Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1314110 | sp|Q5M729|ODP23_ARATH | 68.132 | 546 | 160 | 9 | 2 | 543 | 4 | 539 | 0.0 | 740 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1314110 | G7LJ01 | 96.869 | 543 | 17 | 0 | 1 | 543 | 1 | 543 | 0.0 | 1089 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0759470 | Msa1314110 | 0.802555 | 5.307222e-49 | -8.615850e-47 |
| Msa1314110 | Msa1398870 | 0.821551 | 3.801418e-53 | -8.615850e-47 |
| Msa0996830 | Msa1314110 | 0.835058 | 2.093091e-56 | -8.615850e-47 |
| Msa1069840 | Msa1314110 | 0.870311 | 1.605838e-66 | -8.615850e-47 |
| Msa1147690 | Msa1314110 | 0.829169 | 5.984322e-55 | -8.615850e-47 |
| Msa1222520 | Msa1314110 | 0.800741 | 1.249924e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1314110 | MtrunA17_Chr8g0343061 | 96.869 | 543 | 17 | 0 | 1 | 543 | 1 | 543 | 0.0 | 1089 |
| Msa1314110 | MtrunA17_Chr1g0197901 | 41.575 | 457 | 219 | 8 | 109 | 543 | 195 | 625 | 8.78e-105 | 327 |
| Msa1314110 | MtrunA17_Chr1g0197901 | 64.130 | 92 | 32 | 1 | 105 | 196 | 66 | 156 | 3.75e-31 | 127 |
| Msa1314110 | MtrunA17_Chr1g0210021 | 32.127 | 442 | 267 | 10 | 115 | 543 | 49 | 470 | 3.82e-56 | 195 |
| Msa1314110 | MtrunA17_Chr1g0200441 | 35.814 | 430 | 262 | 7 | 115 | 541 | 37 | 455 | 4.67e-53 | 186 |
| Msa1314110 | MtrunA17_Chr2g0277631 | 28.348 | 448 | 246 | 10 | 102 | 543 | 73 | 451 | 1.70e-39 | 149 |
| Msa1314110 | MtrunA17_Chr4g0067561 | 25.684 | 475 | 284 | 18 | 110 | 543 | 71 | 517 | 2.17e-35 | 139 |
| Msa1314110 | MtrunA17_Chr5g0444531 | 34.783 | 230 | 143 | 3 | 316 | 543 | 229 | 453 | 9.35e-30 | 122 |
| Msa1314110 | MtrunA17_Chr5g0444531 | 26.446 | 242 | 145 | 9 | 102 | 316 | 76 | 311 | 4.41e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1314110 | AT3G13930.1 | 68.921 | 547 | 158 | 8 | 1 | 543 | 1 | 539 | 0.0 | 740 |
| Msa1314110 | AT1G54220.1 | 68.132 | 546 | 160 | 9 | 2 | 543 | 4 | 539 | 0.0 | 740 |
| Msa1314110 | AT1G54220.2 | 68.132 | 546 | 160 | 9 | 2 | 543 | 4 | 539 | 0.0 | 740 |
| Msa1314110 | AT3G52200.1 | 42.140 | 458 | 217 | 9 | 108 | 543 | 206 | 637 | 8.26e-100 | 315 |
| Msa1314110 | AT3G52200.1 | 67.500 | 80 | 26 | 0 | 117 | 196 | 88 | 167 | 3.23e-27 | 116 |
| Msa1314110 | AT3G52200.2 | 42.140 | 458 | 217 | 9 | 108 | 543 | 282 | 713 | 4.54e-99 | 315 |
| Msa1314110 | AT3G52200.2 | 55.652 | 115 | 48 | 2 | 83 | 196 | 131 | 243 | 8.50e-28 | 118 |
| Msa1314110 | AT1G34430.1 | 34.253 | 435 | 267 | 7 | 115 | 541 | 40 | 463 | 5.50e-52 | 184 |
| Msa1314110 | AT3G25860.1 | 34.945 | 455 | 263 | 12 | 102 | 543 | 46 | 480 | 1.53e-47 | 172 |
| Msa1314110 | AT4G26910.2 | 28.661 | 478 | 266 | 11 | 79 | 543 | 46 | 461 | 1.40e-39 | 150 |
| Msa1314110 | AT4G26910.1 | 28.033 | 478 | 270 | 10 | 79 | 543 | 46 | 462 | 3.00e-39 | 149 |
| Msa1314110 | AT3G06850.1 | 27.483 | 433 | 260 | 12 | 126 | 543 | 87 | 480 | 6.25e-39 | 149 |
| Msa1314110 | AT3G06850.2 | 27.483 | 433 | 260 | 12 | 126 | 543 | 87 | 480 | 6.25e-39 | 149 |
| Msa1314110 | AT4G26910.3 | 28.979 | 421 | 236 | 8 | 125 | 543 | 4 | 363 | 1.03e-38 | 145 |
| Msa1314110 | AT5G55070.1 | 37.391 | 230 | 137 | 3 | 316 | 543 | 238 | 462 | 4.58e-33 | 132 |
| Msa1314110 | AT5G55070.2 | 37.391 | 230 | 137 | 3 | 316 | 543 | 238 | 462 | 4.58e-33 | 132 |
Find 191 sgRNAs with CRISPR-Local
Find 552 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTACAACAACATGGTTTC+TGG | 0.107835 | 8_4:-12659736 | None:intergenic |
| CCCTTCCTTGCGTACTATTT+TGG | 0.120206 | 8_4:-12655397 | None:intergenic |
| TCCTCTGCCACCTCTTTCTT+TGG | 0.129783 | 8_4:-12655729 | None:intergenic |
| AAGCCATTGTTGATTGAAAT+TGG | 0.190372 | 8_4:-12652383 | None:intergenic |
| CCTCTGCCACCTCTTTCTTT+GGG | 0.196063 | 8_4:-12655728 | None:intergenic |
| TCAACTCAATTTATAATCTA+AGG | 0.245144 | 8_4:+12660153 | Msa1314110:three_prime_UTR |
| GGCGATGAGAATGGAAAATT+AGG | 0.248167 | 8_4:-12652354 | None:intergenic |
| CAAGGTCATTTACTGATATA+CGG | 0.255596 | 8_4:-12657450 | None:intergenic |
| TATGTTCTGGTTTGGTTCGC+TGG | 0.258603 | 8_4:+12652264 | Msa1314110:five_prime_UTR |
| TCTTCTAAGAACATGATTTC+AGG | 0.258675 | 8_4:-12659976 | None:intergenic |
| GACTATTTGTTCCAGTCGTC+AGG | 0.270208 | 8_4:+12658622 | Msa1314110:CDS |
| ATCCTCGTTTGCCGGTATAA+AGG | 0.273609 | 8_4:-12660007 | None:intergenic |
| CACCTGGTATTTACCCATTT+GGG | 0.277986 | 8_4:+12659835 | Msa1314110:three_prime_UTR |
| TCACCTGGTATTTACCCATT+TGG | 0.278179 | 8_4:+12659834 | Msa1314110:three_prime_UTR |
| AGGTGGGGCAGGTGTTTCTT+TGG | 0.283825 | 8_4:-12655703 | None:intergenic |
| TTCAATAACCTCGTAATCTT+GGG | 0.293547 | 8_4:-12658813 | None:intergenic |
| CTTCAATAACCTCGTAATCT+TGG | 0.301677 | 8_4:-12658814 | None:intergenic |
| CTTCCCGCACACCAGGAAAT+TGG | 0.302302 | 8_4:+12655050 | Msa1314110:CDS |
| TGCTGCATCTGTTGCAGGCT+TGG | 0.304681 | 8_4:-12656899 | None:intergenic |
| TTTATTACAGGCTGCTGCTT+TGG | 0.317388 | 8_4:+12658414 | Msa1314110:intron |
| ATTCAAGTTTGCTTCCTTCA+TGG | 0.318609 | 8_4:+12659158 | Msa1314110:CDS |
| TCCAATGCTGCATCTGTTGC+AGG | 0.319630 | 8_4:-12656904 | None:intergenic |
| AGGTTGGTAGTCTTTAAATT+TGG | 0.335224 | 8_4:-12655652 | None:intergenic |
| AAACCTTTGGCTCAGGTTCT+CGG | 0.342037 | 8_4:-12655758 | None:intergenic |
| TTCCTCAGTGCAACAGTTCA+TGG | 0.344597 | 8_4:+12658449 | Msa1314110:CDS |
| TCCTCGTTTGCCGGTATAAA+GGG | 0.344631 | 8_4:-12660006 | None:intergenic |
| AGGTGTTTCTTTGGCAGGGG+GGG | 0.357912 | 8_4:-12655694 | None:intergenic |
| TCTAACTTGGGAGGGCCATT+TGG | 0.359234 | 8_4:+12658938 | Msa1314110:CDS |
| GGGGCAGGTGTTTCTTTGGC+AGG | 0.360138 | 8_4:-12655699 | None:intergenic |
| GAATAAAATATGTTCTGGTT+TGG | 0.365503 | 8_4:+12652256 | Msa1314110:five_prime_UTR |
| GCACTAGGTTTGGAAACCTT+TGG | 0.365510 | 8_4:-12655771 | None:intergenic |
| GGTATTTACCCATTTGGGTT+TGG | 0.366265 | 8_4:+12659840 | Msa1314110:three_prime_UTR |
| GTAGAAACCTCTGTCATTGT+AGG | 0.366946 | 8_4:-12655089 | None:intergenic |
| AGGAGGGTCGTTCCAGGTTC+AGG | 0.367321 | 8_4:+12659126 | Msa1314110:CDS |
| GAGAAGGCATTCCAATTTCC+TGG | 0.372925 | 8_4:-12655061 | None:intergenic |
| TGTTGCACTGAGGAACTTTA+CGG | 0.376887 | 8_4:-12658441 | None:intergenic |
| GCTGAGAGGAGGGTCGTTCC+AGG | 0.377664 | 8_4:+12659120 | Msa1314110:intron |
| AAGGGAATTGAGTACTTCAT+TGG | 0.378627 | 8_4:-12659772 | None:intergenic |
| GTTGCAGGCTTGGCCTTTGA+AGG | 0.378722 | 8_4:-12656889 | None:intergenic |
| GCAGGTGTTTCTTTGGCAGG+GGG | 0.389087 | 8_4:-12655696 | None:intergenic |
| CAGGTGTTTCTTTGGCAGGG+GGG | 0.391780 | 8_4:-12655695 | None:intergenic |
| TTAATAAGTGAGGGTAGTTA+AGG | 0.393436 | 8_4:+12659938 | Msa1314110:three_prime_UTR |
| GTTGATTGAAATTGGGAATA+CGG | 0.396719 | 8_4:-12652375 | None:intergenic |
| TACATTTACGGTGTCTAACT+TGG | 0.397045 | 8_4:+12658925 | Msa1314110:CDS |
| AGAAGCTATTCATCAGCTTC+AGG | 0.398231 | 8_4:+12653871 | Msa1314110:CDS |
| CTCCTCCTCTTCAACAGTTA+TGG | 0.400387 | 8_4:-12655622 | None:intergenic |
| CTCTGCCACCTCTTTCTTTG+GGG | 0.401954 | 8_4:-12655727 | None:intergenic |
| GAGAATGGAAAATTAGGGTT+TGG | 0.402078 | 8_4:-12652348 | None:intergenic |
| TTTACTCAATCACTCCAAAA+AGG | 0.402134 | 8_4:+12652410 | Msa1314110:CDS |
| GGCATTCTTGCAGTTGGATC+TGG | 0.402670 | 8_4:+12659001 | Msa1314110:CDS |
| GGATAAAGCTACAGTTGAAA+TGG | 0.405754 | 8_4:+12655350 | Msa1314110:intron |
| GGCAGGTGTTTCTTTGGCAG+GGG | 0.408904 | 8_4:-12655697 | None:intergenic |
| AGAAGGAATAAAATATGTTC+TGG | 0.413193 | 8_4:+12652251 | Msa1314110:five_prime_UTR |
| AGCCATTGTTGATTGAAATT+GGG | 0.417211 | 8_4:-12652382 | None:intergenic |
| TACAATCAACCAAACCCAAA+TGG | 0.417315 | 8_4:-12659849 | None:intergenic |
| AGCTCTACTCACAGTAAAGT+TGG | 0.427257 | 8_4:-12653536 | None:intergenic |
| AACCTTTGGCTCAGGTTCTC+GGG | 0.427453 | 8_4:-12655757 | None:intergenic |
| GGGCAGGTGTTTCTTTGGCA+GGG | 0.431792 | 8_4:-12655698 | None:intergenic |
| AATGTTAGATCCTCGTTTGC+CGG | 0.432998 | 8_4:-12660015 | None:intergenic |
| ATGTTCTGGTTTGGTTCGCT+GGG | 0.439265 | 8_4:+12652265 | Msa1314110:five_prime_UTR |
| ATTGTCAATCCTCCTCAATC+AGG | 0.442751 | 8_4:+12658980 | Msa1314110:CDS |
| CTCTCCAGCATCAAAGGAAC+GGG | 0.444384 | 8_4:+12655972 | Msa1314110:CDS |
| GCTCTACTCACAGTAAAGTT+GGG | 0.445964 | 8_4:-12653535 | None:intergenic |
| AAGAAAGGCCTCTCTACAAT+AGG | 0.446442 | 8_4:+12658740 | Msa1314110:CDS |
| CAGAACTGTTTGACTCCAAA+TGG | 0.450562 | 8_4:-12658953 | None:intergenic |
| GGGTGACATTGAAGATTACT+TGG | 0.457050 | 8_4:+12656016 | Msa1314110:CDS |
| GCGATGAGAATGGAAAATTA+GGG | 0.457612 | 8_4:-12652353 | None:intergenic |
| AATTCTTCAGCACCTGAACC+TGG | 0.459175 | 8_4:-12659138 | None:intergenic |
| AGTAAATGACCTTGTAATCA+AGG | 0.461192 | 8_4:+12657459 | Msa1314110:CDS |
| TTTGGCTCAGGTTCTCGGGC+AGG | 0.461889 | 8_4:-12655753 | None:intergenic |
| AAACATGTCCACCATGAAAA+GGG | 0.462770 | 8_4:+12653684 | Msa1314110:CDS |
| TTTGAATGCTTTCAACCATT+CGG | 0.463475 | 8_4:-12659698 | None:intergenic |
| GAAAATTAGGGTTTGGTGGT+AGG | 0.465830 | 8_4:-12652341 | None:intergenic |
| TGTGACCATCGTGTTATAGA+TGG | 0.466155 | 8_4:+12659195 | Msa1314110:CDS |
| GAAACATGTCCACCATGAAA+AGG | 0.467076 | 8_4:+12653683 | Msa1314110:CDS |
| ACAATCAACCAAACCCAAAT+GGG | 0.469375 | 8_4:-12659848 | None:intergenic |
| ATGTCCCGTTCCTTTGATGC+TGG | 0.469966 | 8_4:-12655976 | None:intergenic |
| TCATCACTCACCCTGACGAC+TGG | 0.474349 | 8_4:-12658633 | None:intergenic |
| GCCTGCAACAGATGCAGCAT+TGG | 0.477806 | 8_4:+12656903 | Msa1314110:CDS |
| ACCTTCCTTATCTGTGAGAC+AGG | 0.478537 | 8_4:-12656940 | None:intergenic |
| AGGTGAAGAGGTCAAACAAC+TGG | 0.481074 | 8_4:+12658760 | Msa1314110:CDS |
| CTTCCTGTAGTGAATTGAGT+TGG | 0.481234 | 8_4:-12657414 | None:intergenic |
| ATTGCAGGGAGGTACATTTA+CGG | 0.483044 | 8_4:+12658913 | Msa1314110:intron |
| TGGGAATACGGCGATGAGAA+TGG | 0.486829 | 8_4:-12652363 | None:intergenic |
| CAAATCAAGTAGAAGAAAGA+TGG | 0.486888 | 8_4:-12652309 | None:intergenic |
| GGTTTGGAAACCTTTGGCTC+AGG | 0.487224 | 8_4:-12655765 | None:intergenic |
| AATGGAAAATTAGGGTTTGG+TGG | 0.488060 | 8_4:-12652345 | None:intergenic |
| ATTCCAATTTCCTGGTGTGC+GGG | 0.488772 | 8_4:-12655053 | None:intergenic |
| TTCAGATCTTCCCGCACACC+AGG | 0.489849 | 8_4:+12655043 | Msa1314110:intron |
| CAATCAGGCATTCTTGCAGT+TGG | 0.490200 | 8_4:+12658995 | Msa1314110:CDS |
| ATCAAAGGAACGGGACATGA+TGG | 0.494988 | 8_4:+12655981 | Msa1314110:CDS |
| TCTGCCACCTCTTTCTTTGG+GGG | 0.497031 | 8_4:-12655726 | None:intergenic |
| CCCAAAGAAAGAGGTGGCAG+AGG | 0.500156 | 8_4:+12655728 | Msa1314110:CDS |
| CTTCCGCTAACTTTCTAGCA+AGG | 0.502435 | 8_4:-12655830 | None:intergenic |
| GCCAAAATAGTACGCAAGGA+AGG | 0.503159 | 8_4:+12655396 | Msa1314110:CDS |
| TTATTCTGTTCAGGGGCGGT+TGG | 0.504298 | 8_4:+12659673 | Msa1314110:intron |
| GATGTTCAGCCCAGAAATCC+TGG | 0.505812 | 8_4:+12652598 | Msa1314110:CDS |
| AGAGAATGCGCCCTTTATAC+CGG | 0.507801 | 8_4:+12659996 | Msa1314110:three_prime_UTR |
| GTTGTTGTAAAGTAAATAGA+AGG | 0.508096 | 8_4:+12659747 | Msa1314110:exon |
| GAAATGGAGTGCATGGAGGA+AGG | 0.508742 | 8_4:+12655366 | Msa1314110:CDS |
| TTGGTTATTGTTTAGATGTG+TGG | 0.512816 | 8_4:+12653455 | Msa1314110:intron |
| GAAGCAAAAGAGCACGGTCG+TGG | 0.512819 | 8_4:-12652561 | None:intergenic |
| TTCCTGTAGTGAATTGAGTT+GGG | 0.513526 | 8_4:-12657413 | None:intergenic |
| CAGGGGCGGTTGGTGCCGAA+TGG | 0.514208 | 8_4:+12659683 | Msa1314110:intron |
| AATATGCGATCTCCAGATGA+AGG | 0.516362 | 8_4:-12655798 | None:intergenic |
| TCCCCTTGCTAGAAAGTTAG+CGG | 0.519178 | 8_4:+12655827 | Msa1314110:CDS |
| GCAAGATGGTTGAAGAAAGA+AGG | 0.519361 | 8_4:+12655192 | Msa1314110:CDS |
| AAATTGATACCTTGATTACA+AGG | 0.521801 | 8_4:-12657468 | None:intergenic |
| AATTCACTACAGGAAGCTTC+TGG | 0.523451 | 8_4:+12657421 | Msa1314110:CDS |
| CCAAAATAGTACGCAAGGAA+GGG | 0.524979 | 8_4:+12655397 | Msa1314110:CDS |
| AAGGTCATTTACTGATATAC+GGG | 0.525787 | 8_4:-12657449 | None:intergenic |
| TTCGAGTGATATTGTAGGCG+GGG | 0.528209 | 8_4:+12659797 | Msa1314110:three_prime_UTR |
| AGAAGTTTCAGCACCTTCAA+AGG | 0.528812 | 8_4:+12656876 | Msa1314110:CDS |
| TTCCGCTAACTTTCTAGCAA+GGG | 0.529254 | 8_4:-12655829 | None:intergenic |
| CTATTTACTTTACAACAACA+TGG | 0.534858 | 8_4:-12659743 | None:intergenic |
| GTGAATCTCTCCAGCATCAA+AGG | 0.535928 | 8_4:+12655966 | Msa1314110:CDS |
| AGGGTTTGGTGGTAGGAGAT+CGG | 0.537815 | 8_4:-12652334 | None:intergenic |
| ACATTCCTGTCTCACAGATA+AGG | 0.542040 | 8_4:+12656935 | Msa1314110:CDS |
| CAAGTAGAAGAAAGATGGAA+AGG | 0.542056 | 8_4:-12652304 | None:intergenic |
| AAGTAGAAGAAAGATGGAAA+GGG | 0.542375 | 8_4:-12652303 | None:intergenic |
| ACATGATGGGCTCATTGTCA+AGG | 0.542805 | 8_4:+12655995 | Msa1314110:CDS |
| CTCTACTCACAGTAAAGTTG+GGG | 0.546273 | 8_4:-12653534 | None:intergenic |
| TTGCAGGATGCAGACAAGAA+AGG | 0.556815 | 8_4:+12658725 | Msa1314110:intron |
| CAAAATAGTACGCAAGGAAG+GGG | 0.556968 | 8_4:+12655398 | Msa1314110:CDS |
| TCAATAACCTCGTAATCTTG+GGG | 0.557251 | 8_4:-12658812 | None:intergenic |
| TTTCGAGTGATATTGTAGGC+GGG | 0.557615 | 8_4:+12659796 | Msa1314110:three_prime_UTR |
| TCAAAGGAACGGGACATGAT+GGG | 0.558825 | 8_4:+12655982 | Msa1314110:CDS |
| TTCCCAATTTCAATCAACAA+TGG | 0.560238 | 8_4:+12652380 | Msa1314110:exon |
| GAAGGTGATAAAGTTGCTCC+TGG | 0.563593 | 8_4:+12655210 | Msa1314110:CDS |
| TACAGTTGAAATGGAGTGCA+TGG | 0.567546 | 8_4:+12655359 | Msa1314110:CDS |
| ACTTCACAGAGCACTTCACC+AGG | 0.568892 | 8_4:-12655228 | None:intergenic |
| TGCCATAACTGTTGAAGAGG+AGG | 0.569710 | 8_4:+12655620 | Msa1314110:CDS |
| CTACATGAGCAGCTGAGAGG+AGG | 0.569746 | 8_4:+12659109 | Msa1314110:intron |
| CATTCCAATTTCCTGGTGTG+CGG | 0.570945 | 8_4:-12655054 | None:intergenic |
| TCTACTGTCAAATAGTAATG+AGG | 0.572402 | 8_4:-12657281 | None:intergenic |
| TCGAGTGATATTGTAGGCGG+GGG | 0.573870 | 8_4:+12659798 | Msa1314110:three_prime_UTR |
| TCCGCTAACTTTCTAGCAAG+GGG | 0.574238 | 8_4:-12655828 | None:intergenic |
| GTTGCCGTGCAGACTGATCA+TGG | 0.578156 | 8_4:+12658600 | Msa1314110:CDS |
| AATTGCCATAACTGTTGAAG+AGG | 0.578534 | 8_4:+12655617 | Msa1314110:CDS |
| TGCCCGAGAACCTGAGCCAA+AGG | 0.580580 | 8_4:+12655755 | Msa1314110:CDS |
| ACTGCAAGAATGCCTGATTG+AGG | 0.581001 | 8_4:-12658992 | None:intergenic |
| AACACGATGGTCACAGCTGA+GGG | 0.582499 | 8_4:-12659187 | None:intergenic |
| TAGATTCAGATGCTGAAGGT+TGG | 0.582981 | 8_4:-12655668 | None:intergenic |
| CATAACTGTTGAAGAGGAGG+AGG | 0.584805 | 8_4:+12655623 | Msa1314110:CDS |
| TCTGGCCAAAATAGTACGCA+AGG | 0.587465 | 8_4:+12655392 | Msa1314110:CDS |
| TTTACGGTGTCTAACTTGGG+AGG | 0.587524 | 8_4:+12658929 | Msa1314110:CDS |
| ACATTTACGGTGTCTAACTT+GGG | 0.589425 | 8_4:+12658926 | Msa1314110:CDS |
| TACCCAACTCAATTCACTAC+AGG | 0.589446 | 8_4:+12657411 | Msa1314110:CDS |
| CCTCTCTACAATAGGTGAAG+AGG | 0.590816 | 8_4:+12658748 | Msa1314110:CDS |
| AAAAGAAATTAAAGTTGGTG+AGG | 0.595032 | 8_4:+12655422 | Msa1314110:CDS |
| GCTGAGGGTCACGGCCATGA+AGG | 0.596120 | 8_4:-12659172 | None:intergenic |
| CATGATGGGCTCATTGTCAA+GGG | 0.598765 | 8_4:+12655996 | Msa1314110:CDS |
| TCTCTCCAGCATCAAAGGAA+CGG | 0.600935 | 8_4:+12655971 | Msa1314110:CDS |
| ATGGTCACAGCTGAGGGTCA+CGG | 0.602246 | 8_4:-12659181 | None:intergenic |
| TACATGAGCAGCTGAGAGGA+GGG | 0.604602 | 8_4:+12659110 | Msa1314110:intron |
| GTCATTGTAGGCGAGAGAGA+AGG | 0.607272 | 8_4:-12655077 | None:intergenic |
| GCCCTTTATACCGGCAAACG+AGG | 0.609405 | 8_4:+12660005 | Msa1314110:three_prime_UTR |
| GAAATTCACAGATTCTGTCA+AGG | 0.613361 | 8_4:+12653848 | Msa1314110:intron |
| TACTAGATCAACACAAGGTG+AGG | 0.613787 | 8_4:-12660090 | None:intergenic |
| GGTGACATTGAAGATTACTT+GGG | 0.617563 | 8_4:+12656017 | Msa1314110:CDS |
| TATCTGTGAGACAGGAATGT+CGG | 0.618827 | 8_4:-12656932 | None:intergenic |
| ATATGCGATCTCCAGATGAA+GGG | 0.618945 | 8_4:-12655797 | None:intergenic |
| CCTCTTCACCTATTGTAGAG+AGG | 0.619080 | 8_4:-12658748 | None:intergenic |
| AACCCAAATGGGTAAATACC+AGG | 0.630516 | 8_4:-12659837 | None:intergenic |
| GCAAGAATGCCTGATTGAGG+AGG | 0.631692 | 8_4:-12658989 | None:intergenic |
| TTACGGTGTCTAACTTGGGA+GGG | 0.636231 | 8_4:+12658930 | Msa1314110:CDS |
| AACATGTCCACCATGAAAAG+GGG | 0.636584 | 8_4:+12653685 | Msa1314110:CDS |
| TGCAGGGTAACATTGCAAGA+TGG | 0.637826 | 8_4:+12655178 | Msa1314110:intron |
| GCACTAGATTCAGATGCTGA+AGG | 0.638061 | 8_4:-12655672 | None:intergenic |
| CCATGAAAAGGGGTTATACG+AGG | 0.638287 | 8_4:+12653695 | Msa1314110:CDS |
| TCCTGTCTCACAGATAAGGA+AGG | 0.639176 | 8_4:+12656939 | Msa1314110:CDS |
| ACTATTTGTTCCAGTCGTCA+GGG | 0.639222 | 8_4:+12658623 | Msa1314110:CDS |
| CTTCTACATGAGCAGCTGAG+AGG | 0.641703 | 8_4:+12659106 | Msa1314110:intron |
| GAATGGTTGAAAGCATTCAA+AGG | 0.642860 | 8_4:+12659700 | Msa1314110:CDS |
| TAACACGATGGTCACAGCTG+AGG | 0.645143 | 8_4:-12659188 | None:intergenic |
| TAGTCCATGATCAGTCTGCA+CGG | 0.653738 | 8_4:-12658604 | None:intergenic |
| TATGCGATCTCCAGATGAAG+GGG | 0.654755 | 8_4:-12655796 | None:intergenic |
| TCACTACAGGAAGCTTCTGG+TGG | 0.659960 | 8_4:+12657424 | Msa1314110:CDS |
| CTTGAAACCCCAAGATTACG+AGG | 0.661258 | 8_4:+12658805 | Msa1314110:CDS |
| TGTTCTGGTTTGGTTCGCTG+GGG | 0.668574 | 8_4:+12652266 | Msa1314110:five_prime_UTR |
| CATGAAAAGGGGTTATACGA+GGG | 0.691926 | 8_4:+12653696 | Msa1314110:CDS |
| TCTCTCGCCTACAATGACAG+AGG | 0.702335 | 8_4:+12655082 | Msa1314110:CDS |
| ACATACGAAGCAAAAGAGCA+CGG | 0.707501 | 8_4:-12652567 | None:intergenic |
| AGTTGAAATGGAGTGCATGG+AGG | 0.708060 | 8_4:+12655362 | Msa1314110:CDS |
| TGATTGAGGAGGATTGACAA+TGG | 0.714213 | 8_4:-12658978 | None:intergenic |
| AATTACCATCTATAACACGA+TGG | 0.716880 | 8_4:-12659200 | None:intergenic |
| ATGCGATCTCCAGATGAAGG+GGG | 0.720720 | 8_4:-12655795 | None:intergenic |
| GTGCATACTAGATCAACACA+AGG | 0.740252 | 8_4:-12660095 | None:intergenic |
| TCTACTCACAGTAAAGTTGG+GGG | 0.744237 | 8_4:-12653533 | None:intergenic |
| GTCCATGAACTGTTGCACTG+AGG | 0.782686 | 8_4:-12658451 | None:intergenic |
| CATGTGTTGACAAACTCATG+AGG | 0.783544 | 8_4:+12657306 | Msa1314110:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAAATAAATATTATATTT+TGG | + | chr8_4:12654962-12654981 | Msa1314110:intron | 0.0% |
| !!! | TTAAATAAATATTATATTTT+GGG | + | chr8_4:12654963-12654982 | Msa1314110:intron | 0.0% |
| !!! | TAAAAAAAGTTTTTTTTAGT+TGG | + | chr8_4:12652706-12652725 | Msa1314110:intron | 10.0% |
| !! | AAAAAAATAGAAAAAAGAAT+AGG | - | chr8_4:12654939-12654958 | None:intergenic | 10.0% |
| !! | AATAATGTTATTATATATTG+TGG | + | chr8_4:12656368-12656387 | Msa1314110:intron | 10.0% |
| !! | ATAAAATCTATTTGTATAAT+AGG | - | chr8_4:12657363-12657382 | None:intergenic | 10.0% |
| !! | TAAATACTTAAATCAAAAAT+TGG | - | chr8_4:12659882-12659901 | None:intergenic | 10.0% |
| !!! | AAACACTAATTTTATTTTAT+TGG | + | chr8_4:12660065-12660084 | Msa1314110:three_prime_UTR | 10.0% |
| !!! | AAATAAAATAAAAAAGTACC+AGG | - | chr8_4:12652619-12652638 | None:intergenic | 15.0% |
| !! | TATGTATTAATAATTGTAGT+TGG | + | chr8_4:12653436-12653455 | Msa1314110:intron | 15.0% |
| !! | CTGAAACTTAAAATATTATT+AGG | + | chr8_4:12654170-12654189 | Msa1314110:intron | 15.0% |
| !!! | TACCTAAAAGTATAATTATT+TGG | + | chr8_4:12654861-12654880 | Msa1314110:intron | 15.0% |
| !! | TTTAAAGGAAAAAATAATTC+TGG | - | chr8_4:12655532-12655551 | None:intergenic | 15.0% |
| !!! | GTAAAATATATTGATAATAG+TGG | - | chr8_4:12657341-12657360 | None:intergenic | 15.0% |
| !!! | TTTTTAAAGTGATATTTTGT+TGG | + | chr8_4:12659540-12659559 | Msa1314110:intron | 15.0% |
| !!! | ATTTTGGTTATTAAAATTGT+AGG | - | chr8_4:12659617-12659636 | None:intergenic | 15.0% |
| !!! | TACAATTTTAATAACCAAAA+TGG | + | chr8_4:12659616-12659635 | Msa1314110:intron | 15.0% |
| !! | TTAAAAAAAGGAAAGAAAGA+AGG | + | chr8_4:12652234-12652253 | Msa1314110:five_prime_UTR | 20.0% |
| !!! | AATGCAATTTTTCATTTTCT+GGG | + | chr8_4:12652672-12652691 | Msa1314110:intron | 20.0% |
| !! | ATAAGAGAAACTATTAAGAA+AGG | + | chr8_4:12653160-12653179 | Msa1314110:intron | 20.0% |
| !!! | TTTAATAATCTATCACCTTT+TGG | + | chr8_4:12653342-12653361 | Msa1314110:intron | 20.0% |
| !! | TTCTATGAAAAAGAGAATTA+CGG | - | chr8_4:12653640-12653659 | None:intergenic | 20.0% |
| !!! | TTTTCATAGAAACTTTCATT+TGG | + | chr8_4:12653649-12653668 | Msa1314110:intron | 20.0% |
| !!! | TTTGTTTTCATGCTTTAAAA+TGG | + | chr8_4:12653779-12653798 | Msa1314110:intron | 20.0% |
| !!! | TTGTTTTCATGCTTTAAAAT+GGG | + | chr8_4:12653780-12653799 | Msa1314110:intron | 20.0% |
| !! | AACTTAAAATATTATTAGGC+AGG | + | chr8_4:12654174-12654193 | Msa1314110:intron | 20.0% |
| !! | ACTGTAAATTATCAATAGAA+TGG | + | chr8_4:12654246-12654265 | Msa1314110:intron | 20.0% |
| !!! | TATCATGAAGCTTTTTTAAT+GGG | + | chr8_4:12654359-12654378 | Msa1314110:intron | 20.0% |
| !! | AACAAATATAGTTGAAATTC+AGG | + | chr8_4:12654580-12654599 | Msa1314110:intron | 20.0% |
| !! | TTTACATAAATGTATTGAAG+AGG | - | chr8_4:12654705-12654724 | None:intergenic | 20.0% |
| !!! | CTCCAAATAATTATACTTTT+AGG | - | chr8_4:12654866-12654885 | None:intergenic | 20.0% |
| !! | AGAAAAAAGAATAGGAATTA+AGG | - | chr8_4:12654931-12654950 | None:intergenic | 20.0% |
| !! | AATGATTTCATTACCAAATA+TGG | + | chr8_4:12655011-12655030 | Msa1314110:intron | 20.0% |
| !! | ATAATCTATTACCTACAATA+CGG | - | chr8_4:12655137-12655156 | None:intergenic | 20.0% |
| !! | TTTATATTCAATGTAATCTC+TGG | - | chr8_4:12655275-12655294 | None:intergenic | 20.0% |
| !! | GTAAATTGTATTTCAAATGA+AGG | + | chr8_4:12655329-12655348 | Msa1314110:intron | 20.0% |
| !! | CAGAAAATTAATTGTTAACT+CGG | - | chr8_4:12656545-12656564 | None:intergenic | 20.0% |
| !! | TTGAATAATAAGGGTAAATA+TGG | + | chr8_4:12657826-12657845 | Msa1314110:intron | 20.0% |
| !! | TTTAAAAACTGTTAACTTAC+TGG | - | chr8_4:12658492-12658511 | None:intergenic | 20.0% |
| !!! | GTTAACAGTTTTTAAATGTA+TGG | + | chr8_4:12658496-12658515 | Msa1314110:intron | 20.0% |
| !! | ATAATAACAAATGTTCCATA+AGG | - | chr8_4:12658545-12658564 | None:intergenic | 20.0% |
| !! | AATGGAGCTAATAAATAAAA+AGG | - | chr8_4:12659051-12659070 | None:intergenic | 20.0% |
| !! | CTTAAATTTAAGTCACAAAA+GGG | - | chr8_4:12659309-12659328 | None:intergenic | 20.0% |
| !!! | ATTGACGTTTTTTAATTCAA+TGG | - | chr8_4:12659405-12659424 | None:intergenic | 20.0% |
| !!! | ATAGAGAACATTTAAAATTG+TGG | - | chr8_4:12659454-12659473 | None:intergenic | 20.0% |
| !! | GTTATTAAAATTGTAGGAAT+CGG | - | chr8_4:12659611-12659630 | None:intergenic | 20.0% |
| !!! | TGTAATCTTTTTAATAAGTG+AGG | + | chr8_4:12659928-12659947 | Msa1314110:three_prime_UTR | 20.0% |
| !!! | GTAATCTTTTTAATAAGTGA+GGG | + | chr8_4:12659929-12659948 | Msa1314110:three_prime_UTR | 20.0% |
| !! | TCAACTCAATTTATAATCTA+AGG | + | chr8_4:12660153-12660172 | Msa1314110:three_prime_UTR | 20.0% |
| ! | AGAAGGAATAAAATATGTTC+TGG | + | chr8_4:12652251-12652270 | Msa1314110:five_prime_UTR | 25.0% |
| !! | GAATAAAATATGTTCTGGTT+TGG | + | chr8_4:12652256-12652275 | Msa1314110:five_prime_UTR | 25.0% |
| ! | ATACGATTGAACAAAAACAA+GGG | - | chr8_4:12652453-12652472 | None:intergenic | 25.0% |
| ! | AATACGATTGAACAAAAACA+AGG | - | chr8_4:12652454-12652473 | None:intergenic | 25.0% |
| !! | GAATGCAATTTTTCATTTTC+TGG | + | chr8_4:12652671-12652690 | Msa1314110:intron | 25.0% |
| ! | TGATAGTATTATAGAGAGTT+GGG | + | chr8_4:12652788-12652807 | Msa1314110:intron | 25.0% |
| !! | ATACGATAGATTTTGTAGTA+AGG | + | chr8_4:12653011-12653030 | Msa1314110:intron | 25.0% |
| ! | AGATATTTGAGAGAATGTTA+TGG | + | chr8_4:12653212-12653231 | Msa1314110:intron | 25.0% |
| !! | ACCTTTTGGCAATATTATTT+AGG | + | chr8_4:12653356-12653375 | Msa1314110:intron | 25.0% |
| ! | TCCTAAATAATATTGCCAAA+AGG | - | chr8_4:12653360-12653379 | None:intergenic | 25.0% |
| ! | GCATCATATCATAATTCATA+AGG | - | chr8_4:12653384-12653403 | None:intergenic | 25.0% |
| ! | TCTATGAAAAAGAGAATTAC+GGG | - | chr8_4:12653639-12653658 | None:intergenic | 25.0% |
| !! | ATCTGTGAATTTCTTTTGAA+GGG | - | chr8_4:12653841-12653860 | None:intergenic | 25.0% |
| !! | AATCTGTGAATTTCTTTTGA+AGG | - | chr8_4:12653842-12653861 | None:intergenic | 25.0% |
| ! | TGGTTAAAATATTCATGAGT+TGG | + | chr8_4:12653972-12653991 | Msa1314110:intron | 25.0% |
| !!! | CTATCATGAAGCTTTTTTAA+TGG | + | chr8_4:12654358-12654377 | Msa1314110:intron | 25.0% |
| !!! | ATCATGAAGCTTTTTTAATG+GGG | + | chr8_4:12654360-12654379 | Msa1314110:intron | 25.0% |
| ! | AATAAGTTAAATGTAGCACA+GGG | - | chr8_4:12654557-12654576 | None:intergenic | 25.0% |
| ! | AAATAAGTTAAATGTAGCAC+AGG | - | chr8_4:12654558-12654577 | None:intergenic | 25.0% |
| ! | TATAAAATCCCTGTAACTTA+TGG | - | chr8_4:12654903-12654922 | None:intergenic | 25.0% |
| ! | ATTTACATATCATTTCACAC+AGG | - | chr8_4:12655315-12655334 | None:intergenic | 25.0% |
| !!! | AAAAGAAATTAAAGTTGGTG+AGG | + | chr8_4:12655422-12655441 | Msa1314110:CDS | 25.0% |
| ! | TTTCATAAGAGAAAAGAGTT+TGG | - | chr8_4:12655557-12655576 | None:intergenic | 25.0% |
| ! | GTTGTGTAATGTCATAAAAA+TGG | - | chr8_4:12655925-12655944 | None:intergenic | 25.0% |
| !! | ATTAATTTTCTGACCTCAAA+AGG | + | chr8_4:12656553-12656572 | Msa1314110:intron | 25.0% |
| !! | TTAATTTTCTGACCTCAAAA+GGG | + | chr8_4:12656554-12656573 | Msa1314110:intron | 25.0% |
| !!! | AACTTTGAAATGTGTTGTTT+TGG | + | chr8_4:12656626-12656645 | Msa1314110:intron | 25.0% |
| ! | TTATTACAGCTCATTAACTA+CGG | - | chr8_4:12656660-12656679 | None:intergenic | 25.0% |
| !! | CATCTTTAGTTGATTCATTT+AGG | + | chr8_4:12656744-12656763 | Msa1314110:intron | 25.0% |
| ! | TAGTATATCAAACAAGTCTT+TGG | + | chr8_4:12656962-12656981 | Msa1314110:intron | 25.0% |
| ! | AAATTGATACCTTGATTACA+AGG | - | chr8_4:12657471-12657490 | None:intergenic | 25.0% |
| !!! | AGCTTTTGCTTTGAATAATA+AGG | + | chr8_4:12657816-12657835 | Msa1314110:intron | 25.0% |
| !!! | GCTTTTGCTTTGAATAATAA+GGG | + | chr8_4:12657817-12657836 | Msa1314110:intron | 25.0% |
| !!! | TAAGCTAAAAGCTCTTTTTT+TGG | + | chr8_4:12658004-12658023 | Msa1314110:intron | 25.0% |
| !!! | AAGCTAAAAGCTCTTTTTTT+GGG | + | chr8_4:12658005-12658024 | Msa1314110:intron | 25.0% |
| ! | TCATAAGGAGATAGAAAAAA+TGG | - | chr8_4:12658060-12658079 | None:intergenic | 25.0% |
| ! | CTATCTCCTTATGAAATTAT+AGG | + | chr8_4:12658066-12658085 | Msa1314110:intron | 25.0% |
| !!! | AAATTTTTAACTCAAGACAG+TGG | + | chr8_4:12658161-12658180 | Msa1314110:intron | 25.0% |
| ! | AGTGATGATATAACAGAATT+AGG | - | chr8_4:12658242-12658261 | None:intergenic | 25.0% |
| !!! | TGTTATTATGTTTTTTGTGC+AGG | + | chr8_4:12658556-12658575 | Msa1314110:intron | 25.0% |
| ! | TCATTATGAGAAACAACAAA+TGG | - | chr8_4:12659069-12659088 | None:intergenic | 25.0% |
| ! | GCTTAAATTTAAGTCACAAA+AGG | - | chr8_4:12659310-12659329 | None:intergenic | 25.0% |
| !!! | TAAGCTTATTTTTGTGATCA+TGG | + | chr8_4:12659325-12659344 | Msa1314110:intron | 25.0% |
| !! | TTAAAGTGATATTTTGTTGG+AGG | + | chr8_4:12659543-12659562 | Msa1314110:intron | 25.0% |
| !! | TAAAGTGATATTTTGTTGGA+GGG | + | chr8_4:12659544-12659563 | Msa1314110:intron | 25.0% |
| ! | ATATGCTTATTATTCTGTTC+AGG | + | chr8_4:12659664-12659683 | Msa1314110:intron | 25.0% |
| ! | TATGCTTATTATTCTGTTCA+GGG | + | chr8_4:12659665-12659684 | Msa1314110:intron | 25.0% |
| ! | CTATTTACTTTACAACAACA+TGG | - | chr8_4:12659746-12659765 | None:intergenic | 25.0% |
| ! | GTTGTTGTAAAGTAAATAGA+AGG | + | chr8_4:12659747-12659766 | Msa1314110:exon | 25.0% |
| ! | TACAATATCACTCGAAAAAA+GGG | - | chr8_4:12659793-12659812 | None:intergenic | 25.0% |
| ! | CTTAAATCAAAAATTGGTCA+GGG | - | chr8_4:12659876-12659895 | None:intergenic | 25.0% |
| ! | ACTTAAATCAAAAATTGGTC+AGG | - | chr8_4:12659877-12659896 | None:intergenic | 25.0% |
| AAGTAGAAGAAAGATGGAAA+GGG | - | chr8_4:12652306-12652325 | None:intergenic | 30.0% | |
| CAAATCAAGTAGAAGAAAGA+TGG | - | chr8_4:12652312-12652331 | None:intergenic | 30.0% | |
| GTTGATTGAAATTGGGAATA+CGG | - | chr8_4:12652378-12652397 | None:intergenic | 30.0% | |
| TTCCCAATTTCAATCAACAA+TGG | + | chr8_4:12652380-12652399 | Msa1314110:exon | 30.0% | |
| ! | AGCCATTGTTGATTGAAATT+GGG | - | chr8_4:12652385-12652404 | None:intergenic | 30.0% |
| ! | AAGCCATTGTTGATTGAAAT+TGG | - | chr8_4:12652386-12652405 | None:intergenic | 30.0% |
| TTTACTCAATCACTCCAAAA+AGG | + | chr8_4:12652410-12652429 | Msa1314110:CDS | 30.0% | |
| TACGATTGAACAAAAACAAG+GGG | - | chr8_4:12652452-12652471 | None:intergenic | 30.0% | |
| !! | AAAAAAGTACCAGGATTTCT+GGG | - | chr8_4:12652610-12652629 | None:intergenic | 30.0% |
| !! | TAAAAAAGTACCAGGATTTC+TGG | - | chr8_4:12652611-12652630 | None:intergenic | 30.0% |
| ! | TTTTCATTTTCTGGGTTTGA+TGG | + | chr8_4:12652680-12652699 | Msa1314110:intron | 30.0% |
| CTGATAGTATTATAGAGAGT+TGG | + | chr8_4:12652787-12652806 | Msa1314110:intron | 30.0% | |
| GATAGTATTATAGAGAGTTG+GGG | + | chr8_4:12652789-12652808 | Msa1314110:intron | 30.0% | |
| ! | GTTTCGTAGATTTTGTAGTA+AGG | + | chr8_4:12652875-12652894 | Msa1314110:intron | 30.0% |
| TAGTCAAATTATAGAGGTTG+TGG | + | chr8_4:12653054-12653073 | Msa1314110:intron | 30.0% | |
| TTATCTACTCGTCTTAATAC+AGG | - | chr8_4:12653092-12653111 | None:intergenic | 30.0% | |
| AGGTCTAGAGATAAATGATT+TGG | + | chr8_4:12653180-12653199 | Msa1314110:intron | 30.0% | |
| ! | TTGTTGTTGTAATTTGCGAT+AGG | + | chr8_4:12653283-12653302 | Msa1314110:intron | 30.0% |
| TTGGTTATTGTTTAGATGTG+TGG | + | chr8_4:12653455-12653474 | Msa1314110:intron | 30.0% | |
| ATGATATGTCAAATGACAGA+TGG | - | chr8_4:12653933-12653952 | None:intergenic | 30.0% | |
| TGATCATATCTTAATTGCTC+TGG | + | chr8_4:12653952-12653971 | Msa1314110:intron | 30.0% | |
| AACTAGCTATAAAACCAAAG+AGG | - | chr8_4:12654004-12654023 | None:intergenic | 30.0% | |
| AAATATGATTGAGCGTCATT+TGG | - | chr8_4:12654093-12654112 | None:intergenic | 30.0% | |
| !!! | GTTCTGAAACTTATTTTCTG+TGG | + | chr8_4:12654131-12654150 | Msa1314110:intron | 30.0% |
| !! | GAAACTTATTTTCTGTGGTT+TGG | + | chr8_4:12654136-12654155 | Msa1314110:intron | 30.0% |
| !!! | TCATGAAGCTTTTTTAATGG+GGG | + | chr8_4:12654361-12654380 | Msa1314110:intron | 30.0% |
| AGCTCAGAATTCTAATGAAA+GGG | - | chr8_4:12654507-12654526 | None:intergenic | 30.0% | |
| AAGCTCAGAATTCTAATGAA+AGG | - | chr8_4:12654508-12654527 | None:intergenic | 30.0% | |
| CATTAGAATTCTGAGCTTAA+TGG | + | chr8_4:12654510-12654529 | Msa1314110:intron | 30.0% | |
| AATTCAGGATCTTAAAAACG+CGG | + | chr8_4:12654595-12654614 | Msa1314110:intron | 30.0% | |
| ! | AAATGTATTGAAGAGGTGTA+CGG | - | chr8_4:12654698-12654717 | None:intergenic | 30.0% |
| ! | TTCTGTTTTCCATAAGTTAC+AGG | + | chr8_4:12654891-12654910 | Msa1314110:intron | 30.0% |
| ! | TCTGTTTTCCATAAGTTACA+GGG | + | chr8_4:12654892-12654911 | Msa1314110:intron | 30.0% |
| GGGGAAAAAGAAATTAAAGT+TGG | + | chr8_4:12655417-12655436 | Msa1314110:CDS | 30.0% | |
| ! | GAAAAGAGTTTGGAGTTTAA+AGG | - | chr8_4:12655547-12655566 | None:intergenic | 30.0% |
| !! | CTTATGAAAAGTATCCATGT+TGG | + | chr8_4:12655568-12655587 | Msa1314110:intron | 30.0% |
| ! | ACGAGAAGATTTTCTTTCAT+AGG | + | chr8_4:12655593-12655612 | Msa1314110:intron | 30.0% |
| !! | AGGTTGGTAGTCTTTAAATT+TGG | - | chr8_4:12655655-12655674 | None:intergenic | 30.0% |
| TTACTAACACTTAAACACCA+TGG | + | chr8_4:12655866-12655885 | Msa1314110:intron | 30.0% | |
| AACAGAAAAATCTTCAACCA+TGG | - | chr8_4:12655886-12655905 | None:intergenic | 30.0% | |
| ACACAACTTCAAAACATAGT+GGG | - | chr8_4:12656135-12656154 | None:intergenic | 30.0% | |
| AACACAACTTCAAAACATAG+TGG | - | chr8_4:12656136-12656155 | None:intergenic | 30.0% | |
| !!! | CTATGTTTTGAAGTTGTGTT+TGG | + | chr8_4:12656136-12656155 | Msa1314110:intron | 30.0% |
| AACCTTCCATACAAATGTTA+TGG | + | chr8_4:12656269-12656288 | Msa1314110:intron | 30.0% | |
| TTCCATAACATTTGTATGGA+AGG | - | chr8_4:12656274-12656293 | None:intergenic | 30.0% | |
| TAGGTTCCATAACATTTGTA+TGG | - | chr8_4:12656278-12656297 | None:intergenic | 30.0% | |
| !! | AGAGCACGTTTTTGTTTAAT+AGG | - | chr8_4:12656297-12656316 | None:intergenic | 30.0% |
| TATTGTGGAAAAACTTGAAG+AGG | + | chr8_4:12656383-12656402 | Msa1314110:intron | 30.0% | |
| !! | TCCTTTCTTTGCTTTAGAAA+GGG | - | chr8_4:12656589-12656608 | None:intergenic | 30.0% |
| !!! | GAAATGTGTTGTTTTGGTTT+TGG | + | chr8_4:12656632-12656651 | Msa1314110:intron | 30.0% |
| ! | TCTGCTTAGTTGATTCATTT+AGG | + | chr8_4:12656688-12656707 | Msa1314110:intron | 30.0% |
| TCACAAATTGAGAACATATG+TGG | - | chr8_4:12657065-12657084 | None:intergenic | 30.0% | |
| ! | ATAGTCTTGCTCTATATTAC+TGG | + | chr8_4:12657108-12657127 | Msa1314110:intron | 30.0% |
| GCACAAGATATATTATGATC+AGG | - | chr8_4:12657173-12657192 | None:intergenic | 30.0% | |
| TCTACTGTCAAATAGTAATG+AGG | - | chr8_4:12657284-12657303 | None:intergenic | 30.0% | |
| AAGGTCATTTACTGATATAC+GGG | - | chr8_4:12657452-12657471 | None:intergenic | 30.0% | |
| CAAGGTCATTTACTGATATA+CGG | - | chr8_4:12657453-12657472 | None:intergenic | 30.0% | |
| AGTAAATGACCTTGTAATCA+AGG | + | chr8_4:12657459-12657478 | Msa1314110:CDS | 30.0% | |
| ! | TATCAAGCACACAGATATTT+TGG | - | chr8_4:12657499-12657518 | None:intergenic | 30.0% |
| GTTGTCTAATTAAGTAGAGA+AGG | + | chr8_4:12657564-12657583 | Msa1314110:intron | 30.0% | |
| TTGACAAAAAAAGCTCTGTT+TGG | - | chr8_4:12657975-12657994 | None:intergenic | 30.0% | |
| TGGAGTCCTATAATTTCATA+AGG | - | chr8_4:12658075-12658094 | None:intergenic | 30.0% | |
| !!! | TTGTTTTAGCCTGAAATTCA+TGG | - | chr8_4:12658095-12658114 | None:intergenic | 30.0% |
| TCAAGACAGTGGTTATTAAT+CGG | + | chr8_4:12658172-12658191 | Msa1314110:intron | 30.0% | |
| ! | ATCACTTCTTAACTTTTCAG+AGG | + | chr8_4:12658256-12658275 | Msa1314110:intron | 30.0% |
| ! | TCACTTCTTAACTTTTCAGA+GGG | + | chr8_4:12658257-12658276 | Msa1314110:intron | 30.0% |
| !!! | ATGCTTGCCTTTTTTATTAC+AGG | + | chr8_4:12658402-12658421 | Msa1314110:intron | 30.0% |
| CAAATTTGTGAATGACCTTA+TGG | + | chr8_4:12658527-12658546 | Msa1314110:intron | 30.0% | |
| GGTTGAGTTAGAATAAGTAA+AGG | - | chr8_4:12658690-12658709 | None:intergenic | 30.0% | |
| ! | CTGCAAATTTTGTGAATACA+AGG | - | chr8_4:12658711-12658730 | None:intergenic | 30.0% |
| CTTGTATTCACAAAATTTGC+AGG | + | chr8_4:12658709-12658728 | Msa1314110:intron | 30.0% | |
| TTCAATAACCTCGTAATCTT+GGG | - | chr8_4:12658816-12658835 | None:intergenic | 30.0% | |
| TGTTAATTCTTCCTGTTCAT+TGG | + | chr8_4:12658842-12658861 | Msa1314110:intron | 30.0% | |
| ! | GTACTAGTTTACGAATTGTT+TGG | + | chr8_4:12658881-12658900 | Msa1314110:intron | 30.0% |
| ! | TTTGGTTGATATACATTGCA+GGG | + | chr8_4:12658899-12658918 | Msa1314110:intron | 30.0% |
| AATTACCATCTATAACACGA+TGG | - | chr8_4:12659203-12659222 | None:intergenic | 30.0% | |
| CAATGACATAGATTACTTCA+CGG | + | chr8_4:12659267-12659286 | Msa1314110:intron | 30.0% | |
| !!! | AGGCATTTCATTAGTTTTGA+TGG | + | chr8_4:12659513-12659532 | Msa1314110:intron | 30.0% |
| !! | GGATGATTTAGCTCTTAAAT+TGG | - | chr8_4:12659590-12659609 | None:intergenic | 30.0% |
| ATGCTTATTATTCTGTTCAG+GGG | + | chr8_4:12659666-12659685 | Msa1314110:intron | 30.0% | |
| TTTGAATGCTTTCAACCATT+CGG | - | chr8_4:12659701-12659720 | None:intergenic | 30.0% | |
| CTACAATATCACTCGAAAAA+AGG | - | chr8_4:12659794-12659813 | None:intergenic | 30.0% | |
| !!! | CTTTTTTCGAGTGATATTGT+AGG | + | chr8_4:12659792-12659811 | Msa1314110:three_prime_UTR | 30.0% |
| TTAATAAGTGAGGGTAGTTA+AGG | + | chr8_4:12659938-12659957 | Msa1314110:three_prime_UTR | 30.0% | |
| ! | TCTTCTAAGAACATGATTTC+AGG | - | chr8_4:12659979-12659998 | None:intergenic | 30.0% |
| ! | CTAACATTTTCTGTGTTAGA+TGG | + | chr8_4:12660030-12660049 | Msa1314110:three_prime_UTR | 30.0% |
| CAAGTAGAAGAAAGATGGAA+AGG | - | chr8_4:12652307-12652326 | None:intergenic | 35.0% | |
| AATGGAAAATTAGGGTTTGG+TGG | - | chr8_4:12652348-12652367 | None:intergenic | 35.0% | |
| GAGAATGGAAAATTAGGGTT+TGG | - | chr8_4:12652351-12652370 | None:intergenic | 35.0% | |
| GCGATGAGAATGGAAAATTA+GGG | - | chr8_4:12652356-12652375 | None:intergenic | 35.0% | |
| ! | AGGTGAATGATTGACCTTTT+TGG | - | chr8_4:12652427-12652446 | None:intergenic | 35.0% |
| TTGAACAAAAACAAGGGGAA+AGG | - | chr8_4:12652447-12652466 | None:intergenic | 35.0% | |
| !! | TTCGTACATGTGTTTTGAAC+CGG | + | chr8_4:12652737-12652756 | Msa1314110:intron | 35.0% |
| GAAACTTGTCTTAGGTAGTT+CGG | + | chr8_4:12652838-12652857 | Msa1314110:intron | 35.0% | |
| AAACTTGTCTTAGGTAGTTC+GGG | + | chr8_4:12652839-12652858 | Msa1314110:intron | 35.0% | |
| AGTAAGGTGAGTAGATTAAC+TGG | + | chr8_4:12652891-12652910 | Msa1314110:intron | 35.0% | |
| AGTAAGGCAAGTAGAATAGA+TGG | + | chr8_4:12653027-12653046 | Msa1314110:intron | 35.0% | |
| GGAGGATAGTCAAATTATAG+AGG | + | chr8_4:12653048-12653067 | Msa1314110:intron | 35.0% | |
| AAGACGAGTAGATAAGATGA+AGG | + | chr8_4:12653097-12653116 | Msa1314110:intron | 35.0% | |
| AGACGAGTAGATAAGATGAA+GGG | + | chr8_4:12653098-12653117 | Msa1314110:intron | 35.0% | |
| AAACATGTCCACCATGAAAA+GGG | + | chr8_4:12653684-12653703 | Msa1314110:CDS | 35.0% | |
| !! | TGAATTTCTTTTGAAGGGCA+TGG | - | chr8_4:12653836-12653855 | None:intergenic | 35.0% |
| GAAATTCACAGATTCTGTCA+AGG | + | chr8_4:12653848-12653867 | Msa1314110:intron | 35.0% | |
| AGGTACAGTTCATGATTCTT+TGG | + | chr8_4:12653891-12653910 | Msa1314110:intron | 35.0% | |
| !!! | CATGAAGCTTTTTTAATGGG+GGG | + | chr8_4:12654362-12654381 | Msa1314110:intron | 35.0% |
| !!! | CTTTTTTAATGGGGGGTTTT+TGG | + | chr8_4:12654369-12654388 | Msa1314110:intron | 35.0% |
| GTATCCTTCAAAATGTGTCA+TGG | + | chr8_4:12654405-12654424 | Msa1314110:intron | 35.0% | |
| TCCTAAAAGCTTAAGTCAGT+AGG | + | chr8_4:12654445-12654464 | Msa1314110:intron | 35.0% | |
| !!! | ACCTACTGACTTAAGCTTTT+AGG | - | chr8_4:12654449-12654468 | None:intergenic | 35.0% |
| AATGTAGCACAGGGTATAAT+AGG | - | chr8_4:12654548-12654567 | None:intergenic | 35.0% | |
| GATCTTAAAAACGCGGTAAT+AGG | + | chr8_4:12654602-12654621 | Msa1314110:intron | 35.0% | |
| ! | CCAAAAAGCTTAAGCGTTTT+AGG | - | chr8_4:12654658-12654677 | None:intergenic | 35.0% |
| ! | CCTAAAACGCTTAAGCTTTT+TGG | + | chr8_4:12654655-12654674 | Msa1314110:intron | 35.0% |
| ! | AAAACGCTTAAGCTTTTTGG+CGG | + | chr8_4:12654658-12654677 | Msa1314110:intron | 35.0% |
| ! | GAAAGATTCGGTTATGTACT+TGG | + | chr8_4:12654834-12654853 | Msa1314110:intron | 35.0% |
| TGAAAGATACTCGCCATATT+TGG | - | chr8_4:12655027-12655046 | None:intergenic | 35.0% | |
| ATGTTACCCTGCATATCATT+GGG | - | chr8_4:12655171-12655190 | None:intergenic | 35.0% | |
| AATGTTACCCTGCATATCAT+TGG | - | chr8_4:12655172-12655191 | None:intergenic | 35.0% | |
| TCTGTGAAGTTGAAACTGTA+TGG | + | chr8_4:12655241-12655260 | Msa1314110:intron | 35.0% | |
| GGATAAAGCTACAGTTGAAA+TGG | + | chr8_4:12655350-12655369 | Msa1314110:intron | 35.0% | |
| ! | GAACTTTCACCTTTTCTCTT+TGG | + | chr8_4:12655467-12655486 | Msa1314110:intron | 35.0% |
| !! | TTCACCTTTTCTCTTTGGAA+AGG | + | chr8_4:12655472-12655491 | Msa1314110:intron | 35.0% |
| !! | TCACCTTTTCTCTTTGGAAA+GGG | + | chr8_4:12655473-12655492 | Msa1314110:intron | 35.0% |
| AAATCTTCTCGTTACCAACA+TGG | - | chr8_4:12655585-12655604 | None:intergenic | 35.0% | |
| AATTGCCATAACTGTTGAAG+AGG | + | chr8_4:12655617-12655636 | Msa1314110:CDS | 35.0% | |
| GGTGACATTGAAGATTACTT+GGG | + | chr8_4:12656017-12656036 | Msa1314110:CDS | 35.0% | |
| TATTTACGTAGTATAGCCAG+TGG | + | chr8_4:12656075-12656094 | Msa1314110:intron | 35.0% | |
| ACAACTTCAAAACATAGTGG+GGG | - | chr8_4:12656133-12656152 | None:intergenic | 35.0% | |
| CACAACTTCAAAACATAGTG+GGG | - | chr8_4:12656134-12656153 | None:intergenic | 35.0% | |
| ! | CTGCACATCTTCTTTTATGT+TGG | + | chr8_4:12656315-12656334 | Msa1314110:intron | 35.0% |
| !! | CCTTTCTTTGCTTTAGAAAG+GGG | - | chr8_4:12656588-12656607 | None:intergenic | 35.0% |
| !! | CTCCTTTCTTTGCTTTAGAA+AGG | - | chr8_4:12656590-12656609 | None:intergenic | 35.0% |
| !! | CTTTCTAAAGCAAAGAAAGG+AGG | + | chr8_4:12656588-12656607 | Msa1314110:intron | 35.0% |
| CAAAGAAAGGAGGATATAGA+TGG | + | chr8_4:12656598-12656617 | Msa1314110:intron | 35.0% | |
| TGAAAGTGATTACAAGCACA+AGG | - | chr8_4:12656726-12656745 | None:intergenic | 35.0% | |
| TGAAAGTGATTACAAGCACA+AGG | - | chr8_4:12656726-12656745 | None:intergenic | 35.0% | |
| AGCTGCATTAGATGGTAAAA+AGG | - | chr8_4:12656845-12656864 | None:intergenic | 35.0% | |
| GAACCAAAGACCATTTGTTT+AGG | + | chr8_4:12657033-12657052 | Msa1314110:intron | 35.0% | |
| TGTCCTAAACAAATGGTCTT+TGG | - | chr8_4:12657039-12657058 | None:intergenic | 35.0% | |
| TTCCTGTAGTGAATTGAGTT+GGG | - | chr8_4:12657416-12657435 | None:intergenic | 35.0% | |
| CTAATTACCAACCAAAACAC+AGG | - | chr8_4:12657545-12657564 | None:intergenic | 35.0% | |
| AATCTAACCAAGCAAACACT+CGG | - | chr8_4:12657655-12657674 | None:intergenic | 35.0% | |
| ! | ACCTCTGTTATCTCTCTTTT+TGG | + | chr8_4:12657684-12657703 | Msa1314110:intron | 35.0% |
| TTTGGCCCCTTTATAAATTG+CGG | + | chr8_4:12657702-12657721 | Msa1314110:intron | 35.0% | |
| ACAGAGCCGCAATTTATAAA+GGG | - | chr8_4:12657711-12657730 | None:intergenic | 35.0% | |
| AACAGAGCCGCAATTTATAA+AGG | - | chr8_4:12657712-12657731 | None:intergenic | 35.0% | |
| TTATAAATTGCGGCTCTGTT+TGG | + | chr8_4:12657712-12657731 | Msa1314110:intron | 35.0% | |
| ! | GATAAGCTAGTTGAAGTGTT+TGG | + | chr8_4:12657779-12657798 | Msa1314110:intron | 35.0% |
| ACGAGCTTATAGCTTATTTC+AGG | - | chr8_4:12657927-12657946 | None:intergenic | 35.0% | |
| AAAAATGGAATAAGAGTCGC+AGG | - | chr8_4:12658045-12658064 | None:intergenic | 35.0% | |
| TATAGGACTCCATGAATTTC+AGG | + | chr8_4:12658083-12658102 | Msa1314110:intron | 35.0% | |
| ! | CACTTCTTAACTTTTCAGAG+GGG | + | chr8_4:12658258-12658277 | Msa1314110:intron | 35.0% |
| TCAATAACCTCGTAATCTTG+GGG | - | chr8_4:12658815-12658834 | None:intergenic | 35.0% | |
| CTTCAATAACCTCGTAATCT+TGG | - | chr8_4:12658817-12658836 | None:intergenic | 35.0% | |
| ! | GTTTGGTTGATATACATTGC+AGG | + | chr8_4:12658898-12658917 | Msa1314110:intron | 35.0% |
| TACATTTACGGTGTCTAACT+TGG | + | chr8_4:12658925-12658944 | Msa1314110:CDS | 35.0% | |
| ACATTTACGGTGTCTAACTT+GGG | + | chr8_4:12658926-12658945 | Msa1314110:CDS | 35.0% | |
| ! | ATTCAAGTTTGCTTCCTTCA+TGG | + | chr8_4:12659158-12659177 | Msa1314110:CDS | 35.0% |
| CTCGGACAATTACAATATCA+AGG | - | chr8_4:12659368-12659387 | None:intergenic | 35.0% | |
| ! | ATGGACTAAATTGTCAGACT+CGG | - | chr8_4:12659386-12659405 | None:intergenic | 35.0% |
| ATTGTTAGCATGTTTCTCTG+CGG | - | chr8_4:12659646-12659665 | None:intergenic | 35.0% | |
| !! | GAATGGTTGAAAGCATTCAA+AGG | + | chr8_4:12659700-12659719 | Msa1314110:CDS | 35.0% |
| CTTTACAACAACATGGTTTC+TGG | - | chr8_4:12659739-12659758 | None:intergenic | 35.0% | |
| AAGGGAATTGAGTACTTCAT+TGG | - | chr8_4:12659775-12659794 | None:intergenic | 35.0% | |
| !!! | TTTTCGAGTGATATTGTAGG+CGG | + | chr8_4:12659795-12659814 | Msa1314110:three_prime_UTR | 35.0% |
| ACAATCAACCAAACCCAAAT+GGG | - | chr8_4:12659851-12659870 | None:intergenic | 35.0% | |
| TACAATCAACCAAACCCAAA+TGG | - | chr8_4:12659852-12659871 | None:intergenic | 35.0% | |
| !! | GAAAATTAGGGTTTGGTGGT+AGG | - | chr8_4:12652344-12652363 | None:intergenic | 40.0% |
| GGCGATGAGAATGGAAAATT+AGG | - | chr8_4:12652357-12652376 | None:intergenic | 40.0% | |
| ACATACGAAGCAAAAGAGCA+CGG | - | chr8_4:12652570-12652589 | None:intergenic | 40.0% | |
| !! | TCGTACATGTGTTTTGAACC+GGG | + | chr8_4:12652738-12652757 | Msa1314110:intron | 40.0% |
| ATTATAGAGAGTTGGGGTAG+CGG | + | chr8_4:12652795-12652814 | Msa1314110:intron | 40.0% | |
| AGATGCTGGAAACTTGTCTT+AGG | + | chr8_4:12652830-12652849 | Msa1314110:intron | 40.0% | |
| AAGGTGAGTAGATTAACTGG+AGG | + | chr8_4:12652894-12652913 | Msa1314110:intron | 40.0% | |
| AGGTGAGTAGATTAACTGGA+GGG | + | chr8_4:12652895-12652914 | Msa1314110:intron | 40.0% | |
| CTACTATCTTTCTTTCCCTC+TGG | - | chr8_4:12652932-12652951 | None:intergenic | 40.0% | |
| AAAGCGAGTAGATCAGATGA+AGG | + | chr8_4:12652962-12652981 | Msa1314110:intron | 40.0% | |
| AAGCGAGTAGATCAGATGAA+GGG | + | chr8_4:12652963-12652982 | Msa1314110:intron | 40.0% | |
| AAGGGTAGTCAAATCACTAC+AGG | + | chr8_4:12652981-12653000 | Msa1314110:intron | 40.0% | |
| AGGGTAGTCAAATCACTACA+GGG | + | chr8_4:12652982-12653001 | Msa1314110:intron | 40.0% | |
| AAGGCAAGTAGAATAGATGG+AGG | + | chr8_4:12653030-12653049 | Msa1314110:intron | 40.0% | |
| AAGGGTAGTCAAATCCCTAA+AGG | + | chr8_4:12653116-12653135 | Msa1314110:intron | 40.0% | |
| TCTACTCACAGTAAAGTTGG+GGG | - | chr8_4:12653536-12653555 | None:intergenic | 40.0% | |
| CTCTACTCACAGTAAAGTTG+GGG | - | chr8_4:12653537-12653556 | None:intergenic | 40.0% | |
| GCTCTACTCACAGTAAAGTT+GGG | - | chr8_4:12653538-12653557 | None:intergenic | 40.0% | |
| AGCTCTACTCACAGTAAAGT+TGG | - | chr8_4:12653539-12653558 | None:intergenic | 40.0% | |
| ! | AGGGAGGGCGTAAAAAATAA+AGG | - | chr8_4:12653592-12653611 | None:intergenic | 40.0% |
| CAAGAACGTTAACTCACACA+GGG | - | chr8_4:12653611-12653630 | None:intergenic | 40.0% | |
| GAAACATGTCCACCATGAAA+AGG | + | chr8_4:12653683-12653702 | Msa1314110:CDS | 40.0% | |
| AACATGTCCACCATGAAAAG+GGG | + | chr8_4:12653685-12653704 | Msa1314110:CDS | 40.0% | |
| CATGAAAAGGGGTTATACGA+GGG | + | chr8_4:12653696-12653715 | Msa1314110:CDS | 40.0% | |
| !! | ATTTCTTTTGAAGGGCATGG+TGG | - | chr8_4:12653833-12653852 | None:intergenic | 40.0% |
| AGAAGCTATTCATCAGCTTC+AGG | + | chr8_4:12653871-12653890 | Msa1314110:CDS | 40.0% | |
| AGTCAACCATCCATAGATCT+AGG | + | chr8_4:12654040-12654059 | Msa1314110:intron | 40.0% | |
| GCAAATCCTAGATCTATGGA+TGG | - | chr8_4:12654049-12654068 | None:intergenic | 40.0% | |
| CGTTGCAAATCCTAGATCTA+TGG | - | chr8_4:12654053-12654072 | None:intergenic | 40.0% | |
| ! | TAGATCTAGGATTTGCAACG+TGG | + | chr8_4:12654053-12654072 | Msa1314110:intron | 40.0% |
| ! | AGATCTAGGATTTGCAACGT+GGG | + | chr8_4:12654054-12654073 | Msa1314110:intron | 40.0% |
| TAACAGTTCAAAAGCAGCAG+TGG | - | chr8_4:12654210-12654229 | None:intergenic | 40.0% | |
| AGAATGGAAAGTCTGCTCAA+TGG | + | chr8_4:12654262-12654281 | Msa1314110:intron | 40.0% | |
| !! | GAACTCATATTGATTCGCTC+AGG | - | chr8_4:12654309-12654328 | None:intergenic | 40.0% |
| CTTCATGATAGCTCAAACCA+TGG | - | chr8_4:12654349-12654368 | None:intergenic | 40.0% | |
| ! | CAAGCCATGACACATTTTGA+AGG | - | chr8_4:12654412-12654431 | None:intergenic | 40.0% |
| TCAAAATGTGTCATGGCTTG+TGG | + | chr8_4:12654412-12654431 | Msa1314110:intron | 40.0% | |
| !!! | CTTAAGCGTTTTAGGAGAGT+TGG | - | chr8_4:12654650-12654669 | None:intergenic | 40.0% |
| GTAGAAACCTCTGTCATTGT+AGG | - | chr8_4:12655092-12655111 | None:intergenic | 40.0% | |
| CCTACAATACGGCAATATCA+TGG | - | chr8_4:12655126-12655145 | None:intergenic | 40.0% | |
| CCATGATATTGCCGTATTGT+AGG | + | chr8_4:12655123-12655142 | Msa1314110:intron | 40.0% | |
| ! | ACTGATTCCCAATGATATGC+AGG | + | chr8_4:12655161-12655180 | Msa1314110:intron | 40.0% |
| CTGATTCCCAATGATATGCA+GGG | + | chr8_4:12655162-12655181 | Msa1314110:intron | 40.0% | |
| GCAAGATGGTTGAAGAAAGA+AGG | + | chr8_4:12655192-12655211 | Msa1314110:CDS | 40.0% | |
| TACAGTTGAAATGGAGTGCA+TGG | + | chr8_4:12655359-12655378 | Msa1314110:CDS | 40.0% | |
| CCAAAATAGTACGCAAGGAA+GGG | + | chr8_4:12655397-12655416 | Msa1314110:CDS | 40.0% | |
| CAAAATAGTACGCAAGGAAG+GGG | + | chr8_4:12655398-12655417 | Msa1314110:CDS | 40.0% | |
| TAGATTCAGATGCTGAAGGT+TGG | - | chr8_4:12655671-12655690 | None:intergenic | 40.0% | |
| ATATGCGATCTCCAGATGAA+GGG | - | chr8_4:12655800-12655819 | None:intergenic | 40.0% | |
| AATATGCGATCTCCAGATGA+AGG | - | chr8_4:12655801-12655820 | None:intergenic | 40.0% | |
| ! | TTCCGCTAACTTTCTAGCAA+GGG | - | chr8_4:12655832-12655851 | None:intergenic | 40.0% |
| CCTACATACATGAGGTAAAC+AGG | - | chr8_4:12655947-12655966 | None:intergenic | 40.0% | |
| CCTGTTTACCTCATGTATGT+AGG | + | chr8_4:12655944-12655963 | Msa1314110:intron | 40.0% | |
| GAGATTCACCTACATACATG+AGG | - | chr8_4:12655955-12655974 | None:intergenic | 40.0% | |
| GGGTGACATTGAAGATTACT+TGG | + | chr8_4:12656016-12656035 | Msa1314110:CDS | 40.0% | |
| AACAAAACCAGTTGAGAGCA+CGG | - | chr8_4:12656472-12656491 | None:intergenic | 40.0% | |
| ! | TGATGAGTTGTAGGTTGAAC+TGG | - | chr8_4:12656517-12656536 | None:intergenic | 40.0% |
| ! | GGGGTTATTATTCCCTTTTG+AGG | - | chr8_4:12656569-12656588 | None:intergenic | 40.0% |
| !! | CCCCTTTCTAAAGCAAAGAA+AGG | + | chr8_4:12656585-12656604 | Msa1314110:intron | 40.0% |
| TTACCATCTAATGCAGCTTC+TGG | + | chr8_4:12656847-12656866 | Msa1314110:intron | 40.0% | |
| AGAAGTTTCAGCACCTTCAA+AGG | + | chr8_4:12656876-12656895 | Msa1314110:CDS | 40.0% | |
| TATCTGTGAGACAGGAATGT+CGG | - | chr8_4:12656935-12656954 | None:intergenic | 40.0% | |
| ACATTCCTGTCTCACAGATA+AGG | + | chr8_4:12656935-12656954 | Msa1314110:CDS | 40.0% | |
| ! | CATGTGTTGACAAACTCATG+AGG | + | chr8_4:12657306-12657325 | Msa1314110:CDS | 40.0% |
| TACCCAACTCAATTCACTAC+AGG | + | chr8_4:12657411-12657430 | Msa1314110:CDS | 40.0% | |
| CTTCCTGTAGTGAATTGAGT+TGG | - | chr8_4:12657417-12657436 | None:intergenic | 40.0% | |
| AATTCACTACAGGAAGCTTC+TGG | + | chr8_4:12657421-12657440 | Msa1314110:CDS | 40.0% | |
| GCCAAAAAGAGAGATAACAG+AGG | - | chr8_4:12657688-12657707 | None:intergenic | 40.0% | |
| CAGAGCCGCAATTTATAAAG+GGG | - | chr8_4:12657710-12657729 | None:intergenic | 40.0% | |
| !! | GGTAACACTTTAGCTCTGTT+TGG | - | chr8_4:12657954-12657973 | None:intergenic | 40.0% |
| GCAGCAGCCTGTAATAAAAA+AGG | - | chr8_4:12658412-12658431 | None:intergenic | 40.0% | |
| ! | TTTATTACAGGCTGCTGCTT+TGG | + | chr8_4:12658414-12658433 | Msa1314110:intron | 40.0% |
| TGTTGCACTGAGGAACTTTA+CGG | - | chr8_4:12658444-12658463 | None:intergenic | 40.0% | |
| ACTATTTGTTCCAGTCGTCA+GGG | + | chr8_4:12658623-12658642 | Msa1314110:CDS | 40.0% | |
| AAGAAAGGCCTCTCTACAAT+AGG | + | chr8_4:12658740-12658759 | Msa1314110:CDS | 40.0% | |
| !! | GGGTTTCAAGCTGTTTTCTT+TGG | - | chr8_4:12658795-12658814 | None:intergenic | 40.0% |
| CTAGTACAAGACGTTGTCAT+TGG | - | chr8_4:12658868-12658887 | None:intergenic | 40.0% | |
| ! | ATTGCAGGGAGGTACATTTA+CGG | + | chr8_4:12658913-12658932 | Msa1314110:intron | 40.0% |
| CAGAACTGTTTGACTCCAAA+TGG | - | chr8_4:12658956-12658975 | None:intergenic | 40.0% | |
| TGATTGAGGAGGATTGACAA+TGG | - | chr8_4:12658981-12659000 | None:intergenic | 40.0% | |
| ATTGTCAATCCTCCTCAATC+AGG | + | chr8_4:12658980-12658999 | Msa1314110:CDS | 40.0% | |
| TGTGACCATCGTGTTATAGA+TGG | + | chr8_4:12659195-12659214 | Msa1314110:CDS | 40.0% | |
| TAGATTACTTCACGGTTTCG+AGG | + | chr8_4:12659275-12659294 | Msa1314110:intron | 40.0% | |
| CAAGAGAGAAGCTAATATGC+AGG | + | chr8_4:12659493-12659512 | Msa1314110:intron | 40.0% | |
| CTTATTATTCTGTTCAGGGG+CGG | + | chr8_4:12659669-12659688 | Msa1314110:intron | 40.0% | |
| ! | TTTCGAGTGATATTGTAGGC+GGG | + | chr8_4:12659796-12659815 | Msa1314110:three_prime_UTR | 40.0% |
| ! | GGATAAGGTTTTTGATCACC+TGG | + | chr8_4:12659819-12659838 | Msa1314110:three_prime_UTR | 40.0% |
| TCACCTGGTATTTACCCATT+TGG | + | chr8_4:12659834-12659853 | Msa1314110:three_prime_UTR | 40.0% | |
| CACCTGGTATTTACCCATTT+GGG | + | chr8_4:12659835-12659854 | Msa1314110:three_prime_UTR | 40.0% | |
| AACCCAAATGGGTAAATACC+AGG | - | chr8_4:12659840-12659859 | None:intergenic | 40.0% | |
| ! | GGTATTTACCCATTTGGGTT+TGG | + | chr8_4:12659840-12659859 | Msa1314110:three_prime_UTR | 40.0% |
| AATGTTAGATCCTCGTTTGC+CGG | - | chr8_4:12660018-12660037 | None:intergenic | 40.0% | |
| TACTAGATCAACACAAGGTG+AGG | - | chr8_4:12660093-12660112 | None:intergenic | 40.0% | |
| GTGCATACTAGATCAACACA+AGG | - | chr8_4:12660098-12660117 | None:intergenic | 40.0% | |
| !! | TATGTTCTGGTTTGGTTCGC+TGG | + | chr8_4:12652264-12652283 | Msa1314110:five_prime_UTR | 45.0% |
| !! | ATGTTCTGGTTTGGTTCGCT+GGG | + | chr8_4:12652265-12652284 | Msa1314110:five_prime_UTR | 45.0% |
| !! | CATGTGTTTTGAACCGGGTA+AGG | + | chr8_4:12652743-12652762 | Msa1314110:intron | 45.0% |
| !! | ATATCCTGTCTAGCCTTACC+CGG | - | chr8_4:12652759-12652778 | None:intergenic | 45.0% |
| GGCTATCGTAGAAAAGATGC+TGG | + | chr8_4:12652816-12652835 | Msa1314110:intron | 45.0% | |
| AGGGTAGTCAAATCACCAGA+GGG | + | chr8_4:12652914-12652933 | Msa1314110:intron | 45.0% | |
| AGTCAAATCCCTAAAGGCAG+AGG | + | chr8_4:12653122-12653141 | Msa1314110:intron | 45.0% | |
| CAAGTCTTCCTCTGCCTTTA+GGG | - | chr8_4:12653133-12653152 | None:intergenic | 45.0% | |
| TTATCCCACTAAGTGAGCTC+AGG | - | chr8_4:12653256-12653275 | None:intergenic | 45.0% | |
| TGAGCTCACTTAGTGGGATA+AGG | + | chr8_4:12653255-12653274 | Msa1314110:intron | 45.0% | |
| TCACTTAGTGGGATAAGGCT+TGG | + | chr8_4:12653260-12653279 | Msa1314110:intron | 45.0% | |
| AACGTTAACTCACACAGGGA+GGG | - | chr8_4:12653607-12653626 | None:intergenic | 45.0% | |
| CCAAGAACGTTAACTCACAC+AGG | - | chr8_4:12653612-12653631 | None:intergenic | 45.0% | |
| CCTGTGTGAGTTAACGTTCT+TGG | + | chr8_4:12653609-12653628 | Msa1314110:intron | 45.0% | |
| ! | CGTATAACCCCTTTTCATGG+TGG | - | chr8_4:12653695-12653714 | None:intergenic | 45.0% |
| ! | CCTCGTATAACCCCTTTTCA+TGG | - | chr8_4:12653698-12653717 | None:intergenic | 45.0% |
| CCATGAAAAGGGGTTATACG+AGG | + | chr8_4:12653695-12653714 | Msa1314110:CDS | 45.0% | |
| !! | TGAGTTGGTCTGTTCCTCTT+TGG | + | chr8_4:12653987-12654006 | Msa1314110:intron | 45.0% |
| CATGGTCAAGAACACTAGTC+AGG | - | chr8_4:12654331-12654350 | None:intergenic | 45.0% | |
| CTGACTAGTGTTCTTGACCA+TGG | + | chr8_4:12654329-12654348 | Msa1314110:intron | 45.0% | |
| AGGAGAGTTGGACTTTGACA+TGG | - | chr8_4:12654638-12654657 | None:intergenic | 45.0% | |
| AAGACTCGGCATGAAGTGAA+AGG | - | chr8_4:12654756-12654775 | None:intergenic | 45.0% | |
| ATTCCAATTTCCTGGTGTGC+GGG | - | chr8_4:12655056-12655075 | None:intergenic | 45.0% | |
| CATTCCAATTTCCTGGTGTG+CGG | - | chr8_4:12655057-12655076 | None:intergenic | 45.0% | |
| !! | GAGAAGGCATTCCAATTTCC+TGG | - | chr8_4:12655064-12655083 | None:intergenic | 45.0% |
| TGCAGGGTAACATTGCAAGA+TGG | + | chr8_4:12655178-12655197 | Msa1314110:intron | 45.0% | |
| GAAGGTGATAAAGTTGCTCC+TGG | + | chr8_4:12655210-12655229 | Msa1314110:CDS | 45.0% | |
| AGTTGAAATGGAGTGCATGG+AGG | + | chr8_4:12655362-12655381 | Msa1314110:CDS | 45.0% | |
| TCTGGCCAAAATAGTACGCA+AGG | + | chr8_4:12655392-12655411 | Msa1314110:CDS | 45.0% | |
| GCCAAAATAGTACGCAAGGA+AGG | + | chr8_4:12655396-12655415 | Msa1314110:CDS | 45.0% | |
| ! | CCCTTCCTTGCGTACTATTT+TGG | - | chr8_4:12655400-12655419 | None:intergenic | 45.0% |
| GAGCCCTTTCCAAAGAGAAA+AGG | - | chr8_4:12655479-12655498 | None:intergenic | 45.0% | |
| TGCCATAACTGTTGAAGAGG+AGG | + | chr8_4:12655620-12655639 | Msa1314110:CDS | 45.0% | |
| CTCCTCCTCTTCAACAGTTA+TGG | - | chr8_4:12655625-12655644 | None:intergenic | 45.0% | |
| CATAACTGTTGAAGAGGAGG+AGG | + | chr8_4:12655623-12655642 | Msa1314110:CDS | 45.0% | |
| GCACTAGATTCAGATGCTGA+AGG | - | chr8_4:12655675-12655694 | None:intergenic | 45.0% | |
| ! | AAACCTTTGGCTCAGGTTCT+CGG | - | chr8_4:12655761-12655780 | None:intergenic | 45.0% |
| GCACTAGGTTTGGAAACCTT+TGG | - | chr8_4:12655774-12655793 | None:intergenic | 45.0% | |
| TATGCGATCTCCAGATGAAG+GGG | - | chr8_4:12655799-12655818 | None:intergenic | 45.0% | |
| TCCCCTTGCTAGAAAGTTAG+CGG | + | chr8_4:12655827-12655846 | Msa1314110:CDS | 45.0% | |
| ! | TCCGCTAACTTTCTAGCAAG+GGG | - | chr8_4:12655831-12655850 | None:intergenic | 45.0% |
| ! | CTTCCGCTAACTTTCTAGCA+AGG | - | chr8_4:12655833-12655852 | None:intergenic | 45.0% |
| GTGAATCTCTCCAGCATCAA+AGG | + | chr8_4:12655966-12655985 | Msa1314110:CDS | 45.0% | |
| TCTCTCCAGCATCAAAGGAA+CGG | + | chr8_4:12655971-12655990 | Msa1314110:CDS | 45.0% | |
| ATCAAAGGAACGGGACATGA+TGG | + | chr8_4:12655981-12656000 | Msa1314110:CDS | 45.0% | |
| TCAAAGGAACGGGACATGAT+GGG | + | chr8_4:12655982-12656001 | Msa1314110:CDS | 45.0% | |
| !! | ACATGATGGGCTCATTGTCA+AGG | + | chr8_4:12655995-12656014 | Msa1314110:CDS | 45.0% |
| !! | CATGATGGGCTCATTGTCAA+GGG | + | chr8_4:12655996-12656015 | Msa1314110:CDS | 45.0% |
| TTACGTAGTATAGCCAGTGG+CGG | + | chr8_4:12656078-12656097 | Msa1314110:intron | 45.0% | |
| AGAACAGTGGAGTTCCAAGT+GGG | - | chr8_4:12656434-12656453 | None:intergenic | 45.0% | |
| GAATAAGCATGGGAGAACAG+TGG | - | chr8_4:12656447-12656466 | None:intergenic | 45.0% | |
| GAGCACGGTTGAATAAGCAT+GGG | - | chr8_4:12656457-12656476 | None:intergenic | 45.0% | |
| AGAGCACGGTTGAATAAGCA+TGG | - | chr8_4:12656458-12656477 | None:intergenic | 45.0% | |
| TATTCAACCGTGCTCTCAAC+TGG | + | chr8_4:12656462-12656481 | Msa1314110:intron | 45.0% | |
| ! | GAGTTGTAGGTTGAACTGGA+AGG | - | chr8_4:12656513-12656532 | None:intergenic | 45.0% |
| TCGGCAAACTGATGAGTTGT+AGG | - | chr8_4:12656526-12656545 | None:intergenic | 45.0% | |
| CAAGCACAAGGCTGAAATAG+TGG | - | chr8_4:12656714-12656733 | None:intergenic | 45.0% | |
| CAAGCACAAGGCTGAAATAG+CGG | - | chr8_4:12656714-12656733 | None:intergenic | 45.0% | |
| TCCTGTCTCACAGATAAGGA+AGG | + | chr8_4:12656939-12656958 | Msa1314110:CDS | 45.0% | |
| ACCTTCCTTATCTGTGAGAC+AGG | - | chr8_4:12656943-12656962 | None:intergenic | 45.0% | |
| GTGGCGTTGTCCTAAACAAA+TGG | - | chr8_4:12657046-12657065 | None:intergenic | 45.0% | |
| ! | CTTCCTTCGATCCTGTGTTT+TGG | + | chr8_4:12657531-12657550 | Msa1314110:intron | 45.0% |
| CAACCAAAACACAGGATCGA+AGG | - | chr8_4:12657537-12657556 | None:intergenic | 45.0% | |
| !!! | CTTCGATCCTGTGTTTTGGT+TGG | + | chr8_4:12657535-12657554 | Msa1314110:intron | 45.0% |
| ACAACATCCGAGTGTTTGCT+TGG | + | chr8_4:12657645-12657664 | Msa1314110:intron | 45.0% | |
| GAGAGATAACAGAGGTCTGA+GGG | - | chr8_4:12657680-12657699 | None:intergenic | 45.0% | |
| AGAGAGATAACAGAGGTCTG+AGG | - | chr8_4:12657681-12657700 | None:intergenic | 45.0% | |
| TTCCTCAGTGCAACAGTTCA+TGG | + | chr8_4:12658449-12658468 | Msa1314110:CDS | 45.0% | |
| TAGTCCATGATCAGTCTGCA+CGG | - | chr8_4:12658607-12658626 | None:intergenic | 45.0% | |
| GACTATTTGTTCCAGTCGTC+AGG | + | chr8_4:12658622-12658641 | Msa1314110:CDS | 45.0% | |
| TTGCAGGATGCAGACAAGAA+AGG | + | chr8_4:12658725-12658744 | Msa1314110:intron | 45.0% | |
| CCTCTTCACCTATTGTAGAG+AGG | - | chr8_4:12658751-12658770 | None:intergenic | 45.0% | |
| CCTCTCTACAATAGGTGAAG+AGG | + | chr8_4:12658748-12658767 | Msa1314110:CDS | 45.0% | |
| AGGTGAAGAGGTCAAACAAC+TGG | + | chr8_4:12658760-12658779 | Msa1314110:CDS | 45.0% | |
| CTTGAAACCCCAAGATTACG+AGG | + | chr8_4:12658805-12658824 | Msa1314110:CDS | 45.0% | |
| GTTGTCATTGGCCAATGAAC+AGG | - | chr8_4:12658856-12658875 | None:intergenic | 45.0% | |
| ! | GGTTGATATACATTGCAGGG+AGG | + | chr8_4:12658902-12658921 | Msa1314110:intron | 45.0% |
| TTTACGGTGTCTAACTTGGG+AGG | + | chr8_4:12658929-12658948 | Msa1314110:CDS | 45.0% | |
| TTACGGTGTCTAACTTGGGA+GGG | + | chr8_4:12658930-12658949 | Msa1314110:CDS | 45.0% | |
| ACTGCAAGAATGCCTGATTG+AGG | - | chr8_4:12658995-12659014 | None:intergenic | 45.0% | |
| CAATCAGGCATTCTTGCAGT+TGG | + | chr8_4:12658995-12659014 | Msa1314110:CDS | 45.0% | |
| AGCTGCTCATGTAGAAGCAA+AGG | - | chr8_4:12659103-12659122 | None:intergenic | 45.0% | |
| AATTCTTCAGCACCTGAACC+TGG | - | chr8_4:12659141-12659160 | None:intergenic | 45.0% | |
| ! | TTCTCTGCGGATCACCATTT+TGG | - | chr8_4:12659633-12659652 | None:intergenic | 45.0% |
| TTCGAGTGATATTGTAGGCG+GGG | + | chr8_4:12659797-12659816 | Msa1314110:three_prime_UTR | 45.0% | |
| AGAGAATGCGCCCTTTATAC+CGG | + | chr8_4:12659996-12660015 | Msa1314110:three_prime_UTR | 45.0% | |
| TCCTCGTTTGCCGGTATAAA+GGG | - | chr8_4:12660009-12660028 | None:intergenic | 45.0% | |
| ATCCTCGTTTGCCGGTATAA+AGG | - | chr8_4:12660010-12660029 | None:intergenic | 45.0% | |
| !!! | TAAGTTTTTTTTTTTTTTTT+TGG | + | chr8_4:12652493-12652512 | Msa1314110:intron | 5.0% |
| !! | ATACATAAAATAAAATATAA+AGG | - | chr8_4:12653423-12653442 | None:intergenic | 5.0% |
| !! | TGTTCTGGTTTGGTTCGCTG+GGG | + | chr8_4:12652266-12652285 | Msa1314110:five_prime_UTR | 50.0% |
| !! | AGGGTTTGGTGGTAGGAGAT+CGG | - | chr8_4:12652337-12652356 | None:intergenic | 50.0% |
| TGGGAATACGGCGATGAGAA+TGG | - | chr8_4:12652366-12652385 | None:intergenic | 50.0% | |
| GATGTTCAGCCCAGAAATCC+TGG | + | chr8_4:12652598-12652617 | Msa1314110:CDS | 50.0% | |
| TGTCTTAGGTAGTTCGGGCA+TGG | + | chr8_4:12652844-12652863 | Msa1314110:intron | 50.0% | |
| GAGGGTAGTCAAATCACCAG+AGG | + | chr8_4:12652913-12652932 | Msa1314110:intron | 50.0% | |
| CCAAGTCTTCCTCTGCCTTT+AGG | - | chr8_4:12653134-12653153 | None:intergenic | 50.0% | |
| CCTAAAGGCAGAGGAAGACT+TGG | + | chr8_4:12653131-12653150 | Msa1314110:intron | 50.0% | |
| ACTAAGTGAGCTCAGGCACA+TGG | - | chr8_4:12653249-12653268 | None:intergenic | 50.0% | |
| ATGTGCCTGAGCTCACTTAG+TGG | + | chr8_4:12653248-12653267 | Msa1314110:intron | 50.0% | |
| TGTGCCTGAGCTCACTTAGT+GGG | + | chr8_4:12653249-12653268 | Msa1314110:intron | 50.0% | |
| GAACGTTAACTCACACAGGG+AGG | - | chr8_4:12653608-12653627 | None:intergenic | 50.0% | |
| TAGGATTTGCAACGTGGGTG+AGG | + | chr8_4:12654059-12654078 | Msa1314110:intron | 50.0% | |
| GCAGACAGCAGTGTAAGACT+CGG | - | chr8_4:12654770-12654789 | None:intergenic | 50.0% | |
| AACTTGTGTCTGCCTCTCAC+AGG | + | chr8_4:12654811-12654830 | Msa1314110:intron | 50.0% | |
| ACTTGTGTCTGCCTCTCACA+GGG | + | chr8_4:12654812-12654831 | Msa1314110:intron | 50.0% | |
| GCCTCTCACAGGGAAAGATT+CGG | + | chr8_4:12654822-12654841 | Msa1314110:intron | 50.0% | |
| ACCGAATCTTTCCCTGTGAG+AGG | - | chr8_4:12654826-12654845 | None:intergenic | 50.0% | |
| GTCATTGTAGGCGAGAGAGA+AGG | - | chr8_4:12655080-12655099 | None:intergenic | 50.0% | |
| TCTCTCGCCTACAATGACAG+AGG | + | chr8_4:12655082-12655101 | Msa1314110:CDS | 50.0% | |
| ! | ACTTCACAGAGCACTTCACC+AGG | - | chr8_4:12655231-12655250 | None:intergenic | 50.0% |
| GAAATGGAGTGCATGGAGGA+AGG | + | chr8_4:12655366-12655385 | Msa1314110:CDS | 50.0% | |
| ! | GTGCATGGAGGAAGGTTTTC+TGG | + | chr8_4:12655374-12655393 | Msa1314110:CDS | 50.0% |
| TCTGCCACCTCTTTCTTTGG+GGG | - | chr8_4:12655729-12655748 | None:intergenic | 50.0% | |
| CTCTGCCACCTCTTTCTTTG+GGG | - | chr8_4:12655730-12655749 | None:intergenic | 50.0% | |
| CCTCTGCCACCTCTTTCTTT+GGG | - | chr8_4:12655731-12655750 | None:intergenic | 50.0% | |
| TCCTCTGCCACCTCTTTCTT+TGG | - | chr8_4:12655732-12655751 | None:intergenic | 50.0% | |
| ! | AACCTTTGGCTCAGGTTCTC+GGG | - | chr8_4:12655760-12655779 | None:intergenic | 50.0% |
| ! | GGTTTGGAAACCTTTGGCTC+AGG | - | chr8_4:12655768-12655787 | None:intergenic | 50.0% |
| ATGCGATCTCCAGATGAAGG+GGG | - | chr8_4:12655798-12655817 | None:intergenic | 50.0% | |
| CTCTCCAGCATCAAAGGAAC+GGG | + | chr8_4:12655972-12655991 | Msa1314110:CDS | 50.0% | |
| ATGTCCCGTTCCTTTGATGC+TGG | - | chr8_4:12655979-12655998 | None:intergenic | 50.0% | |
| TAAAAACCCAGCCACCCACT+TGG | + | chr8_4:12656417-12656436 | Msa1314110:intron | 50.0% | |
| GAGAACAGTGGAGTTCCAAG+TGG | - | chr8_4:12656435-12656454 | None:intergenic | 50.0% | |
| GCACCAGAAGCTGCATTAGA+TGG | - | chr8_4:12656853-12656872 | None:intergenic | 50.0% | |
| TCCAATGCTGCATCTGTTGC+AGG | - | chr8_4:12656907-12656926 | None:intergenic | 50.0% | |
| GGGTACGCAAACTGCAGATA+AGG | - | chr8_4:12657396-12657415 | None:intergenic | 50.0% | |
| TCACTACAGGAAGCTTCTGG+TGG | + | chr8_4:12657424-12657443 | Msa1314110:CDS | 50.0% | |
| TAAGAGTCGCAGGCTCTGTT+TGG | - | chr8_4:12658035-12658054 | None:intergenic | 50.0% | |
| ! | GAGCAGTGCATTAGTCTGTG+CGG | + | chr8_4:12658121-12658140 | Msa1314110:intron | 50.0% |
| TCTCTGCTGCACAAGACAGA+TGG | - | chr8_4:12658356-12658375 | None:intergenic | 50.0% | |
| GTCCATGAACTGTTGCACTG+AGG | - | chr8_4:12658454-12658473 | None:intergenic | 50.0% | |
| TCTAACTTGGGAGGGCCATT+TGG | + | chr8_4:12658938-12658957 | Msa1314110:CDS | 50.0% | |
| GCAAGAATGCCTGATTGAGG+AGG | - | chr8_4:12658992-12659011 | None:intergenic | 50.0% | |
| GGCATTCTTGCAGTTGGATC+TGG | + | chr8_4:12659001-12659020 | Msa1314110:CDS | 50.0% | |
| GCTCATGTAGAAGCAAAGGC+AGG | - | chr8_4:12659099-12659118 | None:intergenic | 50.0% | |
| CTTCTACATGAGCAGCTGAG+AGG | + | chr8_4:12659106-12659125 | Msa1314110:intron | 50.0% | |
| TACATGAGCAGCTGAGAGGA+GGG | + | chr8_4:12659110-12659129 | Msa1314110:intron | 50.0% | |
| AACACGATGGTCACAGCTGA+GGG | - | chr8_4:12659190-12659209 | None:intergenic | 50.0% | |
| TAACACGATGGTCACAGCTG+AGG | - | chr8_4:12659191-12659210 | None:intergenic | 50.0% | |
| TTATTCTGTTCAGGGGCGGT+TGG | + | chr8_4:12659673-12659692 | Msa1314110:intron | 50.0% | |
| TCGAGTGATATTGTAGGCGG+GGG | + | chr8_4:12659798-12659817 | Msa1314110:three_prime_UTR | 50.0% | |
| GATATTGTAGGCGGGGGATA+AGG | + | chr8_4:12659804-12659823 | Msa1314110:three_prime_UTR | 50.0% | |
| ! | GAAGCAAAAGAGCACGGTCG+TGG | - | chr8_4:12652564-12652583 | None:intergenic | 55.0% |
| TGAACCGGGTAAGGCTAGAC+AGG | + | chr8_4:12652752-12652771 | Msa1314110:intron | 55.0% | |
| TAGGTAGTTCGGGCATGGAG+AGG | + | chr8_4:12652849-12652868 | Msa1314110:intron | 55.0% | |
| AGGTAGTTCGGGCATGGAGA+GGG | + | chr8_4:12652850-12652869 | Msa1314110:intron | 55.0% | |
| TTCAGATCTTCCCGCACACC+AGG | + | chr8_4:12655043-12655062 | Msa1314110:intron | 55.0% | |
| CTTCCCGCACACCAGGAAAT+TGG | + | chr8_4:12655050-12655069 | Msa1314110:CDS | 55.0% | |
| AGGTGTTTCTTTGGCAGGGG+GGG | - | chr8_4:12655697-12655716 | None:intergenic | 55.0% | |
| CAGGTGTTTCTTTGGCAGGG+GGG | - | chr8_4:12655698-12655717 | None:intergenic | 55.0% | |
| GCAGGTGTTTCTTTGGCAGG+GGG | - | chr8_4:12655699-12655718 | None:intergenic | 55.0% | |
| GGCAGGTGTTTCTTTGGCAG+GGG | - | chr8_4:12655700-12655719 | None:intergenic | 55.0% | |
| GGGCAGGTGTTTCTTTGGCA+GGG | - | chr8_4:12655701-12655720 | None:intergenic | 55.0% | |
| AGGTGGGGCAGGTGTTTCTT+TGG | - | chr8_4:12655706-12655725 | None:intergenic | 55.0% | |
| ! | CTCTTTCTTTGGGGGAGGTG+GGG | - | chr8_4:12655721-12655740 | None:intergenic | 55.0% |
| ! | CCTCTTTCTTTGGGGGAGGT+GGG | - | chr8_4:12655722-12655741 | None:intergenic | 55.0% |
| ! | ACCTCTTTCTTTGGGGGAGG+TGG | - | chr8_4:12655723-12655742 | None:intergenic | 55.0% |
| ACCTCCCCCAAAGAAAGAGG+TGG | + | chr8_4:12655722-12655741 | Msa1314110:CDS | 55.0% | |
| CCCAAAGAAAGAGGTGGCAG+AGG | + | chr8_4:12655728-12655747 | Msa1314110:CDS | 55.0% | |
| ! | TGAAGGGGGTGCACTAGGTT+TGG | - | chr8_4:12655784-12655803 | None:intergenic | 55.0% |
| AGCCACGTATAGCCCTCTGT+GGG | + | chr8_4:12656101-12656120 | Msa1314110:intron | 55.0% | |
| ACAGTGGAGTTCCAAGTGGG+TGG | - | chr8_4:12656431-12656450 | None:intergenic | 55.0% | |
| ! | GTTGCAGGCTTGGCCTTTGA+AGG | - | chr8_4:12656892-12656911 | None:intergenic | 55.0% |
| TGCTGCATCTGTTGCAGGCT+TGG | - | chr8_4:12656902-12656921 | None:intergenic | 55.0% | |
| GCCTGCAACAGATGCAGCAT+TGG | + | chr8_4:12656903-12656922 | Msa1314110:CDS | 55.0% | |
| GTTGCCGTGCAGACTGATCA+TGG | + | chr8_4:12658600-12658619 | Msa1314110:CDS | 55.0% | |
| TCATCACTCACCCTGACGAC+TGG | - | chr8_4:12658636-12658655 | None:intergenic | 55.0% | |
| CTACATGAGCAGCTGAGAGG+AGG | + | chr8_4:12659109-12659128 | Msa1314110:intron | 55.0% | |
| ATGGTCACAGCTGAGGGTCA+CGG | - | chr8_4:12659184-12659203 | None:intergenic | 55.0% | |
| GCCCTTTATACCGGCAAACG+AGG | + | chr8_4:12660005-12660024 | Msa1314110:three_prime_UTR | 55.0% | |
| GGGGCAGGTGTTTCTTTGGC+AGG | - | chr8_4:12655702-12655721 | None:intergenic | 60.0% | |
| CCCACCTCCCCCAAAGAAAG+AGG | + | chr8_4:12655719-12655738 | Msa1314110:CDS | 60.0% | |
| ! | GCCACCTCTTTCTTTGGGGG+AGG | - | chr8_4:12655726-12655745 | None:intergenic | 60.0% |
| ! | TTTGGCTCAGGTTCTCGGGC+AGG | - | chr8_4:12655756-12655775 | None:intergenic | 60.0% |
| TGCCCGAGAACCTGAGCCAA+AGG | + | chr8_4:12655755-12655774 | Msa1314110:CDS | 60.0% | |
| ! | CCAGATGAAGGGGGTGCACT+AGG | - | chr8_4:12655789-12655808 | None:intergenic | 60.0% |
| CCTAGTGCACCCCCTTCATC+TGG | + | chr8_4:12655786-12655805 | Msa1314110:CDS | 60.0% | |
| GAGCCACGTATAGCCCTCTG+TGG | + | chr8_4:12656100-12656119 | Msa1314110:intron | 60.0% | |
| AGCCCACAGAGGGCTATACG+TGG | - | chr8_4:12656106-12656125 | None:intergenic | 60.0% | |
| GGAGTTCCAAGTGGGTGGCT+GGG | - | chr8_4:12656426-12656445 | None:intergenic | 60.0% | |
| TGGAGTTCCAAGTGGGTGGC+TGG | - | chr8_4:12656427-12656446 | None:intergenic | 60.0% | |
| AGGAGGGTCGTTCCAGGTTC+AGG | + | chr8_4:12659126-12659145 | Msa1314110:CDS | 60.0% | |
| ! | TTCTTTGGGGGAGGTGGGGC+AGG | - | chr8_4:12655717-12655736 | None:intergenic | 65.0% |
| GCTATACGTGGCTCCGCCAC+TGG | - | chr8_4:12656094-12656113 | None:intergenic | 65.0% | |
| ! | TGGGGGCACAAGCCCACAGA+GGG | - | chr8_4:12656116-12656135 | None:intergenic | 65.0% |
| GCTGAGAGGAGGGTCGTTCC+AGG | + | chr8_4:12659120-12659139 | Msa1314110:intron | 65.0% | |
| GCTGAGGGTCACGGCCATGA+AGG | - | chr8_4:12659175-12659194 | None:intergenic | 65.0% | |
| ! | GTGGGGGCACAAGCCCACAG+AGG | - | chr8_4:12656117-12656136 | None:intergenic | 70.0% |
| !! | CAGGGGCGGTTGGTGCCGAA+TGG | + | chr8_4:12659683-12659702 | Msa1314110:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 12652234 | 12660189 | 12652234 | ID=Msa1314110;Name=Msa1314110 |
| chr8_4 | mRNA | 12652234 | 12660189 | 12652234 | ID=Msa1314110-mRNA-1;Parent=Msa1314110;Name=Msa1314110-mRNA-1;_AED=0.14;_eAED=0.14;_QI=165|1|1|1|0.83|0.84|19|433|543 |
| chr8_4 | exon | 12652234 | 12652431 | 12652234 | ID=Msa1314110-mRNA-1:exon:4695;Parent=Msa1314110-mRNA-1 |
| chr8_4 | exon | 12652535 | 12652619 | 12652535 | ID=Msa1314110-mRNA-1:exon:4696;Parent=Msa1314110-mRNA-1 |
| chr8_4 | exon | 12653470 | 12653546 | 12653470 | ID=Msa1314110-mRNA-1:exon:4697;Parent=Msa1314110-mRNA-1 |
| chr8_4 | exon | 12653658 | 12653746 | 12653658 | ID=Msa1314110-mRNA-1:exon:4698;Parent=Msa1314110-mRNA-1 |
| chr8_4 | exon | 12653849 | 12653892 | 12653849 | ID=Msa1314110-mRNA-1:exon:4699;Parent=Msa1314110-mRNA-1 |
| chr8_4 | exon | 12655048 | 12655103 | 12655048 | ID=Msa1314110-mRNA-1:exon:4700;Parent=Msa1314110-mRNA-1 |
| chr8_4 | exon | 12655183 | 12655257 | 12655183 | ID=Msa1314110-mRNA-1:exon:4701;Parent=Msa1314110-mRNA-1 |
| chr8_4 | exon | 12655351 | 12655443 | 12655351 | ID=Msa1314110-mRNA-1:exon:4702;Parent=Msa1314110-mRNA-1 |
| chr8_4 | exon | 12655615 | 12655860 | 12655615 | ID=Msa1314110-mRNA-1:exon:4703;Parent=Msa1314110-mRNA-1 |
| chr8_4 | exon | 12655966 | 12656038 | 12655966 | ID=Msa1314110-mRNA-1:exon:4704;Parent=Msa1314110-mRNA-1 |
| chr8_4 | exon | 12656863 | 12656960 | 12656863 | ID=Msa1314110-mRNA-1:exon:4705;Parent=Msa1314110-mRNA-1 |
| chr8_4 | exon | 12657242 | 12657327 | 12657242 | ID=Msa1314110-mRNA-1:exon:4706;Parent=Msa1314110-mRNA-1 |
| chr8_4 | exon | 12657405 | 12657480 | 12657405 | ID=Msa1314110-mRNA-1:exon:4707;Parent=Msa1314110-mRNA-1 |
| chr8_4 | exon | 12658424 | 12658491 | 12658424 | ID=Msa1314110-mRNA-1:exon:4708;Parent=Msa1314110-mRNA-1 |
| chr8_4 | exon | 12658578 | 12658644 | 12658578 | ID=Msa1314110-mRNA-1:exon:4709;Parent=Msa1314110-mRNA-1 |
| chr8_4 | exon | 12658731 | 12658826 | 12658731 | ID=Msa1314110-mRNA-1:exon:4710;Parent=Msa1314110-mRNA-1 |
| chr8_4 | exon | 12658920 | 12659022 | 12658920 | ID=Msa1314110-mRNA-1:exon:4711;Parent=Msa1314110-mRNA-1 |
| chr8_4 | exon | 12659121 | 12659216 | 12659121 | ID=Msa1314110-mRNA-1:exon:4712;Parent=Msa1314110-mRNA-1 |
| chr8_4 | exon | 12659686 | 12660189 | 12659686 | ID=Msa1314110-mRNA-1:exon:4713;Parent=Msa1314110-mRNA-1 |
| chr8_4 | five_prime_UTR | 12652234 | 12652398 | 12652234 | ID=Msa1314110-mRNA-1:five_prime_utr;Parent=Msa1314110-mRNA-1 |
| chr8_4 | CDS | 12652399 | 12652431 | 12652399 | ID=Msa1314110-mRNA-1:cds;Parent=Msa1314110-mRNA-1 |
| chr8_4 | CDS | 12652535 | 12652619 | 12652535 | ID=Msa1314110-mRNA-1:cds;Parent=Msa1314110-mRNA-1 |
| chr8_4 | CDS | 12653470 | 12653546 | 12653470 | ID=Msa1314110-mRNA-1:cds;Parent=Msa1314110-mRNA-1 |
| chr8_4 | CDS | 12653658 | 12653746 | 12653658 | ID=Msa1314110-mRNA-1:cds;Parent=Msa1314110-mRNA-1 |
| chr8_4 | CDS | 12653849 | 12653892 | 12653849 | ID=Msa1314110-mRNA-1:cds;Parent=Msa1314110-mRNA-1 |
| chr8_4 | CDS | 12655048 | 12655103 | 12655048 | ID=Msa1314110-mRNA-1:cds;Parent=Msa1314110-mRNA-1 |
| chr8_4 | CDS | 12655183 | 12655257 | 12655183 | ID=Msa1314110-mRNA-1:cds;Parent=Msa1314110-mRNA-1 |
| chr8_4 | CDS | 12655351 | 12655443 | 12655351 | ID=Msa1314110-mRNA-1:cds;Parent=Msa1314110-mRNA-1 |
| chr8_4 | CDS | 12655615 | 12655860 | 12655615 | ID=Msa1314110-mRNA-1:cds;Parent=Msa1314110-mRNA-1 |
| chr8_4 | CDS | 12655966 | 12656038 | 12655966 | ID=Msa1314110-mRNA-1:cds;Parent=Msa1314110-mRNA-1 |
| chr8_4 | CDS | 12656863 | 12656960 | 12656863 | ID=Msa1314110-mRNA-1:cds;Parent=Msa1314110-mRNA-1 |
| chr8_4 | CDS | 12657242 | 12657327 | 12657242 | ID=Msa1314110-mRNA-1:cds;Parent=Msa1314110-mRNA-1 |
| chr8_4 | CDS | 12657405 | 12657480 | 12657405 | ID=Msa1314110-mRNA-1:cds;Parent=Msa1314110-mRNA-1 |
| chr8_4 | CDS | 12658424 | 12658491 | 12658424 | ID=Msa1314110-mRNA-1:cds;Parent=Msa1314110-mRNA-1 |
| chr8_4 | CDS | 12658578 | 12658644 | 12658578 | ID=Msa1314110-mRNA-1:cds;Parent=Msa1314110-mRNA-1 |
| chr8_4 | CDS | 12658731 | 12658826 | 12658731 | ID=Msa1314110-mRNA-1:cds;Parent=Msa1314110-mRNA-1 |
| chr8_4 | CDS | 12658920 | 12659022 | 12658920 | ID=Msa1314110-mRNA-1:cds;Parent=Msa1314110-mRNA-1 |
| chr8_4 | CDS | 12659121 | 12659216 | 12659121 | ID=Msa1314110-mRNA-1:cds;Parent=Msa1314110-mRNA-1 |
| chr8_4 | CDS | 12659686 | 12659756 | 12659686 | ID=Msa1314110-mRNA-1:cds;Parent=Msa1314110-mRNA-1 |
| chr8_4 | three_prime_UTR | 12659757 | 12660189 | 12659757 | ID=Msa1314110-mRNA-1:three_prime_utr;Parent=Msa1314110-mRNA-1 |
| Gene Sequence |
| Protein sequence |
