Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1224540 | G7JLM9 | 53.741 | 147 | 35 | 4 | 91 | 225 | 75 | 200 | 6.88e-30 | 122 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0027250 | Msa1224540 | -0.802785 | 4.758786e-49 | -8.615850e-47 |
| Msa0746380 | Msa1224540 | 0.818925 | 1.520113e-52 | -8.615850e-47 |
| Msa1224540 | Msa1333790 | 0.850583 | 1.546027e-60 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1224540 | MtrunA17_Chr4g0075851 | 65.672 | 67 | 20 | 1 | 91 | 154 | 75 | 141 | 1.12e-22 | 92.0 |
| Msa1224540 | MtrunA17_Chr4g0075811 | 66.667 | 60 | 20 | 0 | 262 | 321 | 28 | 87 | 7.80e-19 | 80.9 |
| Msa1224540 | MtrunA17_Chr4g0075841 | 55.405 | 74 | 16 | 2 | 161 | 225 | 1 | 66 | 3.54e-15 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 80 sgRNAs with CRISPR-Local
Find 274 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAACTCTTCGTGATAATTT+TGG | 0.137277 | 8_1:+89512889 | Msa1224540:three_prime_UTR |
| GACAATTCCACTTCCCTTCT+TGG | 0.194651 | 8_1:-89512343 | None:intergenic |
| GACAACTCCACTTCCCTTCT+TGG | 0.225568 | 8_1:-89512286 | None:intergenic |
| TGTGACTTCACTGGCCTAAT+TGG | 0.247029 | 8_1:-89509157 | None:intergenic |
| AATAAGCCTGACTTCTTTGT+TGG | 0.323715 | 8_1:+89512531 | Msa1224540:CDS |
| TGGATCCATAGCAGTAGTTC+TGG | 0.331711 | 8_1:-89509137 | None:intergenic |
| CTCAGACACCTTTACCATCT+TGG | 0.338125 | 8_1:-89512505 | None:intergenic |
| GAGCCACCATCAGAAATTTC+AGG | 0.354687 | 8_1:-89512174 | None:intergenic |
| ACTCAATTGCAGCCTCTCTA+AGG | 0.372771 | 8_1:-89511916 | None:intergenic |
| CAATTCCGATTGAAGCTTGC+CGG | 0.387284 | 8_1:+89508145 | Msa1224540:CDS |
| TCAACTTTACTGTTTCAATC+TGG | 0.387747 | 8_1:+89512851 | Msa1224540:three_prime_UTR |
| TTAATTTAGGACTGTCACTA+TGG | 0.390979 | 8_1:+89509078 | Msa1224540:intron |
| TTATCTTCTCCCAGTCCAAT+TGG | 0.406365 | 8_1:-89511940 | None:intergenic |
| ACTAGTCTTGCACTTCTTCT+CGG | 0.408587 | 8_1:-89512315 | None:intergenic |
| CGGCAAGCTTCAATCGGAAT+TGG | 0.410141 | 8_1:-89508144 | None:intergenic |
| GAAGGAGAAGGAGAAAGAAA+AGG | 0.425977 | 8_1:+89512780 | Msa1224540:CDS |
| GCAACAGCTAAAGGCTTTGC+TGG | 0.426278 | 8_1:+89512684 | Msa1224540:intron |
| GGCTGCAATTGAGTTCCAAT+TGG | 0.440475 | 8_1:+89511925 | Msa1224540:CDS |
| CTACTGCTATGGATCCAATT+AGG | 0.440681 | 8_1:+89509143 | Msa1224540:CDS |
| CCAGTTCCCTTAGCTCCCTT+AGG | 0.443209 | 8_1:-89512369 | None:intergenic |
| CCTAAGGGAGCTAAGGGAAC+TGG | 0.452525 | 8_1:+89512369 | Msa1224540:CDS |
| TCTTAATATCTGCAGTGTCC+TGG | 0.453463 | 8_1:-89509183 | None:intergenic |
| TGATCCTTTCACTCAAGAGC+TGG | 0.469300 | 8_1:+89511886 | Msa1224540:CDS |
| CAATTGAGTTCCAATTGGAC+TGG | 0.475135 | 8_1:+89511930 | Msa1224540:CDS |
| AATGACACCTGAGATGCTTA+AGG | 0.475276 | 8_1:+89511997 | Msa1224540:CDS |
| TCTACGAATATGAATGTTGA+AGG | 0.476392 | 8_1:-89508241 | None:intergenic |
| CAGTAGTTCTGGGTATTCTC+TGG | 0.479823 | 8_1:-89509126 | None:intergenic |
| AGAAAAGGAAAAGTAGCAGC+AGG | 0.496648 | 8_1:+89512795 | Msa1224540:exon |
| CAGCTAAAGGCTTTGCTGGA+TGG | 0.497414 | 8_1:+89512688 | Msa1224540:intron |
| TGTCATTCCTAAGGGAGCTA+AGG | 0.498138 | 8_1:+89512362 | Msa1224540:CDS |
| AATTCCACTTCCCTTCTTGG+AGG | 0.503668 | 8_1:-89512340 | None:intergenic |
| CTATCTCCAACAAAGAAGTC+AGG | 0.503929 | 8_1:-89512537 | None:intergenic |
| GTCTCCTCCAAGAAGGGAAG+TGG | 0.505425 | 8_1:+89512279 | Msa1224540:CDS |
| TTTAGGACTGTCACTATGGA+GGG | 0.506859 | 8_1:+89509082 | Msa1224540:intron |
| GCCAGTGAAGTCACATGTCC+AGG | 0.508533 | 8_1:+89509165 | Msa1224540:CDS |
| AAGTGGAATTGTCATTCCTA+AGG | 0.512679 | 8_1:+89512353 | Msa1224540:CDS |
| ACTATGGAGGGAAAACGCAC+TGG | 0.516129 | 8_1:+89509094 | Msa1224540:CDS |
| AACTCCACTTCCCTTCTTGG+AGG | 0.521516 | 8_1:-89512283 | None:intergenic |
| AGTAAGACTCGGACAGATGA+TGG | 0.523165 | 8_1:+89512225 | Msa1224540:CDS |
| AGAGAAGAAGGAGAAGGAGA+AGG | 0.525181 | 8_1:+89512768 | Msa1224540:CDS |
| TGGCACCGGCAAGCTTCAAT+CGG | 0.525511 | 8_1:-89508150 | None:intergenic |
| AGCTCCAGCTCTTGAGTGAA+AGG | 0.526439 | 8_1:-89511890 | None:intergenic |
| CTTTCTCTCATCGCTCTCAA+CGG | 0.528933 | 8_1:+89508276 | Msa1224540:CDS |
| GTCATTCCTAAGGGAGCTAA+GGG | 0.530850 | 8_1:+89512363 | Msa1224540:CDS |
| GGATCCATAGCAGTAGTTCT+GGG | 0.531793 | 8_1:-89509136 | None:intergenic |
| GTTTCCTCCAAGAAGGGAAG+TGG | 0.532451 | 8_1:+89512336 | Msa1224540:CDS |
| TTTACAAGAGAAGAAGGAGA+AGG | 0.541855 | 8_1:+89512762 | Msa1224540:CDS |
| CTGGATGGTAACAAACTGAT+GGG | 0.543990 | 8_1:+89512703 | Msa1224540:CDS |
| AATTGAGTTCCAATTGGACT+GGG | 0.547012 | 8_1:+89511931 | Msa1224540:CDS |
| TGTTACAGATGTTGATGAGC+TGG | 0.551297 | 8_1:-89508170 | None:intergenic |
| TATATATGTAAGTAACTACT+TGG | 0.552644 | 8_1:-89508200 | None:intergenic |
| AATACCCAGAACTACTGCTA+TGG | 0.553585 | 8_1:+89509132 | Msa1224540:CDS |
| AAGACTAGTTTCCTCCAAGA+AGG | 0.555321 | 8_1:+89512329 | Msa1224540:CDS |
| TCCTGGACATGTGACTTCAC+TGG | 0.556285 | 8_1:-89509166 | None:intergenic |
| AAGACTAGTCTCCTCCAAGA+AGG | 0.566971 | 8_1:+89512272 | Msa1224540:CDS |
| GCTGGATGGTAACAAACTGA+TGG | 0.570365 | 8_1:+89512702 | Msa1224540:CDS |
| AGATGTTGATGAGCTGGCAC+CGG | 0.571765 | 8_1:-89508164 | None:intergenic |
| ATTTAGGACTGTCACTATGG+AGG | 0.573114 | 8_1:+89509081 | Msa1224540:intron |
| CTATGGAGGGAAAACGCACT+GGG | 0.587219 | 8_1:+89509095 | Msa1224540:CDS |
| AATATGAATGTTGAAGGAGA+GGG | 0.595497 | 8_1:-89508235 | None:intergenic |
| GCACCTGAAATTTCTGATGG+TGG | 0.596081 | 8_1:+89512171 | Msa1224540:CDS |
| AGACTAGTCTCCTCCAAGAA+GGG | 0.599363 | 8_1:+89512273 | Msa1224540:CDS |
| AAAATAACCTGAAGATGAGG+AGG | 0.600134 | 8_1:+89511838 | Msa1224540:intron |
| GAATATGAATGTTGAAGGAG+AGG | 0.600142 | 8_1:-89508236 | None:intergenic |
| AAGGAAAAGTAGCAGCAGGA+AGG | 0.607126 | 8_1:+89512799 | Msa1224540:exon |
| ACAGGCTAAGTATATTGAGA+TGG | 0.610969 | 8_1:+89512088 | Msa1224540:intron |
| TTGTTGGAGATAGCTCCGCT+AGG | 0.613538 | 8_1:+89512547 | Msa1224540:CDS |
| ACAATTGCATTGACTGCACA+AGG | 0.614395 | 8_1:-89512984 | None:intergenic |
| GCTGGAGCTGCACCTTAGAG+AGG | 0.617395 | 8_1:+89511904 | Msa1224540:CDS |
| AGTGGAATTGTCATTCCTAA+GGG | 0.624122 | 8_1:+89512354 | Msa1224540:CDS |
| AGACTAGTTTCCTCCAAGAA+GGG | 0.626970 | 8_1:+89512330 | Msa1224540:CDS |
| TCAAAATGAATAATACTACA+AGG | 0.628367 | 8_1:+89508121 | None:intergenic |
| GTTATTAGAATTATTCCTAG+CGG | 0.645148 | 8_1:-89512562 | None:intergenic |
| GTGACTCAAGCAGTAAGACT+CGG | 0.647491 | 8_1:+89512214 | Msa1224540:CDS |
| TGGATGGTAACAAACTGATG+GGG | 0.665765 | 8_1:+89512704 | Msa1224540:CDS |
| AAGGGAACTGGAGACAACAA+AGG | 0.668017 | 8_1:+89512381 | Msa1224540:CDS |
| GATGCACCTGAAATTTCTGA+TGG | 0.673308 | 8_1:+89512168 | Msa1224540:CDS |
| GGATGGTAACAAACTGATGG+GGG | 0.675199 | 8_1:+89512705 | Msa1224540:CDS |
| TTTGGTAAAACTGATGTGTG+TGG | 0.689711 | 8_1:+89512907 | Msa1224540:three_prime_UTR |
| TAACTCAGTTGATGACCCCG+TGG | 0.725768 | 8_1:+89512581 | Msa1224540:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATCAATTAAAACAAATAAT+CGG | - | chr8_1:89508769-89508788 | None:intergenic | 10.0% |
| !! | TATTAATCAATTAATTAACG+TGG | - | chr8_1:89508840-89508859 | None:intergenic | 15.0% |
| !!! | CTATGTATTTGATTTAATTT+AGG | + | chr8_1:89509065-89509084 | Msa1224540:intron | 15.0% |
| !!! | ACTTAAGTATAATTTTATAC+AGG | + | chr8_1:89512070-89512089 | Msa1224540:intron | 15.0% |
| !! | AAAAAAATGACAATTTCATA+GGG | - | chr8_1:89512620-89512639 | None:intergenic | 15.0% |
| !! | TATATATGTAAGTAACTACT+TGG | - | chr8_1:89508203-89508222 | None:intergenic | 20.0% |
| !! | AAAAAATCAATCAATTAACG+TGG | - | chr8_1:89508908-89508927 | None:intergenic | 20.0% |
| !!! | AACTTTTAGTCTCTTAAATT+AGG | + | chr8_1:89508987-89509006 | Msa1224540:intron | 20.0% |
| !! | ATATGAGAAAGTTACAATAA+AGG | - | chr8_1:89509332-89509351 | None:intergenic | 20.0% |
| !! | GTAACACAAAAAAAAAAACT+TGG | - | chr8_1:89510003-89510022 | None:intergenic | 20.0% |
| !! | ATATAGAGAAACAATCAATT+CGG | - | chr8_1:89510401-89510420 | None:intergenic | 20.0% |
| !!! | ATCATTTTTTTTTCTCTGTT+TGG | + | chr8_1:89511449-89511468 | Msa1224540:intron | 20.0% |
| !! | ATATGAGAAAGTTACAATAA+AGG | - | chr8_1:89509332-89509351 | None:intergenic | 20.0% |
| !!! | TATTTTCTAAAGTTAATAGC+AGG | - | chr8_1:89511824-89511843 | None:intergenic | 20.0% |
| !! | ACAACATTATCTATTCATTA+AGG | - | chr8_1:89512040-89512059 | None:intergenic | 20.0% |
| !! | GAAAAAAATGACAATTTCAT+AGG | - | chr8_1:89512621-89512640 | None:intergenic | 20.0% |
| !! | CTTCTTGTTAAAATTTGATA+TGG | + | chr8_1:89512640-89512659 | Msa1224540:intron | 20.0% |
| ! | GATGATTAATGTTATCGTAA+AGG | - | chr8_1:89508415-89508434 | None:intergenic | 25.0% |
| ! | ATCTGTGTTTGATGTAATTT+AGG | + | chr8_1:89508949-89508968 | Msa1224540:intron | 25.0% |
| ! | GAATAATGATAGTTAGTAGT+TGG | + | chr8_1:89509204-89509223 | Msa1224540:intron | 25.0% |
| !! | TACAATAAAGGAGTATATCA+AGG | - | chr8_1:89509320-89509339 | None:intergenic | 25.0% |
| ! | TAACAAACTCTTTGTATTGA+TGG | - | chr8_1:89509370-89509389 | None:intergenic | 25.0% |
| ! | AAAAAGATGTGAGAAAACTA+AGG | - | chr8_1:89509498-89509517 | None:intergenic | 25.0% |
| ! | ATAAGGAAATAGAAGAAGAA+AGG | - | chr8_1:89509619-89509638 | None:intergenic | 25.0% |
| ! | AGGAAAATGGAAATTGAATA+AGG | - | chr8_1:89509636-89509655 | None:intergenic | 25.0% |
| !! | ATAATTTTCCCCAAATCTTA+GGG | + | chr8_1:89509726-89509745 | Msa1224540:intron | 25.0% |
| ! | AATGAAATTGAATCAGGAAA+TGG | - | chr8_1:89509831-89509850 | None:intergenic | 25.0% |
| ! | GAGAAAATTAGAATAGTGAT+CGG | - | chr8_1:89509920-89509939 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTGTGTTACGCAA+TGG | + | chr8_1:89510007-89510026 | Msa1224540:intron | 25.0% |
| ! | ATACAACTTCTGAACAAAAA+AGG | - | chr8_1:89510122-89510141 | None:intergenic | 25.0% |
| !! | CTATTGGTATCTTCTTTTTA+TGG | + | chr8_1:89511245-89511264 | Msa1224540:intron | 25.0% |
| ! | GAATAATGATAGTTAGTAGT+TGG | + | chr8_1:89509204-89509223 | Msa1224540:intron | 25.0% |
| !! | TACAATAAAGGAGTATATCA+AGG | - | chr8_1:89509320-89509339 | None:intergenic | 25.0% |
| ! | TAACAAACTCTTTGTATTGA+TGG | - | chr8_1:89509370-89509389 | None:intergenic | 25.0% |
| ! | GTTATTAGAATTATTCCTAG+CGG | - | chr8_1:89512565-89512584 | None:intergenic | 25.0% |
| !!! | AGGGTATTTTTTTTTTACCA+CGG | - | chr8_1:89512601-89512620 | None:intergenic | 25.0% |
| !! | TGAAATTTTACAAGAGAAGA+AGG | + | chr8_1:89512756-89512775 | Msa1224540:CDS | 25.0% |
| AATATGAATGTTGAAGGAGA+GGG | - | chr8_1:89508238-89508257 | None:intergenic | 30.0% | |
| TCTACGAATATGAATGTTGA+AGG | - | chr8_1:89508244-89508263 | None:intergenic | 30.0% | |
| AAGGATTCATGAAAACGAAA+AGG | - | chr8_1:89508356-89508375 | None:intergenic | 30.0% | |
| !!! | TCAGGTTTTAGGCATTTTTA+CGG | + | chr8_1:89508488-89508507 | Msa1224540:intron | 30.0% |
| ! | ATTTTTCACAAGTGTTCTTG+TGG | + | chr8_1:89508786-89508805 | Msa1224540:intron | 30.0% |
| CAGATTATACTCAAGGATTA+TGG | - | chr8_1:89508934-89508953 | None:intergenic | 30.0% | |
| TCAAACACAGATTATACTCA+AGG | - | chr8_1:89508941-89508960 | None:intergenic | 30.0% | |
| ! | GTAATTTAGGACTGTCAATA+TGG | + | chr8_1:89508962-89508981 | Msa1224540:intron | 30.0% |
| ! | TTAATTTAGGACTGTCACTA+TGG | + | chr8_1:89509078-89509097 | Msa1224540:intron | 30.0% |
| AAGTGTTAGTTACTAGTTAG+TGG | + | chr8_1:89509279-89509298 | Msa1224540:intron | 30.0% | |
| GTATATCAAGGCCTATTTAT+AGG | - | chr8_1:89509308-89509327 | None:intergenic | 30.0% | |
| TGATACCATGTTAAGAAACA+TGG | - | chr8_1:89509420-89509439 | None:intergenic | 30.0% | |
| ! | CATAATTTTCCCCAAATCTT+AGG | + | chr8_1:89509725-89509744 | Msa1224540:intron | 30.0% |
| TCTCGAATGAAGAAACAAAA+CGG | - | chr8_1:89509782-89509801 | None:intergenic | 30.0% | |
| AGAACGAATGAAATTGAATC+AGG | - | chr8_1:89509837-89509856 | None:intergenic | 30.0% | |
| ! | ATTTTCTCCATTCTCTCATT+AGG | + | chr8_1:89509932-89509951 | Msa1224540:intron | 30.0% |
| AACAAATCCTAATGAGAGAA+TGG | - | chr8_1:89509942-89509961 | None:intergenic | 30.0% | |
| TAAAAAAACCAGGAGAACAA+GGG | - | chr8_1:89510500-89510519 | None:intergenic | 30.0% | |
| ATAAAAAAACCAGGAGAACA+AGG | - | chr8_1:89510501-89510520 | None:intergenic | 30.0% | |
| CATCATGGTATAAAAAAACC+AGG | - | chr8_1:89510510-89510529 | None:intergenic | 30.0% | |
| !!! | GGTTTTTTTATACCATGATG+TGG | + | chr8_1:89510510-89510529 | Msa1224540:intron | 30.0% |
| AAAGATGAAGAAGAAAGTCA+TGG | - | chr8_1:89510549-89510568 | None:intergenic | 30.0% | |
| AGATCAATAAAGCCAACAAA+GGG | - | chr8_1:89510996-89511015 | None:intergenic | 30.0% | |
| AAGATCAATAAAGCCAACAA+AGG | - | chr8_1:89510997-89511016 | None:intergenic | 30.0% | |
| TGGTTAAGTATTTCTCTCTA+TGG | + | chr8_1:89511062-89511081 | Msa1224540:intron | 30.0% | |
| !! | ATTGTTTGGATATGGTTTTG+TGG | + | chr8_1:89511119-89511138 | Msa1224540:intron | 30.0% |
| CTCAATAATACTTCAAACGT+AGG | - | chr8_1:89511307-89511326 | None:intergenic | 30.0% | |
| ! | ACGTTTGAAGTATTATTGAG+TGG | + | chr8_1:89511307-89511326 | Msa1224540:intron | 30.0% |
| CATCAATTGCAGAGAATATT+TGG | + | chr8_1:89511333-89511352 | Msa1224540:intron | 30.0% | |
| ! | TGCTCTTCAATTTTCATACA+AGG | - | chr8_1:89511384-89511403 | None:intergenic | 30.0% |
| AAGTGTTAGTTACTAGTTAG+TGG | + | chr8_1:89509279-89509298 | Msa1224540:intron | 30.0% | |
| GTATATCAAGGCCTATTTAT+AGG | - | chr8_1:89509308-89509327 | None:intergenic | 30.0% | |
| TAGAAAATAACCTGAAGATG+AGG | + | chr8_1:89511835-89511854 | Msa1224540:intron | 30.0% | |
| ! | TATTTTACCTTAAGCATCTC+AGG | - | chr8_1:89512007-89512026 | None:intergenic | 30.0% |
| TTACATTCACTCACTTGTTT+GGG | + | chr8_1:89512409-89512428 | Msa1224540:intron | 30.0% | |
| ATATACATGCTATTAAGCGT+AGG | + | chr8_1:89512465-89512484 | Msa1224540:intron | 30.0% | |
| ! | TTTACCATCTTGGCATTTTT+GGG | - | chr8_1:89512498-89512517 | None:intergenic | 30.0% |
| !!! | GGTATTTTTTTTTTACCACG+GGG | - | chr8_1:89512599-89512618 | None:intergenic | 30.0% |
| !!! | GGGTATTTTTTTTTTACCAC+GGG | - | chr8_1:89512600-89512619 | None:intergenic | 30.0% |
| !!! | TTTTTTGTTGCAACAGCTAA+AGG | + | chr8_1:89512675-89512694 | Msa1224540:intron | 30.0% |
| TCAACTTTACTGTTTCAATC+TGG | + | chr8_1:89512851-89512870 | Msa1224540:three_prime_UTR | 30.0% | |
| ! | CAAACTCTTCGTGATAATTT+TGG | + | chr8_1:89512889-89512908 | Msa1224540:three_prime_UTR | 30.0% |
| GAATATGAATGTTGAAGGAG+AGG | - | chr8_1:89508239-89508258 | None:intergenic | 35.0% | |
| ! | TCTCAACGTTTTCATCTTTC+AGG | + | chr8_1:89508308-89508327 | Msa1224540:intron | 35.0% |
| CATCAACAACAACAACAACA+AGG | - | chr8_1:89508375-89508394 | None:intergenic | 35.0% | |
| ATCTTTCTTCGTTCGATTTC+AGG | + | chr8_1:89508470-89508489 | Msa1224540:intron | 35.0% | |
| !!! | TTCGTTCGATTTCAGGTTTT+AGG | + | chr8_1:89508477-89508496 | Msa1224540:intron | 35.0% |
| GCTCTAACTAACTTCATACT+TGG | - | chr8_1:89509249-89509268 | None:intergenic | 35.0% | |
| ! | GTTAGTGGATGCCTATAAAT+AGG | + | chr8_1:89509294-89509313 | Msa1224540:intron | 35.0% |
| ATAGTGAAAACTGACGAGAA+AGG | - | chr8_1:89509540-89509559 | None:intergenic | 35.0% | |
| AATTACGAACAGAATCACGA+AGG | - | chr8_1:89509688-89509707 | None:intergenic | 35.0% | |
| TCGTGATTCTGTTCGTAATT+TGG | + | chr8_1:89509688-89509707 | Msa1224540:intron | 35.0% | |
| ATCGCAAAACCCTAAGATTT+GGG | - | chr8_1:89509738-89509757 | None:intergenic | 35.0% | |
| AATCGCAAAACCCTAAGATT+TGG | - | chr8_1:89509739-89509758 | None:intergenic | 35.0% | |
| GAACAATTCGATTTCGTGAT+TGG | + | chr8_1:89509802-89509821 | Msa1224540:intron | 35.0% | |
| ATTCTTCTTTCTCGTGTTTC+AGG | + | chr8_1:89509966-89509985 | Msa1224540:intron | 35.0% | |
| !!! | GTTTTTTGTTGTTCAGAAGC+TGG | + | chr8_1:89510029-89510048 | Msa1224540:intron | 35.0% |
| !!! | CTTCAGAAGCTTCTTTTTTG+TGG | + | chr8_1:89510159-89510178 | Msa1224540:intron | 35.0% |
| GAGAAACAATCAATTCGGAA+AGG | - | chr8_1:89510396-89510415 | None:intergenic | 35.0% | |
| !! | GATTCTTAGTTTGTTTGTCC+TGG | + | chr8_1:89510458-89510477 | Msa1224540:intron | 35.0% |
| GGAAAATTTCAGTAACATCC+AGG | - | chr8_1:89510479-89510498 | None:intergenic | 35.0% | |
| TCATCTTTCTTATTCGCCTA+TGG | + | chr8_1:89510561-89510580 | Msa1224540:intron | 35.0% | |
| AAGACAAAAATCAACGCCAT+AGG | - | chr8_1:89510580-89510599 | None:intergenic | 35.0% | |
| ! | TCTTTAGCTTCTGTCTATGA+TGG | + | chr8_1:89510767-89510786 | Msa1224540:intron | 35.0% |
| TATGATGCTTCTGTCATAGA+TGG | + | chr8_1:89510795-89510814 | Msa1224540:intron | 35.0% | |
| GATGGTTAAGCATTTCTTGT+TGG | + | chr8_1:89510813-89510832 | Msa1224540:intron | 35.0% | |
| CTAACATCAAACAAGCCATA+AGG | - | chr8_1:89510899-89510918 | None:intergenic | 35.0% | |
| TGATCTTAGCTTCTGTTAAG+TGG | + | chr8_1:89511010-89511029 | Msa1224540:intron | 35.0% | |
| !! | ATCAGTTTGTTGTCAGTGTT+TGG | + | chr8_1:89511094-89511113 | Msa1224540:intron | 35.0% |
| GTTTGGACATTGTTTGGATA+TGG | + | chr8_1:89511111-89511130 | Msa1224540:intron | 35.0% | |
| TTGGAGGAGTTATATGGAAA+AGG | + | chr8_1:89511166-89511185 | Msa1224540:intron | 35.0% | |
| ATAGTACTCACAAACGACAA+AGG | - | chr8_1:89511209-89511228 | None:intergenic | 35.0% | |
| GAGTGAATGTTCATTCTTAC+TGG | + | chr8_1:89511267-89511286 | Msa1224540:intron | 35.0% | |
| TGAATGTTCATTCTTACTGG+AGG | + | chr8_1:89511270-89511289 | Msa1224540:intron | 35.0% | |
| TTTCATACAAGGAACACTGA+AGG | - | chr8_1:89511373-89511392 | None:intergenic | 35.0% | |
| TTCTCTTACCTTGAGTTTGA+GGG | + | chr8_1:89511505-89511524 | Msa1224540:intron | 35.0% | |
| GCTCTAACTAACTTCATACT+TGG | - | chr8_1:89509249-89509268 | None:intergenic | 35.0% | |
| ! | GTTAGTGGATGCCTATAAAT+AGG | + | chr8_1:89509294-89509313 | Msa1224540:intron | 35.0% |
| TTGTCTGCTGTTAAGAAACA+TGG | - | chr8_1:89511754-89511773 | None:intergenic | 35.0% | |
| AAAATAACCTGAAGATGAGG+AGG | + | chr8_1:89511838-89511857 | Msa1224540:intron | 35.0% | |
| AATTGAGTTCCAATTGGACT+GGG | + | chr8_1:89511931-89511950 | Msa1224540:CDS | 35.0% | |
| ACAGGCTAAGTATATTGAGA+TGG | + | chr8_1:89512088-89512107 | Msa1224540:intron | 35.0% | |
| TCCTGGAATTACTAGAAAAG+AGG | + | chr8_1:89512146-89512165 | Msa1224540:intron | 35.0% | |
| !! | TCCTCTTTTCTAGTAATTCC+AGG | - | chr8_1:89512150-89512169 | None:intergenic | 35.0% |
| AAGTGGAATTGTCATTCCTA+AGG | + | chr8_1:89512353-89512372 | Msa1224540:CDS | 35.0% | |
| AGTGGAATTGTCATTCCTAA+GGG | + | chr8_1:89512354-89512373 | Msa1224540:CDS | 35.0% | |
| CTTACATTCACTCACTTGTT+TGG | + | chr8_1:89512408-89512427 | Msa1224540:intron | 35.0% | |
| ! | CTTTACCATCTTGGCATTTT+TGG | - | chr8_1:89512499-89512518 | None:intergenic | 35.0% |
| CAAAAATGCCAAGATGGTAA+AGG | + | chr8_1:89512497-89512516 | Msa1224540:CDS | 35.0% | |
| AATAAGCCTGACTTCTTTGT+TGG | + | chr8_1:89512531-89512550 | Msa1224540:CDS | 35.0% | |
| TTTACAAGAGAAGAAGGAGA+AGG | + | chr8_1:89512762-89512781 | Msa1224540:CDS | 35.0% | |
| TTTGGTAAAACTGATGTGTG+TGG | + | chr8_1:89512907-89512926 | Msa1224540:three_prime_UTR | 35.0% | |
| ! | TGTTACAGATGTTGATGAGC+TGG | - | chr8_1:89508173-89508192 | None:intergenic | 40.0% |
| CGAAGATTCATCAGTGAACA+AGG | - | chr8_1:89508560-89508579 | None:intergenic | 40.0% | |
| !! | GTTTTAGCGGCACATCTTTT+CGG | + | chr8_1:89508595-89508614 | Msa1224540:CDS | 40.0% |
| ! | ATTTAGGACTGTCACTATGG+AGG | + | chr8_1:89509081-89509100 | Msa1224540:intron | 40.0% |
| ! | TTTAGGACTGTCACTATGGA+GGG | + | chr8_1:89509082-89509101 | Msa1224540:intron | 40.0% |
| AATACCCAGAACTACTGCTA+TGG | + | chr8_1:89509132-89509151 | Msa1224540:CDS | 40.0% | |
| CTACTGCTATGGATCCAATT+AGG | + | chr8_1:89509143-89509162 | Msa1224540:CDS | 40.0% | |
| TCTTAATATCTGCAGTGTCC+TGG | - | chr8_1:89509186-89509205 | None:intergenic | 40.0% | |
| GTTAAGAAACATGGCATCCA+TGG | - | chr8_1:89509411-89509430 | None:intergenic | 40.0% | |
| GGATGCCATGTTTCTTAACA+TGG | + | chr8_1:89509412-89509431 | Msa1224540:intron | 40.0% | |
| ACATGGTATCAGAGCAAATC+TGG | + | chr8_1:89509429-89509448 | Msa1224540:intron | 40.0% | |
| AAATCTGGTATCCTCCTTGA+AGG | + | chr8_1:89509444-89509463 | Msa1224540:intron | 40.0% | |
| ! | ATTTTCTCGAGAAAACGCAG+CGG | - | chr8_1:89509475-89509494 | None:intergenic | 40.0% |
| ACGCAATTGAACGAGGAAAA+TGG | - | chr8_1:89509649-89509668 | None:intergenic | 40.0% | |
| ACAAAACACGCAATTGAACG+AGG | - | chr8_1:89509656-89509675 | None:intergenic | 40.0% | |
| TCGCAAAACCCTAAGATTTG+GGG | - | chr8_1:89509737-89509756 | None:intergenic | 40.0% | |
| !! | AACCTGTTTTGTTCAGAAGC+TGG | + | chr8_1:89510063-89510082 | Msa1224540:intron | 40.0% |
| AACCAGCTTCTGAACAAAAC+AGG | - | chr8_1:89510068-89510087 | None:intergenic | 40.0% | |
| !!! | CAGAAGCTGTTTTTGTTCAG+AGG | + | chr8_1:89510096-89510115 | Msa1224540:intron | 40.0% |
| ATGCTTCTGAACCACAAAGA+AGG | - | chr8_1:89510301-89510320 | None:intergenic | 40.0% | |
| ! | GAAATTTTCCCTTGTTCTCC+TGG | + | chr8_1:89510489-89510508 | Msa1224540:intron | 40.0% |
| ACAACAAGGCTTAACCATCA+TGG | - | chr8_1:89510613-89510632 | None:intergenic | 40.0% | |
| CAACAAAGCTTAACCATCCT+TGG | - | chr8_1:89510675-89510694 | None:intergenic | 40.0% | |
| CGTTGAGTATAGTTTCTGCT+TGG | + | chr8_1:89510859-89510878 | Msa1224540:intron | 40.0% | |
| TGAGTATAGTTTCTGCTTGG+TGG | + | chr8_1:89510862-89510881 | Msa1224540:intron | 40.0% | |
| TCAAACAAGCCATAAGGCAA+CGG | - | chr8_1:89510893-89510912 | None:intergenic | 40.0% | |
| !! | AAGAGTGCTTAACCACCATA+GGG | - | chr8_1:89510928-89510947 | None:intergenic | 40.0% |
| CACAATGCTTAACCACCATA+GGG | - | chr8_1:89510973-89510992 | None:intergenic | 40.0% | |
| ! | TTAAGCATTGTGCCCTTTGT+TGG | + | chr8_1:89510981-89511000 | Msa1224540:intron | 40.0% |
| TAAGAAGAAGCCACAACTCA+AGG | - | chr8_1:89511041-89511060 | None:intergenic | 40.0% | |
| GAGTTGTGGCTTCTTCTTAA+TGG | + | chr8_1:89511042-89511061 | Msa1224540:intron | 40.0% | |
| GTCAGTGTTTGGACATTGTT+TGG | + | chr8_1:89511105-89511124 | Msa1224540:intron | 40.0% | |
| TTCATACTCCCATACTGTGT+TGG | + | chr8_1:89511147-89511166 | Msa1224540:intron | 40.0% | |
| TAACTCCTCCAACACAGTAT+GGG | - | chr8_1:89511158-89511177 | None:intergenic | 40.0% | |
| ATAACTCCTCCAACACAGTA+TGG | - | chr8_1:89511159-89511178 | None:intergenic | 40.0% | |
| ACTGTGTTGGAGGAGTTATA+TGG | + | chr8_1:89511160-89511179 | Msa1224540:intron | 40.0% | |
| ATTTGCCTTGCATGCACTAT+TGG | + | chr8_1:89511229-89511248 | Msa1224540:intron | 40.0% | |
| AGATACCAATAGTGCATGCA+AGG | - | chr8_1:89511237-89511256 | None:intergenic | 40.0% | |
| ACAAGGAACACTGAAGGATA+GGG | - | chr8_1:89511367-89511386 | None:intergenic | 40.0% | |
| TACAAGGAACACTGAAGGAT+AGG | - | chr8_1:89511368-89511387 | None:intergenic | 40.0% | |
| ATTGAAGAGCAACCTCTGTT+TGG | + | chr8_1:89511393-89511412 | Msa1224540:intron | 40.0% | |
| AAGAGAAAGCTTCCAAACAG+AGG | - | chr8_1:89511408-89511427 | None:intergenic | 40.0% | |
| GTTCTCTTACCTTGAGTTTG+AGG | + | chr8_1:89511504-89511523 | Msa1224540:intron | 40.0% | |
| GTTAAGAAACATGGCATCCA+TGG | - | chr8_1:89509411-89509430 | None:intergenic | 40.0% | |
| TTCTTAACAGCAGACAATGC+AGG | + | chr8_1:89511757-89511776 | Msa1224540:intron | 40.0% | |
| CAATTGAGTTCCAATTGGAC+TGG | + | chr8_1:89511930-89511949 | Msa1224540:CDS | 40.0% | |
| TTATCTTCTCCCAGTCCAAT+TGG | - | chr8_1:89511943-89511962 | None:intergenic | 40.0% | |
| AATGACACCTGAGATGCTTA+AGG | + | chr8_1:89511997-89512016 | Msa1224540:CDS | 40.0% | |
| GACAAAAAGCAGTCAAATCC+TGG | + | chr8_1:89512129-89512148 | Msa1224540:intron | 40.0% | |
| GATGCACCTGAAATTTCTGA+TGG | + | chr8_1:89512168-89512187 | Msa1224540:CDS | 40.0% | |
| !! | ACTAGTCTTGCACTTCTTCT+CGG | - | chr8_1:89512261-89512280 | None:intergenic | 40.0% |
| !! | AAGACTAGTTTCCTCCAAGA+AGG | + | chr8_1:89512329-89512348 | Msa1224540:CDS | 40.0% |
| !! | AGACTAGTTTCCTCCAAGAA+GGG | + | chr8_1:89512330-89512349 | Msa1224540:CDS | 40.0% |
| GAATCCCAAAAATGCCAAGA+TGG | + | chr8_1:89512491-89512510 | Msa1224540:CDS | 40.0% | |
| CTATCTCCAACAAAGAAGTC+AGG | - | chr8_1:89512540-89512559 | None:intergenic | 40.0% | |
| CTGGATGGTAACAAACTGAT+GGG | + | chr8_1:89512703-89512722 | Msa1224540:CDS | 40.0% | |
| TGGATGGTAACAAACTGATG+GGG | + | chr8_1:89512704-89512723 | Msa1224540:CDS | 40.0% | |
| GAAGGAGAAGGAGAAAGAAA+AGG | + | chr8_1:89512780-89512799 | Msa1224540:CDS | 40.0% | |
| AGAAAAGGAAAAGTAGCAGC+AGG | + | chr8_1:89512795-89512814 | Msa1224540:exon | 40.0% | |
| !! | ACAATTGCATTGACTGCACA+AGG | - | chr8_1:89512987-89513006 | None:intergenic | 40.0% |
| CAATTCCGATTGAAGCTTGC+CGG | + | chr8_1:89508145-89508164 | Msa1224540:CDS | 45.0% | |
| CTTTCTCTCATCGCTCTCAA+CGG | + | chr8_1:89508276-89508295 | Msa1224540:CDS | 45.0% | |
| ATCTTCGTTCGTTCCGTTTC+AGG | + | chr8_1:89508573-89508592 | Msa1224540:intron | 45.0% | |
| !!! | CGTTCCGTTTCAGGTTTTAG+CGG | + | chr8_1:89508582-89508601 | Msa1224540:intron | 45.0% |
| ! | TGTGCCGCTAAAACCTGAAA+CGG | - | chr8_1:89508589-89508608 | None:intergenic | 45.0% |
| TGAGAAGAAGAAGAGCGATG+AGG | - | chr8_1:89508628-89508647 | None:intergenic | 45.0% | |
| !! | CAGTAGTTCTGGGTATTCTC+TGG | - | chr8_1:89509129-89509148 | None:intergenic | 45.0% |
| GGATCCATAGCAGTAGTTCT+GGG | - | chr8_1:89509139-89509158 | None:intergenic | 45.0% | |
| TGGATCCATAGCAGTAGTTC+TGG | - | chr8_1:89509140-89509159 | None:intergenic | 45.0% | |
| ! | TGTGACTTCACTGGCCTAAT+TGG | - | chr8_1:89509160-89509179 | None:intergenic | 45.0% |
| ! | GCTTTTCTCTCCTTCATCCA+TGG | + | chr8_1:89509391-89509410 | Msa1224540:intron | 45.0% |
| AACATGGCATCCATGGATGA+AGG | - | chr8_1:89509404-89509423 | None:intergenic | 45.0% | |
| GAACAAAGACGAACTCACGA+CGG | - | chr8_1:89509574-89509593 | None:intergenic | 45.0% | |
| CGGAAACTGCGAAATCGAAT+TGG | - | chr8_1:89509762-89509781 | None:intergenic | 45.0% | |
| CTCTTCAGAAGCCTTCTTTG+TGG | + | chr8_1:89510287-89510306 | Msa1224540:intron | 45.0% | |
| TTGTCAAGCTCTTGTGCAAG+TGG | + | chr8_1:89510420-89510439 | Msa1224540:intron | 45.0% | |
| CAGAAACTGTAGCCACATCA+TGG | - | chr8_1:89510525-89510544 | None:intergenic | 45.0% | |
| TCTTGTGCTTCTGTCCATGA+TGG | + | chr8_1:89510596-89510615 | Msa1224540:intron | 45.0% | |
| ! | TCCATGACAGAAGCACAACA+AGG | - | chr8_1:89510627-89510646 | None:intergenic | 45.0% |
| TGTTGTGCTTCTGTCATGGA+TGG | + | chr8_1:89510627-89510646 | Msa1224540:intron | 45.0% | |
| ! | GCTTTGTTGTGCTTCTGTCA+TGG | + | chr8_1:89510686-89510705 | Msa1224540:intron | 45.0% |
| TGTTGTGCTTCTGTCATGGA+TGG | + | chr8_1:89510627-89510646 | Msa1224540:intron | 45.0% | |
| AAACGACGCTTTACCATCCT+TGG | - | chr8_1:89510738-89510757 | None:intergenic | 45.0% | |
| ! | TGATGTTAGCTTCTGCCCTA+TGG | + | chr8_1:89510910-89510929 | Msa1224540:intron | 45.0% |
| !! | GAAGAGTGCTTAACCACCAT+AGG | - | chr8_1:89510929-89510948 | None:intergenic | 45.0% |
| GCACAATGCTTAACCACCAT+AGG | - | chr8_1:89510974-89510993 | None:intergenic | 45.0% | |
| ! | AGTGGTTAAGCCTTGAGTTG+TGG | + | chr8_1:89511028-89511047 | Msa1224540:intron | 45.0% |
| ATACTCCCATACTGTGTTGG+AGG | + | chr8_1:89511150-89511169 | Msa1224540:intron | 45.0% | |
| TCTTACCTTGAGTTTGAGGG+AGG | + | chr8_1:89511508-89511527 | Msa1224540:intron | 45.0% | |
| AATAGCCTCCCTCAAACTCA+AGG | - | chr8_1:89511516-89511535 | None:intergenic | 45.0% | |
| ! | GCTTTTCTCTCCTTCATCCA+TGG | + | chr8_1:89509391-89509410 | Msa1224540:intron | 45.0% |
| AACATGGCATCCATGGATGA+AGG | - | chr8_1:89509404-89509423 | None:intergenic | 45.0% | |
| TGATCCTTTCACTCAAGAGC+TGG | + | chr8_1:89511886-89511905 | Msa1224540:CDS | 45.0% | |
| ACTCAATTGCAGCCTCTCTA+AGG | - | chr8_1:89511919-89511938 | None:intergenic | 45.0% | |
| GGCTGCAATTGAGTTCCAAT+TGG | + | chr8_1:89511925-89511944 | Msa1224540:CDS | 45.0% | |
| GCACCTGAAATTTCTGATGG+TGG | + | chr8_1:89512171-89512190 | Msa1224540:CDS | 45.0% | |
| GAGCCACCATCAGAAATTTC+AGG | - | chr8_1:89512177-89512196 | None:intergenic | 45.0% | |
| GTGACTCAAGCAGTAAGACT+CGG | + | chr8_1:89512214-89512233 | Msa1224540:CDS | 45.0% | |
| AGTAAGACTCGGACAGATGA+TGG | + | chr8_1:89512225-89512244 | Msa1224540:CDS | 45.0% | |
| !! | AAGACTAGTCTCCTCCAAGA+AGG | + | chr8_1:89512272-89512291 | Msa1224540:CDS | 45.0% |
| !! | AGACTAGTCTCCTCCAAGAA+GGG | + | chr8_1:89512273-89512292 | Msa1224540:CDS | 45.0% |
| AATTCCACTTCCCTTCTTGG+AGG | - | chr8_1:89512343-89512362 | None:intergenic | 45.0% | |
| GACAATTCCACTTCCCTTCT+TGG | - | chr8_1:89512346-89512365 | None:intergenic | 45.0% | |
| TGTCATTCCTAAGGGAGCTA+AGG | + | chr8_1:89512362-89512381 | Msa1224540:CDS | 45.0% | |
| GTCATTCCTAAGGGAGCTAA+GGG | + | chr8_1:89512363-89512382 | Msa1224540:CDS | 45.0% | |
| AAGGGAACTGGAGACAACAA+AGG | + | chr8_1:89512381-89512400 | Msa1224540:CDS | 45.0% | |
| CTCAGACACCTTTACCATCT+TGG | - | chr8_1:89512508-89512527 | None:intergenic | 45.0% | |
| GCTGGATGGTAACAAACTGA+TGG | + | chr8_1:89512702-89512721 | Msa1224540:CDS | 45.0% | |
| GGATGGTAACAAACTGATGG+GGG | + | chr8_1:89512705-89512724 | Msa1224540:CDS | 45.0% | |
| AGAGAAGAAGGAGAAGGAGA+AGG | + | chr8_1:89512768-89512787 | Msa1224540:CDS | 45.0% | |
| AAGGAAAAGTAGCAGCAGGA+AGG | + | chr8_1:89512799-89512818 | Msa1224540:exon | 45.0% | |
| CGGCAAGCTTCAATCGGAAT+TGG | - | chr8_1:89508147-89508166 | None:intergenic | 50.0% | |
| ! | AGATGTTGATGAGCTGGCAC+CGG | - | chr8_1:89508167-89508186 | None:intergenic | 50.0% |
| ACTATGGAGGGAAAACGCAC+TGG | + | chr8_1:89509094-89509113 | Msa1224540:CDS | 50.0% | |
| CTATGGAGGGAAAACGCACT+GGG | + | chr8_1:89509095-89509114 | Msa1224540:CDS | 50.0% | |
| TCCTGGACATGTGACTTCAC+TGG | - | chr8_1:89509169-89509188 | None:intergenic | 50.0% | |
| CAGCGGAAAATCCTTCAAGG+AGG | - | chr8_1:89509458-89509477 | None:intergenic | 50.0% | |
| ACGCAGCGGAAAATCCTTCA+AGG | - | chr8_1:89509461-89509480 | None:intergenic | 50.0% | |
| ! | GCCTTGTTGTGCTTCTGTCA+TGG | + | chr8_1:89510623-89510642 | Msa1224540:intron | 50.0% |
| ! | CCTTGGACAGAAGCACAACA+AGG | - | chr8_1:89510658-89510677 | None:intergenic | 50.0% |
| ! | CCTTGTTGTGCTTCTGTCCA+AGG | + | chr8_1:89510655-89510674 | Msa1224540:intron | 50.0% |
| GTTGTGCTTCTGTCCAAGGA+TGG | + | chr8_1:89510659-89510678 | Msa1224540:intron | 50.0% | |
| CATCGTTGTGCTTCTGTCCA+AGG | + | chr8_1:89510718-89510737 | Msa1224540:intron | 50.0% | |
| GTTGTGCTTCTGTCCAAGGA+TGG | + | chr8_1:89510659-89510678 | Msa1224540:intron | 50.0% | |
| GTTGGTGTGCTTCTGTCAAG+TGG | + | chr8_1:89510831-89510850 | Msa1224540:intron | 50.0% | |
| GTGGTTAAGCCGTTGCCTTA+TGG | + | chr8_1:89510881-89510900 | Msa1224540:intron | 50.0% | |
| ! | TGTTAGCTTCTGCCCTATGG+TGG | + | chr8_1:89510913-89510932 | Msa1224540:intron | 50.0% |
| TCTTTCTCGCTTCTGCCCTA+TGG | + | chr8_1:89510955-89510974 | Msa1224540:intron | 50.0% | |
| AGCTCCAGCTCTTGAGTGAA+AGG | - | chr8_1:89511893-89511912 | None:intergenic | 50.0% | |
| AACTCCACTTCCCTTCTTGG+AGG | - | chr8_1:89512286-89512305 | None:intergenic | 50.0% | |
| GACAACTCCACTTCCCTTCT+TGG | - | chr8_1:89512289-89512308 | None:intergenic | 50.0% | |
| GTTTCCTCCAAGAAGGGAAG+TGG | + | chr8_1:89512336-89512355 | Msa1224540:CDS | 50.0% | |
| TTGTTGGAGATAGCTCCGCT+AGG | + | chr8_1:89512547-89512566 | Msa1224540:CDS | 50.0% | |
| !! | TAACTCAGTTGATGACCCCG+TGG | + | chr8_1:89512581-89512600 | Msa1224540:CDS | 50.0% |
| GCAACAGCTAAAGGCTTTGC+TGG | + | chr8_1:89512684-89512703 | Msa1224540:intron | 50.0% | |
| CAGCTAAAGGCTTTGCTGGA+TGG | + | chr8_1:89512688-89512707 | Msa1224540:intron | 50.0% | |
| !! | TGGCACCGGCAAGCTTCAAT+CGG | - | chr8_1:89508153-89508172 | None:intergenic | 55.0% |
| GCCAGTGAAGTCACATGTCC+AGG | + | chr8_1:89509165-89509184 | Msa1224540:CDS | 55.0% | |
| GCGAGCTAGAACAGACGAAC+TGG | - | chr8_1:89509893-89509912 | None:intergenic | 55.0% | |
| TTCTCGCTTCTGCCCTATGG+TGG | + | chr8_1:89510958-89510977 | Msa1224540:intron | 55.0% | |
| GTCTCCTCCAAGAAGGGAAG+TGG | + | chr8_1:89512279-89512298 | Msa1224540:CDS | 55.0% | |
| CCAGTTCCCTTAGCTCCCTT+AGG | - | chr8_1:89512372-89512391 | None:intergenic | 55.0% | |
| CCTAAGGGAGCTAAGGGAAC+TGG | + | chr8_1:89512369-89512388 | Msa1224540:CDS | 55.0% | |
| CGCAGCTCCTCCTCATCTTC+AGG | - | chr8_1:89511848-89511867 | None:intergenic | 60.0% | |
| GCTGGAGCTGCACCTTAGAG+AGG | + | chr8_1:89511904-89511923 | Msa1224540:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 89508126 | 89513016 | 89508126 | ID=Msa1224540;Name=Msa1224540 |
| chr8_1 | mRNA | 89508126 | 89513016 | 89508126 | ID=Msa1224540-mRNA-1;Parent=Msa1224540;Name=Msa1224540-mRNA-1;_AED=0.16;_eAED=0.28;_QI=0|0.57|0.37|1|0.28|0.25|8|206|335 |
| chr8_1 | exon | 89508126 | 89508297 | 89508126 | ID=Msa1224540-mRNA-1:exon:32508;Parent=Msa1224540-mRNA-1 |
| chr8_1 | exon | 89508595 | 89508616 | 89508595 | ID=Msa1224540-mRNA-1:exon:32509;Parent=Msa1224540-mRNA-1 |
| chr8_1 | exon | 89509087 | 89509214 | 89509087 | ID=Msa1224540-mRNA-1:exon:32510;Parent=Msa1224540-mRNA-1 |
| chr8_1 | exon | 89511852 | 89512018 | 89511852 | ID=Msa1224540-mRNA-1:exon:32511;Parent=Msa1224540-mRNA-1 |
| chr8_1 | exon | 89512092 | 89512139 | 89512092 | ID=Msa1224540-mRNA-1:exon:32512;Parent=Msa1224540-mRNA-1 |
| chr8_1 | exon | 89512168 | 89512402 | 89512168 | ID=Msa1224540-mRNA-1:exon:32513;Parent=Msa1224540-mRNA-1 |
| chr8_1 | exon | 89512487 | 89512602 | 89512487 | ID=Msa1224540-mRNA-1:exon:32514;Parent=Msa1224540-mRNA-1 |
| chr8_1 | exon | 89512691 | 89513016 | 89512691 | ID=Msa1224540-mRNA-1:exon:32515;Parent=Msa1224540-mRNA-1 |
| chr8_1 | CDS | 89508126 | 89508297 | 89508126 | ID=Msa1224540-mRNA-1:cds;Parent=Msa1224540-mRNA-1 |
| chr8_1 | CDS | 89508595 | 89508616 | 89508595 | ID=Msa1224540-mRNA-1:cds;Parent=Msa1224540-mRNA-1 |
| chr8_1 | CDS | 89509087 | 89509214 | 89509087 | ID=Msa1224540-mRNA-1:cds;Parent=Msa1224540-mRNA-1 |
| chr8_1 | CDS | 89511852 | 89512018 | 89511852 | ID=Msa1224540-mRNA-1:cds;Parent=Msa1224540-mRNA-1 |
| chr8_1 | CDS | 89512092 | 89512139 | 89512092 | ID=Msa1224540-mRNA-1:cds;Parent=Msa1224540-mRNA-1 |
| chr8_1 | CDS | 89512168 | 89512402 | 89512168 | ID=Msa1224540-mRNA-1:cds;Parent=Msa1224540-mRNA-1 |
| chr8_1 | CDS | 89512487 | 89512602 | 89512487 | ID=Msa1224540-mRNA-1:cds;Parent=Msa1224540-mRNA-1 |
| chr8_1 | CDS | 89512691 | 89512810 | 89512691 | ID=Msa1224540-mRNA-1:cds;Parent=Msa1224540-mRNA-1 |
| chr8_1 | three_prime_UTR | 89512811 | 89513016 | 89512811 | ID=Msa1224540-mRNA-1:three_prime_utr;Parent=Msa1224540-mRNA-1 |
| Gene Sequence |
| Protein sequence |
