Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1227200 | XP_013466139.1 | 96.862 | 478 | 15 | 0 | 1 | 478 | 1 | 478 | 0.0 | 964 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1227200 | sp|Q93YN9|IPPK_ARATH | 53.636 | 440 | 201 | 2 | 32 | 470 | 1 | 438 | 6.69e-162 | 468 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1227200 | A0A072VDS9 | 96.862 | 478 | 15 | 0 | 1 | 478 | 1 | 478 | 0.0 | 964 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003440 | Msa1227200 | 0.842306 | 2.802912e-58 | -8.615850e-47 |
| Msa0146500 | Msa1227200 | 0.880991 | 3.476133e-70 | -8.615850e-47 |
| Msa1227200 | Msa1385640 | 0.975424 | 6.289680e-140 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1227200 | MtrunA17_Chr1g0155511 | 96.862 | 478 | 15 | 0 | 1 | 478 | 1 | 478 | 0.0 | 964 |
| Msa1227200 | MtrunA17_Chr3g0141811 | 69.841 | 441 | 133 | 0 | 32 | 472 | 1 | 441 | 0.0 | 654 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1227200 | AT1G22100.1 | 54.587 | 436 | 191 | 3 | 33 | 467 | 3 | 432 | 9.93e-164 | 470 |
| Msa1227200 | AT5G42810.1 | 53.636 | 440 | 201 | 2 | 32 | 470 | 1 | 438 | 6.80e-163 | 468 |
| Msa1227200 | AT1G59312.2 | 49.327 | 446 | 216 | 6 | 33 | 471 | 3 | 445 | 1.08e-143 | 419 |
| Msa1227200 | AT1G58643.2 | 49.327 | 446 | 216 | 6 | 33 | 471 | 3 | 445 | 1.08e-143 | 419 |
| Msa1227200 | AT1G59312.1 | 49.776 | 446 | 214 | 7 | 33 | 471 | 38 | 480 | 2.44e-143 | 420 |
| Msa1227200 | AT1G58936.1 | 49.776 | 446 | 214 | 7 | 33 | 471 | 38 | 480 | 2.44e-143 | 420 |
| Msa1227200 | AT1G58643.1 | 49.776 | 446 | 214 | 7 | 33 | 471 | 38 | 480 | 2.44e-143 | 420 |
Find 115 sgRNAs with CRISPR-Local
Find 230 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACTTTCTAGACTCACATTT+TGG | 0.211675 | 8_2:-2280453 | Msa1227200:intron |
| GGCTTTATGAATTCTTTCTT+TGG | 0.242124 | 8_2:+2279368 | None:intergenic |
| TACCCCAGCATCAACATATT+TGG | 0.257064 | 8_2:+2280748 | None:intergenic |
| AAATGGAGATGCAAACTTAT+AGG | 0.304541 | 8_2:-2278422 | Msa1227200:exon |
| CTCCACATGAACGGCTCATC+TGG | 0.312520 | 8_2:-2280859 | Msa1227200:CDS |
| CAGCTTATCAGTTGAGATAA+AGG | 0.331799 | 8_2:-2279871 | Msa1227200:intron |
| TGCAACGCTGATTCCTTCCT+TGG | 0.337708 | 8_2:+2280908 | None:intergenic |
| AATGGAGATGCAAACTTATA+GGG | 0.348706 | 8_2:-2278421 | Msa1227200:exon |
| CCAAGGAAAGAGGAGGGTTC+TGG | 0.359741 | 8_2:-2278895 | Msa1227200:CDS |
| AATATTGTTCTCTCTTACAC+TGG | 0.362819 | 8_2:-2281706 | Msa1227200:CDS |
| CTGGGCGAGTTGATGTTTCA+AGG | 0.365906 | 8_2:-2280376 | Msa1227200:CDS |
| GTAGGAAGAAATCCGCATTT+AGG | 0.391832 | 8_2:+2279689 | None:intergenic |
| CTCTTTGCATTCTGCATCAC+TGG | 0.393035 | 8_2:-2278995 | Msa1227200:CDS |
| AAGTCTCAGTATGCAACTTC+AGG | 0.393468 | 8_2:+2278397 | None:intergenic |
| CCAGAACCCTCCTCTTTCCT+TGG | 0.396286 | 8_2:+2278895 | None:intergenic |
| TTACAAAGAGATGAGCAAAA+TGG | 0.397598 | 8_2:-2278455 | Msa1227200:CDS |
| GAGCATGGCGCGTAAAGAAT+TGG | 0.400860 | 8_2:-2279043 | Msa1227200:CDS |
| AGTAGTAAAGAGATCTTTGA+TGG | 0.402587 | 8_2:+2279347 | None:intergenic |
| GGTTCCAAATATGTTGATGC+TGG | 0.410935 | 8_2:-2280752 | Msa1227200:CDS |
| TTTATGAGTTATCATATATG+AGG | 0.412078 | 8_2:+2278158 | None:intergenic |
| TGAAGAAGATGCAGCTCATT+GGG | 0.412372 | 8_2:-2281752 | Msa1227200:CDS |
| AAAATGGATCATGGAAGAAA+TGG | 0.413794 | 8_2:-2278439 | Msa1227200:CDS |
| CTGAAGAAGATGCAGCTCAT+TGG | 0.417078 | 8_2:-2281753 | Msa1227200:CDS |
| CTTTATCTCAACTGATAAGC+TGG | 0.418788 | 8_2:+2279872 | None:intergenic |
| TCTCTCATACTCGGAGGGCT+TGG | 0.418888 | 8_2:-2279291 | Msa1227200:CDS |
| TGAAAGTACAGATGCATCTA+TGG | 0.423587 | 8_2:-2279259 | Msa1227200:CDS |
| AACCCACTCGATCTGTTCTC+TGG | 0.426001 | 8_2:-2279393 | Msa1227200:CDS |
| TTATTATGTGTTGAATTAAG+AGG | 0.426406 | 8_2:+2281979 | None:intergenic |
| ATATATGAGGAAACAAATAA+TGG | 0.426540 | 8_2:+2278171 | None:intergenic |
| CTCATACTCGGAGGGCTTGG+AGG | 0.427893 | 8_2:-2279288 | Msa1227200:CDS |
| CTACCCTCCTCACATGCTAT+TGG | 0.428346 | 8_2:-2278294 | Msa1227200:three_prime_UTR |
| GTTACTAGTCAACGCCCTGC+TGG | 0.430195 | 8_2:-2280395 | Msa1227200:CDS |
| CGTTGTGTTCCTCTGTGATC+AGG | 0.433813 | 8_2:+2281921 | None:intergenic |
| TCTAAAACATTTACTGTTGG+TGG | 0.434065 | 8_2:-2278117 | Msa1227200:three_prime_UTR |
| TCTTCAGATAAGGAAATTGC+TGG | 0.438795 | 8_2:-2280812 | Msa1227200:CDS |
| CAAAATAATTATGCAAAAGA+TGG | 0.440358 | 8_2:+2278231 | None:intergenic |
| TATACAGAAAATTGATAGTT+GGG | 0.446477 | 8_2:+2278270 | None:intergenic |
| CATGTCATGAAGCCTTTGCT+TGG | 0.452650 | 8_2:-2280773 | Msa1227200:CDS |
| CAGGTGTTGTTTGATTAAGA+TGG | 0.453937 | 8_2:+2281940 | None:intergenic |
| CTTGACAATATTGACATAGA+AGG | 0.455818 | 8_2:-2279102 | Msa1227200:CDS |
| ACTTATTTCCTCTTCAGATA+AGG | 0.460694 | 8_2:-2280822 | Msa1227200:CDS |
| TTTAAAACGGTTGAATAAAG+TGG | 0.467422 | 8_2:-2278515 | Msa1227200:CDS |
| GAAACATCAACTCGCCCAGC+AGG | 0.473865 | 8_2:+2280380 | None:intergenic |
| GTATACAGAAAATTGATAGT+TGG | 0.485821 | 8_2:+2278269 | None:intergenic |
| TCAGATATGAATCTTGAAGT+AGG | 0.485966 | 8_2:+2279671 | None:intergenic |
| TCTGCTTACCTTAAAATCAA+AGG | 0.487614 | 8_2:+2278831 | None:intergenic |
| GCAGCTCATTGGGTTTATAG+AGG | 0.490643 | 8_2:-2281742 | Msa1227200:CDS |
| CTTTCTAAAACATTTACTGT+TGG | 0.491748 | 8_2:-2278120 | Msa1227200:three_prime_UTR |
| CCATCATCAGCTTGAATGAC+CGG | 0.498277 | 8_2:+2279210 | None:intergenic |
| TTATTGACCTCGATTTAAAA+CGG | 0.501967 | 8_2:-2278528 | Msa1227200:CDS |
| GTGAAGCAAAATATTTATGC+AGG | 0.504797 | 8_2:+2278316 | None:intergenic |
| TCTGAAGAGGAAATAAGTTC+AGG | 0.504962 | 8_2:+2280827 | None:intergenic |
| AGCAATTTCCTTATCTGAAG+AGG | 0.506496 | 8_2:+2280814 | None:intergenic |
| AACCGTCTCAAGGAATTCCT+TGG | 0.514592 | 8_2:+2280427 | None:intergenic |
| GAGATGAGCAAAATGGATCA+TGG | 0.515742 | 8_2:-2278448 | Msa1227200:CDS |
| TATTATGTGTTGAATTAAGA+GGG | 0.518245 | 8_2:+2281980 | None:intergenic |
| GGAAAGCTTGAGAATTGTAA+AGG | 0.520521 | 8_2:-2278971 | Msa1227200:CDS |
| GTCTCAAAACCATACCTTGA+GGG | 0.523276 | 8_2:+2280303 | None:intergenic |
| TTAAATGGTTCTCTCATACT+CGG | 0.530482 | 8_2:-2279300 | Msa1227200:CDS |
| TTTATCTCAACTGATAAGCT+GGG | 0.534076 | 8_2:+2279873 | None:intergenic |
| GTTCCAAATATGTTGATGCT+GGG | 0.535103 | 8_2:-2280751 | Msa1227200:CDS |
| GAACCTCAAGGAGCTTATCA+AGG | 0.536139 | 8_2:+2279130 | None:intergenic |
| CCGGTCATTCAAGCTGATGA+TGG | 0.539433 | 8_2:-2279210 | Msa1227200:CDS |
| TATTCTGCATGATGCATTGG+AGG | 0.539828 | 8_2:-2278094 | Msa1227200:three_prime_UTR |
| TAAATAAGTTCTCTGTGCAT+TGG | 0.540290 | 8_2:+2279187 | None:intergenic |
| ATACTCGGAGGGCTTGGAGG+TGG | 0.540855 | 8_2:-2279285 | Msa1227200:CDS |
| CATTGGGTTTATAGAGGTGA+AGG | 0.550198 | 8_2:-2281736 | Msa1227200:CDS |
| TTACTAGTCAACGCCCTGCT+GGG | 0.550972 | 8_2:-2280394 | Msa1227200:CDS |
| CATTCTTCTCAACCGTCTCA+AGG | 0.551150 | 8_2:+2280417 | None:intergenic |
| TGTTTCATTTCAGGTAGTCA+AGG | 0.559197 | 8_2:-2279903 | Msa1227200:intron |
| CTATCTTCTTATCTAACTTG+TGG | 0.562101 | 8_2:+2278485 | None:intergenic |
| TGGTATTCTGCATGATGCAT+TGG | 0.566995 | 8_2:-2278097 | Msa1227200:three_prime_UTR |
| ATGAGGAAACAAATAATGGA+AGG | 0.577913 | 8_2:+2278175 | None:intergenic |
| ACTTGAAGATGAACTTCAGC+CGG | 0.579402 | 8_2:-2279229 | Msa1227200:CDS |
| ATGGTTCTCTCATACTCGGA+GGG | 0.583585 | 8_2:-2279296 | Msa1227200:CDS |
| ACATATTTGGAACCAAGCAA+AGG | 0.590042 | 8_2:+2280761 | None:intergenic |
| TGGGCGAGTTGATGTTTCAA+GGG | 0.590970 | 8_2:-2280375 | Msa1227200:CDS |
| TTCATGTGGAGTCAGAGCTA+TGG | 0.596545 | 8_2:+2280871 | None:intergenic |
| CATTCGCAAGTCTCCAAGGA+AGG | 0.599728 | 8_2:-2280921 | Msa1227200:CDS |
| ATCAAAATGTAGCCTAAATG+CGG | 0.601221 | 8_2:-2279701 | Msa1227200:intron |
| TTTGCATTCTGCATCACTGG+AGG | 0.601325 | 8_2:-2278992 | Msa1227200:CDS |
| TCTGAAATTGCAACATGGAG+AGG | 0.602662 | 8_2:-2279600 | Msa1227200:intron |
| TTCCAGATGAGCCGTTCATG+TGG | 0.604622 | 8_2:+2280857 | None:intergenic |
| TGCGCATTCGCAAGTCTCCA+AGG | 0.605257 | 8_2:-2280925 | Msa1227200:CDS |
| GACCAAGGAATTCCTTGAGA+CGG | 0.607660 | 8_2:-2280429 | Msa1227200:CDS |
| GATCATTCAATCTTCCCTCA+AGG | 0.608947 | 8_2:-2280317 | Msa1227200:intron |
| CTGAAGAAACTGCTATCAAG+AGG | 0.610082 | 8_2:-2279652 | Msa1227200:CDS |
| AGGAAGGAATCAGCGTTGCA+AGG | 0.612808 | 8_2:-2280905 | Msa1227200:CDS |
| CTCAAGATATACAGTATCGT+AGG | 0.616260 | 8_2:+2278867 | None:intergenic |
| CATTACTTCTCAACAGAGCA+TGG | 0.616815 | 8_2:-2279058 | Msa1227200:CDS |
| TAGCTCTGACTCCACATGAA+CGG | 0.620751 | 8_2:-2280868 | Msa1227200:CDS |
| TTTAGACCAAGGAAAGAGGA+GGG | 0.622681 | 8_2:-2278901 | Msa1227200:CDS |
| CTTCAGATAAGGAAATTGCT+GGG | 0.625703 | 8_2:-2280811 | Msa1227200:CDS |
| AAGAAACTGCTATCAAGAGG+AGG | 0.628067 | 8_2:-2279649 | Msa1227200:CDS |
| GTTGGGACCAATAGCATGTG+AGG | 0.633773 | 8_2:+2278287 | None:intergenic |
| TGTCAAGCTTCTGAACCTCA+AGG | 0.634666 | 8_2:+2279118 | None:intergenic |
| AGAACTTACATAAGAAGGAG+AGG | 0.634781 | 8_2:+2281681 | None:intergenic |
| GGACCAATAGCATGTGAGGA+GGG | 0.635570 | 8_2:+2278291 | None:intergenic |
| GATCCAGAGAACAGATCGAG+TGG | 0.637943 | 8_2:+2279390 | None:intergenic |
| AATCAGCGTTGCAAGGAGTG+AGG | 0.642103 | 8_2:-2280898 | Msa1227200:CDS |
| CAGTGATGCAGAATGCAAAG+AGG | 0.642291 | 8_2:+2278996 | None:intergenic |
| AGTCCTTGATAAGCTCCTTG+AGG | 0.646197 | 8_2:-2279133 | Msa1227200:CDS |
| CAAGCTCTGAAATTGCAACA+TGG | 0.647998 | 8_2:-2279605 | Msa1227200:CDS |
| GGGACCAATAGCATGTGAGG+AGG | 0.649926 | 8_2:+2278290 | None:intergenic |
| TTCCAAATATGTTGATGCTG+GGG | 0.654226 | 8_2:-2280750 | Msa1227200:intron |
| AAACATCAACTCGCCCAGCA+GGG | 0.655838 | 8_2:+2280381 | None:intergenic |
| TCACAGAGGAACACAACGCA+AGG | 0.662619 | 8_2:-2281916 | Msa1227200:intron |
| TTATCTCAACTGATAAGCTG+GGG | 0.664084 | 8_2:+2279874 | None:intergenic |
| AATGGTTCTCTCATACTCGG+AGG | 0.667393 | 8_2:-2279297 | Msa1227200:CDS |
| ATTCTGCATGATGCATTGGA+GGG | 0.667493 | 8_2:-2278093 | Msa1227200:three_prime_UTR |
| CTGCATGATGCATTGGAGGG+TGG | 0.681813 | 8_2:-2278090 | Msa1227200:three_prime_UTR |
| ATCCAGAGAACAGATCGAGT+GGG | 0.685169 | 8_2:+2279391 | None:intergenic |
| TTAAGATGGACTGCATGCAA+TGG | 0.702726 | 8_2:+2281954 | None:intergenic |
| CAAACAACACCTGATCACAG+AGG | 0.769583 | 8_2:-2281930 | Msa1227200:CDS |
| TATGTCTTCAGATTTCAGAG+CGG | 0.776737 | 8_2:-2279425 | Msa1227200:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCAAAAAATGTTTTTTTTTA+AGG | - | chr8_2:2278460-2278479 | Msa1227200:CDS | 10.0% |
| !!! | CTTTATTTTTTCTTTTATTA+TGG | - | chr8_2:2279006-2279025 | Msa1227200:CDS | 10.0% |
| !!! | AATTTTTCTATTGATAAAAA+CGG | - | chr8_2:2279503-2279522 | Msa1227200:intron | 10.0% |
| !!! | TTATTATTGGTTTAAATTTT+TGG | - | chr8_2:2281279-2281298 | Msa1227200:intron | 10.0% |
| !! | AAAGAAAAAATAAAGTCAAA+CGG | + | chr8_2:2279001-2279020 | None:intergenic | 15.0% |
| !!! | GTTTTTATCAATAGAAAAAT+TGG | + | chr8_2:2279504-2279523 | None:intergenic | 15.0% |
| !! | AACTAATGATATTCTTTAAT+GGG | + | chr8_2:2280275-2280294 | None:intergenic | 15.0% |
| !! | AAACTAATGATATTCTTTAA+TGG | + | chr8_2:2280276-2280295 | None:intergenic | 15.0% |
| !! | AAATTTCCAGTTATTATTAT+TGG | - | chr8_2:2281266-2281285 | Msa1227200:intron | 15.0% |
| !! | TTTAAACCAATAATAATAAC+TGG | + | chr8_2:2281275-2281294 | None:intergenic | 15.0% |
| !!! | TTTTTTGTAGATAAAGATAA+GGG | + | chr8_2:2281455-2281474 | None:intergenic | 15.0% |
| !! | TATTATGTGTTGAATTAAGA+GGG | + | chr8_2:2278098-2278117 | None:intergenic | 20.0% |
| !! | TTATTATGTGTTGAATTAAG+AGG | + | chr8_2:2278099-2278118 | None:intergenic | 20.0% |
| !! | AAAAAAGAACTTACATAAGA+AGG | + | chr8_2:2278402-2278421 | None:intergenic | 20.0% |
| !!! | ATATGTCTATAAACTGTTTT+CGG | - | chr8_2:2278719-2278738 | Msa1227200:intron | 20.0% |
| !!! | ACAAGAACTTTTCTATTAAT+AGG | + | chr8_2:2279400-2279419 | None:intergenic | 20.0% |
| !! | ACTTCTTATTCGTAAAAATA+GGG | + | chr8_2:2279542-2279561 | None:intergenic | 20.0% |
| !! | TACTTCTTATTCGTAAAAAT+AGG | + | chr8_2:2279543-2279562 | None:intergenic | 20.0% |
| !!! | AATGTTCATATTTTAACCAA+CGG | + | chr8_2:2279982-2280001 | None:intergenic | 20.0% |
| !! | TTGGTTAAAATATGAACATT+GGG | - | chr8_2:2279982-2280001 | Msa1227200:intron | 20.0% |
| !!! | CATCTATAGTTAAATTTTGT+AGG | + | chr8_2:2280506-2280525 | None:intergenic | 20.0% |
| !! | CTACAAAATTTAACTATAGA+TGG | - | chr8_2:2280504-2280523 | Msa1227200:intron | 20.0% |
| !! | CATATTGAAAAGTTTCTAAT+AGG | + | chr8_2:2280634-2280653 | None:intergenic | 20.0% |
| !!! | AATTTCCGTGTATTTTTAAA+TGG | - | chr8_2:2280760-2280779 | Msa1227200:CDS | 20.0% |
| !!! | CTTTTTTGTAGATAAAGATA+AGG | + | chr8_2:2281456-2281475 | None:intergenic | 20.0% |
| !!! | TATACAGAAAATTGATAGTT+GGG | + | chr8_2:2281808-2281827 | None:intergenic | 20.0% |
| !! | CAAAATAATTATGCAAAAGA+TGG | + | chr8_2:2281847-2281866 | None:intergenic | 20.0% |
| !! | ATATATGAGGAAACAAATAA+TGG | + | chr8_2:2281907-2281926 | None:intergenic | 20.0% |
| !! | TTTATGAGTTATCATATATG+AGG | + | chr8_2:2281920-2281939 | None:intergenic | 20.0% |
| !! | TTTTCATGTGAAAAAACAGA+TGG | - | chr8_2:2278287-2278306 | Msa1227200:three_prime_UTR | 25.0% |
| !!! | CTTGTTTTATGTTTCATGTT+TGG | - | chr8_2:2278526-2278545 | Msa1227200:CDS | 25.0% |
| ! | TGGATTGTAAAATTCATGTA+TGG | - | chr8_2:2278546-2278565 | Msa1227200:intron | 25.0% |
| ! | GCAATCATACAAAATTCTAT+TGG | + | chr8_2:2278587-2278606 | None:intergenic | 25.0% |
| ! | ACTTGTGATATTATTTGGAA+AGG | - | chr8_2:2278677-2278696 | Msa1227200:intron | 25.0% |
| ! | GAATTAGTTAAGAACCAATT+AGG | - | chr8_2:2278806-2278825 | Msa1227200:intron | 25.0% |
| ! | GGATATTCTGTTTAATTGTT+TGG | + | chr8_2:2279100-2279119 | None:intergenic | 25.0% |
| ! | AAATGTGTCTTACTTAGATT+GGG | - | chr8_2:2279120-2279139 | Msa1227200:CDS | 25.0% |
| !!! | ATGTTCATATTTTAACCAAC+GGG | + | chr8_2:2279981-2280000 | None:intergenic | 25.0% |
| ! | GTTGGTTAAAATATGAACAT+TGG | - | chr8_2:2279981-2280000 | Msa1227200:intron | 25.0% |
| ! | TAATGATATTCTTTAATGGG+AGG | + | chr8_2:2280272-2280291 | None:intergenic | 25.0% |
| ! | CAAAATTTAACTATAGATGG+TGG | - | chr8_2:2280507-2280526 | Msa1227200:intron | 25.0% |
| ! | GAGAACCATTTAAAAATACA+CGG | + | chr8_2:2280768-2280787 | None:intergenic | 25.0% |
| !! | GAATATGTTCAGTTCATTTT+TGG | - | chr8_2:2281319-2281338 | Msa1227200:intron | 25.0% |
| !!! | GGATTTAGTGTGTTTTTATA+CGG | - | chr8_2:2281402-2281421 | Msa1227200:intron | 25.0% |
| ! | TAATCTCACAAGCATTATAA+CGG | + | chr8_2:2281484-2281503 | None:intergenic | 25.0% |
| ! | TGAGATTAAATGTCTTAGTT+CGG | - | chr8_2:2281496-2281515 | Msa1227200:intron | 25.0% |
| ! | TTATTGACCTCGATTTAAAA+CGG | - | chr8_2:2281547-2281566 | Msa1227200:intron | 25.0% |
| !! | TTTAAAACGGTTGAATAAAG+TGG | - | chr8_2:2281560-2281579 | Msa1227200:intron | 25.0% |
| ! | TATCACAAAAACATTCTGTA+AGG | + | chr8_2:2281716-2281735 | None:intergenic | 25.0% |
| !! | GTATACAGAAAATTGATAGT+TGG | + | chr8_2:2281809-2281828 | None:intergenic | 25.0% |
| !!! | CTTTCTAAAACATTTACTGT+TGG | - | chr8_2:2281955-2281974 | Msa1227200:CDS | 25.0% |
| ACATAAGAGCAAAATTGTTG+TGG | + | chr8_2:2278197-2278216 | None:intergenic | 30.0% | |
| TTCACATGAAAATCTTTGTC+AGG | + | chr8_2:2278279-2278298 | None:intergenic | 30.0% | |
| AATATTGTTCTCTCTTACAC+TGG | - | chr8_2:2278369-2278388 | Msa1227200:three_prime_UTR | 30.0% | |
| ! | GAAGCACTTGTGATATTATT+TGG | - | chr8_2:2278672-2278691 | Msa1227200:intron | 30.0% |
| TATCAATTCTGTCAGTAGTT+AGG | - | chr8_2:2278784-2278803 | Msa1227200:intron | 30.0% | |
| TTGAGTAACTAACTCCTAAT+TGG | + | chr8_2:2278823-2278842 | None:intergenic | 30.0% | |
| TTAGGAGTTAGTTACTCAAT+TGG | - | chr8_2:2278824-2278843 | Msa1227200:intron | 30.0% | |
| GTTAGAGATTTAGACTCAAA+GGG | + | chr8_2:2278906-2278925 | None:intergenic | 30.0% | |
| TGTTAGAGATTTAGACTCAA+AGG | + | chr8_2:2278907-2278926 | None:intergenic | 30.0% | |
| TTTCATAAGTCTCAGTTACT+GGG | + | chr8_2:2278955-2278974 | None:intergenic | 30.0% | |
| ! | TTTTCATAAGTCTCAGTTAC+TGG | + | chr8_2:2278956-2278975 | None:intergenic | 30.0% |
| CAATCTAAGTAAGACACATT+TGG | + | chr8_2:2279121-2279140 | None:intergenic | 30.0% | |
| CAAATGTGTCTTACTTAGAT+TGG | - | chr8_2:2279119-2279138 | Msa1227200:CDS | 30.0% | |
| ACTTATTTCCTCTTCAGATA+AGG | - | chr8_2:2279253-2279272 | Msa1227200:CDS | 30.0% | |
| TTGAAAACCCATTAACCAAA+TGG | - | chr8_2:2279433-2279452 | Msa1227200:intron | 30.0% | |
| AAAACAGCCATTTGGTTAAT+GGG | + | chr8_2:2279443-2279462 | None:intergenic | 30.0% | |
| AAAAACAGCCATTTGGTTAA+TGG | + | chr8_2:2279444-2279463 | None:intergenic | 30.0% | |
| TGATGATAAAAACAGCCATT+TGG | + | chr8_2:2279451-2279470 | None:intergenic | 30.0% | |
| ! | TACTTTCTAGACTCACATTT+TGG | - | chr8_2:2279622-2279641 | Msa1227200:CDS | 30.0% |
| !! | TGATTTTAGTCTTCTCATGT+CGG | - | chr8_2:2279736-2279755 | Msa1227200:intron | 30.0% |
| TAATTCATGATTTCTGAGCA+AGG | + | chr8_2:2279895-2279914 | None:intergenic | 30.0% | |
| TCATACTAGGTAAATACTAC+CGG | + | chr8_2:2280071-2280090 | None:intergenic | 30.0% | |
| ! | TGATCAGTTTAGTTCATACT+AGG | + | chr8_2:2280084-2280103 | None:intergenic | 30.0% |
| TTTATCTCAACTGATAAGCT+GGG | + | chr8_2:2280205-2280224 | None:intergenic | 30.0% | |
| TATCAGTTGAGATAAAGGTA+TGG | - | chr8_2:2280209-2280228 | Msa1227200:intron | 30.0% | |
| !! | TTAGGCTACATTTTGATGAA+TGG | + | chr8_2:2280371-2280390 | None:intergenic | 30.0% |
| ATCAAAATGTAGCCTAAATG+CGG | - | chr8_2:2280374-2280393 | Msa1227200:CDS | 30.0% | |
| TCAGATATGAATCTTGAAGT+AGG | + | chr8_2:2280407-2280426 | None:intergenic | 30.0% | |
| AGACAAATGATAAAATGCTC+AGG | + | chr8_2:2280562-2280581 | None:intergenic | 30.0% | |
| !! | GCTTAGTTCTAGAAAAATGA+CGG | + | chr8_2:2280612-2280631 | None:intergenic | 30.0% |
| ! | GGCTTTATGAATTCTTTCTT+TGG | + | chr8_2:2280710-2280729 | None:intergenic | 30.0% |
| AGTAGTAAAGAGATCTTTGA+TGG | + | chr8_2:2280731-2280750 | None:intergenic | 30.0% | |
| !! | AATACACGGAAATTGTTTTG+AGG | + | chr8_2:2280754-2280773 | None:intergenic | 30.0% |
| TTAAATGGTTCTCTCATACT+CGG | - | chr8_2:2280775-2280794 | Msa1227200:CDS | 30.0% | |
| TAAATAAGTTCTCTGTGCAT+TGG | + | chr8_2:2280891-2280910 | None:intergenic | 30.0% | |
| CTTGACAATATTGACATAGA+AGG | - | chr8_2:2280973-2280992 | Msa1227200:intron | 30.0% | |
| !! | TGATGATATGTTTTAGACCA+AGG | - | chr8_2:2281163-2281182 | Msa1227200:intron | 30.0% |
| !! | TAAGCAAGCCTTTGATTTTA+AGG | - | chr8_2:2281236-2281255 | Msa1227200:intron | 30.0% |
| TCTGCTTACCTTAAAATCAA+AGG | + | chr8_2:2281247-2281266 | None:intergenic | 30.0% | |
| !!! | TGGTTTAAATTTTTGGTGTC+TGG | - | chr8_2:2281286-2281305 | Msa1227200:intron | 30.0% |
| ATGAACTGAACATATTCGTA+TGG | + | chr8_2:2281316-2281335 | None:intergenic | 30.0% | |
| !!! | TCAGTTCATTTTTGGTTAGT+AGG | - | chr8_2:2281327-2281346 | Msa1227200:intron | 30.0% |
| CCAAGTGTTAAATTGATTGA+AGG | + | chr8_2:2281384-2281403 | None:intergenic | 30.0% | |
| CCTTCAATCAATTTAACACT+TGG | - | chr8_2:2281381-2281400 | Msa1227200:intron | 30.0% | |
| !! | GTTGCTACTTGATTTGTATT+AGG | - | chr8_2:2281518-2281537 | Msa1227200:intron | 30.0% |
| !! | TATTCAACCGTTTTAAATCG+AGG | + | chr8_2:2281557-2281576 | None:intergenic | 30.0% |
| CTATCTTCTTATCTAACTTG+TGG | + | chr8_2:2281593-2281612 | None:intergenic | 30.0% | |
| TTACAAAGAGATGAGCAAAA+TGG | - | chr8_2:2281620-2281639 | Msa1227200:intron | 30.0% | |
| AAAATGGATCATGGAAGAAA+TGG | - | chr8_2:2281636-2281655 | Msa1227200:intron | 30.0% | |
| AAATGGAGATGCAAACTTAT+AGG | - | chr8_2:2281653-2281672 | Msa1227200:intron | 30.0% | |
| AATGGAGATGCAAACTTATA+GGG | - | chr8_2:2281654-2281673 | Msa1227200:intron | 30.0% | |
| GTGAAGCAAAATATTTATGC+AGG | + | chr8_2:2281762-2281781 | None:intergenic | 30.0% | |
| ! | ATGAGGAAACAAATAATGGA+AGG | + | chr8_2:2281903-2281922 | None:intergenic | 30.0% |
| ! | TCTAAAACATTTACTGTTGG+TGG | - | chr8_2:2281958-2281977 | Msa1227200:CDS | 30.0% |
| !! | CAGGTGTTGTTTGATTAAGA+TGG | + | chr8_2:2278138-2278157 | None:intergenic | 35.0% |
| AAGAGCAAAATTGTTGTGGT+TGG | + | chr8_2:2278193-2278212 | None:intergenic | 35.0% | |
| AGAACTTACATAAGAAGGAG+AGG | + | chr8_2:2278397-2278416 | None:intergenic | 35.0% | |
| ATTAATTCCGTAAGCTCTTC+AGG | - | chr8_2:2278742-2278761 | Msa1227200:intron | 35.0% | |
| TTAATTCCGTAAGCTCTTCA+GGG | - | chr8_2:2278743-2278762 | Msa1227200:intron | 35.0% | |
| TCTGAAGAGGAAATAAGTTC+AGG | + | chr8_2:2279251-2279270 | None:intergenic | 35.0% | |
| AGCAATTTCCTTATCTGAAG+AGG | + | chr8_2:2279264-2279283 | None:intergenic | 35.0% | |
| TCTTCAGATAAGGAAATTGC+TGG | - | chr8_2:2279263-2279282 | Msa1227200:CDS | 35.0% | |
| CTTCAGATAAGGAAATTGCT+GGG | - | chr8_2:2279264-2279283 | Msa1227200:CDS | 35.0% | |
| ! | ACATATTTGGAACCAAGCAA+AGG | + | chr8_2:2279317-2279336 | None:intergenic | 35.0% |
| GTTCCAAATATGTTGATGCT+GGG | - | chr8_2:2279324-2279343 | Msa1227200:CDS | 35.0% | |
| TTCCAAATATGTTGATGCTG+GGG | - | chr8_2:2279325-2279344 | Msa1227200:CDS | 35.0% | |
| AGAACAGGAGAAGAATGAAA+CGG | + | chr8_2:2279361-2279380 | None:intergenic | 35.0% | |
| ! | TTGGTGATTTGTATTCCTCA+AGG | + | chr8_2:2279485-2279504 | None:intergenic | 35.0% |
| AGTAAAGATGTTGCATGAGT+AGG | - | chr8_2:2279559-2279578 | Msa1227200:intron | 35.0% | |
| !! | AGTCTAGAAAGTACCAAAAC+AGG | + | chr8_2:2279615-2279634 | None:intergenic | 35.0% |
| CAATGTAATTCAAGCAGTGT+AGG | + | chr8_2:2279955-2279974 | None:intergenic | 35.0% | |
| !!! | TTCATATTTTAACCAACGGG+AGG | + | chr8_2:2279978-2279997 | None:intergenic | 35.0% |
| ! | CTGACTAGTTAGTGTATGTA+TGG | + | chr8_2:2280125-2280144 | None:intergenic | 35.0% |
| CATACATACACTAACTAGTC+AGG | - | chr8_2:2280123-2280142 | Msa1227200:intron | 35.0% | |
| TAAGCTTCGTGTTTCATTTC+AGG | - | chr8_2:2280163-2280182 | Msa1227200:intron | 35.0% | |
| ! | TGTTTCATTTCAGGTAGTCA+AGG | - | chr8_2:2280172-2280191 | Msa1227200:intron | 35.0% |
| TTATCTCAACTGATAAGCTG+GGG | + | chr8_2:2280204-2280223 | None:intergenic | 35.0% | |
| CTTTATCTCAACTGATAAGC+TGG | + | chr8_2:2280206-2280225 | None:intergenic | 35.0% | |
| CAGCTTATCAGTTGAGATAA+AGG | - | chr8_2:2280204-2280223 | Msa1227200:intron | 35.0% | |
| AAATCAAGCCAAAGACAAAG+AGG | + | chr8_2:2280332-2280351 | None:intergenic | 35.0% | |
| TATGTCTTCAGATTTCAGAG+CGG | - | chr8_2:2280650-2280669 | Msa1227200:intron | 35.0% | |
| ! | TGAAAGTACAGATGCATCTA+TGG | - | chr8_2:2280816-2280835 | Msa1227200:CDS | 35.0% |
| GGAAAGCTTGAGAATTGTAA+AGG | - | chr8_2:2281104-2281123 | Msa1227200:intron | 35.0% | |
| !! | ATGTTTTAGACCAAGGAAAG+AGG | - | chr8_2:2281170-2281189 | Msa1227200:intron | 35.0% |
| CTCAAGATATACAGTATCGT+AGG | + | chr8_2:2281211-2281230 | None:intergenic | 35.0% | |
| !! | TTTTGGTTAGTAGGTCTTGA+CGG | - | chr8_2:2281336-2281355 | Msa1227200:intron | 35.0% |
| !! | TTAAGATGGACTGCATGCAA+TGG | + | chr8_2:2278124-2278143 | None:intergenic | 40.0% |
| ! | GCTCTTATGTTTGAAACGCA+TGG | - | chr8_2:2278207-2278226 | Msa1227200:three_prime_UTR | 40.0% |
| TGAAGAAGATGCAGCTCATT+GGG | - | chr8_2:2278323-2278342 | Msa1227200:three_prime_UTR | 40.0% | |
| CATTGGGTTTATAGAGGTGA+AGG | - | chr8_2:2278339-2278358 | Msa1227200:three_prime_UTR | 40.0% | |
| GCAAGCACGTTAGATCTATT+TGG | - | chr8_2:2278620-2278639 | Msa1227200:intron | 40.0% | |
| GGTTCCAAATATGTTGATGC+TGG | - | chr8_2:2279323-2279342 | Msa1227200:CDS | 40.0% | |
| TACCCCAGCATCAACATATT+TGG | + | chr8_2:2279330-2279349 | None:intergenic | 40.0% | |
| ! | CTCAGACATTGATCTAGAAC+AGG | + | chr8_2:2279376-2279395 | None:intergenic | 40.0% |
| !! | GAAAGTACCAAAACAGGTAC+AGG | + | chr8_2:2279609-2279628 | None:intergenic | 40.0% |
| GATCATTCAATCTTCCCTCA+AGG | - | chr8_2:2279758-2279777 | Msa1227200:intron | 40.0% | |
| TTCAATCTTCCCTCAAGGTA+TGG | - | chr8_2:2279763-2279782 | Msa1227200:intron | 40.0% | |
| GTCTCAAAACCATACCTTGA+GGG | + | chr8_2:2279775-2279794 | None:intergenic | 40.0% | |
| TGTCTCAAAACCATACCTTG+AGG | + | chr8_2:2279776-2279795 | None:intergenic | 40.0% | |
| TTCATTCTGAATGCTGTCTC+CGG | - | chr8_2:2280049-2280068 | Msa1227200:intron | 40.0% | |
| GTAGGAAGAAATCCGCATTT+AGG | + | chr8_2:2280389-2280408 | None:intergenic | 40.0% | |
| CTGAAGAAACTGCTATCAAG+AGG | - | chr8_2:2280423-2280442 | Msa1227200:CDS | 40.0% | |
| AAGAAACTGCTATCAAGAGG+AGG | - | chr8_2:2280426-2280445 | Msa1227200:CDS | 40.0% | |
| !! | CAAGCTCTGAAATTGCAACA+TGG | - | chr8_2:2280470-2280489 | Msa1227200:intron | 40.0% |
| ! | TCTGAAATTGCAACATGGAG+AGG | - | chr8_2:2280475-2280494 | Msa1227200:intron | 40.0% |
| ACTTGAAGATGAACTTCAGC+CGG | - | chr8_2:2280846-2280865 | Msa1227200:CDS | 40.0% | |
| ! | AAGGACTCCTGATTTTTGCA+CGG | + | chr8_2:2280929-2280948 | None:intergenic | 40.0% |
| CATTACTTCTCAACAGAGCA+TGG | - | chr8_2:2281017-2281036 | Msa1227200:intron | 40.0% | |
| ! | TTTTAGACCAAGGAAAGAGG+AGG | - | chr8_2:2281173-2281192 | Msa1227200:intron | 40.0% |
| TTTAGACCAAGGAAAGAGGA+GGG | - | chr8_2:2281174-2281193 | Msa1227200:intron | 40.0% | |
| GAGATGAGCAAAATGGATCA+TGG | - | chr8_2:2281627-2281646 | Msa1227200:intron | 40.0% | |
| AAGTCTCAGTATGCAACTTC+AGG | + | chr8_2:2281681-2281700 | None:intergenic | 40.0% | |
| TGGTATTCTGCATGATGCAT+TGG | - | chr8_2:2281978-2281997 | Msa1227200:CDS | 40.0% | |
| TATTCTGCATGATGCATTGG+AGG | - | chr8_2:2281981-2282000 | Msa1227200:CDS | 40.0% | |
| ATTCTGCATGATGCATTGGA+GGG | - | chr8_2:2281982-2282001 | Msa1227200:CDS | 40.0% | |
| CAAACAACACCTGATCACAG+AGG | - | chr8_2:2278145-2278164 | Msa1227200:three_prime_UTR | 45.0% | |
| CTGAAGAAGATGCAGCTCAT+TGG | - | chr8_2:2278322-2278341 | Msa1227200:three_prime_UTR | 45.0% | |
| GCAGCTCATTGGGTTTATAG+AGG | - | chr8_2:2278333-2278352 | Msa1227200:three_prime_UTR | 45.0% | |
| AAGCAACCCTGAAGAGCTTA+CGG | + | chr8_2:2278752-2278771 | None:intergenic | 45.0% | |
| TTACTGGGATCATCAGGAGA+GGG | + | chr8_2:2278940-2278959 | None:intergenic | 45.0% | |
| TCTCAGTTACTGGGATCATC+AGG | + | chr8_2:2278946-2278965 | None:intergenic | 45.0% | |
| TTCATGTGGAGTCAGAGCTA+TGG | + | chr8_2:2279207-2279226 | None:intergenic | 45.0% | |
| !! | TAGCTCTGACTCCACATGAA+CGG | - | chr8_2:2279207-2279226 | Msa1227200:CDS | 45.0% |
| CATGTCATGAAGCCTTTGCT+TGG | - | chr8_2:2279302-2279321 | Msa1227200:CDS | 45.0% | |
| ATCACTCTGTGCTTACCTTG+AGG | - | chr8_2:2279467-2279486 | Msa1227200:intron | 45.0% | |
| ! | TCTCTGACCTGTACCTGTTT+TGG | - | chr8_2:2279599-2279618 | Msa1227200:intron | 45.0% |
| !! | GACTCACATTTTGGTGACCA+AGG | - | chr8_2:2279631-2279650 | Msa1227200:CDS | 45.0% |
| GACCAAGGAATTCCTTGAGA+CGG | - | chr8_2:2279646-2279665 | Msa1227200:CDS | 45.0% | |
| AACCGTCTCAAGGAATTCCT+TGG | + | chr8_2:2279651-2279670 | None:intergenic | 45.0% | |
| CATTCTTCTCAACCGTCTCA+AGG | + | chr8_2:2279661-2279680 | None:intergenic | 45.0% | |
| !! | TGGGCGAGTTGATGTTTCAA+GGG | - | chr8_2:2279700-2279719 | Msa1227200:intron | 45.0% |
| TGAATTACATTGCCTCCCGT+TGG | - | chr8_2:2279963-2279982 | Msa1227200:intron | 45.0% | |
| AGACAAAGAGGAAGAGGGAA+GGG | + | chr8_2:2280320-2280339 | None:intergenic | 45.0% | |
| AAGACAAAGAGGAAGAGGGA+AGG | + | chr8_2:2280321-2280340 | None:intergenic | 45.0% | |
| TCCCTCTTCCTCTTTGTCTT+TGG | - | chr8_2:2280321-2280340 | Msa1227200:CDS | 45.0% | |
| GCCAAAGACAAAGAGGAAGA+GGG | + | chr8_2:2280325-2280344 | None:intergenic | 45.0% | |
| AGCCAAAGACAAAGAGGAAG+AGG | + | chr8_2:2280326-2280345 | None:intergenic | 45.0% | |
| ATCCAGAGAACAGATCGAGT+GGG | + | chr8_2:2280687-2280706 | None:intergenic | 45.0% | |
| AATGGTTCTCTCATACTCGG+AGG | - | chr8_2:2280778-2280797 | Msa1227200:CDS | 45.0% | |
| ATGGTTCTCTCATACTCGGA+GGG | - | chr8_2:2280779-2280798 | Msa1227200:CDS | 45.0% | |
| CCATCATCAGCTTGAATGAC+CGG | + | chr8_2:2280868-2280887 | None:intergenic | 45.0% | |
| ACTGAAGCCGTGCAAAAATC+AGG | - | chr8_2:2280919-2280938 | Msa1227200:CDS | 45.0% | |
| AGTCCTTGATAAGCTCCTTG+AGG | - | chr8_2:2280942-2280961 | Msa1227200:intron | 45.0% | |
| GAACCTCAAGGAGCTTATCA+AGG | + | chr8_2:2280948-2280967 | None:intergenic | 45.0% | |
| TGTCAAGCTTCTGAACCTCA+AGG | + | chr8_2:2280960-2280979 | None:intergenic | 45.0% | |
| CAGTGATGCAGAATGCAAAG+AGG | + | chr8_2:2281082-2281101 | None:intergenic | 45.0% | |
| CTCTTTGCATTCTGCATCAC+TGG | - | chr8_2:2281080-2281099 | Msa1227200:intron | 45.0% | |
| TTTGCATTCTGCATCACTGG+AGG | - | chr8_2:2281083-2281102 | Msa1227200:intron | 45.0% | |
| ! | CTTTTGCAGTTGCTGCTATC+AGG | + | chr8_2:2281134-2281153 | None:intergenic | 45.0% |
| CGTTGTGTTCCTCTGTGATC+AGG | + | chr8_2:2278157-2278176 | None:intergenic | 50.0% | |
| TCACAGAGGAACACAACGCA+AGG | - | chr8_2:2278159-2278178 | Msa1227200:three_prime_UTR | 50.0% | |
| GTTACTGGGATCATCAGGAG+AGG | + | chr8_2:2278941-2278960 | None:intergenic | 50.0% | |
| CATTCGCAAGTCTCCAAGGA+AGG | - | chr8_2:2279154-2279173 | Msa1227200:CDS | 50.0% | |
| !! | TGCAACGCTGATTCCTTCCT+TGG | + | chr8_2:2279170-2279189 | None:intergenic | 50.0% |
| AGGAAGGAATCAGCGTTGCA+AGG | - | chr8_2:2279170-2279189 | Msa1227200:CDS | 50.0% | |
| AATCAGCGTTGCAAGGAGTG+AGG | - | chr8_2:2279177-2279196 | Msa1227200:CDS | 50.0% | |
| TTCCAGATGAGCCGTTCATG+TGG | + | chr8_2:2279221-2279240 | None:intergenic | 50.0% | |
| TTACTAGTCAACGCCCTGCT+GGG | - | chr8_2:2279681-2279700 | Msa1227200:CDS | 50.0% | |
| AAACATCAACTCGCCCAGCA+GGG | + | chr8_2:2279697-2279716 | None:intergenic | 50.0% | |
| !! | CTGGGCGAGTTGATGTTTCA+AGG | - | chr8_2:2279699-2279718 | Msa1227200:intron | 50.0% |
| AACCCACTCGATCTGTTCTC+TGG | - | chr8_2:2280682-2280701 | Msa1227200:intron | 50.0% | |
| GATCCAGAGAACAGATCGAG+TGG | + | chr8_2:2280688-2280707 | None:intergenic | 50.0% | |
| CCGGTCATTCAAGCTGATGA+TGG | - | chr8_2:2280865-2280884 | Msa1227200:CDS | 50.0% | |
| GAGCATGGCGCGTAAAGAAT+TGG | - | chr8_2:2281032-2281051 | Msa1227200:intron | 50.0% | |
| CTACCCTCCTCACATGCTAT+TGG | - | chr8_2:2281781-2281800 | Msa1227200:intron | 50.0% | |
| GGACCAATAGCATGTGAGGA+GGG | + | chr8_2:2281787-2281806 | None:intergenic | 50.0% | |
| GTTGGGACCAATAGCATGTG+AGG | + | chr8_2:2281791-2281810 | None:intergenic | 50.0% | |
| TGGGATCATCAGGAGAGGGA+AGG | + | chr8_2:2278936-2278955 | None:intergenic | 55.0% | |
| TGCGCATTCGCAAGTCTCCA+AGG | - | chr8_2:2279150-2279169 | Msa1227200:CDS | 55.0% | |
| CTCCACATGAACGGCTCATC+TGG | - | chr8_2:2279216-2279235 | Msa1227200:CDS | 55.0% | |
| GTTACTAGTCAACGCCCTGC+TGG | - | chr8_2:2279680-2279699 | Msa1227200:CDS | 55.0% | |
| GAAACATCAACTCGCCCAGC+AGG | + | chr8_2:2279698-2279717 | None:intergenic | 55.0% | |
| TCTCTCATACTCGGAGGGCT+TGG | - | chr8_2:2280784-2280803 | Msa1227200:CDS | 55.0% | |
| CCAGAACCCTCCTCTTTCCT+TGG | + | chr8_2:2281183-2281202 | None:intergenic | 55.0% | |
| CCAAGGAAAGAGGAGGGTTC+TGG | - | chr8_2:2281180-2281199 | Msa1227200:intron | 55.0% | |
| GGGACCAATAGCATGTGAGG+AGG | + | chr8_2:2281788-2281807 | None:intergenic | 55.0% | |
| CTGCATGATGCATTGGAGGG+TGG | - | chr8_2:2281985-2282004 | Msa1227200:CDS | 55.0% | |
| CTCATACTCGGAGGGCTTGG+AGG | - | chr8_2:2280787-2280806 | Msa1227200:CDS | 60.0% | |
| ATACTCGGAGGGCTTGGAGG+TGG | - | chr8_2:2280790-2280809 | Msa1227200:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 2278076 | 2282021 | 2278076 | ID=Msa1227200;Name=Msa1227200 |
| chr8_2 | mRNA | 2278076 | 2282021 | 2278076 | ID=Msa1227200-mRNA-1;Parent=Msa1227200;Name=Msa1227200-mRNA-1;_AED=0.07;_eAED=0.07;_QI=12|0.71|0.75|1|1|1|8|347|478 |
| chr8_2 | exon | 2278076 | 2278557 | 2278076 | ID=Msa1227200-mRNA-1:exon:566;Parent=Msa1227200-mRNA-1 |
| chr8_2 | exon | 2278840 | 2279436 | 2278840 | ID=Msa1227200-mRNA-1:exon:565;Parent=Msa1227200-mRNA-1 |
| chr8_2 | exon | 2279601 | 2279711 | 2279601 | ID=Msa1227200-mRNA-1:exon:564;Parent=Msa1227200-mRNA-1 |
| chr8_2 | exon | 2279872 | 2279912 | 2279872 | ID=Msa1227200-mRNA-1:exon:563;Parent=Msa1227200-mRNA-1 |
| chr8_2 | exon | 2280318 | 2280465 | 2280318 | ID=Msa1227200-mRNA-1:exon:562;Parent=Msa1227200-mRNA-1 |
| chr8_2 | exon | 2280751 | 2280960 | 2280751 | ID=Msa1227200-mRNA-1:exon:561;Parent=Msa1227200-mRNA-1 |
| chr8_2 | exon | 2281690 | 2281791 | 2281690 | ID=Msa1227200-mRNA-1:exon:560;Parent=Msa1227200-mRNA-1 |
| chr8_2 | exon | 2281917 | 2282021 | 2281917 | ID=Msa1227200-mRNA-1:exon:559;Parent=Msa1227200-mRNA-1 |
| chr8_2 | five_prime_UTR | 2282010 | 2282021 | 2282010 | ID=Msa1227200-mRNA-1:five_prime_utr;Parent=Msa1227200-mRNA-1 |
| chr8_2 | CDS | 2281917 | 2282009 | 2281917 | ID=Msa1227200-mRNA-1:cds;Parent=Msa1227200-mRNA-1 |
| chr8_2 | CDS | 2281690 | 2281791 | 2281690 | ID=Msa1227200-mRNA-1:cds;Parent=Msa1227200-mRNA-1 |
| chr8_2 | CDS | 2280751 | 2280960 | 2280751 | ID=Msa1227200-mRNA-1:cds;Parent=Msa1227200-mRNA-1 |
| chr8_2 | CDS | 2280318 | 2280465 | 2280318 | ID=Msa1227200-mRNA-1:cds;Parent=Msa1227200-mRNA-1 |
| chr8_2 | CDS | 2279872 | 2279912 | 2279872 | ID=Msa1227200-mRNA-1:cds;Parent=Msa1227200-mRNA-1 |
| chr8_2 | CDS | 2279601 | 2279711 | 2279601 | ID=Msa1227200-mRNA-1:cds;Parent=Msa1227200-mRNA-1 |
| chr8_2 | CDS | 2278840 | 2279436 | 2278840 | ID=Msa1227200-mRNA-1:cds;Parent=Msa1227200-mRNA-1 |
| chr8_2 | CDS | 2278423 | 2278557 | 2278423 | ID=Msa1227200-mRNA-1:cds;Parent=Msa1227200-mRNA-1 |
| chr8_2 | three_prime_UTR | 2278076 | 2278422 | 2278076 | ID=Msa1227200-mRNA-1:three_prime_utr;Parent=Msa1227200-mRNA-1 |
| Gene Sequence |
| Protein sequence |
