Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1263200 | XP_003610532.1 | 98.358 | 548 | 9 | 0 | 1 | 548 | 1 | 548 | 0.0 | 1080 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1263200 | sp|Q8LG88|TDT_ARATH | 65.275 | 527 | 171 | 4 | 19 | 534 | 13 | 538 | 0.0 | 698 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1263200 | G7JLM6 | 98.358 | 548 | 9 | 0 | 1 | 548 | 1 | 548 | 0.0 | 1080 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0746040 | Msa1263200 | 0.954259 | 4.422025e-112 | -8.615850e-47 |
| Msa1263200 | Msa1302530 | 0.952413 | 2.557884e-110 | -8.615850e-47 |
| Msa1223950 | Msa1263200 | 0.978344 | 1.252824e-145 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1263200 | MtrunA17_Chr4g0075801 | 98.358 | 548 | 9 | 0 | 1 | 548 | 1 | 548 | 0.0 | 1080 |
| Msa1263200 | MtrunA17_Chr2g0290091 | 78.435 | 524 | 106 | 3 | 19 | 536 | 6 | 528 | 0.0 | 839 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1263200 | AT5G47560.1 | 65.275 | 527 | 171 | 4 | 19 | 534 | 13 | 538 | 0.0 | 698 |
Find 150 sgRNAs with CRISPR-Local
Find 319 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACCATGTGTTGAAACTTAT+TGG | 0.130022 | 8_2:+66275942 | None:intergenic |
| CTGTTTCTGTTCCCTCTCTT+TGG | 0.149243 | 8_2:-66277063 | Msa1263200:CDS |
| AACAATTTCTATGTTCTTCT+TGG | 0.178098 | 8_2:-66277231 | Msa1263200:CDS |
| TATATTGGGTATCCACATTT+TGG | 0.179838 | 8_2:+66272681 | None:intergenic |
| CTTAGAAGATGCTCCATATT+TGG | 0.182122 | 8_2:-66273848 | Msa1263200:CDS |
| AGTAATATCTACATATATAT+TGG | 0.224636 | 8_2:+66272666 | None:intergenic |
| GAAATTGTTGAGGGTGAAAA+AGG | 0.235232 | 8_2:+66277245 | None:intergenic |
| CGATGTCATTACCCTTGTTT+TGG | 0.238022 | 8_2:-66277001 | Msa1263200:CDS |
| ACTGTGTTCTCCTGTCATTT+TGG | 0.263152 | 8_2:+66277365 | None:intergenic |
| CAGCTCCAAGTAACAAAATT+AGG | 0.271062 | 8_2:+66273938 | None:intergenic |
| AAGTGTCCTTTACTCAAATA+AGG | 0.271792 | 8_2:+66275822 | None:intergenic |
| AAGGATTGCTTTGTGTTCTA+TGG | 0.276478 | 8_2:+66277280 | None:intergenic |
| GTGGTAGAAGTGGGGCCTTC+AGG | 0.287054 | 8_2:+66277304 | None:intergenic |
| GAATCCAGCGCTATTGTTAT+TGG | 0.299822 | 8_2:-66276225 | Msa1263200:CDS |
| GGTCTGCCACTTAAGGTTGC+TGG | 0.310572 | 8_2:-66273577 | Msa1263200:CDS |
| GCAGGAGCAATTGCCAAATA+TGG | 0.317007 | 8_2:+66273835 | None:intergenic |
| GGTGTAAATTTGATATTGAT+TGG | 0.317954 | 8_2:-66275996 | Msa1263200:CDS |
| TGCAGTTGCTGATCATATTA+TGG | 0.334276 | 8_2:-66274345 | Msa1263200:intron |
| AATCCAGCGCTATTGTTATT+GGG | 0.344059 | 8_2:-66276224 | Msa1263200:CDS |
| CAAAGTTGGTCTGCCACTTA+AGG | 0.364039 | 8_2:-66273584 | Msa1263200:CDS |
| CATGCTTGCTGTTATTGCTT+GGG | 0.364876 | 8_2:-66277142 | Msa1263200:CDS |
| CATGCATAGTCCTAGCTATA+TGG | 0.366936 | 8_2:+66273731 | None:intergenic |
| CATGTTACGGCTATTATTGT+TGG | 0.375306 | 8_2:+66277161 | None:intergenic |
| ACTCTTCCTTCAATAACTAT+AGG | 0.381828 | 8_2:+66272532 | None:intergenic |
| AGGATCACAGATGACATTCC+CGG | 0.395895 | 8_2:-66274313 | Msa1263200:CDS |
| GTCTGCCACTTAAGGTTGCT+GGG | 0.407479 | 8_2:-66273576 | Msa1263200:CDS |
| ATGTTGATGCCGGTGGCCAC+AGG | 0.409144 | 8_2:-66276143 | Msa1263200:CDS |
| GTAATATCTACATATATATT+GGG | 0.412393 | 8_2:+66272667 | None:intergenic |
| TAACAAAGAGACAGATGAAA+AGG | 0.414164 | 8_2:+66277196 | None:intergenic |
| AGAGGACACATAGAAGTAAC+AGG | 0.416408 | 8_2:+66277084 | None:intergenic |
| GAGAAGAAGAATGATTGTTA+AGG | 0.419127 | 8_2:+66277426 | None:intergenic |
| GTGGTTTATGCCGTGCCAAT+TGG | 0.419394 | 8_2:-66276044 | Msa1263200:CDS |
| GCCACCACCGTCGGAGCAAT+CGG | 0.421873 | 8_2:-66276105 | Msa1263200:CDS |
| CATGTCTTTCGCAGAGAAAA+TGG | 0.422210 | 8_2:-66274496 | Msa1263200:CDS |
| ACATGCTTGCTGTTATTGCT+TGG | 0.432445 | 8_2:-66277143 | Msa1263200:CDS |
| AATTCAGTTGCAATTGCTCC+TGG | 0.435589 | 8_2:+66273685 | None:intergenic |
| CATTTATGATTGAAAATTTG+AGG | 0.439221 | 8_2:-66272728 | Msa1263200:three_prime_UTR |
| ATGTTACGGCTATTATTGTT+GGG | 0.445722 | 8_2:+66277162 | None:intergenic |
| CTTCAGGTTGAGGTTGATGT+TGG | 0.451414 | 8_2:+66277320 | None:intergenic |
| CTCTCTCCTTATTTGAGTAA+AGG | 0.456416 | 8_2:-66275828 | Msa1263200:CDS |
| TTCCATGGCCTTGTTGGTGA+TGG | 0.468327 | 8_2:-66274277 | Msa1263200:CDS |
| ATGTGGAAGAGTCTTGTTCC+TGG | 0.468609 | 8_2:-66275972 | Msa1263200:CDS |
| GAAGTGGGGCCTTCAGGTTG+AGG | 0.470925 | 8_2:+66277310 | None:intergenic |
| GTTTATGCCGTGCCAATTGG+AGG | 0.471732 | 8_2:-66276041 | Msa1263200:CDS |
| ATATTACTAGGCAAAGGAGG+AGG | 0.478334 | 8_2:-66272651 | Msa1263200:three_prime_UTR |
| TACCGTTGCTCATTCTTACA+TGG | 0.479194 | 8_2:-66277025 | Msa1263200:CDS |
| ACAAGAGGGTGAGAAGCTAA+TGG | 0.479870 | 8_2:-66273992 | Msa1263200:CDS |
| CTGCTTGATTTACCTAAGGA+AGG | 0.481460 | 8_2:-66275865 | Msa1263200:CDS |
| GCAAATAATTTACCTAGAGA+TGG | 0.484625 | 8_2:+66273529 | None:intergenic |
| AAAGTACTCATCCCTCCAAT+TGG | 0.484679 | 8_2:+66276029 | None:intergenic |
| TCCGATTGCTCCGACGGTGG+TGG | 0.485794 | 8_2:+66276104 | None:intergenic |
| CAATAACAGCAAGCATGTTA+CGG | 0.494684 | 8_2:+66277148 | None:intergenic |
| TCAACTCCCTCAAATGTAGT+TGG | 0.495120 | 8_2:-66273643 | Msa1263200:CDS |
| TTCTCTGCTTGATTTACCTA+AGG | 0.497551 | 8_2:-66275869 | Msa1263200:CDS |
| AACTCCGATTGCTCCGACGG+TGG | 0.499273 | 8_2:+66276101 | None:intergenic |
| ACAAACCGTAAAACATAGAA+AGG | 0.503797 | 8_2:+66272457 | None:intergenic |
| AGCAAAACCAACTACATTTG+AGG | 0.505018 | 8_2:+66273636 | None:intergenic |
| GAGGTTGATGTTGGATTCAT+CGG | 0.508040 | 8_2:+66277329 | None:intergenic |
| TATTACTAGGCAAAGGAGGA+GGG | 0.510489 | 8_2:-66272650 | Msa1263200:three_prime_UTR |
| CACATAGAAGTAACAGGAAG+TGG | 0.512441 | 8_2:+66277090 | None:intergenic |
| ATTCAAGATACGCTCAAAGT+TGG | 0.514187 | 8_2:-66273598 | Msa1263200:CDS |
| ATATATATGTAGATATTACT+AGG | 0.515056 | 8_2:-66272663 | Msa1263200:three_prime_UTR |
| CTACAACGTTCACAGAAGAT+TGG | 0.516743 | 8_2:-66276947 | Msa1263200:CDS |
| ACCAACTCCGATTGCTCCGA+CGG | 0.521741 | 8_2:+66276098 | None:intergenic |
| GCAAAACCAACTACATTTGA+GGG | 0.523385 | 8_2:+66273637 | None:intergenic |
| TGTAACAGCCCTGTGGCCAC+CGG | 0.524138 | 8_2:+66276134 | None:intergenic |
| GGAGGGATGAGTACTTTGAC+AGG | 0.524697 | 8_2:-66276023 | Msa1263200:CDS |
| GCTATCCCAGCAACCTTAAG+TGG | 0.526924 | 8_2:+66273571 | None:intergenic |
| CCTCTTCTTCTTATGATCCC+AGG | 0.527608 | 8_2:-66273703 | Msa1263200:CDS |
| AACAATAGCGCTGGATTCAA+CGG | 0.528207 | 8_2:+66276230 | None:intergenic |
| AGTAACAAAATTAGGTTCCA+AGG | 0.528587 | 8_2:+66273946 | None:intergenic |
| CACAGATGACATTCCCGGAT+GGG | 0.530635 | 8_2:-66274308 | Msa1263200:CDS |
| CCCTAGCTGAGCCCTTCCTT+AGG | 0.531630 | 8_2:+66275853 | None:intergenic |
| ATGAGTACTTTGACAGGGAC+AGG | 0.531696 | 8_2:-66276017 | Msa1263200:CDS |
| TTCTATGGAGTGGTAGAAGT+GGG | 0.531994 | 8_2:+66277295 | None:intergenic |
| ACCTAAGGAAGGGCTCAGCT+AGG | 0.534237 | 8_2:-66275854 | Msa1263200:CDS |
| TTCCATCACCAACAAGGCCA+TGG | 0.535039 | 8_2:+66274275 | None:intergenic |
| TTACTAGGCAAAGGAGGAGG+GGG | 0.535083 | 8_2:-66272648 | Msa1263200:three_prime_UTR |
| AGCTGCCGTGATGTTGATGC+CGG | 0.539745 | 8_2:-66276153 | Msa1263200:CDS |
| TCATATTATGGATGACAAGA+AGG | 0.542160 | 8_2:-66274333 | Msa1263200:CDS |
| TGGCCACAGGGCTGTTACAG+CGG | 0.542397 | 8_2:-66276130 | Msa1263200:CDS |
| AGGGTGAGAAGCTAATGGAT+TGG | 0.543793 | 8_2:-66273987 | Msa1263200:CDS |
| CAGTAGAGCGGTGGTTCTAA+CGG | 0.547575 | 8_2:-66276066 | Msa1263200:CDS |
| AAGAACATAGAAATTGTTGA+GGG | 0.551725 | 8_2:+66277236 | None:intergenic |
| GAATGAAACTTCCCAAAACA+AGG | 0.552593 | 8_2:+66276989 | None:intergenic |
| TTGGAACAAATGGTGTCCAA+TGG | 0.555718 | 8_2:-66272833 | Msa1263200:CDS |
| AACAAAGAGACAGATGAAAA+GGG | 0.558930 | 8_2:+66277197 | None:intergenic |
| ATGAATGCAAGAAATTACCT+TGG | 0.560679 | 8_2:-66273963 | Msa1263200:CDS |
| TGTTGATGCCGGTGGCCACA+GGG | 0.561507 | 8_2:-66276142 | Msa1263200:CDS |
| AGACCCAATAACAATAGCGC+TGG | 0.562343 | 8_2:+66276221 | None:intergenic |
| AATATTAAAACTTACGGTCA+AGG | 0.563166 | 8_2:+66276924 | None:intergenic |
| ATTACTAGGCAAAGGAGGAG+GGG | 0.565907 | 8_2:-66272649 | Msa1263200:three_prime_UTR |
| TGCTTGATTTACCTAAGGAA+GGG | 0.566581 | 8_2:-66275864 | Msa1263200:CDS |
| ATTTGATATTGATTGGAATG+TGG | 0.568501 | 8_2:-66275989 | Msa1263200:CDS |
| ATTCAGTTGCAATTGCTCCT+GGG | 0.570116 | 8_2:+66273686 | None:intergenic |
| CAGATGAAAAGGGACAATAA+AGG | 0.573040 | 8_2:+66277207 | None:intergenic |
| AAGAGGGAATTAGAAGCTCT+AGG | 0.573141 | 8_2:-66275798 | Msa1263200:intron |
| CGTCATTCTTTGTGAGCATG+TGG | 0.577614 | 8_2:-66276190 | Msa1263200:CDS |
| GTGAACGTTGTAGCGTTCAA+CGG | 0.578386 | 8_2:+66276957 | None:intergenic |
| GCTGATGGAGTTCAATCTAG+TGG | 0.579028 | 8_2:-66273904 | Msa1263200:CDS |
| CTAGCTATATGGTATAGAAG+TGG | 0.579893 | 8_2:+66273742 | None:intergenic |
| ACAGATGACATTCCCGGATG+GGG | 0.580025 | 8_2:-66274307 | Msa1263200:CDS |
| AGGTGACATCAGTGTTCTGT+GGG | 0.581688 | 8_2:-66276256 | Msa1263200:CDS |
| CCTAAGGAAGGGCTCAGCTA+GGG | 0.582022 | 8_2:-66275853 | Msa1263200:CDS |
| CAGAAGCAATTCCAAAGAGA+GGG | 0.586284 | 8_2:+66277052 | None:intergenic |
| GAAGAACATAGAAATTGTTG+AGG | 0.589403 | 8_2:+66277235 | None:intergenic |
| TTTGATAATATAGGTTATGG+TGG | 0.589723 | 8_2:-66274046 | Msa1263200:intron |
| CCTGGGATCATAAGAAGAAG+AGG | 0.590839 | 8_2:+66273703 | None:intergenic |
| AACAGGAAGTGGTAAAGCAG+AGG | 0.593621 | 8_2:+66277101 | None:intergenic |
| AACCAATAAGTTTCAACACA+TGG | 0.595683 | 8_2:-66275944 | Msa1263200:CDS |
| ACCGTCGGAGCAATCGGAGT+TGG | 0.598580 | 8_2:-66276099 | Msa1263200:CDS |
| AATACCAAACAGAAAACAAG+AGG | 0.598893 | 8_2:-66274007 | Msa1263200:CDS |
| GCAGAAGCAATTCCAAAGAG+AGG | 0.598997 | 8_2:+66277051 | None:intergenic |
| CACTTCTATACCATATAGCT+AGG | 0.599715 | 8_2:-66273741 | Msa1263200:CDS |
| ACAGCGGCTGCCACCACCGT+CGG | 0.600123 | 8_2:-66276114 | Msa1263200:CDS |
| TAGCTATATGGTATAGAAGT+GGG | 0.604156 | 8_2:+66273743 | None:intergenic |
| GAGTAAAGGACACTTGAAGA+GGG | 0.605380 | 8_2:-66275814 | Msa1263200:CDS |
| TGAGTAAAGGACACTTGAAG+AGG | 0.607837 | 8_2:-66275815 | Msa1263200:CDS |
| TGCCGTGATGTTGATGCCGG+TGG | 0.610921 | 8_2:-66276150 | Msa1263200:CDS |
| TTGCTTTGTGTTCTATGGAG+TGG | 0.611142 | 8_2:+66277285 | None:intergenic |
| AAGGTGACATCAGTGTTCTG+TGG | 0.613487 | 8_2:-66276257 | Msa1263200:CDS |
| CAACATCAACCTCAACCTGA+AGG | 0.615326 | 8_2:-66277319 | Msa1263200:CDS |
| TGGGATAATAAGTGTAGCAG+TGG | 0.618230 | 8_2:+66273762 | None:intergenic |
| TAGATATTACTAGGCAAAGG+AGG | 0.621362 | 8_2:-66272654 | Msa1263200:three_prime_UTR |
| ATGTAGATATTACTAGGCAA+AGG | 0.622181 | 8_2:-66272657 | Msa1263200:three_prime_UTR |
| TCACAGATGACATTCCCGGA+TGG | 0.624095 | 8_2:-66274309 | Msa1263200:CDS |
| CTACTTATAAGACTAACTGC+AGG | 0.624428 | 8_2:+66273817 | None:intergenic |
| AAGAGAGGGAACAGAAACAG+AGG | 0.638570 | 8_2:+66277066 | None:intergenic |
| AGAAATCAATTTGTCAACCA+CGG | 0.638750 | 8_2:+66272792 | None:intergenic |
| TTTATGCCGTGCCAATTGGA+GGG | 0.639992 | 8_2:-66276040 | Msa1263200:CDS |
| CAGCCGCTGTAACAGCCCTG+TGG | 0.640090 | 8_2:+66276127 | None:intergenic |
| TGATTGTTAAGGTTGAGTGT+TGG | 0.642833 | 8_2:+66277437 | None:intergenic |
| GTTCTATGGAGTGGTAGAAG+TGG | 0.645537 | 8_2:+66277294 | None:intergenic |
| ACTCATCCCTCCAATTGGCA+CGG | 0.646058 | 8_2:+66276034 | None:intergenic |
| GGCCACCGGCATCAACATCA+CGG | 0.647085 | 8_2:+66276148 | None:intergenic |
| TAGAGCGGTGGTTCTAACGG+TGG | 0.651368 | 8_2:-66276063 | Msa1263200:CDS |
| GAATAAGTTCAGTAGAGCGG+TGG | 0.658888 | 8_2:-66276075 | Msa1263200:CDS |
| TCTATGGAGTGGTAGAAGTG+GGG | 0.659872 | 8_2:+66277296 | None:intergenic |
| TGACACTTCCATCACCAACA+AGG | 0.662968 | 8_2:+66274269 | None:intergenic |
| CCGTAAAACATAGAAAGGCA+CGG | 0.672086 | 8_2:+66272462 | None:intergenic |
| AATGAAACTTCCCAAAACAA+GGG | 0.680887 | 8_2:+66276990 | None:intergenic |
| ACATTTGAGGGAGTTGACGT+AGG | 0.681693 | 8_2:+66273649 | None:intergenic |
| GAGGGATGAGTACTTTGACA+GGG | 0.684482 | 8_2:-66276022 | Msa1263200:CDS |
| GTCCATGTAAGAATGAGCAA+CGG | 0.693112 | 8_2:+66277023 | None:intergenic |
| CATGCTCACAAAGAATGACG+TGG | 0.694517 | 8_2:+66276193 | None:intergenic |
| GGTGAATAAGTTCAGTAGAG+CGG | 0.695026 | 8_2:-66276078 | Msa1263200:CDS |
| TGCCAAACAAAATCTCTCCG+TGG | 0.711262 | 8_2:-66272809 | Msa1263200:CDS |
| ATACCAAACAGAAAACAAGA+GGG | 0.731604 | 8_2:-66274006 | Msa1263200:CDS |
| GAGCATGTGGATGCACAACG+TGG | 0.798016 | 8_2:-66276177 | Msa1263200:CDS |
| GGTGACATCAGTGTTCTGTG+GGG | 0.814024 | 8_2:-66276255 | Msa1263200:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CAATAATTTAACTTTAAAAT+GGG | + | chr8_2:66274611-66274630 | None:intergenic | 10.0% |
| !!! | TCAATAATTTAACTTTAAAA+TGG | + | chr8_2:66274612-66274631 | None:intergenic | 10.0% |
| !! | TAGAGAAATATTAAAACTTA+CGG | + | chr8_2:66272936-66272955 | None:intergenic | 15.0% |
| !! | ATCAATAAATAAAATTTCGA+CGG | + | chr8_2:66273043-66273062 | None:intergenic | 15.0% |
| !!! | TCATTCATATATAATTTTCT+TGG | + | chr8_2:66273363-66273382 | None:intergenic | 15.0% |
| !!! | TATATTTTTGAATGATTAGA+AGG | - | chr8_2:66273448-66273467 | Msa1263200:intron | 15.0% |
| !!! | TTATCTTTATATGACTTTTA+TGG | - | chr8_2:66274179-66274198 | Msa1263200:intron | 15.0% |
| !! | TGATAAAAAAATATAGTCAA+TGG | + | chr8_2:66274676-66274695 | None:intergenic | 15.0% |
| !! | ATTAAAATTTAACTATGCTT+AGG | + | chr8_2:66274768-66274787 | None:intergenic | 15.0% |
| !!! | GATTTTTTGACAAAAAAAAT+TGG | + | chr8_2:66275170-66275189 | None:intergenic | 15.0% |
| !!! | TTTTTAAAAAGTTGTAATGT+TGG | + | chr8_2:66275272-66275291 | None:intergenic | 15.0% |
| !!! | TTTATTGATAATTCTGTAAT+TGG | - | chr8_2:66275318-66275337 | Msa1263200:intron | 15.0% |
| !!! | TTTGTCATTTTTGATAATAT+AGG | - | chr8_2:66275796-66275815 | Msa1263200:intron | 15.0% |
| !!! | ATTTTTGATAATATAGGTTA+TGG | - | chr8_2:66275802-66275821 | Msa1263200:CDS | 15.0% |
| !!! | TTGATATTTCTAATTAAACT+AGG | + | chr8_2:66276518-66276537 | None:intergenic | 15.0% |
| !!! | ATTTTACTTGAATTTGAATT+TGG | - | chr8_2:66276585-66276604 | Msa1263200:intron | 15.0% |
| !!! | TTTTACTTGAATTTGAATTT+GGG | - | chr8_2:66276586-66276605 | Msa1263200:intron | 15.0% |
| !! | GTAATATCTACATATATATT+GGG | + | chr8_2:66277187-66277206 | None:intergenic | 15.0% |
| !! | AGTAATATCTACATATATAT+TGG | + | chr8_2:66277188-66277207 | None:intergenic | 15.0% |
| !! | ATATATATGTAGATATTACT+AGG | - | chr8_2:66277188-66277207 | Msa1263200:CDS | 15.0% |
| !! | CAAAAATCAATATTATTACA+AGG | + | chr8_2:66277425-66277444 | None:intergenic | 15.0% |
| !! | TCAATAAATAAAATTTCGAC+GGG | + | chr8_2:66273042-66273061 | None:intergenic | 20.0% |
| !! | TTTATTGATATGAAATCGTT+TGG | - | chr8_2:66273054-66273073 | Msa1263200:intron | 20.0% |
| !! | TGAATACTTGATTAAAAGTT+TGG | + | chr8_2:66273102-66273121 | None:intergenic | 20.0% |
| !!! | ATTTTTAACCTCTCTATTAT+TGG | - | chr8_2:66273130-66273149 | Msa1263200:intron | 20.0% |
| !! | TTATTGGATATGAAGAATTA+TGG | - | chr8_2:66273146-66273165 | Msa1263200:intron | 20.0% |
| !!! | TTGTTTTTCTTATATGCTTT+TGG | - | chr8_2:66273955-66273974 | Msa1263200:CDS | 20.0% |
| !! | CTAAAAACATGACTAATATA+TGG | - | chr8_2:66274802-66274821 | Msa1263200:intron | 20.0% |
| !!! | AAGAGTAGATTTTAGAATAT+TGG | + | chr8_2:66274858-66274877 | None:intergenic | 20.0% |
| !!! | CCCATTTTTTTATACAATTT+GGG | + | chr8_2:66276675-66276694 | None:intergenic | 20.0% |
| !! | CCCAAATTGTATAAAAAAAT+GGG | - | chr8_2:66276672-66276691 | Msa1263200:intron | 20.0% |
| !!! | ACCCATTTTTTTATACAATT+TGG | + | chr8_2:66276676-66276695 | None:intergenic | 20.0% |
| !!! | TTCAATACTCACTTTTTTTT+AGG | + | chr8_2:66276868-66276887 | None:intergenic | 20.0% |
| !! | AAAAATTTGACTCAAAAGTA+TGG | + | chr8_2:66276911-66276930 | None:intergenic | 20.0% |
| !! | CATTTATGATTGAAAATTTG+AGG | - | chr8_2:66277123-66277142 | Msa1263200:CDS | 20.0% |
| ! | TTGGATAGAAAAAAGGAATT+GGG | + | chr8_2:66272470-66272489 | None:intergenic | 25.0% |
| ! | TTTGGATAGAAAAAAGGAAT+TGG | + | chr8_2:66272471-66272490 | None:intergenic | 25.0% |
| !!! | TGTCATTTTGGATAGAAAAA+AGG | + | chr8_2:66272477-66272496 | None:intergenic | 25.0% |
| !!! | TTTTTTCTATCCAAAATGAC+AGG | - | chr8_2:66272476-66272495 | Msa1263200:three_prime_UTR | 25.0% |
| ! | AAGAACATAGAAATTGTTGA+GGG | + | chr8_2:66272618-66272637 | None:intergenic | 25.0% |
| ! | AACAATTTCTATGTTCTTCT+TGG | - | chr8_2:66272620-66272639 | Msa1263200:three_prime_UTR | 25.0% |
| ! | AATATTAAAACTTACGGTCA+AGG | + | chr8_2:66272930-66272949 | None:intergenic | 25.0% |
| ! | TATGAAGAATTATGGAATGT+TGG | - | chr8_2:66273154-66273173 | Msa1263200:intron | 25.0% |
| ! | AAAAGACCAAAAACTCAATT+CGG | + | chr8_2:66273386-66273405 | None:intergenic | 25.0% |
| !!! | TTTTTTTTATCCATTGATCG+TGG | - | chr8_2:66273403-66273422 | Msa1263200:intron | 25.0% |
| !!! | CAGAGTTTATTTATTTTGTG+AGG | - | chr8_2:66273472-66273491 | Msa1263200:intron | 25.0% |
| !!! | AGTTTATTTATTTTGTGAGG+TGG | - | chr8_2:66273475-66273494 | Msa1263200:intron | 25.0% |
| !!! | GTTTATTTATTTTGTGAGGT+GGG | - | chr8_2:66273476-66273495 | Msa1263200:intron | 25.0% |
| ! | AAATGATATATATTTCCGAC+CGG | - | chr8_2:66273537-66273556 | Msa1263200:intron | 25.0% |
| ! | GGTGTAAATTTGATATTGAT+TGG | - | chr8_2:66273855-66273874 | Msa1263200:CDS | 25.0% |
| !! | ATTTGATATTGATTGGAATG+TGG | - | chr8_2:66273862-66273881 | Msa1263200:CDS | 25.0% |
| !!! | TATCCTTCTTTTTCACATTA+TGG | - | chr8_2:66274102-66274121 | Msa1263200:intron | 25.0% |
| !!! | ATCCTTCTTTTTCACATTAT+GGG | - | chr8_2:66274103-66274122 | Msa1263200:intron | 25.0% |
| ! | AAGTTAAGTTCATTTGATCA+TGG | + | chr8_2:66274245-66274264 | None:intergenic | 25.0% |
| ! | GTGGCAATAAATCAATAATA+AGG | + | chr8_2:66274481-66274500 | None:intergenic | 25.0% |
| !!! | ATTATTGATTTATTGCCACA+TGG | - | chr8_2:66274482-66274501 | Msa1263200:CDS | 25.0% |
| !!! | ACTTTAAAATGGGAACAAAT+GGG | + | chr8_2:66274601-66274620 | None:intergenic | 25.0% |
| !!! | AACTTTAAAATGGGAACAAA+TGG | + | chr8_2:66274602-66274621 | None:intergenic | 25.0% |
| ! | AGATAGATTTACTCATTTAC+AGG | + | chr8_2:66274734-66274753 | None:intergenic | 25.0% |
| ! | AAGAAAAGAAACAAAAGAAG+TGG | - | chr8_2:66274943-66274962 | Msa1263200:intron | 25.0% |
| ! | ACAATGAATACAATCTATCT+TGG | - | chr8_2:66275035-66275054 | Msa1263200:intron | 25.0% |
| ! | ATTGCAACAAGAACAAAATT+AGG | + | chr8_2:66275111-66275130 | None:intergenic | 25.0% |
| ! | AATATTTCATCAAACTCATG+TGG | - | chr8_2:66275133-66275152 | Msa1263200:intron | 25.0% |
| !! | TGACAAAAAAAATTGGTAAC+AGG | + | chr8_2:66275163-66275182 | None:intergenic | 25.0% |
| ! | GCTTCATTATCAATGTATTT+AGG | + | chr8_2:66275295-66275314 | None:intergenic | 25.0% |
| ! | TACTGCTTTAATTAATACGT+TGG | + | chr8_2:66275476-66275495 | None:intergenic | 25.0% |
| ! | AATTGATTGTTCACTATGAT+TGG | + | chr8_2:66275772-66275791 | None:intergenic | 25.0% |
| !! | TTTGATAATATAGGTTATGG+TGG | - | chr8_2:66275805-66275824 | Msa1263200:CDS | 25.0% |
| ! | CTATTAAGAACTTAACAAAG+TGG | - | chr8_2:66276481-66276500 | Msa1263200:intron | 25.0% |
| ! | GCCCAAATTGTATAAAAAAA+TGG | - | chr8_2:66276671-66276690 | Msa1263200:intron | 25.0% |
| !!! | CAATGCAAAGTTTCTTTTTT+TGG | + | chr8_2:66276737-66276756 | None:intergenic | 25.0% |
| ! | CAAAAAAAGAAACTTTGCAT+TGG | - | chr8_2:66276735-66276754 | Msa1263200:intron | 25.0% |
| ! | AAATGTTAACTTATGTCCTA+AGG | + | chr8_2:66276844-66276863 | None:intergenic | 25.0% |
| ! | AAAATCACTCTGATTGAAAA+AGG | - | chr8_2:66276954-66276973 | Msa1263200:CDS | 25.0% |
| !!! | CAAAAATTTATAAAGCATCG+TGG | + | chr8_2:66277099-66277118 | None:intergenic | 25.0% |
| !! | CACGATGCTTTATAAATTTT+TGG | - | chr8_2:66277097-66277116 | Msa1263200:CDS | 25.0% |
| !! | TGTTTTCCTATAGTTATTGA+AGG | - | chr8_2:66277313-66277332 | Msa1263200:CDS | 25.0% |
| !!! | TGATTGTGTGTTTCTTTTTT+CGG | - | chr8_2:66277341-66277360 | Msa1263200:CDS | 25.0% |
| GAGAAGAAGAATGATTGTTA+AGG | + | chr8_2:66272428-66272447 | None:intergenic | 30.0% | |
| TAGAAAAAAGGAATTGGGTA+AGG | + | chr8_2:66272465-66272484 | None:intergenic | 30.0% | |
| ! | AAAAAGGATTTGAAGCTGAA+AGG | + | chr8_2:66272593-66272612 | None:intergenic | 30.0% |
| GAAGAACATAGAAATTGTTG+AGG | + | chr8_2:66272619-66272638 | None:intergenic | 30.0% | |
| AACAAAGAGACAGATGAAAA+GGG | + | chr8_2:66272657-66272676 | None:intergenic | 30.0% | |
| TAACAAAGAGACAGATGAAA+AGG | + | chr8_2:66272658-66272677 | None:intergenic | 30.0% | |
| ATGTTACGGCTATTATTGTT+GGG | + | chr8_2:66272692-66272711 | None:intergenic | 30.0% | |
| AATGAAACTTCCCAAAACAA+GGG | + | chr8_2:66272864-66272883 | None:intergenic | 30.0% | |
| TTGATATGAAATCGTTTGGT+CGG | - | chr8_2:66273058-66273077 | Msa1263200:intron | 30.0% | |
| CTTCATATCCAATAATAGAG+AGG | + | chr8_2:66273141-66273160 | None:intergenic | 30.0% | |
| ATTGAGTCGTAAGAAAATTG+TGG | + | chr8_2:66273212-66273231 | None:intergenic | 30.0% | |
| ! | TAGACTTATTGATTGCTTGT+CGG | - | chr8_2:66273296-66273315 | Msa1263200:intron | 30.0% |
| AATGATATATATTTCCGACC+GGG | - | chr8_2:66273538-66273557 | Msa1263200:intron | 30.0% | |
| GTGAATGATATGATGTTTGA+AGG | - | chr8_2:66273575-66273594 | Msa1263200:CDS | 30.0% | |
| AACCAATAAGTTTCAACACA+TGG | - | chr8_2:66273907-66273926 | Msa1263200:CDS | 30.0% | |
| AACCATGTGTTGAAACTTAT+TGG | + | chr8_2:66273912-66273931 | None:intergenic | 30.0% | |
| ATAAGAAAAACAATCGCTAC+CGG | + | chr8_2:66273948-66273967 | None:intergenic | 30.0% | |
| AAGTGTCCTTTACTCAAATA+AGG | + | chr8_2:66274032-66274051 | None:intergenic | 30.0% | |
| TTCCCATAATGTGAAAAAGA+AGG | + | chr8_2:66274108-66274127 | None:intergenic | 30.0% | |
| GTTATCTTTGTGATGAATAG+AGG | - | chr8_2:66274443-66274462 | Msa1263200:intron | 30.0% | |
| !! | CTTTAAAATGGGAACAAATG+GGG | + | chr8_2:66274600-66274619 | None:intergenic | 30.0% |
| ATTAACCAAATCATATGGCA+GGG | + | chr8_2:66274913-66274932 | None:intergenic | 30.0% | |
| AATTAACCAAATCATATGGC+AGG | + | chr8_2:66274914-66274933 | None:intergenic | 30.0% | |
| GCACAATTAACCAAATCATA+TGG | + | chr8_2:66274918-66274937 | None:intergenic | 30.0% | |
| ATGCAGTTAGCAATTTCAAT+GGG | + | chr8_2:66275008-66275027 | None:intergenic | 30.0% | |
| AAAAGTTGTAATGTTGGTCA+AGG | + | chr8_2:66275266-66275285 | None:intergenic | 30.0% | |
| !!! | TTCTGTAATTGGTTTTTTGC+AGG | - | chr8_2:66275329-66275348 | Msa1263200:intron | 30.0% |
| !!! | AAAATGGTGCTATCTGTTTT+TGG | - | chr8_2:66275371-66275390 | Msa1263200:intron | 30.0% |
| !!! | AAATGGTGCTATCTGTTTTT+GGG | - | chr8_2:66275372-66275391 | Msa1263200:intron | 30.0% |
| TCATATTATGGATGACAAGA+AGG | - | chr8_2:66275518-66275537 | Msa1263200:intron | 30.0% | |
| ACATGACACTAACATGATAT+TGG | + | chr8_2:66275713-66275732 | None:intergenic | 30.0% | |
| AATACCAAACAGAAAACAAG+AGG | - | chr8_2:66275844-66275863 | Msa1263200:CDS | 30.0% | |
| ATACCAAACAGAAAACAAGA+GGG | - | chr8_2:66275845-66275864 | Msa1263200:CDS | 30.0% | |
| ATGAATGCAAGAAATTACCT+TGG | - | chr8_2:66275888-66275907 | Msa1263200:CDS | 30.0% | |
| AGTAACAAAATTAGGTTCCA+AGG | + | chr8_2:66275908-66275927 | None:intergenic | 30.0% | |
| ! | TGGAACCTAATTTTGTTACT+TGG | - | chr8_2:66275908-66275927 | Msa1263200:CDS | 30.0% |
| TAGCTATATGGTATAGAAGT+GGG | + | chr8_2:66276111-66276130 | None:intergenic | 30.0% | |
| GCAAATAATTTACCTAGAGA+TGG | + | chr8_2:66276325-66276344 | None:intergenic | 30.0% | |
| ATTGTGTGTCTGAATTTCAT+TGG | - | chr8_2:66276617-66276636 | Msa1263200:intron | 30.0% | |
| CTTCTATAACTCACTTGTAA+GGG | + | chr8_2:66276650-66276669 | None:intergenic | 30.0% | |
| ACTTCTATAACTCACTTGTA+AGG | + | chr8_2:66276651-66276670 | None:intergenic | 30.0% | |
| !!! | GCTTTTGTTTTTGGAACAAA+TGG | - | chr8_2:66277008-66277027 | Msa1263200:CDS | 30.0% |
| AGAAATCAATTTGTCAACCA+CGG | + | chr8_2:66277062-66277081 | None:intergenic | 30.0% | |
| !!! | TTTTGGTTTTTGAGGTAAGA+AGG | + | chr8_2:66277156-66277175 | None:intergenic | 30.0% |
| TTACCTCAAAAACCAAAATG+TGG | - | chr8_2:66277158-66277177 | Msa1263200:CDS | 30.0% | |
| !!! | TATCCACATTTTGGTTTTTG+AGG | + | chr8_2:66277164-66277183 | None:intergenic | 30.0% |
| ! | TATATTGGGTATCCACATTT+TGG | + | chr8_2:66277173-66277192 | None:intergenic | 30.0% |
| ATGTAGATATTACTAGGCAA+AGG | - | chr8_2:66277194-66277213 | Msa1263200:CDS | 30.0% | |
| ACTCTTCCTTCAATAACTAT+AGG | + | chr8_2:66277322-66277341 | None:intergenic | 30.0% | |
| !!! | GATTGTGTGTTTCTTTTTTC+GGG | - | chr8_2:66277342-66277361 | Msa1263200:CDS | 30.0% |
| ACAAACCGTAAAACATAGAA+AGG | + | chr8_2:66277397-66277416 | None:intergenic | 30.0% | |
| TGATTGTTAAGGTTGAGTGT+TGG | + | chr8_2:66272417-66272436 | None:intergenic | 35.0% | |
| AAGGATTGCTTTGTGTTCTA+TGG | + | chr8_2:66272574-66272593 | None:intergenic | 35.0% | |
| GAAATTGTTGAGGGTGAAAA+AGG | + | chr8_2:66272609-66272628 | None:intergenic | 35.0% | |
| CAGATGAAAAGGGACAATAA+AGG | + | chr8_2:66272647-66272666 | None:intergenic | 35.0% | |
| CATGTTACGGCTATTATTGT+TGG | + | chr8_2:66272693-66272712 | None:intergenic | 35.0% | |
| CAATAACAGCAAGCATGTTA+CGG | + | chr8_2:66272706-66272725 | None:intergenic | 35.0% | |
| ! | TTATTGCTTGGGTTTTCAGT+TGG | - | chr8_2:66272720-66272739 | Msa1263200:three_prime_UTR | 35.0% |
| !!! | GATGTCATTACCCTTGTTTT+GGG | - | chr8_2:66272851-66272870 | Msa1263200:intron | 35.0% |
| GAATGAAACTTCCCAAAACA+AGG | + | chr8_2:66272865-66272884 | None:intergenic | 35.0% | |
| TATGAACATGAACAACACGA+TGG | - | chr8_2:66273015-66273034 | Msa1263200:intron | 35.0% | |
| ! | GAATGACCGAATTGAGTTTT+TGG | - | chr8_2:66273377-66273396 | Msa1263200:intron | 35.0% |
| ! | TTTTTATCCATTGATCGTGG+AGG | - | chr8_2:66273406-66273425 | Msa1263200:intron | 35.0% |
| ! | TTTTATCCATTGATCGTGGA+GGG | - | chr8_2:66273407-66273426 | Msa1263200:intron | 35.0% |
| ATGATATATATTTCCGACCG+GGG | - | chr8_2:66273539-66273558 | Msa1263200:intron | 35.0% | |
| ! | AATCCAGCGCTATTGTTATT+GGG | - | chr8_2:66273627-66273646 | Msa1263200:CDS | 35.0% |
| !!! | AAACTTATTGGTTTTGCACC+AGG | + | chr8_2:66273900-66273919 | None:intergenic | 35.0% |
| !! | ATGGTTCTTCTTTGCTTTTC+CGG | - | chr8_2:66273926-66273945 | Msa1263200:CDS | 35.0% |
| TTCTCTGCTTGATTTACCTA+AGG | - | chr8_2:66273982-66274001 | Msa1263200:CDS | 35.0% | |
| TGCTTGATTTACCTAAGGAA+GGG | - | chr8_2:66273987-66274006 | Msa1263200:CDS | 35.0% | |
| ! | CTCTCTCCTTATTTGAGTAA+AGG | - | chr8_2:66274023-66274042 | Msa1263200:CDS | 35.0% |
| GTAGATATGATGACTAGATG+TGG | - | chr8_2:66274201-66274220 | Msa1263200:intron | 35.0% | |
| ! | ACTCATTTACAGGTTGAAAC+AGG | + | chr8_2:66274724-66274743 | None:intergenic | 35.0% |
| AGTTCATTTAGCATAGTGTC+CGG | - | chr8_2:66274879-66274898 | Msa1263200:intron | 35.0% | |
| TGCAGTTAGCAATTTCAATG+GGG | + | chr8_2:66275007-66275026 | None:intergenic | 35.0% | |
| CATGCAGTTAGCAATTTCAA+TGG | + | chr8_2:66275009-66275028 | None:intergenic | 35.0% | |
| ! | ATTTTCTCTGCGAAAGACAT+GGG | + | chr8_2:66275356-66275375 | None:intergenic | 35.0% |
| !!! | AATGGTGCTATCTGTTTTTG+GGG | - | chr8_2:66275373-66275392 | Msa1263200:intron | 35.0% |
| TGCAGTTGCTGATCATATTA+TGG | - | chr8_2:66275506-66275525 | Msa1263200:intron | 35.0% | |
| CAGCTCCAAGTAACAAAATT+AGG | + | chr8_2:66275916-66275935 | None:intergenic | 35.0% | |
| !! | CTAATTTTGTTACTTGGAGC+TGG | - | chr8_2:66275914-66275933 | Msa1263200:CDS | 35.0% |
| CTTAGAAGATGCTCCATATT+TGG | - | chr8_2:66276003-66276022 | Msa1263200:CDS | 35.0% | |
| CTACTTATAAGACTAACTGC+AGG | + | chr8_2:66276037-66276056 | None:intergenic | 35.0% | |
| CTAGCTATATGGTATAGAAG+TGG | + | chr8_2:66276112-66276131 | None:intergenic | 35.0% | |
| CACTTCTATACCATATAGCT+AGG | - | chr8_2:66276110-66276129 | Msa1263200:CDS | 35.0% | |
| GCAAAACCAACTACATTTGA+GGG | + | chr8_2:66276217-66276236 | None:intergenic | 35.0% | |
| AGCAAAACCAACTACATTTG+AGG | + | chr8_2:66276218-66276237 | None:intergenic | 35.0% | |
| !!! | AATGTAGTTGGTTTTGCTAC+TGG | - | chr8_2:66276220-66276239 | Msa1263200:CDS | 35.0% |
| ATTCAAGATACGCTCAAAGT+TGG | - | chr8_2:66276253-66276272 | Msa1263200:CDS | 35.0% | |
| ! | TCAGTTTTTATGCCATCTCT+AGG | - | chr8_2:66276310-66276329 | Msa1263200:intron | 35.0% |
| AAATTCAGACACACAATTGC+GGG | + | chr8_2:66276614-66276633 | None:intergenic | 35.0% | |
| GAAATTCAGACACACAATTG+CGG | + | chr8_2:66276615-66276634 | None:intergenic | 35.0% | |
| !! | TCATGTTAATTTGTGCCCTT+AGG | - | chr8_2:66276695-66276714 | Msa1263200:intron | 35.0% |
| !! | CATGTTAATTTGTGCCCTTA+GGG | - | chr8_2:66276696-66276715 | Msa1263200:intron | 35.0% |
| TTCTTTAACATGTGCCCTAA+GGG | + | chr8_2:66276713-66276732 | None:intergenic | 35.0% | |
| ATTCTTTAACATGTGCCCTA+AGG | + | chr8_2:66276714-66276733 | None:intergenic | 35.0% | |
| ! | GGATTCTGATGTCATACTTT+TGG | - | chr8_2:66276975-66276994 | Msa1263200:CDS | 35.0% |
| !! | AGATTTTGTTTGGCATCCAT+TGG | + | chr8_2:66277037-66277056 | None:intergenic | 35.0% |
| TAGATATTACTAGGCAAAGG+AGG | - | chr8_2:66277197-66277216 | Msa1263200:CDS | 35.0% | |
| !! | ACTGTGTTCTCCTGTCATTT+TGG | + | chr8_2:66272489-66272508 | None:intergenic | 40.0% |
| !! | GAGGTTGATGTTGGATTCAT+CGG | + | chr8_2:66272525-66272544 | None:intergenic | 40.0% |
| TTCTATGGAGTGGTAGAAGT+GGG | + | chr8_2:66272559-66272578 | None:intergenic | 40.0% | |
| TTGCTTTGTGTTCTATGGAG+TGG | + | chr8_2:66272569-66272588 | None:intergenic | 40.0% | |
| !! | ACATGCTTGCTGTTATTGCT+TGG | - | chr8_2:66272708-66272727 | Msa1263200:three_prime_UTR | 40.0% |
| !! | CATGCTTGCTGTTATTGCTT+GGG | - | chr8_2:66272709-66272728 | Msa1263200:three_prime_UTR | 40.0% |
| CACATAGAAGTAACAGGAAG+TGG | + | chr8_2:66272764-66272783 | None:intergenic | 40.0% | |
| AGAGGACACATAGAAGTAAC+AGG | + | chr8_2:66272770-66272789 | None:intergenic | 40.0% | |
| CAGAAGCAATTCCAAAGAGA+GGG | + | chr8_2:66272802-66272821 | None:intergenic | 40.0% | |
| TACCGTTGCTCATTCTTACA+TGG | - | chr8_2:66272826-66272845 | Msa1263200:CDS | 40.0% | |
| GTCCATGTAAGAATGAGCAA+CGG | + | chr8_2:66272831-66272850 | None:intergenic | 40.0% | |
| !! | CGATGTCATTACCCTTGTTT+TGG | - | chr8_2:66272850-66272869 | Msa1263200:intron | 40.0% |
| CTACAACGTTCACAGAAGAT+TGG | - | chr8_2:66272904-66272923 | Msa1263200:intron | 40.0% | |
| TCACAACCAATCATAAACCC+CGG | + | chr8_2:66273559-66273578 | None:intergenic | 40.0% | |
| ! | AACAATAGCGCTGGATTCAA+CGG | + | chr8_2:66273624-66273643 | None:intergenic | 40.0% |
| GAATCCAGCGCTATTGTTAT+TGG | - | chr8_2:66273626-66273645 | Msa1263200:CDS | 40.0% | |
| GGTGAATAAGTTCAGTAGAG+CGG | - | chr8_2:66273773-66273792 | Msa1263200:CDS | 40.0% | |
| ! | AAAGTACTCATCCCTCCAAT+TGG | + | chr8_2:66273825-66273844 | None:intergenic | 40.0% |
| CTGCTTGATTTACCTAAGGA+AGG | - | chr8_2:66273986-66274005 | Msa1263200:CDS | 40.0% | |
| TGAGTAAAGGACACTTGAAG+AGG | - | chr8_2:66274036-66274055 | Msa1263200:CDS | 40.0% | |
| GAGTAAAGGACACTTGAAGA+GGG | - | chr8_2:66274037-66274056 | Msa1263200:intron | 40.0% | |
| AAGAGGGAATTAGAAGCTCT+AGG | - | chr8_2:66274053-66274072 | Msa1263200:intron | 40.0% | |
| TAACGACACGTAAGTAGACA+GGG | + | chr8_2:66274427-66274446 | None:intergenic | 40.0% | |
| ATAACGACACGTAAGTAGAC+AGG | + | chr8_2:66274428-66274447 | None:intergenic | 40.0% | |
| ATTTATTGCCACATGGCTCA+TGG | - | chr8_2:66274489-66274508 | Msa1263200:CDS | 40.0% | |
| GATATTATCCATGAGCCATG+TGG | + | chr8_2:66274500-66274519 | None:intergenic | 40.0% | |
| ATGACACATCCACATTGGAA+TGG | + | chr8_2:66274530-66274549 | None:intergenic | 40.0% | |
| TCTGTCTCACTTTCAACCAA+TGG | - | chr8_2:66274549-66274568 | Msa1263200:intron | 40.0% | |
| CACTTTCAACCAATGGTACT+TGG | - | chr8_2:66274556-66274575 | Msa1263200:intron | 40.0% | |
| AATCATATGGCAGGGATAAC+AGG | + | chr8_2:66274905-66274924 | None:intergenic | 40.0% | |
| GTTATCCCTGCCATATGATT+TGG | - | chr8_2:66274905-66274924 | Msa1263200:intron | 40.0% | |
| TGTACCAGACTTGTGTGAAA+TGG | - | chr8_2:66274977-66274996 | Msa1263200:intron | 40.0% | |
| CAATCCATTTCACACAAGTC+TGG | + | chr8_2:66274984-66275003 | None:intergenic | 40.0% | |
| ! | CATTTTCTCTGCGAAAGACA+TGG | + | chr8_2:66275357-66275376 | None:intergenic | 40.0% |
| CATGTCTTTCGCAGAGAAAA+TGG | - | chr8_2:66275355-66275374 | Msa1263200:intron | 40.0% | |
| ATGGAAAAAAGTTCCCCATC+CGG | + | chr8_2:66275560-66275579 | None:intergenic | 40.0% | |
| !!! | ACTTTTTTCCATGGCCTTGT+TGG | - | chr8_2:66275568-66275587 | Msa1263200:intron | 40.0% |
| !!! | TCACCCTCTTGTTTTCTGTT+TGG | + | chr8_2:66275851-66275870 | None:intergenic | 40.0% |
| TGGGATAATAAGTGTAGCAG+TGG | + | chr8_2:66276092-66276111 | None:intergenic | 40.0% | |
| CATGCATAGTCCTAGCTATA+TGG | + | chr8_2:66276123-66276142 | None:intergenic | 40.0% | |
| ATTCAGTTGCAATTGCTCCT+GGG | + | chr8_2:66276168-66276187 | None:intergenic | 40.0% | |
| AATTCAGTTGCAATTGCTCC+TGG | + | chr8_2:66276169-66276188 | None:intergenic | 40.0% | |
| TCAACTCCCTCAAATGTAGT+TGG | - | chr8_2:66276208-66276227 | Msa1263200:CDS | 40.0% | |
| TGGCATAAAAACTGAGAGCA+CGG | + | chr8_2:66276305-66276324 | None:intergenic | 40.0% | |
| TTAACAAAGTGGCGTTCGTA+AGG | - | chr8_2:66276492-66276511 | Msa1263200:intron | 40.0% | |
| GTTCCTTAACATGTGTCCTT+AGG | - | chr8_2:66276825-66276844 | Msa1263200:intron | 40.0% | |
| TGTCCTAAGGACACATGTTA+AGG | + | chr8_2:66276831-66276850 | None:intergenic | 40.0% | |
| !!! | TGTCATACTTTTGGTGTTGC+AGG | - | chr8_2:66276984-66277003 | Msa1263200:CDS | 40.0% |
| !!! | GTTGCAGGTGCTTTTGTTTT+TGG | - | chr8_2:66276999-66277018 | Msa1263200:CDS | 40.0% |
| TTGGAACAAATGGTGTCCAA+TGG | - | chr8_2:66277018-66277037 | Msa1263200:CDS | 40.0% | |
| ! | AACCACGGAGAGATTTTGTT+TGG | + | chr8_2:66277047-66277066 | None:intergenic | 40.0% |
| !!! | GGTTTTTGAGGTAAGAAGGA+AGG | + | chr8_2:66277152-66277171 | None:intergenic | 40.0% |
| ATATTACTAGGCAAAGGAGG+AGG | - | chr8_2:66277200-66277219 | Msa1263200:CDS | 40.0% | |
| TATTACTAGGCAAAGGAGGA+GGG | - | chr8_2:66277201-66277220 | Msa1263200:CDS | 40.0% | |
| CCGTAAAACATAGAAAGGCA+CGG | + | chr8_2:66277392-66277411 | None:intergenic | 40.0% | |
| ! | CCGTGCCTTTCTATGTTTTA+CGG | - | chr8_2:66277389-66277408 | Msa1263200:five_prime_UTR | 40.0% |
| !! | CTTCAGGTTGAGGTTGATGT+TGG | + | chr8_2:66272534-66272553 | None:intergenic | 45.0% |
| CAACATCAACCTCAACCTGA+AGG | - | chr8_2:66272532-66272551 | Msa1263200:three_prime_UTR | 45.0% | |
| TCTATGGAGTGGTAGAAGTG+GGG | + | chr8_2:66272558-66272577 | None:intergenic | 45.0% | |
| GTTCTATGGAGTGGTAGAAG+TGG | + | chr8_2:66272560-66272579 | None:intergenic | 45.0% | |
| ! | TTGCTTGGGTTTTCAGTTGG+TGG | - | chr8_2:66272723-66272742 | Msa1263200:three_prime_UTR | 45.0% |
| ! | TGCTTGGGTTTTCAGTTGGT+GGG | - | chr8_2:66272724-66272743 | Msa1263200:three_prime_UTR | 45.0% |
| AACAGGAAGTGGTAAAGCAG+AGG | + | chr8_2:66272753-66272772 | None:intergenic | 45.0% | |
| AAGAGAGGGAACAGAAACAG+AGG | + | chr8_2:66272788-66272807 | None:intergenic | 45.0% | |
| !! | CTGTTTCTGTTCCCTCTCTT+TGG | - | chr8_2:66272788-66272807 | Msa1263200:exon | 45.0% |
| GCAGAAGCAATTCCAAAGAG+AGG | + | chr8_2:66272803-66272822 | None:intergenic | 45.0% | |
| GTGAACGTTGTAGCGTTCAA+CGG | + | chr8_2:66272897-66272916 | None:intergenic | 45.0% | |
| GTATATCCCTCCACGATCAA+TGG | + | chr8_2:66273416-66273435 | None:intergenic | 45.0% | |
| AACCAATCATAAACCCCGGT+CGG | + | chr8_2:66273555-66273574 | None:intergenic | 45.0% | |
| AAGGTGACATCAGTGTTCTG+TGG | - | chr8_2:66273594-66273613 | Msa1263200:CDS | 45.0% | |
| AGGTGACATCAGTGTTCTGT+GGG | - | chr8_2:66273595-66273614 | Msa1263200:CDS | 45.0% | |
| AGACCCAATAACAATAGCGC+TGG | + | chr8_2:66273633-66273652 | None:intergenic | 45.0% | |
| CATGCTCACAAAGAATGACG+TGG | + | chr8_2:66273661-66273680 | None:intergenic | 45.0% | |
| CGTCATTCTTTGTGAGCATG+TGG | - | chr8_2:66273661-66273680 | Msa1263200:CDS | 45.0% | |
| GAATAAGTTCAGTAGAGCGG+TGG | - | chr8_2:66273776-66273795 | Msa1263200:CDS | 45.0% | |
| TTTATGCCGTGCCAATTGGA+GGG | - | chr8_2:66273811-66273830 | Msa1263200:CDS | 45.0% | |
| GAGGGATGAGTACTTTGACA+GGG | - | chr8_2:66273829-66273848 | Msa1263200:CDS | 45.0% | |
| ATGAGTACTTTGACAGGGAC+AGG | - | chr8_2:66273834-66273853 | Msa1263200:CDS | 45.0% | |
| !! | ATGTGGAAGAGTCTTGTTCC+TGG | - | chr8_2:66273879-66273898 | Msa1263200:CDS | 45.0% |
| GGCTCATGGATAATATCAGC+TGG | - | chr8_2:66274503-66274522 | Msa1263200:CDS | 45.0% | |
| GACAGATGACACATCCACAT+TGG | + | chr8_2:66274535-66274554 | None:intergenic | 45.0% | |
| TTCGTAGGTCCAAGTACCAT+TGG | + | chr8_2:66274568-66274587 | None:intergenic | 45.0% | |
| !! | ATGGGGTCTATTGGTTTCGT+AGG | + | chr8_2:66274583-66274602 | None:intergenic | 45.0% |
| TGGGAACAAATGGGGTCTAT+TGG | + | chr8_2:66274592-66274611 | None:intergenic | 45.0% | |
| AGGATCACAGATGACATTCC+CGG | - | chr8_2:66275538-66275557 | Msa1263200:intron | 45.0% | |
| TGGAAAAAAGTTCCCCATCC+GGG | + | chr8_2:66275559-66275578 | None:intergenic | 45.0% | |
| !!! | GGATGGGGAACTTTTTTCCA+TGG | - | chr8_2:66275559-66275578 | Msa1263200:intron | 45.0% |
| TGACACTTCCATCACCAACA+AGG | + | chr8_2:66275585-66275604 | None:intergenic | 45.0% | |
| ACAAGAGGGTGAGAAGCTAA+TGG | - | chr8_2:66275859-66275878 | Msa1263200:CDS | 45.0% | |
| ! | AGGGTGAGAAGCTAATGGAT+TGG | - | chr8_2:66275864-66275883 | Msa1263200:CDS | 45.0% |
| !!! | GCTGGTTTTGCTTTAGCTGA+TGG | - | chr8_2:66275932-66275951 | Msa1263200:CDS | 45.0% |
| GCTGATGGAGTTCAATCTAG+TGG | - | chr8_2:66275947-66275966 | Msa1263200:CDS | 45.0% | |
| GCAGGAGCAATTGCCAAATA+TGG | + | chr8_2:66276019-66276038 | None:intergenic | 45.0% | |
| CCTGGGATCATAAGAAGAAG+AGG | + | chr8_2:66276151-66276170 | None:intergenic | 45.0% | |
| CCTCTTCTTCTTATGATCCC+AGG | - | chr8_2:66276148-66276167 | Msa1263200:CDS | 45.0% | |
| ACATTTGAGGGAGTTGACGT+AGG | + | chr8_2:66276205-66276224 | None:intergenic | 45.0% | |
| ! | CAAAGTTGGTCTGCCACTTA+AGG | - | chr8_2:66276267-66276286 | Msa1263200:intron | 45.0% |
| TGCCAAACAAAATCTCTCCG+TGG | - | chr8_2:66277042-66277061 | Msa1263200:CDS | 45.0% | |
| ATTACTAGGCAAAGGAGGAG+GGG | - | chr8_2:66277202-66277221 | Msa1263200:CDS | 45.0% | |
| !! | ACTTTAAATTAAAAATTTAA+GGG | + | chr8_2:66276365-66276384 | None:intergenic | 5.0% |
| !! | AACTTTAAATTAAAAATTTA+AGG | + | chr8_2:66276366-66276385 | None:intergenic | 5.0% |
| TTCCGACCGGGGTTTATGAT+TGG | - | chr8_2:66273550-66273569 | Msa1263200:CDS | 50.0% | |
| GGTGACATCAGTGTTCTGTG+GGG | - | chr8_2:66273596-66273615 | Msa1263200:CDS | 50.0% | |
| !! | CAGTAGAGCGGTGGTTCTAA+CGG | - | chr8_2:66273785-66273804 | Msa1263200:CDS | 50.0% |
| GTGGTTTATGCCGTGCCAAT+TGG | - | chr8_2:66273807-66273826 | Msa1263200:CDS | 50.0% | |
| GTTTATGCCGTGCCAATTGG+AGG | - | chr8_2:66273810-66273829 | Msa1263200:CDS | 50.0% | |
| ACTCATCCCTCCAATTGGCA+CGG | + | chr8_2:66273820-66273839 | None:intergenic | 50.0% | |
| GGAGGGATGAGTACTTTGAC+AGG | - | chr8_2:66273828-66273847 | Msa1263200:CDS | 50.0% | |
| TCAGCTGGTCCATTCCAATG+TGG | - | chr8_2:66274518-66274537 | Msa1263200:intron | 50.0% | |
| ATATGGCAGGGATAACAGGC+CGG | + | chr8_2:66274901-66274920 | None:intergenic | 50.0% | |
| TCACAGATGACATTCCCGGA+TGG | - | chr8_2:66275542-66275561 | Msa1263200:intron | 50.0% | |
| CACAGATGACATTCCCGGAT+GGG | - | chr8_2:66275543-66275562 | Msa1263200:intron | 50.0% | |
| ACAGATGACATTCCCGGATG+GGG | - | chr8_2:66275544-66275563 | Msa1263200:intron | 50.0% | |
| !! | TTCCATGGCCTTGTTGGTGA+TGG | - | chr8_2:66275574-66275593 | Msa1263200:intron | 50.0% |
| TTCCATCACCAACAAGGCCA+TGG | + | chr8_2:66275579-66275598 | None:intergenic | 50.0% | |
| GTCCAGATTGAAGTCGTGTC+TGG | - | chr8_2:66275630-66275649 | Msa1263200:intron | 50.0% | |
| CACCAGACACGACTTCAATC+TGG | + | chr8_2:66275635-66275654 | None:intergenic | 50.0% | |
| ! | GTCTGCCACTTAAGGTTGCT+GGG | - | chr8_2:66276275-66276294 | Msa1263200:intron | 50.0% |
| GCTATCCCAGCAACCTTAAG+TGG | + | chr8_2:66276283-66276302 | None:intergenic | 50.0% | |
| TTACTAGGCAAAGGAGGAGG+GGG | - | chr8_2:66277203-66277222 | Msa1263200:CDS | 50.0% | |
| GAGCATGTGGATGCACAACG+TGG | - | chr8_2:66273674-66273693 | Msa1263200:CDS | 55.0% | |
| AGCTGCCGTGATGTTGATGC+CGG | - | chr8_2:66273698-66273717 | Msa1263200:CDS | 55.0% | |
| ACCAACTCCGATTGCTCCGA+CGG | + | chr8_2:66273756-66273775 | None:intergenic | 55.0% | |
| !! | TAGAGCGGTGGTTCTAACGG+TGG | - | chr8_2:66273788-66273807 | Msa1263200:CDS | 55.0% |
| ACCTAAGGAAGGGCTCAGCT+AGG | - | chr8_2:66273997-66274016 | Msa1263200:CDS | 55.0% | |
| CCTAAGGAAGGGCTCAGCTA+GGG | - | chr8_2:66273998-66274017 | Msa1263200:CDS | 55.0% | |
| ! | GGTCTGCCACTTAAGGTTGC+TGG | - | chr8_2:66276274-66276293 | Msa1263200:intron | 55.0% |
| !! | GAAGTGGGGCCTTCAGGTTG+AGG | + | chr8_2:66272544-66272563 | None:intergenic | 60.0% |
| GTGGTAGAAGTGGGGCCTTC+AGG | + | chr8_2:66272550-66272569 | None:intergenic | 60.0% | |
| TGCCGTGATGTTGATGCCGG+TGG | - | chr8_2:66273701-66273720 | Msa1263200:CDS | 60.0% | |
| GGCCACCGGCATCAACATCA+CGG | + | chr8_2:66273706-66273725 | None:intergenic | 60.0% | |
| ATGTTGATGCCGGTGGCCAC+AGG | - | chr8_2:66273708-66273727 | Msa1263200:CDS | 60.0% | |
| TGTTGATGCCGGTGGCCACA+GGG | - | chr8_2:66273709-66273728 | Msa1263200:CDS | 60.0% | |
| TGTAACAGCCCTGTGGCCAC+CGG | + | chr8_2:66273720-66273739 | None:intergenic | 60.0% | |
| TGGCCACAGGGCTGTTACAG+CGG | - | chr8_2:66273721-66273740 | Msa1263200:CDS | 60.0% | |
| AACTCCGATTGCTCCGACGG+TGG | + | chr8_2:66273753-66273772 | None:intergenic | 60.0% | |
| ACCGTCGGAGCAATCGGAGT+TGG | - | chr8_2:66273752-66273771 | Msa1263200:CDS | 60.0% | |
| CCCTAGCTGAGCCCTTCCTT+AGG | + | chr8_2:66274001-66274020 | None:intergenic | 60.0% | |
| CAGCCGCTGTAACAGCCCTG+TGG | + | chr8_2:66273727-66273746 | None:intergenic | 65.0% | |
| GCCACCACCGTCGGAGCAAT+CGG | - | chr8_2:66273746-66273765 | Msa1263200:CDS | 65.0% | |
| TCCGATTGCTCCGACGGTGG+TGG | + | chr8_2:66273750-66273769 | None:intergenic | 65.0% | |
| ACAGCGGCTGCCACCACCGT+CGG | - | chr8_2:66273737-66273756 | Msa1263200:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 66272408 | 66277465 | 66272408 | ID=Msa1263200;Name=Msa1263200 |
| chr8_2 | mRNA | 66272408 | 66277465 | 66272408 | ID=Msa1263200-mRNA-1;Parent=Msa1263200;Name=Msa1263200-mRNA-1;_AED=0.10;_eAED=0.10;_QI=83|1|1|1|1|1|6|389|548 |
| chr8_2 | exon | 66272408 | 66272867 | 66272408 | ID=Msa1263200-mRNA-1:exon:21603;Parent=Msa1263200-mRNA-1 |
| chr8_2 | exon | 66273542 | 66274055 | 66273542 | ID=Msa1263200-mRNA-1:exon:21602;Parent=Msa1263200-mRNA-1 |
| chr8_2 | exon | 66274267 | 66274362 | 66274267 | ID=Msa1263200-mRNA-1:exon:21601;Parent=Msa1263200-mRNA-1 |
| chr8_2 | exon | 66274479 | 66274522 | 66274479 | ID=Msa1263200-mRNA-1:exon:21600;Parent=Msa1263200-mRNA-1 |
| chr8_2 | exon | 66275799 | 66276276 | 66275799 | ID=Msa1263200-mRNA-1:exon:21599;Parent=Msa1263200-mRNA-1 |
| chr8_2 | exon | 66276939 | 66277465 | 66276939 | ID=Msa1263200-mRNA-1:exon:21598;Parent=Msa1263200-mRNA-1 |
| chr8_2 | five_prime_UTR | 66277383 | 66277465 | 66277383 | ID=Msa1263200-mRNA-1:five_prime_utr;Parent=Msa1263200-mRNA-1 |
| chr8_2 | CDS | 66276939 | 66277382 | 66276939 | ID=Msa1263200-mRNA-1:cds;Parent=Msa1263200-mRNA-1 |
| chr8_2 | CDS | 66275799 | 66276276 | 66275799 | ID=Msa1263200-mRNA-1:cds;Parent=Msa1263200-mRNA-1 |
| chr8_2 | CDS | 66274479 | 66274522 | 66274479 | ID=Msa1263200-mRNA-1:cds;Parent=Msa1263200-mRNA-1 |
| chr8_2 | CDS | 66274267 | 66274362 | 66274267 | ID=Msa1263200-mRNA-1:cds;Parent=Msa1263200-mRNA-1 |
| chr8_2 | CDS | 66273542 | 66274055 | 66273542 | ID=Msa1263200-mRNA-1:cds;Parent=Msa1263200-mRNA-1 |
| chr8_2 | CDS | 66272797 | 66272867 | 66272797 | ID=Msa1263200-mRNA-1:cds;Parent=Msa1263200-mRNA-1 |
| chr8_2 | three_prime_UTR | 66272408 | 66272796 | 66272408 | ID=Msa1263200-mRNA-1:three_prime_utr;Parent=Msa1263200-mRNA-1 |
| Gene Sequence |
| Protein sequence |
