAA+AGG | - | chr8_1:85671759-85671778 | None:intergenic | 10.0% |
| !!! | CTTTTTTTTTTTTTTCAGAT+CGG | + | chr8_1:85666069-85666088 | Msa1221770:intron | 15.0% |
| !!! | TGTATTTTATGTATGTTTTA+TGG | + | chr8_1:85666422-85666441 | Msa1221770:intron | 15.0% |
| !!! | CAACTTTGAAATAAAATAAA+GGG | - | chr8_1:85666678-85666697 | None:intergenic | 15.0% |
| !!! | ACAACTTTGAAATAAAATAA+AGG | - | chr8_1:85666679-85666698 | None:intergenic | 15.0% |
| !! | ATTTACTTACAAAAAATTAC+TGG | - | chr8_1:85666803-85666822 | None:intergenic | 15.0% |
| !! | ATAATAAAAGTTATTGTCAA+AGG | - | chr8_1:85667547-85667566 | None:intergenic | 15.0% |
| !! | TTAGATCATAATATCATATA+GGG | - | chr8_1:85667935-85667954 | None:intergenic | 15.0% |
| !! | ATTAGATCATAATATCATAT+AGG | - | chr8_1:85667936-85667955 | None:intergenic | 15.0% |
| !! | AAGAGTTAAGATTAAAAAAA+AGG | - | chr8_1:85667991-85668010 | None:intergenic | 15.0% |
| !!! | TTTTTTCCTAATAAAATACA+AGG | - | chr8_1:85668298-85668317 | None:intergenic | 15.0% |
| !! | AATTTACTACATATATATCA+GGG | - | chr8_1:85668779-85668798 | None:intergenic | 15.0% |
| !! | AAATTTACTACATATATATC+AGG | - | chr8_1:85668780-85668799 | None:intergenic | 15.0% |
| !! | AATTATTTATCAAACAAAAC+AGG | - | chr8_1:85669393-85669412 | None:intergenic | 15.0% |
| !! | TATAATTACCAGTAAAAATA+AGG | - | chr8_1:85669431-85669450 | None:intergenic | 15.0% |
| !! | TTAAAATAAAATCTAGTCAA+AGG | - | chr8_1:85669817-85669836 | None:intergenic | 15.0% |
| !!! | TTTCATTTTTCAGTATTTAA+AGG | + | chr8_1:85670422-85670441 | Msa1221770:intron | 15.0% |
| !!! | TAATGTTTAGCAATTTTTAT+AGG | + | chr8_1:85670655-85670674 | Msa1221770:intron | 15.0% |
| !! | GATATTAAAATTATCTGTTA+TGG | - | chr8_1:85670715-85670734 | None:intergenic | 15.0% |
| !!! | TTTGACTTTAAAGTTTTTAT+AGG | + | chr8_1:85670934-85670953 | Msa1221770:intron | 15.0% |
| !!! | GAAAAACTTTTTACAAAAAA+TGG | + | chr8_1:85671033-85671052 | Msa1221770:intron | 15.0% |
| !!! | AATTTTCATAAAATTTATGC+GGG | + | chr8_1:85671116-85671135 | Msa1221770:intron | 15.0% |
| !!! | TTTGTTTGAGATATAAAAAA+GGG | - | chr8_1:85671190-85671209 | None:intergenic | 15.0% |
| !!! | TTTTGTTTGAGATATAAAAA+AGG | - | chr8_1:85671191-85671210 | None:intergenic | 15.0% |
| !! | TATATCTCAAACAAAATTTA+AGG | + | chr8_1:85671195-85671214 | Msa1221770:intron | 15.0% |
| !! | ATATCTCAAACAAAATTTAA+GGG | + | chr8_1:85671196-85671215 | Msa1221770:intron | 15.0% |
| !! | TTCTTTGATTATACTGAAAT+CGG | - | chr8_1:85665808-85665827 | None:intergenic | 20.0% |
| !! | CGATCTGAAAAAAAAAAAAA+AGG | - | chr8_1:85666071-85666090 | None:intergenic | 20.0% |
| !!! | ACAACATTAAATTTCAAGTT+TGG | + | chr8_1:85666349-85666368 | Msa1221770:CDS | 20.0% |
| !!! | CAACATTAAATTTCAAGTTT+GGG | + | chr8_1:85666350-85666369 | Msa1221770:CDS | 20.0% |
| !! | CAAAATTTGTAAAGATAACA+TGG | - | chr8_1:85666526-85666545 | None:intergenic | 20.0% |
| !! | ATGTAAAAAACTAGCAATAA+AGG | + | chr8_1:85666722-85666741 | Msa1221770:intron | 20.0% |
| !! | ACTAATAAAACTTCTTAACT+TGG | - | chr8_1:85666996-85667015 | None:intergenic | 20.0% |
| !! | TAATTCAAAATATTGAGTAC+AGG | - | chr8_1:85667239-85667258 | None:intergenic | 20.0% |
| !! | ATGCATTAAAGAAAATAAAC+AGG | + | chr8_1:85667596-85667615 | Msa1221770:intron | 20.0% |
| !!! | ATCCAACTTTTATTTTATAC+AGG | + | chr8_1:85667738-85667757 | Msa1221770:intron | 20.0% |
| !!! | AACTTTTATTTTATACAGGT+GGG | + | chr8_1:85667742-85667761 | Msa1221770:intron | 20.0% |
| !! | TAGATCATAATATCATATAG+GGG | - | chr8_1:85667934-85667953 | None:intergenic | 20.0% |
| !! | ATTATGATCTAATTCAATTG+CGG | + | chr8_1:85667943-85667962 | Msa1221770:intron | 20.0% |
| !!! | GTTTTATTCTTCTAGATTTT+AGG | - | chr8_1:85668171-85668190 | None:intergenic | 20.0% |
| !! | TTGAAACTTCTCATTATATT+TGG | - | chr8_1:85668251-85668270 | None:intergenic | 20.0% |
| !!! | AAGAAACCTTGTATTTTATT+AGG | + | chr8_1:85668289-85668308 | Msa1221770:intron | 20.0% |
| !! | AATGTGGGAAAAAAATTATA+TGG | + | chr8_1:85668673-85668692 | Msa1221770:intron | 20.0% |
| !! | AAATAATCAAAGACAGTAAA+AGG | - | chr8_1:85668809-85668828 | None:intergenic | 20.0% |
| !!! | TTGATTATTTTTTTGTCCAT+AGG | + | chr8_1:85668819-85668838 | Msa1221770:intron | 20.0% |
| !!! | TTTGTATTCCTTATTTTTAC+TGG | + | chr8_1:85669420-85669439 | Msa1221770:intron | 20.0% |
| !!! | TAAAGGATTTGTTTACAAAA+TGG | + | chr8_1:85669486-85669505 | Msa1221770:intron | 20.0% |
| !!! | ATTACTAAGGATTCATTTTT+TGG | - | chr8_1:85669629-85669648 | None:intergenic | 20.0% |
| !! | GAAACGGATAAAAATTAATT+AGG | - | chr8_1:85669793-85669812 | None:intergenic | 20.0% |
| !!! | AAGTTTTAAAAATAGACCAT+TGG | - | chr8_1:85670271-85670290 | None:intergenic | 20.0% |
| !!! | TTTAAAACTTCTGCTATAAA+AGG | + | chr8_1:85670281-85670300 | Msa1221770:CDS | 20.0% |
| !!! | TAAAATTGAATGCTATTTCA+AGG | + | chr8_1:85670341-85670360 | Msa1221770:intron | 20.0% |
| !! | TACAAATTTCTACTTATGTA+TGG | - | chr8_1:85670604-85670623 | None:intergenic | 20.0% |
| !! | CAATTCATTTGATATAGTAT+AGG | + | chr8_1:85670750-85670769 | Msa1221770:intron | 20.0% |
| !!! | ATTTTCATAAAATTTATGCG+GGG | + | chr8_1:85671117-85671136 | Msa1221770:intron | 20.0% |
| !! | GCAAAATGTAGAAATTATTA+TGG | + | chr8_1:85671301-85671320 | Msa1221770:intron | 20.0% |
| !! | TAGATATAATTTAGATCGAT+TGG | + | chr8_1:85671661-85671680 | Msa1221770:three_prime_UTR | 20.0% |
| !! | AGATTGTTTTCATCTGTTTT+CGG | + | chr8_1:85665918-85665937 | Msa1221770:CDS | 25.0% |
| !! | ATTTTTGATACTTGCATGTA+TGG | + | chr8_1:85666255-85666274 | Msa1221770:intron | 25.0% |
| !!! | AAATTTCAAGTTTGGGATTT+AGG | + | chr8_1:85666357-85666376 | Msa1221770:CDS | 25.0% |
| !! | ATTTTGCATCATTTGATCAT+AGG | + | chr8_1:85666540-85666559 | Msa1221770:intron | 25.0% |
| !! | TTTTGCATCATTTGATCATA+GGG | + | chr8_1:85666541-85666560 | Msa1221770:intron | 25.0% |
| ! | ATTTGAAAACCATACTAGTT+TGG | - | chr8_1:85666636-85666655 | None:intergenic | 25.0% |
| !!! | GAAGTTTTATTAGTTTTTCC+CGG | + | chr8_1:85667002-85667021 | Msa1221770:intron | 25.0% |
| !!! | GTTTTAAACTTTAAGTTTGC+TGG | + | chr8_1:85667365-85667384 | Msa1221770:intron | 25.0% |
| !!! | TTGAATTTTGATATAGTGCA+AGG | + | chr8_1:85667500-85667519 | Msa1221770:intron | 25.0% |
| !!! | TGAATTTTGATATAGTGCAA+GGG | + | chr8_1:85667501-85667520 | Msa1221770:intron | 25.0% |
| ! | CACCTGTATAAAATAAAAGT+TGG | - | chr8_1:85667743-85667762 | None:intergenic | 25.0% |
| !!! | CAACTTTTATTTTATACAGG+TGG | + | chr8_1:85667741-85667760 | Msa1221770:intron | 25.0% |
| ! | GGATAGAAAAAAAATACTAC+TGG | - | chr8_1:85667913-85667932 | None:intergenic | 25.0% |
| ! | TTTACAGCTAAACAGAAATA+TGG | - | chr8_1:85668014-85668033 | None:intergenic | 25.0% |
| !! | TATCATTTTCAGAGAGAATT+AGG | - | chr8_1:85668388-85668407 | None:intergenic | 25.0% |
| !! | AATTCTCTCTGAAAATGATA+AGG | + | chr8_1:85668388-85668407 | Msa1221770:intron | 25.0% |
| !! | ATTCTCTCTGAAAATGATAA+GGG | + | chr8_1:85668389-85668408 | Msa1221770:intron | 25.0% |
| ! | AAAATGAATAAGATTGCGTT+AGG | - | chr8_1:85668528-85668547 | None:intergenic | 25.0% |
| !!! | CTTATTCATTTTTGAAACTG+CGG | + | chr8_1:85668536-85668555 | Msa1221770:intron | 25.0% |
| ! | CTAAAAGAGAAATTCATCTT+TGG | - | chr8_1:85668596-85668615 | None:intergenic | 25.0% |
| ! | TGATTAAAAGAACAAATCAC+AGG | + | chr8_1:85668704-85668723 | Msa1221770:intron | 25.0% |
| ! | TAGATTATTGCTTGAGTATT+TGG | - | chr8_1:85668866-85668885 | None:intergenic | 25.0% |
| ! | AGCTTATATTGCAATTTACA+AGG | + | chr8_1:85669056-85669075 | Msa1221770:intron | 25.0% |
| ! | GCTTATATTGCAATTTACAA+GGG | + | chr8_1:85669057-85669076 | Msa1221770:intron | 25.0% |
| !!! | TTTTTGACTGAATCTAATTC+TGG | + | chr8_1:85669311-85669330 | Msa1221770:intron | 25.0% |
| ! | AAGTGTATTTACTGTTCTAA+AGG | + | chr8_1:85669469-85669488 | Msa1221770:intron | 25.0% |
| ! | AAGAAATGAAATTGACAAGT+AGG | - | chr8_1:85669712-85669731 | None:intergenic | 25.0% |
| ! | AGAATTTGATTCATAAGTGT+TGG | + | chr8_1:85669991-85670010 | Msa1221770:intron | 25.0% |
| ! | AAATTATCTGTTATGGATAG+TGG | - | chr8_1:85670708-85670727 | None:intergenic | 25.0% |
| ! | AATAAAAATAAAGAACGCAG+AGG | + | chr8_1:85670788-85670807 | Msa1221770:intron | 25.0% |
| ! | ATAAAAATAAAGAACGCAGA+GGG | + | chr8_1:85670789-85670808 | Msa1221770:intron | 25.0% |
| !! | TTTTTAATGGGAATTAGACT+TGG | + | chr8_1:85670861-85670880 | Msa1221770:intron | 25.0% |
| ! | ATAAGGACTAAACTTATGTA+GGG | - | chr8_1:85671009-85671028 | None:intergenic | 25.0% |
| ! | TATAAGGACTAAACTTATGT+AGG | - | chr8_1:85671010-85671029 | None:intergenic | 25.0% |
| !!! | TCTCTAATTTGCTTTTATAG+GGG | - | chr8_1:85671093-85671112 | None:intergenic | 25.0% |
| !!! | GTCTCTAATTTGCTTTTATA+GGG | - | chr8_1:85671094-85671113 | None:intergenic | 25.0% |
| !!! | TGTCTCTAATTTGCTTTTAT+AGG | - | chr8_1:85671095-85671114 | None:intergenic | 25.0% |
| !! | TAAAATGCTGTGCTTTATTA+AGG | + | chr8_1:85671147-85671166 | Msa1221770:intron | 25.0% |
| ! | AAATCTCGTTCTATTACATA+GGG | - | chr8_1:85671341-85671360 | None:intergenic | 25.0% |
| ! | TAAATCTCGTTCTATTACAT+AGG | - | chr8_1:85671342-85671361 | None:intergenic | 25.0% |
| ! | TTACGTTGTGTAGTTATTAA+TGG | + | chr8_1:85671431-85671450 | Msa1221770:intron | 25.0% |
| ! | TACGTTGTGTAGTTATTAAT+GGG | + | chr8_1:85671432-85671451 | Msa1221770:intron | 25.0% |
| ! | TCAACCTACATATTAACATT+TGG | - | chr8_1:85671592-85671611 | None:intergenic | 25.0% |
| TGATTATACTGAAATCGGAT+CGG | - | chr8_1:85665803-85665822 | None:intergenic | 30.0% | |
| GATTAGAACATGAATGAATC+AGG | - | chr8_1:85665853-85665872 | None:intergenic | 30.0% | |
| ! | ATGAAGAAGCATACATAGAA+TGG | - | chr8_1:85665997-85666016 | None:intergenic | 30.0% |
| TGATTATTTGATACAGCGAT+CGG | + | chr8_1:85666300-85666319 | Msa1221770:intron | 30.0% | |
| CTCAACAAGGAAAGATAATA+CGG | - | chr8_1:85666499-85666518 | None:intergenic | 30.0% | |
| ATAACATGGTAATCTCAACA+AGG | - | chr8_1:85666512-85666531 | None:intergenic | 30.0% | |
| ATCATTTGATCATAGGGATA+AGG | + | chr8_1:85666547-85666566 | Msa1221770:intron | 30.0% | |
| TTACAAAAAATTACTGGTGC+TGG | - | chr8_1:85666797-85666816 | None:intergenic | 30.0% | |
| TTGCATATCTTAATGACTTG+TGG | + | chr8_1:85666940-85666959 | Msa1221770:intron | 30.0% | |
| ! | TGCATATCTTAATGACTTGT+GGG | + | chr8_1:85666941-85666960 | Msa1221770:intron | 30.0% |
| ! | ATTCCTACCTCTAAGAAAAA+AGG | - | chr8_1:85667039-85667058 | None:intergenic | 30.0% |
| GAGCTTGAGGAAAAAAAAAT+GGG | - | chr8_1:85667131-85667150 | None:intergenic | 30.0% | |
| TGAGCTTGAGGAAAAAAAAA+TGG | - | chr8_1:85667132-85667151 | None:intergenic | 30.0% | |
| AAAAACAGTGGTTGTTGTAT+AGG | - | chr8_1:85667205-85667224 | None:intergenic | 30.0% | |
| TAAATACTAGCAAGCATACA+TGG | + | chr8_1:85667336-85667355 | Msa1221770:intron | 30.0% | |
| AAATACTAGCAAGCATACAT+GGG | + | chr8_1:85667337-85667356 | Msa1221770:intron | 30.0% | |
| ATTAGAAATTGAAACAAGCC+AGG | - | chr8_1:85667718-85667737 | None:intergenic | 30.0% | |
| !! | TTACTTTTACAACGAATAGC+TGG | + | chr8_1:85667860-85667879 | Msa1221770:intron | 30.0% |
| TACTAGAAATACACACATCA+AGG | - | chr8_1:85668051-85668070 | None:intergenic | 30.0% | |
| ACAATCTCATGTGATATTGT+AGG | + | chr8_1:85668218-85668237 | Msa1221770:intron | 30.0% | |
| TCATGTGATATTGTAGGTTA+AGG | + | chr8_1:85668224-85668243 | Msa1221770:intron | 30.0% | |
| TCAGAGAGAATTAGGAAATT+TGG | - | chr8_1:85668380-85668399 | None:intergenic | 30.0% | |
| GAATGTTGCCTATAAACAAA+AGG | - | chr8_1:85668433-85668452 | None:intergenic | 30.0% | |
| ACACACTTCATTTACAACTT+TGG | + | chr8_1:85668995-85669014 | Msa1221770:intron | 30.0% | |
| TATTGCAATTTACAAGGGAT+TGG | + | chr8_1:85669062-85669081 | Msa1221770:intron | 30.0% | |
| GACAATGCATAATATATGCA+AGG | + | chr8_1:85669158-85669177 | Msa1221770:intron | 30.0% | |
| ! | AAGCTTCACGTAATCTATTT+TGG | - | chr8_1:85669209-85669228 | None:intergenic | 30.0% |
| GTACTATAGAAGAATGATGT+AGG | + | chr8_1:85669244-85669263 | Msa1221770:intron | 30.0% | |
| !! | TAGGTGTTGTTTGTGATTAT+AGG | + | chr8_1:85669263-85669282 | Msa1221770:intron | 30.0% |
| AAACTAATTCCTCTTAGCTT+AGG | - | chr8_1:85669294-85669313 | None:intergenic | 30.0% | |
| TGATTCATCCTAATTGGAAT+AGG | + | chr8_1:85669338-85669357 | Msa1221770:intron | 30.0% | |
| !!! | TGATCGTTGTTTTGAATGAT+TGG | + | chr8_1:85669364-85669383 | Msa1221770:intron | 30.0% |
| !!! | GATCGTTGTTTTGAATGATT+GGG | + | chr8_1:85669365-85669384 | Msa1221770:intron | 30.0% |
| !!! | ATCGTTGTTTTGAATGATTG+GGG | + | chr8_1:85669366-85669385 | Msa1221770:intron | 30.0% |
| TCGGAAACAACTTAAAACTA+TGG | + | chr8_1:85669554-85669573 | Msa1221770:intron | 30.0% | |
| AAATCTAGTCAAAGGAGAAA+CGG | - | chr8_1:85669809-85669828 | None:intergenic | 30.0% | |
| TAACTATTCTCCTTTGACTA+TGG | + | chr8_1:85669834-85669853 | Msa1221770:intron | 30.0% | |
| !!! | TTTCTCTGAACCTTTTTTTC+AGG | + | chr8_1:85669918-85669937 | Msa1221770:intron | 30.0% |
| AGTTCTTCTTCCTGAAAAAA+AGG | - | chr8_1:85669931-85669950 | None:intergenic | 30.0% | |
| TTTCAGGAAGAAGAACTAAA+AGG | + | chr8_1:85669934-85669953 | Msa1221770:intron | 30.0% | |
| !! | TCTCATTTTTGCAAACAAAC+AGG | + | chr8_1:85669966-85669985 | Msa1221770:CDS | 30.0% |
| ACAAGATTAAAAATCGCCAA+TGG | + | chr8_1:85670252-85670271 | Msa1221770:CDS | 30.0% | |
| !! | AATGCTATTTCAAGGTAGTT+AGG | + | chr8_1:85670349-85670368 | Msa1221770:intron | 30.0% |
| !! | GAGTTGATGATTGATAACAT+TGG | - | chr8_1:85670457-85670476 | None:intergenic | 30.0% |
| TATCAATCATCAACTCAGTT+AGG | + | chr8_1:85670461-85670480 | Msa1221770:intron | 30.0% | |
| !!! | GTGGATACTAGTTTTGTTAA+TGG | - | chr8_1:85670689-85670708 | None:intergenic | 30.0% |
| !!! | TGGTCGCTGTTTTTTTTAAT+GGG | + | chr8_1:85670849-85670868 | Msa1221770:intron | 30.0% |
| TGAATTTCCAATCCAATTAG+TGG | + | chr8_1:85670898-85670917 | Msa1221770:intron | 30.0% | |
| AAATATGTTTGTAGTCCATG+TGG | + | chr8_1:85670960-85670979 | Msa1221770:intron | 30.0% | |
| TTTAAGGGCAGTTATTCTTA+TGG | + | chr8_1:85671211-85671230 | Msa1221770:intron | 30.0% | |
| ATTTCAAACGAGCATAAGTA+AGG | - | chr8_1:85671366-85671385 | None:intergenic | 30.0% | |
| TCAAAAAGTGACATCAACAT+TGG | - | chr8_1:85671485-85671504 | None:intergenic | 30.0% | |
| GATGCCAAATGTTAATATGT+AGG | + | chr8_1:85671585-85671604 | Msa1221770:intron | 30.0% | |
| TTTAGATCGATTGGTGAATT+CGG | + | chr8_1:85671670-85671689 | Msa1221770:three_prime_UTR | 30.0% | |
| !!! | ATGGTCGACATTTGTTTTTT+TGG | + | chr8_1:85671697-85671716 | Msa1221770:three_prime_UTR | 30.0% |
| TGAGAATCAGGATTTGGATT+TGG | - | chr8_1:85665683-85665702 | None:intergenic | 35.0% | |
| TAAGGTTAGGTTTCGGAATT+TGG | - | chr8_1:85665729-85665748 | None:intergenic | 35.0% | |
| GAAGGATTAAGGTTAGGTTT+CGG | - | chr8_1:85665736-85665755 | None:intergenic | 35.0% | |
| ! | TTCATCTGTTTTCGGTAACA+AGG | + | chr8_1:85665926-85665945 | Msa1221770:CDS | 35.0% |
| ! | ACATAGAATGGTGGTTTTTC+CGG | - | chr8_1:85665985-85666004 | None:intergenic | 35.0% |
| ! | AAGAAGCATACATAGAATGG+TGG | - | chr8_1:85665994-85666013 | None:intergenic | 35.0% |
| TTGATACTTGCATGTATGGA+TGG | + | chr8_1:85666259-85666278 | Msa1221770:intron | 35.0% | |
| GATTATTTGATACAGCGATC+GGG | + | chr8_1:85666301-85666320 | Msa1221770:intron | 35.0% | |
| ! | ATACTAGTTTGGTCTAGGTA+AGG | - | chr8_1:85666625-85666644 | None:intergenic | 35.0% |
| TTACCTAGACCAAACTAGTA+TGG | + | chr8_1:85666624-85666643 | Msa1221770:intron | 35.0% | |
| ! | AAACCATACTAGTTTGGTCT+AGG | - | chr8_1:85666630-85666649 | None:intergenic | 35.0% |
| GTAAAAACTCTACCTTCAGT+GGG | + | chr8_1:85666848-85666867 | Msa1221770:intron | 35.0% | |
| !! | AAAAAAGGCCTTAGTTTGTC+CGG | - | chr8_1:85667024-85667043 | None:intergenic | 35.0% |
| !!! | ACTAAGGCCTTTTTTCTTAG+AGG | + | chr8_1:85667029-85667048 | Msa1221770:intron | 35.0% |
| GATTTAGTGAGGAAAAACAG+TGG | - | chr8_1:85667217-85667236 | None:intergenic | 35.0% | |
| ATTGAGTACAGGATTTAGTG+AGG | - | chr8_1:85667228-85667247 | None:intergenic | 35.0% | |
| TTTGAATTAACCTGTGAACC+TGG | + | chr8_1:85667250-85667269 | Msa1221770:intron | 35.0% | |
| !!! | AAGTTTGCTGGTCTCATTTT+TGG | + | chr8_1:85667377-85667396 | Msa1221770:intron | 35.0% |
| !!! | AGTTTGCTGGTCTCATTTTT+GGG | + | chr8_1:85667378-85667397 | Msa1221770:intron | 35.0% |
| AACATGTAACAAAGCGAGTT+TGG | + | chr8_1:85667419-85667438 | Msa1221770:intron | 35.0% | |
| ! | TGGATAATTTTGTCCTCTTC+TGG | + | chr8_1:85667439-85667458 | Msa1221770:intron | 35.0% |
| CTAAGAAAATAGCTTGACAC+AGG | - | chr8_1:85667575-85667594 | None:intergenic | 35.0% | |
| ! | AGTGCTATTGTAATAAGTCC+TGG | + | chr8_1:85667697-85667716 | Msa1221770:intron | 35.0% |
| CAAGTATCAGGTAAACCTTA+TGG | + | chr8_1:85667769-85667788 | Msa1221770:intron | 35.0% | |
| GATGCAAGAATGAAACCATA+AGG | - | chr8_1:85667787-85667806 | None:intergenic | 35.0% | |
| !! | TTCTTGCATCTTTTGACTGA+TGG | + | chr8_1:85667797-85667816 | Msa1221770:intron | 35.0% |
| AAAAGGAATTGCATGATGAG+TGG | - | chr8_1:85667974-85667993 | None:intergenic | 35.0% | |
| CTAATTAACTGCAGAAGGAT+TGG | - | chr8_1:85668082-85668101 | None:intergenic | 35.0% | |
| TCACACTAATTAACTGCAGA+AGG | - | chr8_1:85668087-85668106 | None:intergenic | 35.0% | |
| TAGGAAATTTGGCCATAAAG+AGG | - | chr8_1:85668369-85668388 | None:intergenic | 35.0% | |
| TTGCCTATAAACAAAAGGAG+GGG | - | chr8_1:85668428-85668447 | None:intergenic | 35.0% | |
| GTTGCCTATAAACAAAAGGA+GGG | - | chr8_1:85668429-85668448 | None:intergenic | 35.0% | |
| TGTTGCCTATAAACAAAAGG+AGG | - | chr8_1:85668430-85668449 | None:intergenic | 35.0% | |
| ! | CTTATTTCTTCTGACCATCT+CGG | + | chr8_1:85668453-85668472 | Msa1221770:intron | 35.0% |
| TTGTGGAAAGAAATGCTTTG+TGG | + | chr8_1:85668568-85668587 | Msa1221770:intron | 35.0% | |
| ! | TGCCATTTCACTTGTAAATG+TGG | + | chr8_1:85668657-85668676 | Msa1221770:intron | 35.0% |
| GCCATTTCACTTGTAAATGT+GGG | + | chr8_1:85668658-85668677 | Msa1221770:intron | 35.0% | |
| TCCCACATTTACAAGTGAAA+TGG | - | chr8_1:85668662-85668681 | None:intergenic | 35.0% | |
| ! | TGAATTCTTTTCCCATCTTG+TGG | - | chr8_1:85668755-85668774 | None:intergenic | 35.0% |
| ! | TTTTTGTCCATAGGCCATAT+TGG | + | chr8_1:85668828-85668847 | Msa1221770:intron | 35.0% |
| TTGATTCAAGTGACACTGAT+AGG | + | chr8_1:85668891-85668910 | Msa1221770:CDS | 35.0% | |
| TGCATAATATATGCAAGGTC+TGG | + | chr8_1:85669163-85669182 | Msa1221770:intron | 35.0% | |
| GCATAATATATGCAAGGTCT+GGG | + | chr8_1:85669164-85669183 | Msa1221770:intron | 35.0% | |
| CATAATATATGCAAGGTCTG+GGG | + | chr8_1:85669165-85669184 | Msa1221770:intron | 35.0% | |
| !! | CTTCACGTAATCTATTTTGG+TGG | - | chr8_1:85669206-85669225 | None:intergenic | 35.0% |
| GGTGTTTGATTCATCCTAAT+TGG | + | chr8_1:85669332-85669351 | Msa1221770:intron | 35.0% | |
| GATCAAAGCCTATTCCAATT+AGG | - | chr8_1:85669349-85669368 | None:intergenic | 35.0% | |
| !!! | TCGTTGTTTTGAATGATTGG+GGG | + | chr8_1:85669367-85669386 | Msa1221770:intron | 35.0% |
| ! | TAAGTTGTTTCCGACTATCA+AGG | - | chr8_1:85669548-85669567 | None:intergenic | 35.0% |
| GACAACAAAACCATAGTCAA+AGG | - | chr8_1:85669847-85669866 | None:intergenic | 35.0% | |
| ! | TGGATGCACATATTTTCACT+AGG | + | chr8_1:85670011-85670030 | Msa1221770:intron | 35.0% |
| ! | GGATGCACATATTTTCACTA+GGG | + | chr8_1:85670012-85670031 | Msa1221770:intron | 35.0% |
| ! | GATGCACATATTTTCACTAG+GGG | + | chr8_1:85670013-85670032 | Msa1221770:intron | 35.0% |
| ! | ATGCACATATTTTCACTAGG+GGG | + | chr8_1:85670014-85670033 | Msa1221770:intron | 35.0% |
| GTGCATGTGCATAGATAATA+TGG | + | chr8_1:85670103-85670122 | Msa1221770:intron | 35.0% | |
| TGCAGCATCACTACTTATTT+AGG | - | chr8_1:85670386-85670405 | None:intergenic | 35.0% | |
| CAGAGGGAAAAAAAATGACT+TGG | + | chr8_1:85670805-85670824 | Msa1221770:intron | 35.0% | |
| !!! | GTGGTCGCTGTTTTTTTTAA+TGG | + | chr8_1:85670848-85670867 | Msa1221770:intron | 35.0% |
| ! | TTACAAGTTGGAATTCCACA+TGG | - | chr8_1:85670978-85670997 | None:intergenic | 35.0% |
| AGGGACTAAACTTTACAAGT+TGG | - | chr8_1:85670990-85671009 | None:intergenic | 35.0% | |
| TGCACAGTCATACTTATGTA+AGG | - | chr8_1:85671240-85671259 | None:intergenic | 35.0% | |
| ! | TATGCTCGTTTGAAATGTGA+AGG | + | chr8_1:85671370-85671389 | Msa1221770:intron | 35.0% |
| ! | ATGCTCGTTTGAAATGTGAA+GGG | + | chr8_1:85671371-85671390 | Msa1221770:intron | 35.0% |
| TACACAACGTAAAAGTCCAT+AGG | - | chr8_1:85671423-85671442 | None:intergenic | 35.0% | |
| ! | ACTTCCTTTTTGTTGCTCAT+TGG | + | chr8_1:85671554-85671573 | Msa1221770:intron | 35.0% |
| ! | CTTCCTTTTTGTTGCTCATT+GGG | + | chr8_1:85671555-85671574 | Msa1221770:intron | 35.0% |
| ! | TTCCTTTTTGTTGCTCATTG+GGG | + | chr8_1:85671556-85671575 | Msa1221770:intron | 35.0% |
| TTGAGCAATACACTCAAATC+TGG | + | chr8_1:85671608-85671627 | Msa1221770:CDS | 35.0% | |
| TTTGTGTAATCGAGCTACAT+GGG | + | chr8_1:85671887-85671906 | Msa1221770:three_prime_UTR | 35.0% | |
| ATCCTAACCTTATTGCTACA+TGG | + | chr8_1:85671935-85671954 | Msa1221770:three_prime_UTR | 35.0% | |
| TCCTAACCTTATTGCTACAT+GGG | + | chr8_1:85671936-85671955 | Msa1221770:three_prime_UTR | 35.0% | |
| CGATGATGAGAATCAGGATT+TGG | - | chr8_1:85665689-85665708 | None:intergenic | 40.0% | |
| ACGAAACGATGATGAGAATC+AGG | - | chr8_1:85665695-85665714 | None:intergenic | 40.0% | |
| AGGTTTCGGAATTTGGAAGA+GGG | - | chr8_1:85665722-85665741 | None:intergenic | 40.0% | |
| TAGGTTTCGGAATTTGGAAG+AGG | - | chr8_1:85665723-85665742 | None:intergenic | 40.0% | |
| GCGATTGAAGGATTAAGGTT+AGG | - | chr8_1:85665742-85665761 | None:intergenic | 40.0% | |
| GTGATGCGATTGAAGGATTA+AGG | - | chr8_1:85665747-85665766 | None:intergenic | 40.0% | |
| TGAATCAGGTGCAAACGATT+CGG | - | chr8_1:85665839-85665858 | None:intergenic | 40.0% | |
| ACTAATCCCATCTTCCGATT+CGG | - | chr8_1:85665891-85665910 | None:intergenic | 40.0% | |
| !! | TTTTTCAGATCGGCTTCAGA+TGG | + | chr8_1:85666079-85666098 | Msa1221770:intron | 40.0% |
| !! | TTTTCAGATCGGCTTCAGAT+GGG | + | chr8_1:85666080-85666099 | Msa1221770:intron | 40.0% |
| AATGAGATCGAGTACGAACT+TGG | - | chr8_1:85666125-85666144 | None:intergenic | 40.0% | |
| TACTTGCATGTATGGATGGA+TGG | + | chr8_1:85666263-85666282 | Msa1221770:intron | 40.0% | |
| CACTAAACATGCAACGACAT+AGG | - | chr8_1:85666828-85666847 | None:intergenic | 40.0% | |
| CTATGTCGTTGCATGTTTAG+TGG | + | chr8_1:85666826-85666845 | Msa1221770:intron | 40.0% | |
| GGTAAAAACTCTACCTTCAG+TGG | + | chr8_1:85666847-85666866 | Msa1221770:intron | 40.0% | |
| CTACAAAAATTGCCCACTGA+AGG | - | chr8_1:85666863-85666882 | None:intergenic | 40.0% | |
| ! | CTTCAGTGGGCAATTTTTGT+AGG | + | chr8_1:85666861-85666880 | Msa1221770:intron | 40.0% |
| ACTAAAACGCTGGACACAAT+AGG | - | chr8_1:85666889-85666908 | None:intergenic | 40.0% | |
| TGGAAATTGGACTAAAACGC+TGG | - | chr8_1:85666899-85666918 | None:intergenic | 40.0% | |
| CTCTACAAAGGGATGGAAAT+TGG | - | chr8_1:85666912-85666931 | None:intergenic | 40.0% | |
| TTTCCATCCCTTTGTAGAGT+AGG | + | chr8_1:85666913-85666932 | Msa1221770:intron | 40.0% | |
| CAAGTGACCTACTCTACAAA+GGG | - | chr8_1:85666923-85666942 | None:intergenic | 40.0% | |
| ! | AGTTTTTCCCGGACAAACTA+AGG | + | chr8_1:85667013-85667032 | Msa1221770:intron | 40.0% |
| !! | AAAAAGGCCTTAGTTTGTCC+GGG | - | chr8_1:85667023-85667042 | None:intergenic | 40.0% |
| !!! | AGGCCTTTTTTCTTAGAGGT+AGG | + | chr8_1:85667033-85667052 | Msa1221770:intron | 40.0% |
| TGTTGTATAGGATTTGAGCC+TGG | - | chr8_1:85667193-85667212 | None:intergenic | 40.0% | |
| ATTGACACAGTCCTATGAGT+AGG | - | chr8_1:85667292-85667311 | None:intergenic | 40.0% | |
| ! | TAATTTTGTCCTCTTCTGGC+TGG | + | chr8_1:85667443-85667462 | Msa1221770:intron | 40.0% |
| AAAAAATCACCAGCCAGAAG+AGG | - | chr8_1:85667455-85667474 | None:intergenic | 40.0% | |
| ACACACATCAAGGACTTAGT+AGG | - | chr8_1:85668041-85668060 | None:intergenic | 40.0% | |
| TGCAGCATCTTTCTGTTGTT+GGG | - | chr8_1:85668328-85668347 | None:intergenic | 40.0% | |
| AAAGATGCTGCAGAACTTAG+AGG | + | chr8_1:85668336-85668355 | Msa1221770:intron | 40.0% | |
| AAGATGCTGCAGAACTTAGA+GGG | + | chr8_1:85668337-85668356 | Msa1221770:intron | 40.0% | |
| !! | CAACCCCTCCTTTTGTTTAT+AGG | + | chr8_1:85668422-85668441 | Msa1221770:intron | 40.0% |
| CGAGATGGTCAGAAGAAATA+AGG | - | chr8_1:85668455-85668474 | None:intergenic | 40.0% | |
| TAAGTGAGAGTGAGAGACTT+AGG | - | chr8_1:85668491-85668510 | None:intergenic | 40.0% | |
| TCACAGGAAAATCGAAAACC+AGG | + | chr8_1:85668720-85668739 | Msa1221770:intron | 40.0% | |
| ! | TCTTTTCCCATCTTGTGGTT+TGG | - | chr8_1:85668750-85668769 | None:intergenic | 40.0% |
| GGAAAGTAACACCTCCAATA+TGG | - | chr8_1:85668845-85668864 | None:intergenic | 40.0% | |
| TGATAGGCTTGTGATAGCTA+GGG | + | chr8_1:85668907-85668926 | Msa1221770:CDS | 40.0% | |
| CATATACCTCCAGAATTGCA+TGG | - | chr8_1:85668940-85668959 | None:intergenic | 40.0% | |
| TGCAATTTACAAGGGATTGG+CGG | + | chr8_1:85669065-85669084 | Msa1221770:intron | 40.0% | |
| !!! | AATCTATTTTGGTGGTGGCT+GGG | - | chr8_1:85669198-85669217 | None:intergenic | 40.0% |
| !!! | TAATCTATTTTGGTGGTGGC+TGG | - | chr8_1:85669199-85669218 | None:intergenic | 40.0% |
| !!! | CACGTAATCTATTTTGGTGG+TGG | - | chr8_1:85669203-85669222 | None:intergenic | 40.0% |
| ! | TTCATGCACTCCTTGATAGT+CGG | + | chr8_1:85669535-85669554 | Msa1221770:intron | 40.0% |
| ACTAGGGGGATAAGAAGTAA+GGG | + | chr8_1:85670028-85670047 | Msa1221770:intron | 40.0% | |
| GCTATGAAGCTGATATGATC+AGG | + | chr8_1:85670065-85670084 | Msa1221770:intron | 40.0% | |
| ! | TAGATCCTGCATAATGGAAC+GGG | - | chr8_1:85670186-85670205 | None:intergenic | 40.0% |
| ! | GTAGATCCTGCATAATGGAA+CGG | - | chr8_1:85670187-85670206 | None:intergenic | 40.0% |
| ACTTCTGCTATAAAAGGCGA+AGG | + | chr8_1:85670287-85670306 | Msa1221770:CDS | 40.0% | |
| ! | AAAAGGCGAAGGACTTTTTG+AGG | + | chr8_1:85670298-85670317 | Msa1221770:CDS | 40.0% |
| ! | AAAGGCGAAGGACTTTTTGA+GGG | + | chr8_1:85670299-85670318 | Msa1221770:CDS | 40.0% |
| TCATCAACTCAGTTAGGACT+TGG | + | chr8_1:85670467-85670486 | Msa1221770:intron | 40.0% | |
| CATCAACTCAGTTAGGACTT+GGG | + | chr8_1:85670468-85670487 | Msa1221770:intron | 40.0% | |
| TGGCCAGATCAATGTTGAAT+TGG | + | chr8_1:85670825-85670844 | Msa1221770:intron | 40.0% | |
| GGCCAGATCAATGTTGAATT+GGG | + | chr8_1:85670826-85670845 | Msa1221770:intron | 40.0% | |
| CACCCAATTCAACATTGATC+TGG | - | chr8_1:85670831-85670850 | None:intergenic | 40.0% | |
| CAGATCAATGTTGAATTGGG+TGG | + | chr8_1:85670829-85670848 | Msa1221770:intron | 40.0% | |
| ! | ATGTGAAGGGAGGTATATCT+TGG | + | chr8_1:85671384-85671403 | Msa1221770:intron | 40.0% |
| TGGTCTAGGAAATATGCCTA+TGG | + | chr8_1:85671404-85671423 | Msa1221770:intron | 40.0% | |
| ! | AGCAACAAAAAGGAAGTGCA+AGG | - | chr8_1:85671551-85671570 | None:intergenic | 40.0% |
| AACCCCAATGAGCAACAAAA+AGG | - | chr8_1:85671561-85671580 | None:intergenic | 40.0% | |
| AGCAATACACTCAAATCTGG+AGG | + | chr8_1:85671611-85671630 | Msa1221770:CDS | 40.0% | |
| AATACACTCAAATCTGGAGG+TGG | + | chr8_1:85671614-85671633 | Msa1221770:CDS | 40.0% | |
| TCGAAACTACTCTATGCAGA+GGG | - | chr8_1:85671843-85671862 | None:intergenic | 40.0% | |
| TTCGAAACTACTCTATGCAG+AGG | - | chr8_1:85671844-85671863 | None:intergenic | 40.0% | |
| GTTTGTGTAATCGAGCTACA+TGG | + | chr8_1:85671886-85671905 | Msa1221770:three_prime_UTR | 40.0% | |
| TTGTGTAATCGAGCTACATG+GGG | + | chr8_1:85671888-85671907 | Msa1221770:three_prime_UTR | 40.0% | |
| GGTTTCGGAATTTGGAAGAG+GGG | - | chr8_1:85665721-85665740 | None:intergenic | 45.0% | |
| GAAGCTCGAATTCTCGTTCT+CGG | + | chr8_1:85665948-85665967 | Msa1221770:CDS | 45.0% | |
| GATCGAGTACGAACTTGGAA+TGG | - | chr8_1:85666120-85666139 | None:intergenic | 45.0% | |
| TGTATGGATGGATGGCTGAT+TGG | + | chr8_1:85666271-85666290 | Msa1221770:intron | 45.0% | |
| TGACCTACTCTACAAAGGGA+TGG | - | chr8_1:85666919-85666938 | None:intergenic | 45.0% | |
| GCAAGTGACCTACTCTACAA+AGG | - | chr8_1:85666924-85666943 | None:intergenic | 45.0% | |
| AATTTGAACCAGCGTAGCTC+AGG | + | chr8_1:85667061-85667080 | Msa1221770:intron | 45.0% | |
| GAGCAAGTTATCTGAGCTTG+AGG | - | chr8_1:85667144-85667163 | None:intergenic | 45.0% | |
| TTGCTTGAGCTTAATGAGCC+AGG | + | chr8_1:85667172-85667191 | Msa1221770:intron | 45.0% | |
| CTTACCTCCATCCTACTCAT+AGG | + | chr8_1:85667278-85667297 | Msa1221770:intron | 45.0% | |
| ACACAGTCCTATGAGTAGGA+TGG | - | chr8_1:85667288-85667307 | None:intergenic | 45.0% | |
| AACGAATAGCTGGTGACTTC+TGG | + | chr8_1:85667870-85667889 | Msa1221770:intron | 45.0% | |
| GTGTGTGTGTGTGAATGTGT+AGG | + | chr8_1:85668121-85668140 | Msa1221770:intron | 45.0% | |
| CAGCATCTTTCTGTTGTTGG+GGG | - | chr8_1:85668326-85668345 | None:intergenic | 45.0% | |
| GCAGCATCTTTCTGTTGTTG+GGG | - | chr8_1:85668327-85668346 | None:intergenic | 45.0% | |
| CTGCAGCATCTTTCTGTTGT+TGG | - | chr8_1:85668329-85668348 | None:intergenic | 45.0% | |
| ! | GAGAGACTTAGGTTAGTTGC+TGG | - | chr8_1:85668480-85668499 | None:intergenic | 45.0% |
| AACTGCGGTAGCTCATATTG+TGG | + | chr8_1:85668551-85668570 | Msa1221770:intron | 45.0% | |
| GCATGTCAGAACTACTGCTT+GGG | - | chr8_1:85668640-85668659 | None:intergenic | 45.0% | |
| CAGGAAAATCGAAAACCAGG+TGG | + | chr8_1:85668723-85668742 | Msa1221770:intron | 45.0% | |
| TTGTCCATAGGCCATATTGG+AGG | + | chr8_1:85668831-85668850 | Msa1221770:intron | 45.0% | |
| AACACCTCCAATATGGCCTA+TGG | - | chr8_1:85668838-85668857 | None:intergenic | 45.0% | |
| CTGATAGGCTTGTGATAGCT+AGG | + | chr8_1:85668906-85668925 | Msa1221770:CDS | 45.0% | |
| GTGGGTGTATGTGTTGTATC+AGG | - | chr8_1:85668965-85668984 | None:intergenic | 45.0% | |
| AAGTGTGTGTGTGTGTGTGT+GGG | - | chr8_1:85668983-85669002 | None:intergenic | 45.0% | |
| ! | TGAGCTTAGCTCAGTTGGTA+TGG | + | chr8_1:85669136-85669155 | Msa1221770:intron | 45.0% |
| !!! | ATCTATTTTGGTGGTGGCTG+GGG | - | chr8_1:85669197-85669216 | None:intergenic | 45.0% |
| CACTAGGGGGATAAGAAGTA+AGG | + | chr8_1:85670027-85670046 | Msa1221770:intron | 45.0% | |
| TCCATTATGCAGGATCTACC+AGG | + | chr8_1:85670188-85670207 | Msa1221770:intron | 45.0% | |
| !! | GACTTTTTGAGGGACTTGAC+TGG | + | chr8_1:85670309-85670328 | Msa1221770:CDS | 45.0% |
| GTAGCAGCCACTAATTGGAT+TGG | - | chr8_1:85670908-85670927 | None:intergenic | 45.0% | |
| GACTAGTAGCAGCCACTAAT+TGG | - | chr8_1:85670913-85670932 | None:intergenic | 45.0% | |
| ! | CTCGTTTGAAATGTGAAGGG+AGG | + | chr8_1:85671374-85671393 | Msa1221770:intron | 45.0% |
| ! | AGGGAGGTATATCTTGGTCT+AGG | + | chr8_1:85671390-85671409 | Msa1221770:intron | 45.0% |
| GATCGATTGGTGAATTCGGA+AGG | + | chr8_1:85671674-85671693 | Msa1221770:three_prime_UTR | 45.0% | |
| GATTGGTGAATTCGGAAGGA+TGG | + | chr8_1:85671678-85671697 | Msa1221770:three_prime_UTR | 45.0% | |
| CGAAACTACTCTATGCAGAG+GGG | - | chr8_1:85671842-85671861 | None:intergenic | 45.0% | |
| CCCCATGTAGCAATAAGGTT+AGG | - | chr8_1:85671940-85671959 | None:intergenic | 45.0% | |
| AGGGCATGTGATGCGATTGA+AGG | - | chr8_1:85665754-85665773 | None:intergenic | 50.0% | |
| AGCAGAAGCGAAGAGAGGAA+GGG | - | chr8_1:85665773-85665792 | None:intergenic | 50.0% | |
| AAGCAGAAGCGAAGAGAGGA+AGG | - | chr8_1:85665774-85665793 | None:intergenic | 50.0% | |
| CTCAAAGCAGAAGCGAAGAG+AGG | - | chr8_1:85665778-85665797 | None:intergenic | 50.0% | |
| TAATCCCTCTGCTGCCGAAT+CGG | + | chr8_1:85665874-85665893 | Msa1221770:five_prime_UTR | 50.0% | |
| GTTCTCGGTCTTGACAATGC+CGG | + | chr8_1:85665963-85665982 | Msa1221770:CDS | 50.0% | |
| GTAAGTCAAGCCAGGTTCAC+AGG | - | chr8_1:85667263-85667282 | None:intergenic | 50.0% | |
| CAGTCCTATGAGTAGGATGG+AGG | - | chr8_1:85667285-85667304 | None:intergenic | 50.0% | |
| CAGGTGGGCAAACAAGTATC+AGG | + | chr8_1:85667757-85667776 | Msa1221770:intron | 50.0% | |
| AGAGGGTCTGCACCTCTTTA+TGG | + | chr8_1:85668354-85668373 | Msa1221770:intron | 50.0% | |
| GGCATGTCAGAACTACTGCT+TGG | - | chr8_1:85668641-85668660 | None:intergenic | 50.0% | |
| !! | ATCTTGTGGTTTGGTCCACC+TGG | - | chr8_1:85668741-85668760 | None:intergenic | 50.0% |
| AGGTGGACCAAACCACAAGA+TGG | + | chr8_1:85668740-85668759 | Msa1221770:intron | 50.0% | |
| GGTGGACCAAACCACAAGAT+GGG | + | chr8_1:85668741-85668760 | Msa1221770:intron | 50.0% | |
| TAGGCTTGTGATAGCTAGGG+AGG | + | chr8_1:85668910-85668929 | Msa1221770:CDS | 50.0% | |
| GGAGGAGTTCCATGCAATTC+TGG | + | chr8_1:85668928-85668947 | Msa1221770:CDS | 50.0% | |
| GGAGTTCCATGCAATTCTGG+AGG | + | chr8_1:85668931-85668950 | Msa1221770:CDS | 50.0% | |
| GAAGTGTGTGTGTGTGTGTG+TGG | - | chr8_1:85668984-85669003 | None:intergenic | 50.0% | |
| TAGGCGTCTCCTAAGCTAAG+AGG | + | chr8_1:85669282-85669301 | Msa1221770:intron | 50.0% | |
| TGTGTCCCGTTCCATTATGC+AGG | + | chr8_1:85670178-85670197 | Msa1221770:intron | 50.0% | |
| GCCTGGTAGATCCTGCATAA+TGG | - | chr8_1:85670192-85670211 | None:intergenic | 50.0% | |
| CGTCACTGCAGCATCATCAA+GGG | - | chr8_1:85670216-85670235 | None:intergenic | 50.0% | |
| !! | CCTTGATGATGCTGCAGTGA+CGG | + | chr8_1:85670214-85670233 | Msa1221770:CDS | 50.0% |
| GTATGACTGTGCAGCGATCT+TGG | + | chr8_1:85671247-85671266 | Msa1221770:intron | 50.0% | |
| TCAAATCTGGAGGTGGCTGA+AGG | + | chr8_1:85671621-85671640 | Msa1221770:CDS | 50.0% | |
| !! | TCTTCCGATTCGGCAGCAGA+GGG | - | chr8_1:85665881-85665900 | None:intergenic | 55.0% |
| !! | ATCTTCCGATTCGGCAGCAG+AGG | - | chr8_1:85665882-85665901 | None:intergenic | 55.0% |
| TCTGCTGCCGAATCGGAAGA+TGG | + | chr8_1:85665881-85665900 | Msa1221770:exon | 55.0% | |
| CTGCTGCCGAATCGGAAGAT+GGG | + | chr8_1:85665882-85665901 | Msa1221770:exon | 55.0% | |
| GAACCAGCGTAGCTCAGGTT+TGG | + | chr8_1:85667066-85667085 | Msa1221770:intron | 55.0% | |
| AAGCCAAACCTGAGCTACGC+TGG | - | chr8_1:85667072-85667091 | None:intergenic | 55.0% | |
| GGATGGAGGTAAGTCAAGCC+AGG | - | chr8_1:85667271-85667290 | None:intergenic | 55.0% | |
| ! | GGTTAGTTGCTGGACCGAGA+TGG | - | chr8_1:85668470-85668489 | None:intergenic | 55.0% |
| CCAACTGAGCTAAGCTCACG+AGG | - | chr8_1:85669134-85669153 | None:intergenic | 55.0% | |
| CCTCGTGAGCTTAGCTCAGT+TGG | + | chr8_1:85669131-85669150 | Msa1221770:intron | 55.0% | |
| GGGGGATAAGAAGTAAGGGC+TGG | + | chr8_1:85670032-85670051 | Msa1221770:intron | 55.0% | |
| CCGTCACTGCAGCATCATCA+AGG | - | chr8_1:85670217-85670236 | None:intergenic | 55.0% | |
| TGACTGTGCAGCGATCTTGG+TGG | + | chr8_1:85671250-85671269 | Msa1221770:intron | 55.0% | |
| !! | GCAGCATCATCAAGGGCGCC+TGG | - | chr8_1:85670209-85670228 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 85665652 | 85671959 | 85665652 | ID=Msa1221770;Name=Msa1221770 |
| chr8_1 | mRNA | 85665652 | 85671959 | 85665652 | ID=Msa1221770-mRNA-1;Parent=Msa1221770;Name=Msa1221770-mRNA-1;_AED=0.21;_eAED=0.21;_QI=248|1|1|1|0.85|0.87|8|319|182 |
| chr8_1 | exon | 85665652 | 85666002 | 85665652 | ID=Msa1221770-mRNA-1:exon:30814;Parent=Msa1221770-mRNA-1 |
| chr8_1 | exon | 85666087 | 85666125 | 85666087 | ID=Msa1221770-mRNA-1:exon:30815;Parent=Msa1221770-mRNA-1 |
| chr8_1 | exon | 85666316 | 85666378 | 85666316 | ID=Msa1221770-mRNA-1:exon:30816;Parent=Msa1221770-mRNA-1 |
| chr8_1 | exon | 85667760 | 85667778 | 85667760 | ID=Msa1221770-mRNA-1:exon:30817;Parent=Msa1221770-mRNA-1 |
| chr8_1 | exon | 85668841 | 85668952 | 85668841 | ID=Msa1221770-mRNA-1:exon:30818;Parent=Msa1221770-mRNA-1 |
| chr8_1 | exon | 85669940 | 85669987 | 85669940 | ID=Msa1221770-mRNA-1:exon:30819;Parent=Msa1221770-mRNA-1 |
| chr8_1 | exon | 85670200 | 85670330 | 85670200 | ID=Msa1221770-mRNA-1:exon:30820;Parent=Msa1221770-mRNA-1 |
| chr8_1 | exon | 85671607 | 85671959 | 85671607 | ID=Msa1221770-mRNA-1:exon:30821;Parent=Msa1221770-mRNA-1 |
| chr8_1 | five_prime_UTR | 85665652 | 85665899 | 85665652 | ID=Msa1221770-mRNA-1:five_prime_utr;Parent=Msa1221770-mRNA-1 |
| chr8_1 | CDS | 85665900 | 85666002 | 85665900 | ID=Msa1221770-mRNA-1:cds;Parent=Msa1221770-mRNA-1 |
| chr8_1 | CDS | 85666087 | 85666125 | 85666087 | ID=Msa1221770-mRNA-1:cds;Parent=Msa1221770-mRNA-1 |
| chr8_1 | CDS | 85666316 | 85666378 | 85666316 | ID=Msa1221770-mRNA-1:cds;Parent=Msa1221770-mRNA-1 |
| chr8_1 | CDS | 85667760 | 85667778 | 85667760 | ID=Msa1221770-mRNA-1:cds;Parent=Msa1221770-mRNA-1 |
| chr8_1 | CDS | 85668841 | 85668952 | 85668841 | ID=Msa1221770-mRNA-1:cds;Parent=Msa1221770-mRNA-1 |
| chr8_1 | CDS | 85669940 | 85669987 | 85669940 | ID=Msa1221770-mRNA-1:cds;Parent=Msa1221770-mRNA-1 |
| chr8_1 | CDS | 85670200 | 85670330 | 85670200 | ID=Msa1221770-mRNA-1:cds;Parent=Msa1221770-mRNA-1 |
| chr8_1 | CDS | 85671607 | 85671640 | 85671607 | ID=Msa1221770-mRNA-1:cds;Parent=Msa1221770-mRNA-1 |
| chr8_1 | three_prime_UTR | 85671641 | 85671959 | 85671641 | ID=Msa1221770-mRNA-1:three_prime_utr;Parent=Msa1221770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
