Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1223950 | XP_003610532.1 | 98.723 | 548 | 7 | 0 | 1 | 548 | 1 | 548 | 0.0 | 1084 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1223950 | sp|Q8LG88|TDT_ARATH | 64.037 | 545 | 178 | 5 | 1 | 534 | 1 | 538 | 0.0 | 701 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0746040 | Msa1223950 | 0.946472 | 4.326934e-105 | -8.615850e-47 |
| Msa1223950 | Msa1263200 | 0.978344 | 1.252824e-145 | -8.615850e-47 |
| Msa1223950 | Msa1302530 | 0.966765 | 2.321658e-126 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1223950 | MtrunA17_Chr4g0075801 | 98.723 | 548 | 7 | 0 | 1 | 548 | 1 | 548 | 0.0 | 1084 |
| Msa1223950 | MtrunA17_Chr2g0290091 | 78.817 | 524 | 104 | 4 | 19 | 536 | 6 | 528 | 0.0 | 839 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1223950 | AT5G47560.1 | 64.037 | 545 | 178 | 5 | 1 | 534 | 1 | 538 | 0.0 | 701 |
Find 151 sgRNAs with CRISPR-Local
Find 375 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACCATGTGTTGAAACTTAT+TGG | 0.130022 | 8_1:+88573771 | None:intergenic |
| CTGTTTCTGTTCCCTCTCTT+TGG | 0.149243 | 8_1:-88574877 | Msa1223950:CDS |
| AACAATTTCTATGTTCTTCT+TGG | 0.178098 | 8_1:-88575045 | Msa1223950:CDS |
| TATATTGGGTATCCACATTT+TGG | 0.179838 | 8_1:+88569992 | None:intergenic |
| CTTAGAAGATGCTCCATATT+TGG | 0.182122 | 8_1:-88571158 | Msa1223950:CDS |
| AGTAATATCTACATATATAT+TGG | 0.224636 | 8_1:+88569977 | None:intergenic |
| GAAATTGTTGAGGGTGAAAA+AGG | 0.235232 | 8_1:+88575059 | None:intergenic |
| CGATGTCATTACCCTTGTTT+TGG | 0.238022 | 8_1:-88574815 | Msa1223950:CDS |
| ACTGTGTTCTCCTGTCATTT+TGG | 0.263152 | 8_1:+88575179 | None:intergenic |
| CAGCTCCAAGTAACAAAATT+AGG | 0.271062 | 8_1:+88571248 | None:intergenic |
| AAGTGTCCTTTACTCAAATA+AGG | 0.271792 | 8_1:+88573651 | None:intergenic |
| GTGGTAGAAGTGGGGCCTTC+AGG | 0.287054 | 8_1:+88575118 | None:intergenic |
| GAATCCAGCGCTATTGTTAT+TGG | 0.299822 | 8_1:-88574054 | Msa1223950:CDS |
| GGTCTGCCACTTAAGGTTGC+TGG | 0.310572 | 8_1:-88570887 | Msa1223950:CDS |
| AAGGGTTGCTTTGTGTTCTA+TGG | 0.316415 | 8_1:+88575094 | None:intergenic |
| GCAGGAGCAATTGCCAAATA+TGG | 0.317007 | 8_1:+88571145 | None:intergenic |
| GGTGTAAATTTGATATTGAT+TGG | 0.317954 | 8_1:-88573825 | Msa1223950:CDS |
| TGCAGTTGCTGATCATATTA+TGG | 0.334276 | 8_1:-88571655 | Msa1223950:intron |
| AATCCAGCGCTATTGTTATT+GGG | 0.344059 | 8_1:-88574053 | Msa1223950:CDS |
| CAAAGTTGGTCTGCCACTTA+AGG | 0.364039 | 8_1:-88570894 | Msa1223950:CDS |
| CATGCTTGCTGTTATTGCTT+GGG | 0.364876 | 8_1:-88574956 | Msa1223950:CDS |
| CATGCATAGTCCTAGCTATA+TGG | 0.366936 | 8_1:+88571041 | None:intergenic |
| ACTCTTCCTTCAATAACTAT+AGG | 0.381828 | 8_1:+88569843 | None:intergenic |
| AGGATCACAGATGACATTCC+CGG | 0.395895 | 8_1:-88571623 | Msa1223950:CDS |
| CATGTTACGGCTATTGTTGT+TGG | 0.404683 | 8_1:+88574975 | None:intergenic |
| GTCTGCCACTTAAGGTTGCT+GGG | 0.407479 | 8_1:-88570886 | Msa1223950:CDS |
| ATGTTGATGCCGGTGGCCAC+AGG | 0.409144 | 8_1:-88573972 | Msa1223950:CDS |
| GTAATATCTACATATATATT+GGG | 0.412393 | 8_1:+88569978 | None:intergenic |
| AGAGGACACATAGAAGTAAC+AGG | 0.416408 | 8_1:+88574898 | None:intergenic |
| GAGAAGAAGAATGATTGTTA+AGG | 0.419127 | 8_1:+88575240 | None:intergenic |
| GTGGTTTATGCCGTGCCAAT+TGG | 0.419394 | 8_1:-88573873 | Msa1223950:CDS |
| GCCACCACCGTCGGAGCAAT+CGG | 0.421873 | 8_1:-88573934 | Msa1223950:CDS |
| CATGTCTTTCGCAGAGAAAA+TGG | 0.422210 | 8_1:-88571806 | Msa1223950:CDS |
| ACATGCTTGCTGTTATTGCT+TGG | 0.432445 | 8_1:-88574957 | Msa1223950:CDS |
| AATTCAGTTGCAATTGCTCC+TGG | 0.435589 | 8_1:+88570995 | None:intergenic |
| TAACAAAGAGACATATGAAA+AGG | 0.437864 | 8_1:+88575010 | None:intergenic |
| CATTTATGATTGAAAATTTG+AGG | 0.439221 | 8_1:-88570039 | Msa1223950:three_prime_UTR |
| CTTCAGGTTGAGGTTGATGT+TGG | 0.451414 | 8_1:+88575134 | None:intergenic |
| CTCTCTCCTTATTTGAGTAA+AGG | 0.456416 | 8_1:-88573657 | Msa1223950:CDS |
| ATGTTACGGCTATTGTTGTT+GGG | 0.457105 | 8_1:+88574976 | None:intergenic |
| TTCCATGGCCTTGTTGGTGA+TGG | 0.468327 | 8_1:-88571587 | Msa1223950:CDS |
| ATGTGGAAGAGTCTTGTTCC+TGG | 0.468609 | 8_1:-88573801 | Msa1223950:CDS |
| GAAGTGGGGCCTTCAGGTTG+AGG | 0.470925 | 8_1:+88575124 | None:intergenic |
| AAAAGGATTTGAGGTTGAAA+GGG | 0.471214 | 8_1:+88575076 | None:intergenic |
| GTTTATGCCGTGCCAATTGG+AGG | 0.471732 | 8_1:-88573870 | Msa1223950:CDS |
| ATATTACTAGGCAAAGGAGG+AGG | 0.478334 | 8_1:-88569962 | Msa1223950:three_prime_UTR |
| TACCGTTGCTCATTCTTACA+TGG | 0.479194 | 8_1:-88574839 | Msa1223950:CDS |
| ACAAGAGGGTGAGAAGCTAA+TGG | 0.479870 | 8_1:-88571302 | Msa1223950:CDS |
| CTGCTTGATTTACCTAAGGA+AGG | 0.481460 | 8_1:-88573694 | Msa1223950:CDS |
| GCAAATAATTTACCTAGAGA+TGG | 0.484625 | 8_1:+88570839 | None:intergenic |
| AAAGTACTCATCCCTCCAAT+TGG | 0.484679 | 8_1:+88573858 | None:intergenic |
| TCCGATTGCTCCGACGGTGG+TGG | 0.485794 | 8_1:+88573933 | None:intergenic |
| CAATAACAGCAAGCATGTTA+CGG | 0.494684 | 8_1:+88574962 | None:intergenic |
| TCAACTCCCTCAAATGTAGT+TGG | 0.495120 | 8_1:-88570953 | Msa1223950:CDS |
| TTCTCTGCTTGATTTACCTA+AGG | 0.497551 | 8_1:-88573698 | Msa1223950:CDS |
| AACTCCGATTGCTCCGACGG+TGG | 0.499273 | 8_1:+88573930 | None:intergenic |
| ACAAACCGTAAAACATAGAA+AGG | 0.503797 | 8_1:+88569768 | None:intergenic |
| AGCAAAACCAACTACATTTG+AGG | 0.505018 | 8_1:+88570946 | None:intergenic |
| GAGGTTGATGTTGGATTCAT+CGG | 0.508040 | 8_1:+88575143 | None:intergenic |
| TATTACTAGGCAAAGGAGGA+GGG | 0.510489 | 8_1:-88569961 | Msa1223950:three_prime_UTR |
| CACATAGAAGTAACAGGAAG+TGG | 0.512441 | 8_1:+88574904 | None:intergenic |
| ATTCAAGATACGCTCAAAGT+TGG | 0.514187 | 8_1:-88570908 | Msa1223950:CDS |
| ATATATATGTAGATATTACT+AGG | 0.515056 | 8_1:-88569974 | Msa1223950:three_prime_UTR |
| AACAAAGAGACATATGAAAA+GGG | 0.515332 | 8_1:+88575011 | None:intergenic |
| CTACAACGTTCACAGAAGAT+TGG | 0.516743 | 8_1:-88574761 | Msa1223950:CDS |
| ACCAACTCCGATTGCTCCGA+CGG | 0.521741 | 8_1:+88573927 | None:intergenic |
| GCAAAACCAACTACATTTGA+GGG | 0.523385 | 8_1:+88570947 | None:intergenic |
| TGTAACAGCCCTGTGGCCAC+CGG | 0.524138 | 8_1:+88573963 | None:intergenic |
| GGAGGGATGAGTACTTTGAC+AGG | 0.524697 | 8_1:-88573852 | Msa1223950:CDS |
| GCTATCCCAGCAACCTTAAG+TGG | 0.526924 | 8_1:+88570881 | None:intergenic |
| CCTCTTCTTCTTATGATCCC+AGG | 0.527608 | 8_1:-88571013 | Msa1223950:CDS |
| AACAATAGCGCTGGATTCAA+CGG | 0.528207 | 8_1:+88574059 | None:intergenic |
| AGTAACAAAATTAGGTTCCA+AGG | 0.528587 | 8_1:+88571256 | None:intergenic |
| CACAGATGACATTCCCGGAT+GGG | 0.530635 | 8_1:-88571618 | Msa1223950:CDS |
| CCCTAGCTGAGCCCTTCCTT+AGG | 0.531630 | 8_1:+88573682 | None:intergenic |
| ATGAGTACTTTGACAGGGAC+AGG | 0.531696 | 8_1:-88573846 | Msa1223950:CDS |
| TTCTATGGAGTGGTAGAAGT+GGG | 0.531994 | 8_1:+88575109 | None:intergenic |
| ACCTAAGGAAGGGCTCAGCT+AGG | 0.534237 | 8_1:-88573683 | Msa1223950:CDS |
| TTCCATCACCAACAAGGCCA+TGG | 0.535039 | 8_1:+88571585 | None:intergenic |
| TTACTAGGCAAAGGAGGAGG+GGG | 0.535083 | 8_1:-88569959 | Msa1223950:three_prime_UTR |
| AGCTGCCGTGATGTTGATGC+CGG | 0.539745 | 8_1:-88573982 | Msa1223950:CDS |
| TCATATTATGGATGACAAGA+AGG | 0.542160 | 8_1:-88571643 | Msa1223950:CDS |
| TGGCCACAGGGCTGTTACAG+CGG | 0.542397 | 8_1:-88573959 | Msa1223950:CDS |
| AGGGTGAGAAGCTAATGGAT+TGG | 0.543793 | 8_1:-88571297 | Msa1223950:CDS |
| CAGTAGAGCGGTGGTTCTAA+CGG | 0.547575 | 8_1:-88573895 | Msa1223950:CDS |
| AAGAACATAGAAATTGTTGA+GGG | 0.551725 | 8_1:+88575050 | None:intergenic |
| GAATGAAACTTCCCAAAACA+AGG | 0.552593 | 8_1:+88574803 | None:intergenic |
| TTGGAACAAATGGTGTCCAA+TGG | 0.555718 | 8_1:-88570144 | Msa1223950:CDS |
| ATGAATGCAAGAAATTACCT+TGG | 0.560679 | 8_1:-88571273 | Msa1223950:CDS |
| TGTTGATGCCGGTGGCCACA+GGG | 0.561507 | 8_1:-88573971 | Msa1223950:CDS |
| AGACCCAATAACAATAGCGC+TGG | 0.562343 | 8_1:+88574050 | None:intergenic |
| AATATTAAAACTTACGGTCA+AGG | 0.563166 | 8_1:+88574738 | None:intergenic |
| ATTACTAGGCAAAGGAGGAG+GGG | 0.565907 | 8_1:-88569960 | Msa1223950:three_prime_UTR |
| TGCTTGATTTACCTAAGGAA+GGG | 0.566581 | 8_1:-88573693 | Msa1223950:CDS |
| ATTTGATATTGATTGGAATG+TGG | 0.568501 | 8_1:-88573818 | Msa1223950:CDS |
| ATTCAGTTGCAATTGCTCCT+GGG | 0.570116 | 8_1:+88570996 | None:intergenic |
| CATATGAAAAGGGACAATAA+AGG | 0.573040 | 8_1:+88575021 | None:intergenic |
| AAGAGGGAATTAGAAGCTCT+AGG | 0.573141 | 8_1:-88573627 | Msa1223950:intron |
| CGTCATTCTTTGTGAGCATG+TGG | 0.577614 | 8_1:-88574019 | Msa1223950:CDS |
| GTGAACGTTGTAGCGTTCAA+CGG | 0.578386 | 8_1:+88574771 | None:intergenic |
| GCTGATGGAGTTCAATCTAG+TGG | 0.579028 | 8_1:-88571214 | Msa1223950:CDS |
| CTAGCTATATGGTATAGAAG+TGG | 0.579893 | 8_1:+88571052 | None:intergenic |
| ACAGATGACATTCCCGGATG+GGG | 0.580025 | 8_1:-88571617 | Msa1223950:CDS |
| AGGTGACATCAGTGTTCTGT+GGG | 0.581688 | 8_1:-88574085 | Msa1223950:CDS |
| CCTAAGGAAGGGCTCAGCTA+GGG | 0.582022 | 8_1:-88573682 | Msa1223950:CDS |
| CAGAAGCAATTCCAAAGAGA+GGG | 0.586284 | 8_1:+88574866 | None:intergenic |
| GAAGAACATAGAAATTGTTG+AGG | 0.589403 | 8_1:+88575049 | None:intergenic |
| TTTGATAATATAGGTTATGG+TGG | 0.589723 | 8_1:-88571356 | Msa1223950:intron |
| CCTGGGATCATAAGAAGAAG+AGG | 0.590839 | 8_1:+88571013 | None:intergenic |
| AACAGGAAGTGGTAAAGCAG+AGG | 0.593621 | 8_1:+88574915 | None:intergenic |
| AACCAATAAGTTTCAACACA+TGG | 0.595683 | 8_1:-88573773 | Msa1223950:CDS |
| ACCGTCGGAGCAATCGGAGT+TGG | 0.598580 | 8_1:-88573928 | Msa1223950:CDS |
| AATACCAAACAGAAAACAAG+AGG | 0.598893 | 8_1:-88571317 | Msa1223950:CDS |
| GCAGAAGCAATTCCAAAGAG+AGG | 0.598997 | 8_1:+88574865 | None:intergenic |
| CACTTCTATACCATATAGCT+AGG | 0.599715 | 8_1:-88571051 | Msa1223950:CDS |
| ACAGCGGCTGCCACCACCGT+CGG | 0.600123 | 8_1:-88573943 | Msa1223950:CDS |
| TAGCTATATGGTATAGAAGT+GGG | 0.604156 | 8_1:+88571053 | None:intergenic |
| GAGTAAAGGACACTTGAAGA+GGG | 0.605380 | 8_1:-88573643 | Msa1223950:CDS |
| TGAGTAAAGGACACTTGAAG+AGG | 0.607837 | 8_1:-88573644 | Msa1223950:CDS |
| TGCCGTGATGTTGATGCCGG+TGG | 0.610921 | 8_1:-88573979 | Msa1223950:CDS |
| AAGGTGACATCAGTGTTCTG+TGG | 0.613487 | 8_1:-88574086 | Msa1223950:CDS |
| CAACATCAACCTCAACCTGA+AGG | 0.615326 | 8_1:-88575133 | Msa1223950:CDS |
| TGGGATAATAAGTGTAGCAG+TGG | 0.618230 | 8_1:+88571072 | None:intergenic |
| TTGCTTTGTGTTCTATGGAG+TGG | 0.619478 | 8_1:+88575099 | None:intergenic |
| TAGATATTACTAGGCAAAGG+AGG | 0.621362 | 8_1:-88569965 | Msa1223950:three_prime_UTR |
| ATGTAGATATTACTAGGCAA+AGG | 0.622181 | 8_1:-88569968 | Msa1223950:three_prime_UTR |
| TCACAGATGACATTCCCGGA+TGG | 0.624095 | 8_1:-88571619 | Msa1223950:CDS |
| CTACTTATAAGACTAACTGC+AGG | 0.624428 | 8_1:+88571127 | None:intergenic |
| AAGAGAGGGAACAGAAACAG+AGG | 0.638570 | 8_1:+88574880 | None:intergenic |
| AGAAATCAATTTGTCAACCA+CGG | 0.638750 | 8_1:+88570103 | None:intergenic |
| TTTATGCCGTGCCAATTGGA+GGG | 0.639992 | 8_1:-88573869 | Msa1223950:CDS |
| CAGCCGCTGTAACAGCCCTG+TGG | 0.640090 | 8_1:+88573956 | None:intergenic |
| TGATTGTTAAGGTTGAGTGT+TGG | 0.642833 | 8_1:+88575251 | None:intergenic |
| GTTCTATGGAGTGGTAGAAG+TGG | 0.645537 | 8_1:+88575108 | None:intergenic |
| ACTCATCCCTCCAATTGGCA+CGG | 0.646058 | 8_1:+88573863 | None:intergenic |
| GGCCACCGGCATCAACATCA+CGG | 0.647085 | 8_1:+88573977 | None:intergenic |
| TAGAGCGGTGGTTCTAACGG+TGG | 0.651368 | 8_1:-88573892 | Msa1223950:CDS |
| GAATAAGTTCAGTAGAGCGG+TGG | 0.658888 | 8_1:-88573904 | Msa1223950:CDS |
| TCTATGGAGTGGTAGAAGTG+GGG | 0.659872 | 8_1:+88575110 | None:intergenic |
| TGACACTTCCATCACCAACA+AGG | 0.662968 | 8_1:+88571579 | None:intergenic |
| CCGTAAAACATAGAAAGGCA+CGG | 0.672086 | 8_1:+88569773 | None:intergenic |
| AATGAAACTTCCCAAAACAA+GGG | 0.680887 | 8_1:+88574804 | None:intergenic |
| ACATTTGAGGGAGTTGACGT+AGG | 0.681693 | 8_1:+88570959 | None:intergenic |
| GAGGGATGAGTACTTTGACA+GGG | 0.684482 | 8_1:-88573851 | Msa1223950:CDS |
| GTCCATGTAAGAATGAGCAA+CGG | 0.693112 | 8_1:+88574837 | None:intergenic |
| CATGCTCACAAAGAATGACG+TGG | 0.694517 | 8_1:+88574022 | None:intergenic |
| GGTGAATAAGTTCAGTAGAG+CGG | 0.695026 | 8_1:-88573907 | Msa1223950:CDS |
| TGCCAAACAAAATCTCTCCG+TGG | 0.711262 | 8_1:-88570120 | Msa1223950:CDS |
| ATACCAAACAGAAAACAAGA+GGG | 0.731604 | 8_1:-88571316 | Msa1223950:CDS |
| GAGCATGTGGATGCACAACG+TGG | 0.798016 | 8_1:-88574006 | Msa1223950:CDS |
| GGTGACATCAGTGTTCTGTG+GGG | 0.814024 | 8_1:-88574084 | Msa1223950:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAGAAAAATGTATAAATAA+AGG | - | chr8_1:88571887-88571906 | Msa1223950:intron | 10.0% |
| !! | AAGAAAAATGTATAAATAAA+GGG | - | chr8_1:88571888-88571907 | Msa1223950:intron | 10.0% |
| !!! | ATTTTTTGACAAAAAAAAAT+TGG | + | chr8_1:88572984-88573003 | None:intergenic | 10.0% |
| !!! | TTTTTAAAAAGTTGTAATAT+TGG | + | chr8_1:88573087-88573106 | None:intergenic | 10.0% |
| !! | TAGAGAAATATTAAAACTTA+CGG | + | chr8_1:88570247-88570266 | None:intergenic | 15.0% |
| !!! | TCATTCATATATAATTTTCT+TGG | + | chr8_1:88570653-88570672 | None:intergenic | 15.0% |
| !!! | TATATTTTTGAATGATTAGA+AGG | - | chr8_1:88570744-88570763 | Msa1223950:intron | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+CGG | + | chr8_1:88571952-88571971 | None:intergenic | 15.0% |
| !!! | AAGAAAAGTGTATAAATAAA+GGG | + | chr8_1:88571596-88571615 | None:intergenic | 15.0% |
| !!! | TAAGAAAAGTGTATAAATAA+AGG | + | chr8_1:88571597-88571616 | None:intergenic | 15.0% |
| !!! | TTATCTTTATATGACTTTTA+TGG | - | chr8_1:88571738-88571757 | Msa1223950:intron | 15.0% |
| !! | AGAAAAATGTATAAATAAAG+GGG | - | chr8_1:88571889-88571908 | Msa1223950:intron | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | - | chr8_1:88571952-88571971 | Msa1223950:intron | 15.0% |
| !! | ATTTAGTGTTATATTGTATT+GGG | - | chr8_1:88571953-88571972 | Msa1223950:intron | 15.0% |
| !! | TGATAAAAAAATATAGTCAA+TGG | + | chr8_1:88572471-88572490 | None:intergenic | 15.0% |
| !! | ATTAAAATTTAACTATGCTT+AGG | + | chr8_1:88572582-88572601 | None:intergenic | 15.0% |
| !!! | AAGAGTAAATTTTAGAATAT+TGG | + | chr8_1:88572672-88572691 | None:intergenic | 15.0% |
| !!! | TTTATTGATAATTCTGTAAT+TGG | - | chr8_1:88573133-88573152 | Msa1223950:intron | 15.0% |
| !!! | TTTGTCATTTTTGATAATAT+AGG | - | chr8_1:88573611-88573630 | Msa1223950:intron | 15.0% |
| !!! | ATTTTTGATAATATAGGTTA+TGG | - | chr8_1:88573617-88573636 | Msa1223950:intron | 15.0% |
| !!! | TTGATATTTCTAATTAAACT+AGG | + | chr8_1:88574333-88574352 | None:intergenic | 15.0% |
| !!! | ATTTTACTTGAATTTGAATT+TGG | - | chr8_1:88574399-88574418 | Msa1223950:intron | 15.0% |
| !!! | TTTTACTTGAATTTGAATTT+GGG | - | chr8_1:88574400-88574419 | Msa1223950:intron | 15.0% |
| !! | GTAATATCTACATATATATT+GGG | + | chr8_1:88575001-88575020 | None:intergenic | 15.0% |
| !! | AGTAATATCTACATATATAT+TGG | + | chr8_1:88575002-88575021 | None:intergenic | 15.0% |
| !! | ATATATATGTAGATATTACT+AGG | - | chr8_1:88575002-88575021 | Msa1223950:CDS | 15.0% |
| !! | CAAAAATCAATATTATTACA+AGG | + | chr8_1:88575239-88575258 | None:intergenic | 15.0% |
| !! | TCAATAAATAAAATTTCGAC+AGG | + | chr8_1:88570353-88570372 | None:intergenic | 20.0% |
| !! | TTTATTGATATGAAATCGTT+TGG | - | chr8_1:88570365-88570384 | Msa1223950:intron | 20.0% |
| !! | TGAATACTTGATTAAAAGTT+TGG | + | chr8_1:88570413-88570432 | None:intergenic | 20.0% |
| !!! | TTGTTTTTCTTATATGCTTT+TGG | - | chr8_1:88571251-88571270 | Msa1223950:CDS | 20.0% |
| !! | GTTGTATTGAAAATTGAAAT+GGG | + | chr8_1:88571986-88572005 | None:intergenic | 20.0% |
| !! | AGTTGTATTGAAAATTGAAA+TGG | + | chr8_1:88571985-88572004 | None:intergenic | 20.0% |
| !! | ATTTAGTGTTATATTGTATC+GGG | + | chr8_1:88571531-88571550 | None:intergenic | 20.0% |
| !! | AAAGTGGAATATATTGTATT+GGG | + | chr8_1:88571572-88571591 | None:intergenic | 20.0% |
| !!! | AGAAAAGTGTATAAATAAAG+GGG | + | chr8_1:88571595-88571614 | None:intergenic | 20.0% |
| !! | AAAGTGGAATATATTCTATT+GGG | - | chr8_1:88571912-88571931 | Msa1223950:intron | 20.0% |
| !! | AGTTGTATTGAAAATTGAAA+TGG | - | chr8_1:88571985-88572004 | Msa1223950:intron | 20.0% |
| !! | GTTGTATTGAAAATTGAAAT+GGG | - | chr8_1:88571986-88572005 | Msa1223950:intron | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+GGG | - | chr8_1:88572022-88572041 | Msa1223950:intron | 20.0% |
| !!! | AATTTAAAATGGGAACAAAT+GGG | + | chr8_1:88572396-88572415 | None:intergenic | 20.0% |
| !!! | AAATTTAAAATGGGAACAAA+TGG | + | chr8_1:88572397-88572416 | None:intergenic | 20.0% |
| !!! | CATTTTATATAGACACTAAT+GGG | + | chr8_1:88572519-88572538 | None:intergenic | 20.0% |
| !!! | ACATTTTATATAGACACTAA+TGG | + | chr8_1:88572520-88572539 | None:intergenic | 20.0% |
| !! | CTAAAAACATGACTAATATA+TGG | - | chr8_1:88572616-88572635 | Msa1223950:intron | 20.0% |
| !!! | TTCAATACTCACTTTTTTTT+AGG | + | chr8_1:88574682-88574701 | None:intergenic | 20.0% |
| !! | AAAAATTTGACTCAAAAGTA+TGG | + | chr8_1:88574725-88574744 | None:intergenic | 20.0% |
| !! | CATTTATGATTGAAAATTTG+AGG | - | chr8_1:88574937-88574956 | Msa1223950:CDS | 20.0% |
| ! | TTGGATAGAAAAAAGGAATT+GGG | + | chr8_1:88569781-88569800 | None:intergenic | 25.0% |
| ! | TTTGGATAGAAAAAAGGAAT+TGG | + | chr8_1:88569782-88569801 | None:intergenic | 25.0% |
| !!! | TGTCATTTTGGATAGAAAAA+AGG | + | chr8_1:88569788-88569807 | None:intergenic | 25.0% |
| !!! | TTTTTTCTATCCAAAATGAC+AGG | - | chr8_1:88569787-88569806 | Msa1223950:three_prime_UTR | 25.0% |
| ! | AAGAACATAGAAATTGTTGA+GGG | + | chr8_1:88569929-88569948 | None:intergenic | 25.0% |
| ! | AACAATTTCTATGTTCTTCT+TGG | - | chr8_1:88569931-88569950 | Msa1223950:three_prime_UTR | 25.0% |
| ! | AACAAAGAGACATATGAAAA+GGG | + | chr8_1:88569968-88569987 | None:intergenic | 25.0% |
| ! | TAACAAAGAGACATATGAAA+AGG | + | chr8_1:88569969-88569988 | None:intergenic | 25.0% |
| ! | AATATTAAAACTTACGGTCA+AGG | + | chr8_1:88570241-88570260 | None:intergenic | 25.0% |
| !!! | ATTCATTTTTAACCTCTCTA+TGG | - | chr8_1:88570437-88570456 | Msa1223950:intron | 25.0% |
| ! | GTATTGGATATGAAGAATTA+TGG | - | chr8_1:88570461-88570480 | Msa1223950:intron | 25.0% |
| ! | TATGAAGAATTATGGAATGT+TGG | - | chr8_1:88570469-88570488 | Msa1223950:intron | 25.0% |
| ! | AAAAGACCAAAAACTCAATT+TGG | + | chr8_1:88570676-88570695 | None:intergenic | 25.0% |
| !!! | TTTTTTTTATCCATTGATCG+TGG | - | chr8_1:88570693-88570712 | Msa1223950:intron | 25.0% |
| !!! | CAGAGTTTATTTATTTTGTG+AGG | - | chr8_1:88570768-88570787 | Msa1223950:intron | 25.0% |
| !!! | AGTTTATTTATTTTGTGAGG+TGG | - | chr8_1:88570771-88570790 | Msa1223950:intron | 25.0% |
| !!! | GTTTATTTATTTTGTGAGGT+GGG | - | chr8_1:88570772-88570791 | Msa1223950:intron | 25.0% |
| ! | AAATGATATATATTTCCGAC+CGG | - | chr8_1:88570833-88570852 | Msa1223950:intron | 25.0% |
| ! | GGTGTAAATTTGATATTGAT+TGG | - | chr8_1:88571151-88571170 | Msa1223950:CDS | 25.0% |
| !! | ATTTGATATTGATTGGAATG+TGG | - | chr8_1:88571158-88571177 | Msa1223950:CDS | 25.0% |
| !!! | TATCCTTCTTTTTCACATTA+TGG | - | chr8_1:88571398-88571417 | Msa1223950:intron | 25.0% |
| !!! | ATCCTTCTTTTTCACATTAT+GGG | - | chr8_1:88571399-88571418 | Msa1223950:intron | 25.0% |
| ! | GAAAGTGGAATATATTGTAT+TGG | + | chr8_1:88571573-88571592 | None:intergenic | 25.0% |
| ! | ATGATTAATTTCATGCACTT+AGG | - | chr8_1:88571676-88571695 | Msa1223950:intron | 25.0% |
| ! | AAGTTAAGTTCATTTGATCA+TGG | + | chr8_1:88571804-88571823 | None:intergenic | 25.0% |
| ! | GAAAGTGGAATATATTCTAT+TGG | - | chr8_1:88571911-88571930 | Msa1223950:intron | 25.0% |
| ! | TATTGAAAATTGAAATGGGT+CGG | - | chr8_1:88571990-88572009 | Msa1223950:intron | 25.0% |
| !!! | GGACACTTTTTTTTAGAAAA+TGG | - | chr8_1:88572021-88572040 | Msa1223950:intron | 25.0% |
| ! | GTGGCAATAAATCAATAATA+AGG | + | chr8_1:88572276-88572295 | None:intergenic | 25.0% |
| !!! | ATTATTGATTTATTGCCACA+TGG | - | chr8_1:88572277-88572296 | Msa1223950:intron | 25.0% |
| !! | ATTTAAAATGGGAACAAATG+GGG | + | chr8_1:88572395-88572414 | None:intergenic | 25.0% |
| ! | AGATAGATTTACTCATTTAC+AGG | + | chr8_1:88572548-88572567 | None:intergenic | 25.0% |
| ! | AAGAAAAGAAACAAAAGAAG+TGG | - | chr8_1:88572757-88572776 | Msa1223950:intron | 25.0% |
| ! | ACAATGAATACAATCTATCT+TGG | - | chr8_1:88572849-88572868 | Msa1223950:intron | 25.0% |
| ! | ATTGCAACAAGAACAAAATT+AGG | + | chr8_1:88572925-88572944 | None:intergenic | 25.0% |
| ! | AATATTTCATCAAACTCATG+TGG | - | chr8_1:88572947-88572966 | Msa1223950:intron | 25.0% |
| !! | GACAAAAAAAAATTGGTAAC+AGG | + | chr8_1:88572977-88572996 | None:intergenic | 25.0% |
| ! | AAAAGTTGTAATATTGGTCA+AGG | + | chr8_1:88573081-88573100 | None:intergenic | 25.0% |
| ! | GCTTCATTATCAATGTATTT+AGG | + | chr8_1:88573110-88573129 | None:intergenic | 25.0% |
| ! | TACTGCTTTAATTAATACGT+TGG | + | chr8_1:88573291-88573310 | None:intergenic | 25.0% |
| ! | AATTGATTGTTCACTATGAT+TGG | + | chr8_1:88573587-88573606 | None:intergenic | 25.0% |
| !! | TTTGATAATATAGGTTATGG+TGG | - | chr8_1:88573620-88573639 | Msa1223950:intron | 25.0% |
| ! | CTATTAAGAACTTAACAAAG+TGG | - | chr8_1:88574296-88574315 | Msa1223950:intron | 25.0% |
| ! | TGCCCAAATTGTATAAAAAA+AGG | - | chr8_1:88574484-88574503 | Msa1223950:intron | 25.0% |
| ! | GCCCAAATTGTATAAAAAAA+GGG | - | chr8_1:88574485-88574504 | Msa1223950:intron | 25.0% |
| !!! | CCCCTTTTTTTATACAATTT+GGG | + | chr8_1:88574489-88574508 | None:intergenic | 25.0% |
| ! | CCCAAATTGTATAAAAAAAG+GGG | - | chr8_1:88574486-88574505 | Msa1223950:intron | 25.0% |
| !!! | ACCCCTTTTTTTATACAATT+TGG | + | chr8_1:88574490-88574509 | None:intergenic | 25.0% |
| !!! | CAATGCAAAGTTTCTTTTTT+TGG | + | chr8_1:88574551-88574570 | None:intergenic | 25.0% |
| ! | CAAAAAAAGAAACTTTGCAT+TGG | - | chr8_1:88574549-88574568 | Msa1223950:intron | 25.0% |
| ! | AAATGTTAACTTATGTCCTA+AGG | + | chr8_1:88574658-88574677 | None:intergenic | 25.0% |
| ! | AAAATCACTCTGATTGAAAA+AGG | - | chr8_1:88574768-88574787 | Msa1223950:CDS | 25.0% |
| !!! | CAAAAATTTATAAAGCATCG+TGG | + | chr8_1:88574913-88574932 | None:intergenic | 25.0% |
| !! | CACGATGCTTTATAAATTTT+TGG | - | chr8_1:88574911-88574930 | Msa1223950:CDS | 25.0% |
| !! | TGTTTTCCTATAGTTATTGA+AGG | - | chr8_1:88575127-88575146 | Msa1223950:CDS | 25.0% |
| !!! | TGATTGTGTGTTTCTTTTTT+CGG | - | chr8_1:88575155-88575174 | Msa1223950:CDS | 25.0% |
| GAGAAGAAGAATGATTGTTA+AGG | + | chr8_1:88569739-88569758 | None:intergenic | 30.0% | |
| TAGAAAAAAGGAATTGGGTA+AGG | + | chr8_1:88569776-88569795 | None:intergenic | 30.0% | |
| ! | AAAAGGATTTGAGGTTGAAA+GGG | + | chr8_1:88569903-88569922 | None:intergenic | 30.0% |
| ! | AAAAAGGATTTGAGGTTGAA+AGG | + | chr8_1:88569904-88569923 | None:intergenic | 30.0% |
| GAAGAACATAGAAATTGTTG+AGG | + | chr8_1:88569930-88569949 | None:intergenic | 30.0% | |
| CATATGAAAAGGGACAATAA+AGG | + | chr8_1:88569958-88569977 | None:intergenic | 30.0% | |
| AATGAAACTTCCCAAAACAA+GGG | + | chr8_1:88570175-88570194 | None:intergenic | 30.0% | |
| TTGATATGAAATCGTTTGGT+CGG | - | chr8_1:88570369-88570388 | Msa1223950:intron | 30.0% | |
| ATTGAGTCGTAAGAAAATTG+TGG | + | chr8_1:88570527-88570546 | None:intergenic | 30.0% | |
| ! | GAATGACCAAATTGAGTTTT+TGG | - | chr8_1:88570667-88570686 | Msa1223950:intron | 30.0% |
| AATGATATATATTTCCGACC+GGG | - | chr8_1:88570834-88570853 | Msa1223950:intron | 30.0% | |
| GTGAATGATATGATGTTTGA+AGG | - | chr8_1:88570871-88570890 | Msa1223950:CDS | 30.0% | |
| AACCAATAAGTTTCAACACA+TGG | - | chr8_1:88571203-88571222 | Msa1223950:CDS | 30.0% | |
| AACCATGTGTTGAAACTTAT+TGG | + | chr8_1:88571208-88571227 | None:intergenic | 30.0% | |
| ATAAGAAAAACAATCGCTAC+CGG | + | chr8_1:88571244-88571263 | None:intergenic | 30.0% | |
| AAGTGTCCTTTACTCAAATA+AGG | + | chr8_1:88571328-88571347 | None:intergenic | 30.0% | |
| TTCCCATAATGTGAAAAAGA+AGG | + | chr8_1:88571404-88571423 | None:intergenic | 30.0% | |
| !! | TGAAATGGGTCAGTTATTTT+GGG | + | chr8_1:88571484-88571503 | None:intergenic | 30.0% |
| ! | TTGAAATGGGTCAGTTATTT+TGG | + | chr8_1:88571485-88571504 | None:intergenic | 30.0% |
| TGTATAAATAAAGGGGAAAG+TGG | + | chr8_1:88571896-88571915 | None:intergenic | 30.0% | |
| TTTGTGTGAAAAACCAAAGT+AGG | - | chr8_1:88571618-88571637 | Msa1223950:CDS | 30.0% | |
| GTAGATATGATGATTAGATG+TGG | - | chr8_1:88571760-88571779 | Msa1223950:intron | 30.0% | |
| TGTATAAATAAAGGGGAAAG+TGG | - | chr8_1:88571896-88571915 | Msa1223950:intron | 30.0% | |
| GTTATCTTTGTGATGAATAG+AGG | - | chr8_1:88572238-88572257 | Msa1223950:intron | 30.0% | |
| ATTAACCAAATCATATGGCA+GGG | + | chr8_1:88572727-88572746 | None:intergenic | 30.0% | |
| AATTAACCAAATCATATGGC+AGG | + | chr8_1:88572728-88572747 | None:intergenic | 30.0% | |
| GCACAATTAACCAAATCATA+TGG | + | chr8_1:88572732-88572751 | None:intergenic | 30.0% | |
| ATGCAGTTAGCAATTTCAAT+GGG | + | chr8_1:88572822-88572841 | None:intergenic | 30.0% | |
| !!! | TTCTGTAATTGGTTTTTTGC+AGG | - | chr8_1:88573144-88573163 | Msa1223950:intron | 30.0% |
| !!! | AAAATGGTGCTATCTGTTTT+TGG | - | chr8_1:88573186-88573205 | Msa1223950:intron | 30.0% |
| !!! | AAATGGTGCTATCTGTTTTT+GGG | - | chr8_1:88573187-88573206 | Msa1223950:intron | 30.0% |
| TCATATTATGGATGACAAGA+AGG | - | chr8_1:88573333-88573352 | Msa1223950:intron | 30.0% | |
| ACATGACACTAACATGATAT+TGG | + | chr8_1:88573528-88573547 | None:intergenic | 30.0% | |
| AATACCAAACAGAAAACAAG+AGG | - | chr8_1:88573659-88573678 | Msa1223950:CDS | 30.0% | |
| ATACCAAACAGAAAACAAGA+GGG | - | chr8_1:88573660-88573679 | Msa1223950:CDS | 30.0% | |
| ATGAATGCAAGAAATTACCT+TGG | - | chr8_1:88573703-88573722 | Msa1223950:CDS | 30.0% | |
| AGTAACAAAATTAGGTTCCA+AGG | + | chr8_1:88573723-88573742 | None:intergenic | 30.0% | |
| ! | TGGAACCTAATTTTGTTACT+TGG | - | chr8_1:88573723-88573742 | Msa1223950:CDS | 30.0% |
| TAGCTATATGGTATAGAAGT+GGG | + | chr8_1:88573926-88573945 | None:intergenic | 30.0% | |
| GCAAATAATTTACCTAGAGA+TGG | + | chr8_1:88574140-88574159 | None:intergenic | 30.0% | |
| ATTGTGTGTCTGAATTTCAT+TGG | - | chr8_1:88574431-88574450 | Msa1223950:intron | 30.0% | |
| CTTCTATAACTCACTTGTAA+GGG | + | chr8_1:88574464-88574483 | None:intergenic | 30.0% | |
| ACTTCTATAACTCACTTGTA+AGG | + | chr8_1:88574465-88574484 | None:intergenic | 30.0% | |
| !! | TCATATTAATTTGTGCCCTT+AGG | - | chr8_1:88574509-88574528 | Msa1223950:intron | 30.0% |
| !! | CATATTAATTTGTGCCCTTA+GGG | - | chr8_1:88574510-88574529 | Msa1223950:intron | 30.0% |
| !!! | GCTTTTGTTTTTGGAACAAA+TGG | - | chr8_1:88574822-88574841 | Msa1223950:CDS | 30.0% |
| AGAAATCAATTTGTCAACCA+CGG | + | chr8_1:88574876-88574895 | None:intergenic | 30.0% | |
| !!! | TTTTGGTTTTTGAGGTAAGA+AGG | + | chr8_1:88574970-88574989 | None:intergenic | 30.0% |
| TTACCTCAAAAACCAAAATG+TGG | - | chr8_1:88574972-88574991 | Msa1223950:CDS | 30.0% | |
| !!! | TATCCACATTTTGGTTTTTG+AGG | + | chr8_1:88574978-88574997 | None:intergenic | 30.0% |
| ! | TATATTGGGTATCCACATTT+TGG | + | chr8_1:88574987-88575006 | None:intergenic | 30.0% |
| ATGTAGATATTACTAGGCAA+AGG | - | chr8_1:88575008-88575027 | Msa1223950:CDS | 30.0% | |
| ACTCTTCCTTCAATAACTAT+AGG | + | chr8_1:88575136-88575155 | None:intergenic | 30.0% | |
| !!! | GATTGTGTGTTTCTTTTTTC+GGG | - | chr8_1:88575156-88575175 | Msa1223950:CDS | 30.0% |
| ACAAACCGTAAAACATAGAA+AGG | + | chr8_1:88575211-88575230 | None:intergenic | 30.0% | |
| TGATTGTTAAGGTTGAGTGT+TGG | + | chr8_1:88569728-88569747 | None:intergenic | 35.0% | |
| GAAATTGTTGAGGGTGAAAA+AGG | + | chr8_1:88569920-88569939 | None:intergenic | 35.0% | |
| ! | ATGTTACGGCTATTGTTGTT+GGG | + | chr8_1:88570003-88570022 | None:intergenic | 35.0% |
| CAATAACAGCAAGCATGTTA+CGG | + | chr8_1:88570017-88570036 | None:intergenic | 35.0% | |
| ! | TTATTGCTTGGGTTTTCAGT+TGG | - | chr8_1:88570031-88570050 | Msa1223950:three_prime_UTR | 35.0% |
| !!! | GATGTCATTACCCTTGTTTT+GGG | - | chr8_1:88570162-88570181 | Msa1223950:intron | 35.0% |
| GAATGAAACTTCCCAAAACA+AGG | + | chr8_1:88570176-88570195 | None:intergenic | 35.0% | |
| TATGAACATGAACAACACGA+TGG | - | chr8_1:88570326-88570345 | Msa1223950:intron | 35.0% | |
| TTAACCTCTCTATGGAGTAT+TGG | - | chr8_1:88570445-88570464 | Msa1223950:intron | 35.0% | |
| ATATCCAATACTCCATAGAG+AGG | + | chr8_1:88570452-88570471 | None:intergenic | 35.0% | |
| ! | TTTTTATCCATTGATCGTGG+AGG | - | chr8_1:88570696-88570715 | Msa1223950:intron | 35.0% |
| ! | TTTTATCCATTGATCGTGGA+GGG | - | chr8_1:88570697-88570716 | Msa1223950:intron | 35.0% |
| ATGATATATATTTCCGACCG+GGG | - | chr8_1:88570835-88570854 | Msa1223950:intron | 35.0% | |
| ! | AATCCAGCGCTATTGTTATT+GGG | - | chr8_1:88570923-88570942 | Msa1223950:CDS | 35.0% |
| !!! | AAACTTATTGGTTTTGCACC+AGG | + | chr8_1:88571196-88571215 | None:intergenic | 35.0% |
| !! | ATGGTTCTTCTTTGCTTTTC+CGG | - | chr8_1:88571222-88571241 | Msa1223950:CDS | 35.0% |
| TTCTCTGCTTGATTTACCTA+AGG | - | chr8_1:88571278-88571297 | Msa1223950:CDS | 35.0% | |
| TGCTTGATTTACCTAAGGAA+GGG | - | chr8_1:88571283-88571302 | Msa1223950:CDS | 35.0% | |
| ! | CTCTCTCCTTATTTGAGTAA+AGG | - | chr8_1:88571319-88571338 | Msa1223950:CDS | 35.0% |
| ATATGTCAGTTATTCCGAGA+CGG | + | chr8_1:88571444-88571463 | None:intergenic | 35.0% | |
| CCAAAGTAGGTCAATTATAC+CGG | - | chr8_1:88571631-88571650 | Msa1223950:CDS | 35.0% | |
| CAAAGTAGGTCAATTATACC+GGG | - | chr8_1:88571632-88571651 | Msa1223950:CDS | 35.0% | |
| GTCAAGGGGTCAAATAAATT+GGG | + | chr8_1:88571852-88571871 | None:intergenic | 35.0% | |
| AGTCAAGGGGTCAAATAAAT+TGG | + | chr8_1:88571853-88571872 | None:intergenic | 35.0% | |
| ATCTGTGTGAAATGAGTCAA+GGG | + | chr8_1:88571867-88571886 | None:intergenic | 35.0% | |
| AATCTGTGTGAAATGAGTCA+AGG | + | chr8_1:88571868-88571887 | None:intergenic | 35.0% | |
| ! | TTGAAATGGGTCGGTTATTT+TGG | - | chr8_1:88571999-88572018 | Msa1223950:intron | 35.0% |
| !! | TGAAATGGGTCGGTTATTTT+GGG | - | chr8_1:88572000-88572019 | Msa1223950:intron | 35.0% |
| AGAAAATGGGTCAGTTATTC+CGG | - | chr8_1:88572035-88572054 | Msa1223950:intron | 35.0% | |
| AGTTCATTTAGCATAGTGTC+CGG | - | chr8_1:88572693-88572712 | Msa1223950:intron | 35.0% | |
| CATGCAGTTAGCAATTTCAA+TGG | + | chr8_1:88572823-88572842 | None:intergenic | 35.0% | |
| ! | ATTTTCTCTGCGAAAGACAT+GGG | + | chr8_1:88573171-88573190 | None:intergenic | 35.0% |
| !!! | AATGGTGCTATCTGTTTTTG+GGG | - | chr8_1:88573188-88573207 | Msa1223950:intron | 35.0% |
| TGCAGTTGCTGATCATATTA+TGG | - | chr8_1:88573321-88573340 | Msa1223950:intron | 35.0% | |
| CAGCTCCAAGTAACAAAATT+AGG | + | chr8_1:88573731-88573750 | None:intergenic | 35.0% | |
| !! | CTAATTTTGTTACTTGGAGC+TGG | - | chr8_1:88573729-88573748 | Msa1223950:CDS | 35.0% |
| CTTAGAAGATGCTCCATATT+TGG | - | chr8_1:88573818-88573837 | Msa1223950:CDS | 35.0% | |
| CTACTTATAAGACTAACTGC+AGG | + | chr8_1:88573852-88573871 | None:intergenic | 35.0% | |
| CTAGCTATATGGTATAGAAG+TGG | + | chr8_1:88573927-88573946 | None:intergenic | 35.0% | |
| CACTTCTATACCATATAGCT+AGG | - | chr8_1:88573925-88573944 | Msa1223950:CDS | 35.0% | |
| GCAAAACCAACTACATTTGA+GGG | + | chr8_1:88574032-88574051 | None:intergenic | 35.0% | |
| AGCAAAACCAACTACATTTG+AGG | + | chr8_1:88574033-88574052 | None:intergenic | 35.0% | |
| !!! | AATGTAGTTGGTTTTGCTAC+TGG | - | chr8_1:88574035-88574054 | Msa1223950:CDS | 35.0% |
| ATTCAAGATACGCTCAAAGT+TGG | - | chr8_1:88574068-88574087 | Msa1223950:CDS | 35.0% | |
| ! | TCAGTTTTTATGCCATCTCT+AGG | - | chr8_1:88574125-88574144 | Msa1223950:intron | 35.0% |
| AAATTCAGACACACAATTGC+GGG | + | chr8_1:88574428-88574447 | None:intergenic | 35.0% | |
| GAAATTCAGACACACAATTG+CGG | + | chr8_1:88574429-88574448 | None:intergenic | 35.0% | |
| TTCTTTAACATGTGCCCTAA+GGG | + | chr8_1:88574527-88574546 | None:intergenic | 35.0% | |
| ATTCTTTAACATGTGCCCTA+AGG | + | chr8_1:88574528-88574547 | None:intergenic | 35.0% | |
| ! | GGATTCTGATGTCATACTTT+TGG | - | chr8_1:88574789-88574808 | Msa1223950:CDS | 35.0% |
| !! | AGATTTTGTTTGGCATCCAT+TGG | + | chr8_1:88574851-88574870 | None:intergenic | 35.0% |
| TAGATATTACTAGGCAAAGG+AGG | - | chr8_1:88575011-88575030 | Msa1223950:CDS | 35.0% | |
| !! | ACTGTGTTCTCCTGTCATTT+TGG | + | chr8_1:88569800-88569819 | None:intergenic | 40.0% |
| !! | GAGGTTGATGTTGGATTCAT+CGG | + | chr8_1:88569836-88569855 | None:intergenic | 40.0% |
| TTCTATGGAGTGGTAGAAGT+GGG | + | chr8_1:88569870-88569889 | None:intergenic | 40.0% | |
| TTGCTTTGTGTTCTATGGAG+TGG | + | chr8_1:88569880-88569899 | None:intergenic | 40.0% | |
| ! | AAGGGTTGCTTTGTGTTCTA+TGG | + | chr8_1:88569885-88569904 | None:intergenic | 40.0% |
| TGAGGGTGAAAAAGGATTTG+AGG | + | chr8_1:88569912-88569931 | None:intergenic | 40.0% | |
| CATGTTACGGCTATTGTTGT+TGG | + | chr8_1:88570004-88570023 | None:intergenic | 40.0% | |
| !! | ACATGCTTGCTGTTATTGCT+TGG | - | chr8_1:88570019-88570038 | Msa1223950:three_prime_UTR | 40.0% |
| !! | CATGCTTGCTGTTATTGCTT+GGG | - | chr8_1:88570020-88570039 | Msa1223950:three_prime_UTR | 40.0% |
| CACATAGAAGTAACAGGAAG+TGG | + | chr8_1:88570075-88570094 | None:intergenic | 40.0% | |
| AGAGGACACATAGAAGTAAC+AGG | + | chr8_1:88570081-88570100 | None:intergenic | 40.0% | |
| CAGAAGCAATTCCAAAGAGA+GGG | + | chr8_1:88570113-88570132 | None:intergenic | 40.0% | |
| TACCGTTGCTCATTCTTACA+TGG | - | chr8_1:88570137-88570156 | Msa1223950:CDS | 40.0% | |
| GTCCATGTAAGAATGAGCAA+CGG | + | chr8_1:88570142-88570161 | None:intergenic | 40.0% | |
| !! | CGATGTCATTACCCTTGTTT+TGG | - | chr8_1:88570161-88570180 | Msa1223950:intron | 40.0% |
| CTACAACGTTCACAGAAGAT+TGG | - | chr8_1:88570215-88570234 | Msa1223950:intron | 40.0% | |
| TCACAACCAATCATAAACCC+CGG | + | chr8_1:88570855-88570874 | None:intergenic | 40.0% | |
| ! | AACAATAGCGCTGGATTCAA+CGG | + | chr8_1:88570920-88570939 | None:intergenic | 40.0% |
| GAATCCAGCGCTATTGTTAT+TGG | - | chr8_1:88570922-88570941 | Msa1223950:CDS | 40.0% | |
| GGTGAATAAGTTCAGTAGAG+CGG | - | chr8_1:88571069-88571088 | Msa1223950:CDS | 40.0% | |
| ! | AAAGTACTCATCCCTCCAAT+TGG | + | chr8_1:88571121-88571140 | None:intergenic | 40.0% |
| CTGCTTGATTTACCTAAGGA+AGG | - | chr8_1:88571282-88571301 | Msa1223950:CDS | 40.0% | |
| TGAGTAAAGGACACTTGAAG+AGG | - | chr8_1:88571332-88571351 | Msa1223950:CDS | 40.0% | |
| GAGTAAAGGACACTTGAAGA+GGG | - | chr8_1:88571333-88571352 | Msa1223950:CDS | 40.0% | |
| AAGAGGGAATTAGAAGCTCT+AGG | - | chr8_1:88571349-88571368 | Msa1223950:intron | 40.0% | |
| CCGGTATAATTGACCTACTT+TGG | + | chr8_1:88571634-88571653 | None:intergenic | 40.0% | |
| GTCAAATAAATTGGGACGGA+GGG | + | chr8_1:88571844-88571863 | None:intergenic | 40.0% | |
| AGGGGTCAAATAAATTGGGA+CGG | + | chr8_1:88571848-88571867 | None:intergenic | 40.0% | |
| TCTGTGTGAAATGAGTCAAG+GGG | + | chr8_1:88571866-88571885 | None:intergenic | 40.0% | |
| GAAAATGGGTCAGTTATTCC+GGG | - | chr8_1:88572036-88572055 | Msa1223950:intron | 40.0% | |
| TAACGACACGTAAGTAGACA+GGG | + | chr8_1:88572222-88572241 | None:intergenic | 40.0% | |
| ATAACGACACGTAAGTAGAC+AGG | + | chr8_1:88572223-88572242 | None:intergenic | 40.0% | |
| ATTTATTGCCACATGGCTCA+TGG | - | chr8_1:88572284-88572303 | Msa1223950:intron | 40.0% | |
| GATATTATCCATGAGCCATG+TGG | + | chr8_1:88572295-88572314 | None:intergenic | 40.0% | |
| ATGACACATCCACATTGGAA+TGG | + | chr8_1:88572325-88572344 | None:intergenic | 40.0% | |
| TCTGTCTCACTTTCAACCAA+TGG | - | chr8_1:88572344-88572363 | Msa1223950:intron | 40.0% | |
| CACTTTCAACCAATGGTACT+TGG | - | chr8_1:88572351-88572370 | Msa1223950:intron | 40.0% | |
| AATCATATGGCAGGGATAAC+AGG | + | chr8_1:88572719-88572738 | None:intergenic | 40.0% | |
| GTTATCCCTGCCATATGATT+TGG | - | chr8_1:88572719-88572738 | Msa1223950:intron | 40.0% | |
| TGTACCAGACTTGTGTGAAA+TGG | - | chr8_1:88572791-88572810 | Msa1223950:intron | 40.0% | |
| CAATCCATTTCACACAAGTC+TGG | + | chr8_1:88572798-88572817 | None:intergenic | 40.0% | |
| ! | CATTTTCTCTGCGAAAGACA+TGG | + | chr8_1:88573172-88573191 | None:intergenic | 40.0% |
| CATGTCTTTCGCAGAGAAAA+TGG | - | chr8_1:88573170-88573189 | Msa1223950:intron | 40.0% | |
| ATGGAAAAAAGTTCCCCATC+CGG | + | chr8_1:88573375-88573394 | None:intergenic | 40.0% | |
| !!! | ACTTTTTTCCATGGCCTTGT+TGG | - | chr8_1:88573383-88573402 | Msa1223950:intron | 40.0% |
| !!! | TCACCCTCTTGTTTTCTGTT+TGG | + | chr8_1:88573666-88573685 | None:intergenic | 40.0% |
| TGGGATAATAAGTGTAGCAG+TGG | + | chr8_1:88573907-88573926 | None:intergenic | 40.0% | |
| CATGCATAGTCCTAGCTATA+TGG | + | chr8_1:88573938-88573957 | None:intergenic | 40.0% | |
| ATTCAGTTGCAATTGCTCCT+GGG | + | chr8_1:88573983-88574002 | None:intergenic | 40.0% | |
| AATTCAGTTGCAATTGCTCC+TGG | + | chr8_1:88573984-88574003 | None:intergenic | 40.0% | |
| TCAACTCCCTCAAATGTAGT+TGG | - | chr8_1:88574023-88574042 | Msa1223950:CDS | 40.0% | |
| TGGCATAAAAACTGAGAGCA+CGG | + | chr8_1:88574120-88574139 | None:intergenic | 40.0% | |
| TTAACAAAGTGGCGTTCGTA+AGG | - | chr8_1:88574307-88574326 | Msa1223950:intron | 40.0% | |
| GTTCCTTAACATGTGTCCTT+AGG | - | chr8_1:88574639-88574658 | Msa1223950:intron | 40.0% | |
| TGTCCTAAGGACACATGTTA+AGG | + | chr8_1:88574645-88574664 | None:intergenic | 40.0% | |
| !!! | TGTCATACTTTTGGTGTTGC+AGG | - | chr8_1:88574798-88574817 | Msa1223950:CDS | 40.0% |
| !!! | GTTGCAGGTGCTTTTGTTTT+TGG | - | chr8_1:88574813-88574832 | Msa1223950:CDS | 40.0% |
| TTGGAACAAATGGTGTCCAA+TGG | - | chr8_1:88574832-88574851 | Msa1223950:CDS | 40.0% | |
| ! | AACCACGGAGAGATTTTGTT+TGG | + | chr8_1:88574861-88574880 | None:intergenic | 40.0% |
| !!! | GGTTTTTGAGGTAAGAAGGA+AGG | + | chr8_1:88574966-88574985 | None:intergenic | 40.0% |
| ATATTACTAGGCAAAGGAGG+AGG | - | chr8_1:88575014-88575033 | Msa1223950:CDS | 40.0% | |
| TATTACTAGGCAAAGGAGGA+GGG | - | chr8_1:88575015-88575034 | Msa1223950:CDS | 40.0% | |
| CCGTAAAACATAGAAAGGCA+CGG | + | chr8_1:88575206-88575225 | None:intergenic | 40.0% | |
| ! | CCGTGCCTTTCTATGTTTTA+CGG | - | chr8_1:88575203-88575222 | Msa1223950:five_prime_UTR | 40.0% |
| !! | CTTCAGGTTGAGGTTGATGT+TGG | + | chr8_1:88569845-88569864 | None:intergenic | 45.0% |
| CAACATCAACCTCAACCTGA+AGG | - | chr8_1:88569843-88569862 | Msa1223950:three_prime_UTR | 45.0% | |
| TCTATGGAGTGGTAGAAGTG+GGG | + | chr8_1:88569869-88569888 | None:intergenic | 45.0% | |
| GTTCTATGGAGTGGTAGAAG+TGG | + | chr8_1:88569871-88569890 | None:intergenic | 45.0% | |
| ! | TTGCTTGGGTTTTCAGTTGG+TGG | - | chr8_1:88570034-88570053 | Msa1223950:three_prime_UTR | 45.0% |
| ! | TGCTTGGGTTTTCAGTTGGT+GGG | - | chr8_1:88570035-88570054 | Msa1223950:three_prime_UTR | 45.0% |
| AACAGGAAGTGGTAAAGCAG+AGG | + | chr8_1:88570064-88570083 | None:intergenic | 45.0% | |
| AAGAGAGGGAACAGAAACAG+AGG | + | chr8_1:88570099-88570118 | None:intergenic | 45.0% | |
| !! | CTGTTTCTGTTCCCTCTCTT+TGG | - | chr8_1:88570099-88570118 | Msa1223950:exon | 45.0% |
| GCAGAAGCAATTCCAAAGAG+AGG | + | chr8_1:88570114-88570133 | None:intergenic | 45.0% | |
| GTGAACGTTGTAGCGTTCAA+CGG | + | chr8_1:88570208-88570227 | None:intergenic | 45.0% | |
| AACCAATCATAAACCCCGGT+CGG | + | chr8_1:88570851-88570870 | None:intergenic | 45.0% | |
| AAGGTGACATCAGTGTTCTG+TGG | - | chr8_1:88570890-88570909 | Msa1223950:CDS | 45.0% | |
| AGGTGACATCAGTGTTCTGT+GGG | - | chr8_1:88570891-88570910 | Msa1223950:CDS | 45.0% | |
| AGACCCAATAACAATAGCGC+TGG | + | chr8_1:88570929-88570948 | None:intergenic | 45.0% | |
| CATGCTCACAAAGAATGACG+TGG | + | chr8_1:88570957-88570976 | None:intergenic | 45.0% | |
| CGTCATTCTTTGTGAGCATG+TGG | - | chr8_1:88570957-88570976 | Msa1223950:CDS | 45.0% | |
| GAATAAGTTCAGTAGAGCGG+TGG | - | chr8_1:88571072-88571091 | Msa1223950:CDS | 45.0% | |
| TTTATGCCGTGCCAATTGGA+GGG | - | chr8_1:88571107-88571126 | Msa1223950:CDS | 45.0% | |
| GAGGGATGAGTACTTTGACA+GGG | - | chr8_1:88571125-88571144 | Msa1223950:CDS | 45.0% | |
| ATGAGTACTTTGACAGGGAC+AGG | - | chr8_1:88571130-88571149 | Msa1223950:CDS | 45.0% | |
| !! | ATGTGGAAGAGTCTTGTTCC+TGG | - | chr8_1:88571175-88571194 | Msa1223950:CDS | 45.0% |
| TTCTATTACTCCCTCCGTCT+CGG | - | chr8_1:88571427-88571446 | Msa1223950:intron | 45.0% | |
| GTAGGTCAATTATACCGGGA+CGG | - | chr8_1:88571636-88571655 | Msa1223950:CDS | 45.0% | |
| GGTCAAATAAATTGGGACGG+AGG | + | chr8_1:88571845-88571864 | None:intergenic | 45.0% | |
| GGCTCATGGATAATATCAGC+TGG | - | chr8_1:88572298-88572317 | Msa1223950:intron | 45.0% | |
| GACAGATGACACATCCACAT+TGG | + | chr8_1:88572330-88572349 | None:intergenic | 45.0% | |
| TTCGTAGGTCCAAGTACCAT+TGG | + | chr8_1:88572363-88572382 | None:intergenic | 45.0% | |
| !! | ATGGGGTCTATTGGTTTCGT+AGG | + | chr8_1:88572378-88572397 | None:intergenic | 45.0% |
| TGGGAACAAATGGGGTCTAT+TGG | + | chr8_1:88572387-88572406 | None:intergenic | 45.0% | |
| AGGATCACAGATGACATTCC+CGG | - | chr8_1:88573353-88573372 | Msa1223950:intron | 45.0% | |
| TGGAAAAAAGTTCCCCATCC+GGG | + | chr8_1:88573374-88573393 | None:intergenic | 45.0% | |
| !!! | GGATGGGGAACTTTTTTCCA+TGG | - | chr8_1:88573374-88573393 | Msa1223950:intron | 45.0% |
| TGACACTTCCATCACCAACA+AGG | + | chr8_1:88573400-88573419 | None:intergenic | 45.0% | |
| ACAAGAGGGTGAGAAGCTAA+TGG | - | chr8_1:88573674-88573693 | Msa1223950:CDS | 45.0% | |
| ! | AGGGTGAGAAGCTAATGGAT+TGG | - | chr8_1:88573679-88573698 | Msa1223950:CDS | 45.0% |
| !!! | GCTGGTTTTGCTTTAGCTGA+TGG | - | chr8_1:88573747-88573766 | Msa1223950:CDS | 45.0% |
| GCTGATGGAGTTCAATCTAG+TGG | - | chr8_1:88573762-88573781 | Msa1223950:CDS | 45.0% | |
| GCAGGAGCAATTGCCAAATA+TGG | + | chr8_1:88573834-88573853 | None:intergenic | 45.0% | |
| CCTGGGATCATAAGAAGAAG+AGG | + | chr8_1:88573966-88573985 | None:intergenic | 45.0% | |
| CCTCTTCTTCTTATGATCCC+AGG | - | chr8_1:88573963-88573982 | Msa1223950:CDS | 45.0% | |
| ACATTTGAGGGAGTTGACGT+AGG | + | chr8_1:88574020-88574039 | None:intergenic | 45.0% | |
| ! | CAAAGTTGGTCTGCCACTTA+AGG | - | chr8_1:88574082-88574101 | Msa1223950:CDS | 45.0% |
| TGCCAAACAAAATCTCTCCG+TGG | - | chr8_1:88574856-88574875 | Msa1223950:CDS | 45.0% | |
| ATTACTAGGCAAAGGAGGAG+GGG | - | chr8_1:88575016-88575035 | Msa1223950:CDS | 45.0% | |
| !!! | CAATAATTTAAATTTAAAAT+GGG | + | chr8_1:88572406-88572425 | None:intergenic | 5.0% |
| !! | TCAATAATTTAAATTTAAAA+TGG | + | chr8_1:88572407-88572426 | None:intergenic | 5.0% |
| !! | ACTTTAAATTAAAAATTTAA+GGG | + | chr8_1:88574180-88574199 | None:intergenic | 5.0% |
| !! | AACTTTAAATTAAAAATTTA+AGG | + | chr8_1:88574181-88574200 | None:intergenic | 5.0% |
| CCTAATCCCTCCACGATCAA+TGG | + | chr8_1:88570706-88570725 | None:intergenic | 50.0% | |
| CCATTGATCGTGGAGGGATT+AGG | - | chr8_1:88570703-88570722 | Msa1223950:intron | 50.0% | |
| TTCCGACCGGGGTTTATGAT+TGG | - | chr8_1:88570846-88570865 | Msa1223950:intron | 50.0% | |
| GGTGACATCAGTGTTCTGTG+GGG | - | chr8_1:88570892-88570911 | Msa1223950:CDS | 50.0% | |
| !! | CAGTAGAGCGGTGGTTCTAA+CGG | - | chr8_1:88571081-88571100 | Msa1223950:CDS | 50.0% |
| GTGGTTTATGCCGTGCCAAT+TGG | - | chr8_1:88571103-88571122 | Msa1223950:CDS | 50.0% | |
| GTTTATGCCGTGCCAATTGG+AGG | - | chr8_1:88571106-88571125 | Msa1223950:CDS | 50.0% | |
| ACTCATCCCTCCAATTGGCA+CGG | + | chr8_1:88571116-88571135 | None:intergenic | 50.0% | |
| GGAGGGATGAGTACTTTGAC+AGG | - | chr8_1:88571124-88571143 | Msa1223950:CDS | 50.0% | |
| GTCAGTTATTCCGAGACGGA+GGG | + | chr8_1:88571440-88571459 | None:intergenic | 50.0% | |
| TGTCAGTTATTCCGAGACGG+AGG | + | chr8_1:88571441-88571460 | None:intergenic | 50.0% | |
| AGATAGTACTACCTCCGTCC+CGG | + | chr8_1:88571653-88571672 | None:intergenic | 50.0% | |
| ATGGGTCAGTTATTCCGGGA+CGG | - | chr8_1:88572040-88572059 | Msa1223950:intron | 50.0% | |
| AATTGATACTCCCTCCGTCC+CGG | + | chr8_1:88572057-88572076 | None:intergenic | 50.0% | |
| TCAGCTGGTCCATTCCAATG+TGG | - | chr8_1:88572313-88572332 | Msa1223950:intron | 50.0% | |
| ATATGGCAGGGATAACAGGC+CGG | + | chr8_1:88572715-88572734 | None:intergenic | 50.0% | |
| TCACAGATGACATTCCCGGA+TGG | - | chr8_1:88573357-88573376 | Msa1223950:intron | 50.0% | |
| CACAGATGACATTCCCGGAT+GGG | - | chr8_1:88573358-88573377 | Msa1223950:intron | 50.0% | |
| ACAGATGACATTCCCGGATG+GGG | - | chr8_1:88573359-88573378 | Msa1223950:intron | 50.0% | |
| !! | TTCCATGGCCTTGTTGGTGA+TGG | - | chr8_1:88573389-88573408 | Msa1223950:intron | 50.0% |
| TTCCATCACCAACAAGGCCA+TGG | + | chr8_1:88573394-88573413 | None:intergenic | 50.0% | |
| GTCCAGATTGAAGTCGTGTC+TGG | - | chr8_1:88573445-88573464 | Msa1223950:intron | 50.0% | |
| CACCAGACACGACTTCAATC+TGG | + | chr8_1:88573450-88573469 | None:intergenic | 50.0% | |
| ! | GTCTGCCACTTAAGGTTGCT+GGG | - | chr8_1:88574090-88574109 | Msa1223950:intron | 50.0% |
| GCTATCCCAGCAACCTTAAG+TGG | + | chr8_1:88574098-88574117 | None:intergenic | 50.0% | |
| TTACTAGGCAAAGGAGGAGG+GGG | - | chr8_1:88575017-88575036 | Msa1223950:CDS | 50.0% | |
| GAGCATGTGGATGCACAACG+TGG | - | chr8_1:88570970-88570989 | Msa1223950:CDS | 55.0% | |
| AGCTGCCGTGATGTTGATGC+CGG | - | chr8_1:88570994-88571013 | Msa1223950:CDS | 55.0% | |
| ACCAACTCCGATTGCTCCGA+CGG | + | chr8_1:88571052-88571071 | None:intergenic | 55.0% | |
| !! | TAGAGCGGTGGTTCTAACGG+TGG | - | chr8_1:88571084-88571103 | Msa1223950:CDS | 55.0% |
| ACCTAAGGAAGGGCTCAGCT+AGG | - | chr8_1:88571293-88571312 | Msa1223950:CDS | 55.0% | |
| CCTAAGGAAGGGCTCAGCTA+GGG | - | chr8_1:88571294-88571313 | Msa1223950:CDS | 55.0% | |
| GGTCAATTATACCGGGACGG+AGG | - | chr8_1:88571639-88571658 | Msa1223950:CDS | 55.0% | |
| GTCAGTTATTCCGGGACGGA+GGG | - | chr8_1:88572044-88572063 | Msa1223950:intron | 55.0% | |
| ! | GGTCTGCCACTTAAGGTTGC+TGG | - | chr8_1:88574089-88574108 | Msa1223950:intron | 55.0% |
| !! | GAAGTGGGGCCTTCAGGTTG+AGG | + | chr8_1:88569855-88569874 | None:intergenic | 60.0% |
| GTGGTAGAAGTGGGGCCTTC+AGG | + | chr8_1:88569861-88569880 | None:intergenic | 60.0% | |
| TGCCGTGATGTTGATGCCGG+TGG | - | chr8_1:88570997-88571016 | Msa1223950:CDS | 60.0% | |
| GGCCACCGGCATCAACATCA+CGG | + | chr8_1:88571002-88571021 | None:intergenic | 60.0% | |
| ATGTTGATGCCGGTGGCCAC+AGG | - | chr8_1:88571004-88571023 | Msa1223950:CDS | 60.0% | |
| TGTTGATGCCGGTGGCCACA+GGG | - | chr8_1:88571005-88571024 | Msa1223950:CDS | 60.0% | |
| TGTAACAGCCCTGTGGCCAC+CGG | + | chr8_1:88571016-88571035 | None:intergenic | 60.0% | |
| TGGCCACAGGGCTGTTACAG+CGG | - | chr8_1:88571017-88571036 | Msa1223950:CDS | 60.0% | |
| AACTCCGATTGCTCCGACGG+TGG | + | chr8_1:88571049-88571068 | None:intergenic | 60.0% | |
| ACCGTCGGAGCAATCGGAGT+TGG | - | chr8_1:88571048-88571067 | Msa1223950:CDS | 60.0% | |
| CCCTAGCTGAGCCCTTCCTT+AGG | + | chr8_1:88571297-88571316 | None:intergenic | 60.0% | |
| GGTCAGTTATTCCGGGACGG+AGG | - | chr8_1:88572043-88572062 | Msa1223950:intron | 60.0% | |
| CAGCCGCTGTAACAGCCCTG+TGG | + | chr8_1:88571023-88571042 | None:intergenic | 65.0% | |
| GCCACCACCGTCGGAGCAAT+CGG | - | chr8_1:88571042-88571061 | Msa1223950:CDS | 65.0% | |
| TCCGATTGCTCCGACGGTGG+TGG | + | chr8_1:88571046-88571065 | None:intergenic | 65.0% | |
| ACAGCGGCTGCCACCACCGT+CGG | - | chr8_1:88571033-88571052 | Msa1223950:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 88569719 | 88575279 | 88569719 | ID=Msa1223950;Name=Msa1223950 |
| chr8_1 | mRNA | 88569719 | 88575279 | 88569719 | ID=Msa1223950-mRNA-1;Parent=Msa1223950;Name=Msa1223950-mRNA-1;_AED=0.09;_eAED=0.09;_QI=83|1|1|1|1|1|6|389|548 |
| chr8_1 | exon | 88569719 | 88570178 | 88569719 | ID=Msa1223950-mRNA-1:exon:32167;Parent=Msa1223950-mRNA-1 |
| chr8_1 | exon | 88570852 | 88571365 | 88570852 | ID=Msa1223950-mRNA-1:exon:32166;Parent=Msa1223950-mRNA-1 |
| chr8_1 | exon | 88571577 | 88571672 | 88571577 | ID=Msa1223950-mRNA-1:exon:32165;Parent=Msa1223950-mRNA-1 |
| chr8_1 | exon | 88571789 | 88571832 | 88571789 | ID=Msa1223950-mRNA-1:exon:32164;Parent=Msa1223950-mRNA-1 |
| chr8_1 | exon | 88573628 | 88574105 | 88573628 | ID=Msa1223950-mRNA-1:exon:32163;Parent=Msa1223950-mRNA-1 |
| chr8_1 | exon | 88574753 | 88575279 | 88574753 | ID=Msa1223950-mRNA-1:exon:32162;Parent=Msa1223950-mRNA-1 |
| chr8_1 | five_prime_UTR | 88575197 | 88575279 | 88575197 | ID=Msa1223950-mRNA-1:five_prime_utr;Parent=Msa1223950-mRNA-1 |
| chr8_1 | CDS | 88574753 | 88575196 | 88574753 | ID=Msa1223950-mRNA-1:cds;Parent=Msa1223950-mRNA-1 |
| chr8_1 | CDS | 88573628 | 88574105 | 88573628 | ID=Msa1223950-mRNA-1:cds;Parent=Msa1223950-mRNA-1 |
| chr8_1 | CDS | 88571789 | 88571832 | 88571789 | ID=Msa1223950-mRNA-1:cds;Parent=Msa1223950-mRNA-1 |
| chr8_1 | CDS | 88571577 | 88571672 | 88571577 | ID=Msa1223950-mRNA-1:cds;Parent=Msa1223950-mRNA-1 |
| chr8_1 | CDS | 88570852 | 88571365 | 88570852 | ID=Msa1223950-mRNA-1:cds;Parent=Msa1223950-mRNA-1 |
| chr8_1 | CDS | 88570108 | 88570178 | 88570108 | ID=Msa1223950-mRNA-1:cds;Parent=Msa1223950-mRNA-1 |
| chr8_1 | three_prime_UTR | 88569719 | 88570107 | 88569719 | ID=Msa1223950-mRNA-1:three_prime_utr;Parent=Msa1223950-mRNA-1 |
| Gene Sequence |
| Protein sequence |
