Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1302530 | XP_003610532.1 | 92.395 | 526 | 8 | 1 | 1 | 494 | 1 | 526 | 0.0 | 957 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1302530 | sp|Q8LG88|TDT_ARATH | 60.037 | 538 | 163 | 7 | 1 | 494 | 1 | 530 | 0.0 | 629 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1302530 | G7JLM6 | 92.395 | 526 | 8 | 1 | 1 | 494 | 1 | 526 | 0.0 | 957 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0746040 | Msa1302530 | 0.931984 | 1.678588e-94 | -8.615850e-47 |
| Msa1263200 | Msa1302530 | 0.952413 | 2.557884e-110 | -8.615850e-47 |
| Msa1223950 | Msa1302530 | 0.966765 | 2.321658e-126 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1302530 | MtrunA17_Chr4g0075801 | 92.395 | 526 | 8 | 1 | 1 | 494 | 1 | 526 | 0.0 | 957 |
| Msa1302530 | MtrunA17_Chr2g0290091 | 73.786 | 515 | 97 | 4 | 19 | 496 | 6 | 519 | 0.0 | 758 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1302530 | AT5G47560.1 | 60.037 | 538 | 163 | 7 | 1 | 494 | 1 | 530 | 0.0 | 629 |
Find 124 sgRNAs with CRISPR-Local
Find 320 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACCATGTGTTGAAACTTAT+TGG | 0.130022 | 8_3:-65102492 | None:intergenic |
| CTGTTTCTGTTCCCTCTCTT+TGG | 0.149243 | 8_3:+65101386 | Msa1302530:CDS |
| AACAATTTCTATGTTCTTCT+TGG | 0.178098 | 8_3:+65101218 | Msa1302530:CDS |
| CTTAGAAGATGCTCCATATT+TGG | 0.182122 | 8_3:+65105084 | Msa1302530:CDS |
| GAAATTGTTGAGGGTGAAAA+AGG | 0.235232 | 8_3:-65101204 | None:intergenic |
| CGATGTCATTACCCTTGTTT+TGG | 0.238022 | 8_3:+65101448 | Msa1302530:CDS |
| ACTGTGTTCTCCTGTCATTT+TGG | 0.263152 | 8_3:-65101084 | None:intergenic |
| CAGCTCCAAGTAACAAAATT+AGG | 0.271062 | 8_3:-65104994 | None:intergenic |
| AAGTGTCCTTTACTCAAATA+AGG | 0.271792 | 8_3:-65102612 | None:intergenic |
| GTGGTAGAAGTGGGGCCTTC+AGG | 0.287054 | 8_3:-65101145 | None:intergenic |
| GAATCCAGCGCTATTGTTAT+TGG | 0.299822 | 8_3:+65102209 | Msa1302530:CDS |
| GGTCTGCCACTTAAGGTTGC+TGG | 0.310572 | 8_3:+65105355 | Msa1302530:CDS |
| AAGGGTTGCTTTGTGTTCTA+TGG | 0.316415 | 8_3:-65101169 | None:intergenic |
| GCAGGAGCAATTGCCAAATA+TGG | 0.317007 | 8_3:-65105097 | None:intergenic |
| GGTGTAAATTTGATATTGAT+TGG | 0.317954 | 8_3:+65102438 | Msa1302530:CDS |
| AATCCAGCGCTATTGTTATT+GGG | 0.344059 | 8_3:+65102210 | Msa1302530:CDS |
| CAAAGTTGGTCTGCCACTTA+AGG | 0.364039 | 8_3:+65105348 | Msa1302530:CDS |
| CATGCTTGCTGTTATTGCTT+GGG | 0.364876 | 8_3:+65101307 | Msa1302530:CDS |
| CATGTTACGGCTATTGTTGT+TGG | 0.404683 | 8_3:-65101288 | None:intergenic |
| GTCTGCCACTTAAGGTTGCT+GGG | 0.407479 | 8_3:+65105356 | Msa1302530:CDS |
| ATGTTGATGCCGGTGGCCAC+AGG | 0.409144 | 8_3:+65102291 | Msa1302530:CDS |
| AGAGGACACATAGAAGTAAC+AGG | 0.416408 | 8_3:-65101365 | None:intergenic |
| GAGAAGAAGAATGATTGTTA+AGG | 0.419127 | 8_3:-65101023 | None:intergenic |
| GTGGTTTATGCCGTGCCAAT+TGG | 0.419394 | 8_3:+65102390 | Msa1302530:CDS |
| GCCACCACCGTCGGAGCAAT+CGG | 0.421873 | 8_3:+65102329 | Msa1302530:CDS |
| CATGTCTTTCGCAGAGAAAA+TGG | 0.422210 | 8_3:+65104477 | Msa1302530:CDS |
| ACATGCTTGCTGTTATTGCT+TGG | 0.432445 | 8_3:+65101306 | Msa1302530:CDS |
| TAACAAAGAGACATATGAAA+AGG | 0.437864 | 8_3:-65101253 | None:intergenic |
| CTTCAGGTTGAGGTTGATGT+TGG | 0.451414 | 8_3:-65101129 | None:intergenic |
| CTCTCTCCTTATTTGAGTAA+AGG | 0.456416 | 8_3:+65102606 | Msa1302530:CDS |
| ATGTTACGGCTATTGTTGTT+GGG | 0.457105 | 8_3:-65101287 | None:intergenic |
| ATGTGGAAGAGTCTTGTTCC+TGG | 0.468609 | 8_3:+65102462 | Msa1302530:CDS |
| GAAGTGGGGCCTTCAGGTTG+AGG | 0.470925 | 8_3:-65101139 | None:intergenic |
| AAAAGGATTTGAGGTTGAAA+GGG | 0.471214 | 8_3:-65101187 | None:intergenic |
| GTTTATGCCGTGCCAATTGG+AGG | 0.471732 | 8_3:+65102393 | Msa1302530:CDS |
| TACCGTTGCTCATTCTTACA+TGG | 0.479194 | 8_3:+65101424 | Msa1302530:CDS |
| ACAAGAGGGTGAGAAGCTAA+TGG | 0.479870 | 8_3:+65104940 | Msa1302530:CDS |
| CTGCTTGATTTACCTAAGGA+AGG | 0.481460 | 8_3:+65102569 | Msa1302530:CDS |
| GCAAATAATTTACCTAGAGA+TGG | 0.484625 | 8_3:-65105403 | None:intergenic |
| AAAGTACTCATCCCTCCAAT+TGG | 0.484679 | 8_3:-65102405 | None:intergenic |
| TCCGATTGCTCCGACGGTGG+TGG | 0.485794 | 8_3:-65102330 | None:intergenic |
| AATTCAGTAGCAATTGCTCC+TGG | 0.490731 | 8_3:-65105247 | None:intergenic |
| GCAAAAGCAACTACATTTGA+GGG | 0.492457 | 8_3:-65105295 | None:intergenic |
| CAATAACAGCAAGCATGTTA+CGG | 0.494684 | 8_3:-65101301 | None:intergenic |
| TTCTCTGCTTGATTTACCTA+AGG | 0.497551 | 8_3:+65102565 | Msa1302530:CDS |
| AACTCCGATTGCTCCGACGG+TGG | 0.499273 | 8_3:-65102333 | None:intergenic |
| AGCAAAAGCAACTACATTTG+AGG | 0.499523 | 8_3:-65105296 | None:intergenic |
| GAGGTTGATGTTGGATTCAT+CGG | 0.508040 | 8_3:-65101120 | None:intergenic |
| CACATAGAAGTAACAGGAAG+TGG | 0.512441 | 8_3:-65101359 | None:intergenic |
| ATTCAAGATACGCTCAAAGT+TGG | 0.514187 | 8_3:+65105334 | Msa1302530:CDS |
| AACAAAGAGACATATGAAAA+GGG | 0.515332 | 8_3:-65101252 | None:intergenic |
| CTACAACGTTCACAGAAGAT+TGG | 0.516743 | 8_3:+65101502 | Msa1302530:CDS |
| ACCAACTCCGATTGCTCCGA+CGG | 0.521741 | 8_3:-65102336 | None:intergenic |
| TGTAACAGCCCTGTGGCCAC+CGG | 0.524138 | 8_3:-65102300 | None:intergenic |
| GGAGGGATGAGTACTTTGAC+AGG | 0.524697 | 8_3:+65102411 | Msa1302530:CDS |
| GCTATCCCAGCAACCTTAAG+TGG | 0.526924 | 8_3:-65105361 | None:intergenic |
| CCTCTTCTTCTTATGATCCC+AGG | 0.527608 | 8_3:+65105229 | Msa1302530:CDS |
| AACAATAGCGCTGGATTCAA+CGG | 0.528207 | 8_3:-65102204 | None:intergenic |
| AGTAACAAAATTAGGTTCCA+AGG | 0.528587 | 8_3:-65104986 | None:intergenic |
| CCCTAGCTGAGCCCTTCCTT+AGG | 0.531630 | 8_3:-65102581 | None:intergenic |
| ATGAGTACTTTGACAGGGAC+AGG | 0.531696 | 8_3:+65102417 | Msa1302530:CDS |
| TTCTATGGAGTGGTAGAAGT+GGG | 0.531994 | 8_3:-65101154 | None:intergenic |
| ACCTAAGGAAGGGCTCAGCT+AGG | 0.534237 | 8_3:+65102580 | Msa1302530:CDS |
| AGCTGCCGTGATGTTGATGC+CGG | 0.539745 | 8_3:+65102281 | Msa1302530:CDS |
| TGGCCACAGGGCTGTTACAG+CGG | 0.542397 | 8_3:+65102304 | Msa1302530:CDS |
| AGGGTGAGAAGCTAATGGAT+TGG | 0.543793 | 8_3:+65104945 | Msa1302530:CDS |
| CAGTAGAGCGGTGGTTCTAA+CGG | 0.547575 | 8_3:+65102368 | Msa1302530:CDS |
| AAGAACATAGAAATTGTTGA+GGG | 0.551725 | 8_3:-65101213 | None:intergenic |
| GAATGAAACTTCCCAAAACA+AGG | 0.552593 | 8_3:-65101460 | None:intergenic |
| ATGAATGCAAGAAATTACCT+TGG | 0.560679 | 8_3:+65104969 | Msa1302530:CDS |
| TGTTGATGCCGGTGGCCACA+GGG | 0.561507 | 8_3:+65102292 | Msa1302530:CDS |
| AGACCCAATAACAATAGCGC+TGG | 0.562343 | 8_3:-65102213 | None:intergenic |
| AATATTAAAACTTACGGTCA+AGG | 0.563166 | 8_3:-65101525 | None:intergenic |
| TGCTTGATTTACCTAAGGAA+GGG | 0.566581 | 8_3:+65102570 | Msa1302530:CDS |
| ATTTGATATTGATTGGAATG+TGG | 0.568501 | 8_3:+65102445 | Msa1302530:CDS |
| CAAAAGCAACTACATTTGAG+GGG | 0.572652 | 8_3:-65105294 | None:intergenic |
| CATATGAAAAGGGACAATAA+AGG | 0.573040 | 8_3:-65101242 | None:intergenic |
| AAGAGGGAATTAGAAGCTCT+AGG | 0.573141 | 8_3:+65102636 | Msa1302530:CDS |
| CGTCATTCTTTGTGAGCATG+TGG | 0.577614 | 8_3:+65102244 | Msa1302530:CDS |
| GTGAACGTTGTAGCGTTCAA+CGG | 0.578386 | 8_3:-65101492 | None:intergenic |
| GCTGATGGAGTTCAATCTAG+TGG | 0.579028 | 8_3:+65105028 | Msa1302530:CDS |
| AGGTGACATCAGTGTTCTGT+GGG | 0.581688 | 8_3:+65102178 | Msa1302530:intron |
| CCTAAGGAAGGGCTCAGCTA+GGG | 0.582022 | 8_3:+65102581 | Msa1302530:CDS |
| CAGAAGCAATTCCAAAGAGA+GGG | 0.586284 | 8_3:-65101397 | None:intergenic |
| CACTTCTATATCATATAGCT+AGG | 0.587296 | 8_3:+65105191 | Msa1302530:CDS |
| GAAGAACATAGAAATTGTTG+AGG | 0.589403 | 8_3:-65101214 | None:intergenic |
| TTTGATAATATAGGTTATGG+TGG | 0.589723 | 8_3:+65104886 | Msa1302530:intron |
| CCTGGGATCATAAGAAGAAG+AGG | 0.590839 | 8_3:-65105229 | None:intergenic |
| AACAGGAAGTGGTAAAGCAG+AGG | 0.593621 | 8_3:-65101348 | None:intergenic |
| AACCAATAAGTTTCAACACA+TGG | 0.595683 | 8_3:+65102490 | Msa1302530:CDS |
| CTAGCTATATGATATAGAAG+TGG | 0.598049 | 8_3:-65105190 | None:intergenic |
| ACCGTCGGAGCAATCGGAGT+TGG | 0.598580 | 8_3:+65102335 | Msa1302530:CDS |
| AATACCAAACAGAAAACAAG+AGG | 0.598893 | 8_3:+65104925 | Msa1302530:CDS |
| GCAGAAGCAATTCCAAAGAG+AGG | 0.598997 | 8_3:-65101398 | None:intergenic |
| ACAGCGGCTGCCACCACCGT+CGG | 0.600123 | 8_3:+65102320 | Msa1302530:CDS |
| ATTCAGTAGCAATTGCTCCT+GGG | 0.601962 | 8_3:-65105246 | None:intergenic |
| TAGCTATATGATATAGAAGT+GGG | 0.604968 | 8_3:-65105189 | None:intergenic |
| GAGTAAAGGACACTTGAAGA+GGG | 0.605380 | 8_3:+65102620 | Msa1302530:CDS |
| TGAGTAAAGGACACTTGAAG+AGG | 0.607837 | 8_3:+65102619 | Msa1302530:CDS |
| TGCCGTGATGTTGATGCCGG+TGG | 0.610921 | 8_3:+65102284 | Msa1302530:CDS |
| AAGGTGACATCAGTGTTCTG+TGG | 0.613487 | 8_3:+65102177 | Msa1302530:intron |
| CAACATCAACCTCAACCTGA+AGG | 0.615326 | 8_3:+65101130 | Msa1302530:CDS |
| TGGGATAATAAGTGTAGCAG+TGG | 0.618230 | 8_3:-65105170 | None:intergenic |
| TTGCTTTGTGTTCTATGGAG+TGG | 0.619478 | 8_3:-65101164 | None:intergenic |
| CTACTTATAAGACTAACTGC+AGG | 0.624428 | 8_3:-65105115 | None:intergenic |
| AAGAGAGGGAACAGAAACAG+AGG | 0.638570 | 8_3:-65101383 | None:intergenic |
| TTTATGCCGTGCCAATTGGA+GGG | 0.639992 | 8_3:+65102394 | Msa1302530:CDS |
| CAGCCGCTGTAACAGCCCTG+TGG | 0.640090 | 8_3:-65102307 | None:intergenic |
| TGATTGTTAAGGTTGAGTGT+TGG | 0.642833 | 8_3:-65101012 | None:intergenic |
| GTTCTATGGAGTGGTAGAAG+TGG | 0.645537 | 8_3:-65101155 | None:intergenic |
| ACTCATCCCTCCAATTGGCA+CGG | 0.646058 | 8_3:-65102400 | None:intergenic |
| GGCCACCGGCATCAACATCA+CGG | 0.647085 | 8_3:-65102286 | None:intergenic |
| TAGAGCGGTGGTTCTAACGG+TGG | 0.651368 | 8_3:+65102371 | Msa1302530:CDS |
| AAAAGCAACTACATTTGAGG+GGG | 0.652988 | 8_3:-65105293 | None:intergenic |
| GAATAAGTTCAGTAGAGCGG+TGG | 0.658888 | 8_3:+65102359 | Msa1302530:CDS |
| TCTATGGAGTGGTAGAAGTG+GGG | 0.659872 | 8_3:-65101153 | None:intergenic |
| AATGAAACTTCCCAAAACAA+GGG | 0.680887 | 8_3:-65101459 | None:intergenic |
| GAGGGATGAGTACTTTGACA+GGG | 0.684482 | 8_3:+65102412 | Msa1302530:CDS |
| GTCCATGTAAGAATGAGCAA+CGG | 0.693112 | 8_3:-65101426 | None:intergenic |
| CATGCTCACAAAGAATGACG+TGG | 0.694517 | 8_3:-65102241 | None:intergenic |
| GGTGAATAAGTTCAGTAGAG+CGG | 0.695026 | 8_3:+65102356 | Msa1302530:CDS |
| ATACCAAACAGAAAACAAGA+GGG | 0.731604 | 8_3:+65104926 | Msa1302530:CDS |
| GAGCATGTGGATGCACAACG+TGG | 0.798016 | 8_3:+65102257 | Msa1302530:CDS |
| GGTGACATCAGTGTTCTGTG+GGG | 0.814024 | 8_3:+65102179 | Msa1302530:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CAATAATTTAACTTTAAAAT+GGG | - | chr8_3:65103338-65103357 | None:intergenic | 10.0% |
| !!! | TCAATAATTTAACTTTAAAA+TGG | - | chr8_3:65103339-65103358 | None:intergenic | 10.0% |
| !!! | TTTTTAAAAAGTTGTAATAT+TGG | - | chr8_3:65104394-65104413 | None:intergenic | 10.0% |
| !! | TAGAGAAATATTAAAACTTA+CGG | - | chr8_3:65101534-65101553 | None:intergenic | 15.0% |
| !!! | TCATTCATATATAATTTTCT+TGG | - | chr8_3:65101940-65101959 | None:intergenic | 15.0% |
| !!! | TATATTTTTGAATGATTAGA+AGG | + | chr8_3:65102031-65102050 | Msa1302530:intron | 15.0% |
| !!! | TTATCTTTATATGACTTTTA+TGG | + | chr8_3:65102793-65102812 | Msa1302530:intron | 15.0% |
| !! | TGATAAAAAAATATAGTCAA+TGG | - | chr8_3:65103403-65103422 | None:intergenic | 15.0% |
| !! | ATTAAAATTTAACTATGCTT+AGG | - | chr8_3:65103495-65103514 | None:intergenic | 15.0% |
| !! | GATATTAAAAAAAAGAATTG+AGG | + | chr8_3:65103946-65103965 | Msa1302530:intron | 15.0% |
| !!! | GATTTTTTGACAAAAAAAAT+TGG | - | chr8_3:65104292-65104311 | None:intergenic | 15.0% |
| !!! | TTTATTGATAATTCTGTAAT+TGG | + | chr8_3:65104440-65104459 | Msa1302530:intron | 15.0% |
| !!! | TTTGTCATTTTTGATAATAT+AGG | + | chr8_3:65104877-65104896 | Msa1302530:intron | 15.0% |
| !!! | ATTTTTGATAATATAGGTTA+TGG | + | chr8_3:65104883-65104902 | Msa1302530:intron | 15.0% |
| !! | TCAATAAATAAAATTTCGAC+AGG | - | chr8_3:65101640-65101659 | None:intergenic | 20.0% |
| !! | TTTATTGATATGAAATCGTT+TGG | + | chr8_3:65101652-65101671 | Msa1302530:intron | 20.0% |
| !! | TGAATACTTGATTAAAAGTT+TGG | - | chr8_3:65101700-65101719 | None:intergenic | 20.0% |
| !!! | TTGTTTTTCTTATATGCTTT+TGG | + | chr8_3:65102538-65102557 | Msa1302530:CDS | 20.0% |
| !! | ATGTTTCTTATAAATAAGTC+CGG | + | chr8_3:65103066-65103085 | Msa1302530:intron | 20.0% |
| !! | CTAAAAACATGACTAATATA+TGG | + | chr8_3:65103529-65103548 | Msa1302530:intron | 20.0% |
| !!! | AAGAGTAGATTTTAGAATAT+TGG | - | chr8_3:65103585-65103604 | None:intergenic | 20.0% |
| ! | TTGGATAGAAAAAAGGAATT+GGG | - | chr8_3:65101068-65101087 | None:intergenic | 25.0% |
| ! | TTTGGATAGAAAAAAGGAAT+TGG | - | chr8_3:65101069-65101088 | None:intergenic | 25.0% |
| !!! | TGTCATTTTGGATAGAAAAA+AGG | - | chr8_3:65101075-65101094 | None:intergenic | 25.0% |
| !!! | TTTTTTCTATCCAAAATGAC+AGG | + | chr8_3:65101074-65101093 | Msa1302530:exon | 25.0% |
| ! | AAGAACATAGAAATTGTTGA+GGG | - | chr8_3:65101216-65101235 | None:intergenic | 25.0% |
| ! | AACAATTTCTATGTTCTTCT+TGG | + | chr8_3:65101218-65101237 | Msa1302530:CDS | 25.0% |
| ! | AACAAAGAGACATATGAAAA+GGG | - | chr8_3:65101255-65101274 | None:intergenic | 25.0% |
| ! | TAACAAAGAGACATATGAAA+AGG | - | chr8_3:65101256-65101275 | None:intergenic | 25.0% |
| ! | AATATTAAAACTTACGGTCA+AGG | - | chr8_3:65101528-65101547 | None:intergenic | 25.0% |
| !!! | ATTCATTTTTAACCTCTCTA+TGG | + | chr8_3:65101724-65101743 | Msa1302530:intron | 25.0% |
| ! | GTATTGGATATGAAGAATTA+TGG | + | chr8_3:65101748-65101767 | Msa1302530:intron | 25.0% |
| ! | TATGAAGAATTATGGAATGT+TGG | + | chr8_3:65101756-65101775 | Msa1302530:intron | 25.0% |
| ! | AAAAGACCAAAAACTCAATT+TGG | - | chr8_3:65101963-65101982 | None:intergenic | 25.0% |
| !!! | TTTTTTTTATCCATTGATCG+TGG | + | chr8_3:65101980-65101999 | Msa1302530:intron | 25.0% |
| !!! | CAGAGTTTATTTATTTTGTG+AGG | + | chr8_3:65102055-65102074 | Msa1302530:intron | 25.0% |
| !!! | AGTTTATTTATTTTGTGAGG+TGG | + | chr8_3:65102058-65102077 | Msa1302530:intron | 25.0% |
| !!! | GTTTATTTATTTTGTGAGGT+GGG | + | chr8_3:65102059-65102078 | Msa1302530:intron | 25.0% |
| ! | AAATGATATATATTTCCGAC+CGG | + | chr8_3:65102120-65102139 | Msa1302530:intron | 25.0% |
| ! | GGTGTAAATTTGATATTGAT+TGG | + | chr8_3:65102438-65102457 | Msa1302530:CDS | 25.0% |
| !! | ATTTGATATTGATTGGAATG+TGG | + | chr8_3:65102445-65102464 | Msa1302530:CDS | 25.0% |
| !!! | TATCCTTCTTTTTCACATTA+TGG | + | chr8_3:65102685-65102704 | Msa1302530:intron | 25.0% |
| !!! | ATCCTTCTTTTTCACATTAT+GGG | + | chr8_3:65102686-65102705 | Msa1302530:intron | 25.0% |
| ! | ATGATTAATTTCATGCACTT+AGG | + | chr8_3:65102731-65102750 | Msa1302530:intron | 25.0% |
| ! | AAGTTAAGTTCATTTGATCA+TGG | - | chr8_3:65102859-65102878 | None:intergenic | 25.0% |
| ! | TTTCTTATAAATAAGACCAG+AGG | - | chr8_3:65102954-65102973 | None:intergenic | 25.0% |
| ! | CATTGCATAAATGATGTATT+TGG | - | chr8_3:65103031-65103050 | None:intergenic | 25.0% |
| ! | GTGGCAATAAATCAATAATA+AGG | - | chr8_3:65103232-65103251 | None:intergenic | 25.0% |
| !!! | ATTATTGATTTATTGCCACA+TGG | + | chr8_3:65103233-65103252 | Msa1302530:intron | 25.0% |
| !!! | ACTTTAAAATGGGAACAAAT+GGG | - | chr8_3:65103328-65103347 | None:intergenic | 25.0% |
| !!! | AACTTTAAAATGGGAACAAA+TGG | - | chr8_3:65103329-65103348 | None:intergenic | 25.0% |
| ! | AGATAGATTTACTCATTTAC+AGG | - | chr8_3:65103461-65103480 | None:intergenic | 25.0% |
| !!! | CAAGAGGATCTAATTTTAAT+AGG | + | chr8_3:65103849-65103868 | Msa1302530:intron | 25.0% |
| !!! | CTAATTTTAATAGGCCTAAA+AGG | + | chr8_3:65103858-65103877 | Msa1302530:intron | 25.0% |
| ! | AAGAAAAGAAACAAAAGAAG+TGG | + | chr8_3:65104062-65104081 | Msa1302530:intron | 25.0% |
| ! | ACAATGAATACAATCTATCT+TGG | + | chr8_3:65104154-65104173 | Msa1302530:intron | 25.0% |
| ! | AATATTTCATCAAACTCATG+TGG | + | chr8_3:65104255-65104274 | Msa1302530:intron | 25.0% |
| !! | TGACAAAAAAAATTGGTAAC+AGG | - | chr8_3:65104285-65104304 | None:intergenic | 25.0% |
| ! | AAAAGTTGTAATATTGGTCA+AGG | - | chr8_3:65104388-65104407 | None:intergenic | 25.0% |
| ! | GCTTCATTATCAATGTATTT+AGG | - | chr8_3:65104417-65104436 | None:intergenic | 25.0% |
| ! | TACTGCTTTAATTAATACGT+TGG | - | chr8_3:65104598-65104617 | None:intergenic | 25.0% |
| ! | AATTGATTGTTCACTATGAT+TGG | - | chr8_3:65104853-65104872 | None:intergenic | 25.0% |
| !! | TTTGATAATATAGGTTATGG+TGG | + | chr8_3:65104886-65104905 | Msa1302530:intron | 25.0% |
| ! | TAGCTATATGATATAGAAGT+GGG | - | chr8_3:65105192-65105211 | None:intergenic | 25.0% |
| GAGAAGAAGAATGATTGTTA+AGG | - | chr8_3:65101026-65101045 | None:intergenic | 30.0% | |
| TAGAAAAAAGGAATTGGGTA+AGG | - | chr8_3:65101063-65101082 | None:intergenic | 30.0% | |
| ! | AAAAGGATTTGAGGTTGAAA+GGG | - | chr8_3:65101190-65101209 | None:intergenic | 30.0% |
| ! | AAAAAGGATTTGAGGTTGAA+AGG | - | chr8_3:65101191-65101210 | None:intergenic | 30.0% |
| GAAGAACATAGAAATTGTTG+AGG | - | chr8_3:65101217-65101236 | None:intergenic | 30.0% | |
| CATATGAAAAGGGACAATAA+AGG | - | chr8_3:65101245-65101264 | None:intergenic | 30.0% | |
| AATGAAACTTCCCAAAACAA+GGG | - | chr8_3:65101462-65101481 | None:intergenic | 30.0% | |
| TTGATATGAAATCGTTTGGT+CGG | + | chr8_3:65101656-65101675 | Msa1302530:intron | 30.0% | |
| ATTGAGTCGTAAGAAAATTG+TGG | - | chr8_3:65101814-65101833 | None:intergenic | 30.0% | |
| ! | GAATGACCAAATTGAGTTTT+TGG | + | chr8_3:65101954-65101973 | Msa1302530:intron | 30.0% |
| AATGATATATATTTCCGACC+GGG | + | chr8_3:65102121-65102140 | Msa1302530:intron | 30.0% | |
| GTGAATGATATGATGTTTGA+AGG | + | chr8_3:65102158-65102177 | Msa1302530:intron | 30.0% | |
| AACCAATAAGTTTCAACACA+TGG | + | chr8_3:65102490-65102509 | Msa1302530:CDS | 30.0% | |
| AACCATGTGTTGAAACTTAT+TGG | - | chr8_3:65102495-65102514 | None:intergenic | 30.0% | |
| ATAAGAAAAACAATCGCTAC+CGG | - | chr8_3:65102531-65102550 | None:intergenic | 30.0% | |
| AAGTGTCCTTTACTCAAATA+AGG | - | chr8_3:65102615-65102634 | None:intergenic | 30.0% | |
| TTCCCATAATGTGAAAAAGA+AGG | - | chr8_3:65102691-65102710 | None:intergenic | 30.0% | |
| !! | TATCATTTTTACTACTCCTC+TGG | + | chr8_3:65102935-65102954 | Msa1302530:intron | 30.0% |
| TTTCTTATAAATAAGTCCGG+AGG | + | chr8_3:65103069-65103088 | Msa1302530:intron | 30.0% | |
| TTCTTATAAATAAGTCCGGA+GGG | + | chr8_3:65103070-65103089 | Msa1302530:intron | 30.0% | |
| GTTATCTTTGTGATGAATAG+AGG | + | chr8_3:65103194-65103213 | Msa1302530:intron | 30.0% | |
| !! | CTTTAAAATGGGAACAAATG+GGG | - | chr8_3:65103327-65103346 | None:intergenic | 30.0% |
| !! | TATAAGGTGTCGTATATATG+CGG | + | chr8_3:65103766-65103785 | Msa1302530:intron | 30.0% |
| AATTAAGCAAATCATATGGC+AGG | - | chr8_3:65104033-65104052 | None:intergenic | 30.0% | |
| GCACAATTAAGCAAATCATA+TGG | - | chr8_3:65104037-65104056 | None:intergenic | 30.0% | |
| ATGCAGTTAGCAATTTCAAT+GGG | - | chr8_3:65104127-65104146 | None:intergenic | 30.0% | |
| TTGCAACAAGAGACAAAATT+AGG | - | chr8_3:65104232-65104251 | None:intergenic | 30.0% | |
| !!! | TTCTGTAATTGGTTTTTTGC+AGG | + | chr8_3:65104451-65104470 | Msa1302530:intron | 30.0% |
| !!! | AAAATGGTGCTATCTGTTTT+TGG | + | chr8_3:65104493-65104512 | Msa1302530:CDS | 30.0% |
| !!! | AAATGGTGCTATCTGTTTTT+GGG | + | chr8_3:65104494-65104513 | Msa1302530:CDS | 30.0% |
| TCATATTATGGATGACAAGA+AGG | + | chr8_3:65104640-65104659 | Msa1302530:intron | 30.0% | |
| ACATGACACTAACATGATAT+TGG | - | chr8_3:65104794-65104813 | None:intergenic | 30.0% | |
| AATACCAAACAGAAAACAAG+AGG | + | chr8_3:65104925-65104944 | Msa1302530:CDS | 30.0% | |
| ATACCAAACAGAAAACAAGA+GGG | + | chr8_3:65104926-65104945 | Msa1302530:CDS | 30.0% | |
| ATGAATGCAAGAAATTACCT+TGG | + | chr8_3:65104969-65104988 | Msa1302530:CDS | 30.0% | |
| AGTAACAAAATTAGGTTCCA+AGG | - | chr8_3:65104989-65105008 | None:intergenic | 30.0% | |
| ! | TGGAACCTAATTTTGTTACT+TGG | + | chr8_3:65104989-65105008 | Msa1302530:CDS | 30.0% |
| CTAGCTATATGATATAGAAG+TGG | - | chr8_3:65105193-65105212 | None:intergenic | 30.0% | |
| CACTTCTATATCATATAGCT+AGG | + | chr8_3:65105191-65105210 | Msa1302530:CDS | 30.0% | |
| GCAAATAATTTACCTAGAGA+TGG | - | chr8_3:65105406-65105425 | None:intergenic | 30.0% | |
| TGATTGTTAAGGTTGAGTGT+TGG | - | chr8_3:65101015-65101034 | None:intergenic | 35.0% | |
| GAAATTGTTGAGGGTGAAAA+AGG | - | chr8_3:65101207-65101226 | None:intergenic | 35.0% | |
| ! | ATGTTACGGCTATTGTTGTT+GGG | - | chr8_3:65101290-65101309 | None:intergenic | 35.0% |
| CAATAACAGCAAGCATGTTA+CGG | - | chr8_3:65101304-65101323 | None:intergenic | 35.0% | |
| ! | TTATTGCTTGGGTTTTCAGT+TGG | + | chr8_3:65101318-65101337 | Msa1302530:CDS | 35.0% |
| !!! | GATGTCATTACCCTTGTTTT+GGG | + | chr8_3:65101449-65101468 | Msa1302530:CDS | 35.0% |
| GAATGAAACTTCCCAAAACA+AGG | - | chr8_3:65101463-65101482 | None:intergenic | 35.0% | |
| TATGAACATGAACAACACGA+TGG | + | chr8_3:65101613-65101632 | Msa1302530:intron | 35.0% | |
| TTAACCTCTCTATGGAGTAT+TGG | + | chr8_3:65101732-65101751 | Msa1302530:intron | 35.0% | |
| ATATCCAATACTCCATAGAG+AGG | - | chr8_3:65101739-65101758 | None:intergenic | 35.0% | |
| ! | TTTTTATCCATTGATCGTGG+AGG | + | chr8_3:65101983-65102002 | Msa1302530:intron | 35.0% |
| ! | TTTTATCCATTGATCGTGGA+GGG | + | chr8_3:65101984-65102003 | Msa1302530:intron | 35.0% |
| ATGATATATATTTCCGACCG+GGG | + | chr8_3:65102122-65102141 | Msa1302530:intron | 35.0% | |
| ! | AATCCAGCGCTATTGTTATT+GGG | + | chr8_3:65102210-65102229 | Msa1302530:CDS | 35.0% |
| !!! | AAACTTATTGGTTTTGCACC+AGG | - | chr8_3:65102483-65102502 | None:intergenic | 35.0% |
| !! | ATGGTTCTTCTTTGCTTTTC+CGG | + | chr8_3:65102509-65102528 | Msa1302530:CDS | 35.0% |
| TTCTCTGCTTGATTTACCTA+AGG | + | chr8_3:65102565-65102584 | Msa1302530:CDS | 35.0% | |
| TGCTTGATTTACCTAAGGAA+GGG | + | chr8_3:65102570-65102589 | Msa1302530:CDS | 35.0% | |
| ! | CTCTCTCCTTATTTGAGTAA+AGG | + | chr8_3:65102606-65102625 | Msa1302530:CDS | 35.0% |
| GTAGATATGATGACTAGATG+TGG | + | chr8_3:65102815-65102834 | Msa1302530:intron | 35.0% | |
| GATAAAATACTTACTCCCTC+CGG | - | chr8_3:65103088-65103107 | None:intergenic | 35.0% | |
| ! | ACTCATTTACAGGTTGAAAC+AGG | - | chr8_3:65103451-65103470 | None:intergenic | 35.0% |
| AGTTCATTTAGCATAGTGTC+CGG | + | chr8_3:65103606-65103625 | Msa1302530:intron | 35.0% | |
| AAATGACTACCGTATACATG+AGG | + | chr8_3:65103804-65103823 | Msa1302530:intron | 35.0% | |
| AAATTAGATCCTCTTGCCTT+TGG | - | chr8_3:65103845-65103864 | None:intergenic | 35.0% | |
| !!! | TCCTCTTGTTTTAGCCTTTT+AGG | - | chr8_3:65103875-65103894 | None:intergenic | 35.0% |
| GGGTACTAAAAAAGATTGGA+GGG | + | chr8_3:65103909-65103928 | Msa1302530:intron | 35.0% | |
| AAAAAAAGAATTGAGGCCCA+TGG | + | chr8_3:65103953-65103972 | Msa1302530:intron | 35.0% | |
| GATGCAGTTAGCAATTTCAA+TGG | - | chr8_3:65104128-65104147 | None:intergenic | 35.0% | |
| ! | ATTTTCTCTGCGAAAGACAT+GGG | - | chr8_3:65104478-65104497 | None:intergenic | 35.0% |
| !!! | AATGGTGCTATCTGTTTTTG+GGG | + | chr8_3:65104495-65104514 | Msa1302530:CDS | 35.0% |
| TGCAGTTGCTGATCATATTA+TGG | + | chr8_3:65104628-65104647 | Msa1302530:intron | 35.0% | |
| CAGCTCCAAGTAACAAAATT+AGG | - | chr8_3:65104997-65105016 | None:intergenic | 35.0% | |
| !! | CTAATTTTGTTACTTGGAGC+TGG | + | chr8_3:65104995-65105014 | Msa1302530:CDS | 35.0% |
| CTTAGAAGATGCTCCATATT+TGG | + | chr8_3:65105084-65105103 | Msa1302530:CDS | 35.0% | |
| CTACTTATAAGACTAACTGC+AGG | - | chr8_3:65105118-65105137 | None:intergenic | 35.0% | |
| AAAAGCAACTACATTTGAGG+GGG | - | chr8_3:65105296-65105315 | None:intergenic | 35.0% | |
| CAAAAGCAACTACATTTGAG+GGG | - | chr8_3:65105297-65105316 | None:intergenic | 35.0% | |
| GCAAAAGCAACTACATTTGA+GGG | - | chr8_3:65105298-65105317 | None:intergenic | 35.0% | |
| AGCAAAAGCAACTACATTTG+AGG | - | chr8_3:65105299-65105318 | None:intergenic | 35.0% | |
| !!! | AATGTAGTTGCTTTTGCTAC+TGG | + | chr8_3:65105301-65105320 | Msa1302530:CDS | 35.0% |
| ATTCAAGATACGCTCAAAGT+TGG | + | chr8_3:65105334-65105353 | Msa1302530:CDS | 35.0% | |
| ! | TCAGTTTTTATGCCATCTCT+AGG | + | chr8_3:65105391-65105410 | Msa1302530:CDS | 35.0% |
| !! | ACTGTGTTCTCCTGTCATTT+TGG | - | chr8_3:65101087-65101106 | None:intergenic | 40.0% |
| !! | GAGGTTGATGTTGGATTCAT+CGG | - | chr8_3:65101123-65101142 | None:intergenic | 40.0% |
| TTCTATGGAGTGGTAGAAGT+GGG | - | chr8_3:65101157-65101176 | None:intergenic | 40.0% | |
| TTGCTTTGTGTTCTATGGAG+TGG | - | chr8_3:65101167-65101186 | None:intergenic | 40.0% | |
| ! | AAGGGTTGCTTTGTGTTCTA+TGG | - | chr8_3:65101172-65101191 | None:intergenic | 40.0% |
| TGAGGGTGAAAAAGGATTTG+AGG | - | chr8_3:65101199-65101218 | None:intergenic | 40.0% | |
| CATGTTACGGCTATTGTTGT+TGG | - | chr8_3:65101291-65101310 | None:intergenic | 40.0% | |
| !! | ACATGCTTGCTGTTATTGCT+TGG | + | chr8_3:65101306-65101325 | Msa1302530:CDS | 40.0% |
| !! | CATGCTTGCTGTTATTGCTT+GGG | + | chr8_3:65101307-65101326 | Msa1302530:CDS | 40.0% |
| CACATAGAAGTAACAGGAAG+TGG | - | chr8_3:65101362-65101381 | None:intergenic | 40.0% | |
| AGAGGACACATAGAAGTAAC+AGG | - | chr8_3:65101368-65101387 | None:intergenic | 40.0% | |
| CAGAAGCAATTCCAAAGAGA+GGG | - | chr8_3:65101400-65101419 | None:intergenic | 40.0% | |
| TACCGTTGCTCATTCTTACA+TGG | + | chr8_3:65101424-65101443 | Msa1302530:CDS | 40.0% | |
| GTCCATGTAAGAATGAGCAA+CGG | - | chr8_3:65101429-65101448 | None:intergenic | 40.0% | |
| !! | CGATGTCATTACCCTTGTTT+TGG | + | chr8_3:65101448-65101467 | Msa1302530:CDS | 40.0% |
| CTACAACGTTCACAGAAGAT+TGG | + | chr8_3:65101502-65101521 | Msa1302530:CDS | 40.0% | |
| TCACAACCAATCATAAACCC+CGG | - | chr8_3:65102142-65102161 | None:intergenic | 40.0% | |
| ! | AACAATAGCGCTGGATTCAA+CGG | - | chr8_3:65102207-65102226 | None:intergenic | 40.0% |
| GAATCCAGCGCTATTGTTAT+TGG | + | chr8_3:65102209-65102228 | Msa1302530:CDS | 40.0% | |
| GGTGAATAAGTTCAGTAGAG+CGG | + | chr8_3:65102356-65102375 | Msa1302530:CDS | 40.0% | |
| ! | AAAGTACTCATCCCTCCAAT+TGG | - | chr8_3:65102408-65102427 | None:intergenic | 40.0% |
| CTGCTTGATTTACCTAAGGA+AGG | + | chr8_3:65102569-65102588 | Msa1302530:CDS | 40.0% | |
| TGAGTAAAGGACACTTGAAG+AGG | + | chr8_3:65102619-65102638 | Msa1302530:CDS | 40.0% | |
| GAGTAAAGGACACTTGAAGA+GGG | + | chr8_3:65102620-65102639 | Msa1302530:CDS | 40.0% | |
| AAGAGGGAATTAGAAGCTCT+AGG | + | chr8_3:65102636-65102655 | Msa1302530:CDS | 40.0% | |
| TAACGACACGTAAGTAGACA+GGG | - | chr8_3:65103178-65103197 | None:intergenic | 40.0% | |
| ATAACGACACGTAAGTAGAC+AGG | - | chr8_3:65103179-65103198 | None:intergenic | 40.0% | |
| ATTTATTGCCACATGGCTCA+TGG | + | chr8_3:65103240-65103259 | Msa1302530:intron | 40.0% | |
| GATATTATCCATGAGCCATG+TGG | - | chr8_3:65103251-65103270 | None:intergenic | 40.0% | |
| ATGACACATCCACATTGGAA+TGG | - | chr8_3:65103281-65103300 | None:intergenic | 40.0% | |
| TATATATGCGGTACACCCAA+AGG | + | chr8_3:65103778-65103797 | Msa1302530:intron | 40.0% | |
| !! | CGGTAGTCATTTTCACCTTT+GGG | - | chr8_3:65103796-65103815 | None:intergenic | 40.0% |
| !! | ACGGTAGTCATTTTCACCTT+TGG | - | chr8_3:65103797-65103816 | None:intergenic | 40.0% |
| GCCTAAAAGGCTAAAACAAG+AGG | + | chr8_3:65103871-65103890 | Msa1302530:intron | 40.0% | |
| ACAAGAGGACAGAAAATGAC+TGG | + | chr8_3:65103886-65103905 | Msa1302530:intron | 40.0% | |
| CAAGAGGACAGAAAATGACT+GGG | + | chr8_3:65103887-65103906 | Msa1302530:intron | 40.0% | |
| AAGAGGACAGAAAATGACTG+GGG | + | chr8_3:65103888-65103907 | Msa1302530:intron | 40.0% | |
| !! | CTGGGGGTACTAAAAAAGAT+TGG | + | chr8_3:65103905-65103924 | Msa1302530:intron | 40.0% |
| ! | GGGGTACTAAAAAAGATTGG+AGG | + | chr8_3:65103908-65103927 | Msa1302530:intron | 40.0% |
| TGTACCAGACTTGTGTGAAA+TGG | + | chr8_3:65104096-65104115 | Msa1302530:intron | 40.0% | |
| CAATCCATTTCACACAAGTC+TGG | - | chr8_3:65104103-65104122 | None:intergenic | 40.0% | |
| ! | CATTTTCTCTGCGAAAGACA+TGG | - | chr8_3:65104479-65104498 | None:intergenic | 40.0% |
| CATGTCTTTCGCAGAGAAAA+TGG | + | chr8_3:65104477-65104496 | Msa1302530:CDS | 40.0% | |
| ATGGAAAAAAGTTCCCCATC+CGG | - | chr8_3:65104682-65104701 | None:intergenic | 40.0% | |
| !!! | ACTTTTTTCCATGGCCTTGT+TGG | + | chr8_3:65104690-65104709 | Msa1302530:intron | 40.0% |
| !!! | TCACCCTCTTGTTTTCTGTT+TGG | - | chr8_3:65104932-65104951 | None:intergenic | 40.0% |
| TGGGATAATAAGTGTAGCAG+TGG | - | chr8_3:65105173-65105192 | None:intergenic | 40.0% | |
| ATTCAGTAGCAATTGCTCCT+GGG | - | chr8_3:65105249-65105268 | None:intergenic | 40.0% | |
| AATTCAGTAGCAATTGCTCC+TGG | - | chr8_3:65105250-65105269 | None:intergenic | 40.0% | |
| TGGCATAAAAACTGAGAGCA+CGG | - | chr8_3:65105386-65105405 | None:intergenic | 40.0% | |
| !! | CTTCAGGTTGAGGTTGATGT+TGG | - | chr8_3:65101132-65101151 | None:intergenic | 45.0% |
| CAACATCAACCTCAACCTGA+AGG | + | chr8_3:65101130-65101149 | Msa1302530:CDS | 45.0% | |
| TCTATGGAGTGGTAGAAGTG+GGG | - | chr8_3:65101156-65101175 | None:intergenic | 45.0% | |
| GTTCTATGGAGTGGTAGAAG+TGG | - | chr8_3:65101158-65101177 | None:intergenic | 45.0% | |
| ! | TTGCTTGGGTTTTCAGTTGG+TGG | + | chr8_3:65101321-65101340 | Msa1302530:CDS | 45.0% |
| ! | TGCTTGGGTTTTCAGTTGGT+GGG | + | chr8_3:65101322-65101341 | Msa1302530:CDS | 45.0% |
| AACAGGAAGTGGTAAAGCAG+AGG | - | chr8_3:65101351-65101370 | None:intergenic | 45.0% | |
| AAGAGAGGGAACAGAAACAG+AGG | - | chr8_3:65101386-65101405 | None:intergenic | 45.0% | |
| !! | CTGTTTCTGTTCCCTCTCTT+TGG | + | chr8_3:65101386-65101405 | Msa1302530:CDS | 45.0% |
| GCAGAAGCAATTCCAAAGAG+AGG | - | chr8_3:65101401-65101420 | None:intergenic | 45.0% | |
| GTGAACGTTGTAGCGTTCAA+CGG | - | chr8_3:65101495-65101514 | None:intergenic | 45.0% | |
| AACCAATCATAAACCCCGGT+CGG | - | chr8_3:65102138-65102157 | None:intergenic | 45.0% | |
| AAGGTGACATCAGTGTTCTG+TGG | + | chr8_3:65102177-65102196 | Msa1302530:intron | 45.0% | |
| AGGTGACATCAGTGTTCTGT+GGG | + | chr8_3:65102178-65102197 | Msa1302530:intron | 45.0% | |
| AGACCCAATAACAATAGCGC+TGG | - | chr8_3:65102216-65102235 | None:intergenic | 45.0% | |
| CATGCTCACAAAGAATGACG+TGG | - | chr8_3:65102244-65102263 | None:intergenic | 45.0% | |
| CGTCATTCTTTGTGAGCATG+TGG | + | chr8_3:65102244-65102263 | Msa1302530:CDS | 45.0% | |
| GAATAAGTTCAGTAGAGCGG+TGG | + | chr8_3:65102359-65102378 | Msa1302530:CDS | 45.0% | |
| TTTATGCCGTGCCAATTGGA+GGG | + | chr8_3:65102394-65102413 | Msa1302530:CDS | 45.0% | |
| GAGGGATGAGTACTTTGACA+GGG | + | chr8_3:65102412-65102431 | Msa1302530:CDS | 45.0% | |
| ATGAGTACTTTGACAGGGAC+AGG | + | chr8_3:65102417-65102436 | Msa1302530:CDS | 45.0% | |
| !! | ATGTGGAAGAGTCTTGTTCC+TGG | + | chr8_3:65102462-65102481 | Msa1302530:CDS | 45.0% |
| GGCTCATGGATAATATCAGC+TGG | + | chr8_3:65103254-65103273 | Msa1302530:intron | 45.0% | |
| GACAGATGACACATCCACAT+TGG | - | chr8_3:65103286-65103305 | None:intergenic | 45.0% | |
| TGGGAACAAATGGGGTCTAT+TGG | - | chr8_3:65103319-65103338 | None:intergenic | 45.0% | |
| !! | TCTTGCCTTTGGTGTTAGGT+GGG | - | chr8_3:65103834-65103853 | None:intergenic | 45.0% |
| !! | ATCCTCTTGCCTTTGGTGTT+AGG | - | chr8_3:65103838-65103857 | None:intergenic | 45.0% |
| AGAGGACAGAAAATGACTGG+GGG | + | chr8_3:65103889-65103908 | Msa1302530:intron | 45.0% | |
| TTGGAGGGCAGTAGTATTAG+TGG | + | chr8_3:65103924-65103943 | Msa1302530:intron | 45.0% | |
| AAGCAAATCATATGGCAGGC+AGG | - | chr8_3:65104029-65104048 | None:intergenic | 45.0% | |
| AGGATCACAGATGACATTCC+CGG | + | chr8_3:65104660-65104679 | Msa1302530:intron | 45.0% | |
| TGGAAAAAAGTTCCCCATCC+GGG | - | chr8_3:65104681-65104700 | None:intergenic | 45.0% | |
| !!! | GGATGGGGAACTTTTTTCCA+TGG | + | chr8_3:65104681-65104700 | Msa1302530:intron | 45.0% |
| TGACACTTCCATCACCAACA+AGG | - | chr8_3:65104707-65104726 | None:intergenic | 45.0% | |
| ACAAGAGGGTGAGAAGCTAA+TGG | + | chr8_3:65104940-65104959 | Msa1302530:CDS | 45.0% | |
| ! | AGGGTGAGAAGCTAATGGAT+TGG | + | chr8_3:65104945-65104964 | Msa1302530:CDS | 45.0% |
| !!! | GCTGGTTTTGCTTTAGCTGA+TGG | + | chr8_3:65105013-65105032 | Msa1302530:CDS | 45.0% |
| GCTGATGGAGTTCAATCTAG+TGG | + | chr8_3:65105028-65105047 | Msa1302530:CDS | 45.0% | |
| GCAGGAGCAATTGCCAAATA+TGG | - | chr8_3:65105100-65105119 | None:intergenic | 45.0% | |
| CCTGGGATCATAAGAAGAAG+AGG | - | chr8_3:65105232-65105251 | None:intergenic | 45.0% | |
| CCTCTTCTTCTTATGATCCC+AGG | + | chr8_3:65105229-65105248 | Msa1302530:CDS | 45.0% | |
| ! | CAAAGTTGGTCTGCCACTTA+AGG | + | chr8_3:65105348-65105367 | Msa1302530:CDS | 45.0% |
| !!! | TTTTTTAAAAGATAATTATA+AGG | + | chr8_3:65103750-65103769 | Msa1302530:intron | 5.0% |
| !! | CTTTAAATTAAAAAATTTAA+GGG | - | chr8_3:65105446-65105465 | None:intergenic | 5.0% |
| !! | ACTTTAAATTAAAAAATTTA+AGG | - | chr8_3:65105447-65105466 | None:intergenic | 5.0% |
| CCTAATCCCTCCACGATCAA+TGG | - | chr8_3:65101993-65102012 | None:intergenic | 50.0% | |
| CCATTGATCGTGGAGGGATT+AGG | + | chr8_3:65101990-65102009 | Msa1302530:intron | 50.0% | |
| TTCCGACCGGGGTTTATGAT+TGG | + | chr8_3:65102133-65102152 | Msa1302530:intron | 50.0% | |
| GGTGACATCAGTGTTCTGTG+GGG | + | chr8_3:65102179-65102198 | Msa1302530:intron | 50.0% | |
| !! | CAGTAGAGCGGTGGTTCTAA+CGG | + | chr8_3:65102368-65102387 | Msa1302530:CDS | 50.0% |
| GTGGTTTATGCCGTGCCAAT+TGG | + | chr8_3:65102390-65102409 | Msa1302530:CDS | 50.0% | |
| GTTTATGCCGTGCCAATTGG+AGG | + | chr8_3:65102393-65102412 | Msa1302530:CDS | 50.0% | |
| ACTCATCCCTCCAATTGGCA+CGG | - | chr8_3:65102403-65102422 | None:intergenic | 50.0% | |
| GGAGGGATGAGTACTTTGAC+AGG | + | chr8_3:65102411-65102430 | Msa1302530:CDS | 50.0% | |
| TCAGCTGGTCCATTCCAATG+TGG | + | chr8_3:65103269-65103288 | Msa1302530:intron | 50.0% | |
| ! | ATTCTTAGGGACGGCTCTGA+TGG | - | chr8_3:65103645-65103664 | None:intergenic | 50.0% |
| CAGAGCCGTCCCTAAGAATT+CGG | + | chr8_3:65103646-65103665 | Msa1302530:intron | 50.0% | |
| AGCCTCCGAATTCTTAGGGA+CGG | - | chr8_3:65103654-65103673 | None:intergenic | 50.0% | |
| TCCCTAAGAATTCGGAGGCT+CGG | + | chr8_3:65103654-65103673 | Msa1302530:intron | 50.0% | |
| !! | TCGGCTCTGGGAATGAAAAG+AGG | + | chr8_3:65103673-65103692 | Msa1302530:intron | 50.0% |
| !! | CGGCTCTGGGAATGAAAAGA+GGG | + | chr8_3:65103674-65103693 | Msa1302530:intron | 50.0% |
| GTGGGGGTTCCTCATGTATA+CGG | - | chr8_3:65103816-65103835 | None:intergenic | 50.0% | |
| !! | TTGCCTTTGGTGTTAGGTGG+GGG | - | chr8_3:65103832-65103851 | None:intergenic | 50.0% |
| !! | CTTGCCTTTGGTGTTAGGTG+GGG | - | chr8_3:65103833-65103852 | None:intergenic | 50.0% |
| !! | CTCTTGCCTTTGGTGTTAGG+TGG | - | chr8_3:65103835-65103854 | None:intergenic | 50.0% |
| CACCTAACACCAAAGGCAAG+AGG | + | chr8_3:65103833-65103852 | Msa1302530:intron | 50.0% | |
| GCAAACAGCTCAACAGAGCT+GGG | - | chr8_3:65103989-65104008 | None:intergenic | 50.0% | |
| TGCAAACAGCTCAACAGAGC+TGG | - | chr8_3:65103990-65104009 | None:intergenic | 50.0% | |
| TCACAGATGACATTCCCGGA+TGG | + | chr8_3:65104664-65104683 | Msa1302530:intron | 50.0% | |
| CACAGATGACATTCCCGGAT+GGG | + | chr8_3:65104665-65104684 | Msa1302530:intron | 50.0% | |
| ACAGATGACATTCCCGGATG+GGG | + | chr8_3:65104666-65104685 | Msa1302530:intron | 50.0% | |
| !! | TTCCATGGCCTTGTTGGTGA+TGG | + | chr8_3:65104696-65104715 | Msa1302530:intron | 50.0% |
| TTCCATCACCAACAAGGCCA+TGG | - | chr8_3:65104701-65104720 | None:intergenic | 50.0% | |
| ACATTTGAGGGGGTTGACGT+GGG | - | chr8_3:65105286-65105305 | None:intergenic | 50.0% | |
| TACATTTGAGGGGGTTGACG+TGG | - | chr8_3:65105287-65105306 | None:intergenic | 50.0% | |
| ! | GTCTGCCACTTAAGGTTGCT+GGG | + | chr8_3:65105356-65105375 | Msa1302530:CDS | 50.0% |
| GCTATCCCAGCAACCTTAAG+TGG | - | chr8_3:65105364-65105383 | None:intergenic | 50.0% | |
| GAGCATGTGGATGCACAACG+TGG | + | chr8_3:65102257-65102276 | Msa1302530:CDS | 55.0% | |
| AGCTGCCGTGATGTTGATGC+CGG | + | chr8_3:65102281-65102300 | Msa1302530:CDS | 55.0% | |
| ACCAACTCCGATTGCTCCGA+CGG | - | chr8_3:65102339-65102358 | None:intergenic | 55.0% | |
| !! | TAGAGCGGTGGTTCTAACGG+TGG | + | chr8_3:65102371-65102390 | Msa1302530:CDS | 55.0% |
| ACCTAAGGAAGGGCTCAGCT+AGG | + | chr8_3:65102580-65102599 | Msa1302530:CDS | 55.0% | |
| CCTAAGGAAGGGCTCAGCTA+GGG | + | chr8_3:65102581-65102600 | Msa1302530:CDS | 55.0% | |
| TGATGGCAGGGATAACAGGC+CGG | - | chr8_3:65103628-65103647 | None:intergenic | 55.0% | |
| GCTCTGATGGCAGGGATAAC+AGG | - | chr8_3:65103632-65103651 | None:intergenic | 55.0% | |
| AGCCGTCCCTAAGAATTCGG+AGG | + | chr8_3:65103649-65103668 | Msa1302530:intron | 55.0% | |
| GCCGAGCCTCCGAATTCTTA+GGG | - | chr8_3:65103658-65103677 | None:intergenic | 55.0% | |
| AGCCGAGCCTCCGAATTCTT+AGG | - | chr8_3:65103659-65103678 | None:intergenic | 55.0% | |
| GAACCCCCACCTAACACCAA+AGG | + | chr8_3:65103826-65103845 | Msa1302530:intron | 55.0% | |
| AGAATTGAGGCCCATGGCTG+AGG | + | chr8_3:65103959-65103978 | Msa1302530:intron | 55.0% | |
| GAATTGAGGCCCATGGCTGA+GGG | + | chr8_3:65103960-65103979 | Msa1302530:intron | 55.0% | |
| AATCATATGGCAGGCAGGCC+CGG | - | chr8_3:65104024-65104043 | None:intergenic | 55.0% | |
| ! | GGTCTGCCACTTAAGGTTGC+TGG | + | chr8_3:65105355-65105374 | Msa1302530:CDS | 55.0% |
| !! | GAAGTGGGGCCTTCAGGTTG+AGG | - | chr8_3:65101142-65101161 | None:intergenic | 60.0% |
| GTGGTAGAAGTGGGGCCTTC+AGG | - | chr8_3:65101148-65101167 | None:intergenic | 60.0% | |
| TGCCGTGATGTTGATGCCGG+TGG | + | chr8_3:65102284-65102303 | Msa1302530:CDS | 60.0% | |
| GGCCACCGGCATCAACATCA+CGG | - | chr8_3:65102289-65102308 | None:intergenic | 60.0% | |
| ATGTTGATGCCGGTGGCCAC+AGG | + | chr8_3:65102291-65102310 | Msa1302530:CDS | 60.0% | |
| TGTTGATGCCGGTGGCCACA+GGG | + | chr8_3:65102292-65102311 | Msa1302530:CDS | 60.0% | |
| TGTAACAGCCCTGTGGCCAC+CGG | - | chr8_3:65102303-65102322 | None:intergenic | 60.0% | |
| TGGCCACAGGGCTGTTACAG+CGG | + | chr8_3:65102304-65102323 | Msa1302530:CDS | 60.0% | |
| AACTCCGATTGCTCCGACGG+TGG | - | chr8_3:65102336-65102355 | None:intergenic | 60.0% | |
| ACCGTCGGAGCAATCGGAGT+TGG | + | chr8_3:65102335-65102354 | Msa1302530:CDS | 60.0% | |
| CCCTAGCTGAGCCCTTCCTT+AGG | - | chr8_3:65102584-65102603 | None:intergenic | 60.0% | |
| ! | TAGGGACGGCTCTGATGGCA+GGG | - | chr8_3:65103640-65103659 | None:intergenic | 60.0% |
| ! | TTAGGGACGGCTCTGATGGC+AGG | - | chr8_3:65103641-65103660 | None:intergenic | 60.0% |
| AGAATTCGGAGGCTCGGCTC+TGG | + | chr8_3:65103660-65103679 | Msa1302530:intron | 60.0% | |
| GAATTCGGAGGCTCGGCTCT+GGG | + | chr8_3:65103661-65103680 | Msa1302530:intron | 60.0% | |
| TGAGCTGTTTGCACCCCCTC+AGG | + | chr8_3:65103997-65104016 | Msa1302530:intron | 60.0% | |
| GAGCTGTTTGCACCCCCTCA+GGG | + | chr8_3:65103998-65104017 | Msa1302530:intron | 60.0% | |
| CAGCCGCTGTAACAGCCCTG+TGG | - | chr8_3:65102310-65102329 | None:intergenic | 65.0% | |
| GCCACCACCGTCGGAGCAAT+CGG | + | chr8_3:65102329-65102348 | Msa1302530:CDS | 65.0% | |
| TCCGATTGCTCCGACGGTGG+TGG | - | chr8_3:65102333-65102352 | None:intergenic | 65.0% | |
| TTGAGGCCCATGGCTGAGGG+AGG | + | chr8_3:65103963-65103982 | Msa1302530:intron | 65.0% | |
| TGTTTGCACCCCCTCAGGGC+CGG | + | chr8_3:65104002-65104021 | Msa1302530:intron | 65.0% | |
| ACAGCGGCTGCCACCACCGT+CGG | + | chr8_3:65102320-65102339 | Msa1302530:CDS | 70.0% | |
| GCTGGGCCTCCCTCAGCCAT+GGG | - | chr8_3:65103972-65103991 | None:intergenic | 70.0% | |
| AGCTGGGCCTCCCTCAGCCA+TGG | - | chr8_3:65103973-65103992 | None:intergenic | 70.0% | |
| GTTTGCACCCCCTCAGGGCC+GGG | + | chr8_3:65104003-65104022 | Msa1302530:intron | 70.0% | |
| ! | AGGCAGGCCCGGCCCTGAGG+GGG | - | chr8_3:65104013-65104032 | None:intergenic | 80.0% |
| ! | CAGGCAGGCCCGGCCCTGAG+GGG | - | chr8_3:65104014-65104033 | None:intergenic | 80.0% |
| ! | GCAGGCAGGCCCGGCCCTGA+GGG | - | chr8_3:65104015-65104034 | None:intergenic | 80.0% |
| ! | GGCAGGCAGGCCCGGCCCTG+AGG | - | chr8_3:65104016-65104035 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 65101006 | 65105549 | 65101006 | ID=Msa1302530;Name=Msa1302530 |
| chr8_3 | mRNA | 65101006 | 65105549 | 65101006 | ID=Msa1302530-mRNA-1;Parent=Msa1302530;Name=Msa1302530-mRNA-1;_AED=0.05;_eAED=0.05;_QI=83|0.66|0.75|1|0.66|1|4|0|538 |
| chr8_3 | exon | 65101006 | 65101532 | 65101006 | ID=Msa1302530-mRNA-1:exon:19721;Parent=Msa1302530-mRNA-1 |
| chr8_3 | exon | 65102180 | 65102657 | 65102180 | ID=Msa1302530-mRNA-1:exon:19722;Parent=Msa1302530-mRNA-1 |
| chr8_3 | exon | 65104473 | 65104516 | 65104473 | ID=Msa1302530-mRNA-1:exon:19723;Parent=Msa1302530-mRNA-1 |
| chr8_3 | exon | 65104899 | 65105549 | 65104899 | ID=Msa1302530-mRNA-1:exon:19724;Parent=Msa1302530-mRNA-1 |
| chr8_3 | five_prime_UTR | 65101006 | 65101088 | 65101006 | ID=Msa1302530-mRNA-1:five_prime_utr;Parent=Msa1302530-mRNA-1 |
| chr8_3 | CDS | 65101089 | 65101532 | 65101089 | ID=Msa1302530-mRNA-1:cds;Parent=Msa1302530-mRNA-1 |
| chr8_3 | CDS | 65102180 | 65102657 | 65102180 | ID=Msa1302530-mRNA-1:cds;Parent=Msa1302530-mRNA-1 |
| chr8_3 | CDS | 65104473 | 65104516 | 65104473 | ID=Msa1302530-mRNA-1:cds;Parent=Msa1302530-mRNA-1 |
| chr8_3 | CDS | 65104899 | 65105549 | 65104899 | ID=Msa1302530-mRNA-1:cds;Parent=Msa1302530-mRNA-1 |
| Gene Sequence |
| Protein sequence |
