Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1385640 | XP_013466139.1 | 96.862 | 478 | 15 | 0 | 1 | 478 | 1 | 478 | 0.0 | 964 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1385640 | sp|Q93YN9|IPPK_ARATH | 53.636 | 440 | 201 | 2 | 32 | 470 | 1 | 438 | 6.69e-162 | 468 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1385640 | A0A072VDS9 | 96.862 | 478 | 15 | 0 | 1 | 478 | 1 | 478 | 0.0 | 964 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003440 | Msa1385640 | 0.809396 | 1.931554e-50 | -8.615850e-47 |
| Msa0146500 | Msa1385640 | 0.859336 | 4.437401e-63 | -8.615850e-47 |
| Msa1227200 | Msa1385640 | 0.975424 | 6.289680e-140 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1385640 | MtrunA17_Chr1g0155511 | 96.862 | 478 | 15 | 0 | 1 | 478 | 1 | 478 | 0.0 | 964 |
| Msa1385640 | MtrunA17_Chr3g0141811 | 69.841 | 441 | 133 | 0 | 32 | 472 | 1 | 441 | 0.0 | 654 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1385640 | AT1G22100.1 | 54.587 | 436 | 191 | 3 | 33 | 467 | 3 | 432 | 9.93e-164 | 470 |
| Msa1385640 | AT5G42810.1 | 53.636 | 440 | 201 | 2 | 32 | 470 | 1 | 438 | 6.80e-163 | 468 |
| Msa1385640 | AT1G59312.2 | 49.327 | 446 | 216 | 6 | 33 | 471 | 3 | 445 | 1.08e-143 | 419 |
| Msa1385640 | AT1G58643.2 | 49.327 | 446 | 216 | 6 | 33 | 471 | 3 | 445 | 1.08e-143 | 419 |
| Msa1385640 | AT1G59312.1 | 49.776 | 446 | 214 | 7 | 33 | 471 | 38 | 480 | 2.44e-143 | 420 |
| Msa1385640 | AT1G58936.1 | 49.776 | 446 | 214 | 7 | 33 | 471 | 38 | 480 | 2.44e-143 | 420 |
| Msa1385640 | AT1G58643.1 | 49.776 | 446 | 214 | 7 | 33 | 471 | 38 | 480 | 2.44e-143 | 420 |
Find 115 sgRNAs with CRISPR-Local
Find 230 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACTTTCTAGACTCACATTT+TGG | 0.211675 | tig0020764:+116317 | Msa1385640:intron |
| GGCTTTATGAATTCTTTCTT+TGG | 0.242124 | tig0020764:-117402 | None:intergenic |
| TACCCCAGCATCAACATATT+TGG | 0.257064 | tig0020764:-116022 | None:intergenic |
| AAATGGAGATGCAAACTTAT+AGG | 0.304541 | tig0020764:+118348 | Msa1385640:CDS |
| CTCCACATGAACGGCTCATC+TGG | 0.312520 | tig0020764:+115911 | Msa1385640:CDS |
| CAGCTTATCAGTTGAGATAA+AGG | 0.331799 | tig0020764:+116899 | Msa1385640:CDS |
| TGCAACGCTGATTCCTTCCT+TGG | 0.337708 | tig0020764:-115862 | None:intergenic |
| AATGGAGATGCAAACTTATA+GGG | 0.348706 | tig0020764:+118349 | Msa1385640:CDS |
| CCAAGGAAAGAGGAGGGTTC+TGG | 0.359741 | tig0020764:+117875 | Msa1385640:CDS |
| AATATTGTTCTCTCTTACAC+TGG | 0.362819 | tig0020764:+115064 | Msa1385640:CDS |
| CTGGGCGAGTTGATGTTTCA+AGG | 0.365906 | tig0020764:+116394 | Msa1385640:CDS |
| GTAGGAAGAAATCCGCATTT+AGG | 0.391832 | tig0020764:-117081 | None:intergenic |
| CTCTTTGCATTCTGCATCAC+TGG | 0.393035 | tig0020764:+117775 | Msa1385640:CDS |
| AAGTCTCAGTATGCAACTTC+AGG | 0.393468 | tig0020764:-118373 | None:intergenic |
| CCAGAACCCTCCTCTTTCCT+TGG | 0.396286 | tig0020764:-117875 | None:intergenic |
| TTACAAAGAGATGAGCAAAA+TGG | 0.397598 | tig0020764:+118315 | Msa1385640:CDS |
| GAGCATGGCGCGTAAAGAAT+TGG | 0.400860 | tig0020764:+117727 | Msa1385640:CDS |
| AGTAGTAAAGAGATCTTTGA+TGG | 0.402587 | tig0020764:-117423 | None:intergenic |
| GGTTCCAAATATGTTGATGC+TGG | 0.410935 | tig0020764:+116018 | Msa1385640:CDS |
| TTTATGAGTTATCATATATG+AGG | 0.412078 | tig0020764:-118612 | None:intergenic |
| TGAAGAAGATGCAGCTCATT+GGG | 0.412372 | tig0020764:+115018 | Msa1385640:CDS |
| AAAATGGATCATGGAAGAAA+TGG | 0.413794 | tig0020764:+118331 | Msa1385640:CDS |
| CTGAAGAAGATGCAGCTCAT+TGG | 0.417078 | tig0020764:+115017 | Msa1385640:CDS |
| CTTTATCTCAACTGATAAGC+TGG | 0.418788 | tig0020764:-116898 | None:intergenic |
| TCTCTCATACTCGGAGGGCT+TGG | 0.418888 | tig0020764:+117479 | Msa1385640:CDS |
| TGAAAGTACAGATGCATCTA+TGG | 0.423587 | tig0020764:+117511 | Msa1385640:CDS |
| AACCCACTCGATCTGTTCTC+TGG | 0.426001 | tig0020764:+117377 | Msa1385640:CDS |
| TTATTATGTGTTGAATTAAG+AGG | 0.426406 | tig0020764:-114791 | None:intergenic |
| ATATATGAGGAAACAAATAA+TGG | 0.426540 | tig0020764:-118599 | None:intergenic |
| CTCATACTCGGAGGGCTTGG+AGG | 0.427893 | tig0020764:+117482 | Msa1385640:CDS |
| CTACCCTCCTCACATGCTAT+TGG | 0.428346 | tig0020764:+118476 | Msa1385640:three_prime_UTR |
| GTTACTAGTCAACGCCCTGC+TGG | 0.430195 | tig0020764:+116375 | Msa1385640:CDS |
| CGTTGTGTTCCTCTGTGATC+AGG | 0.433813 | tig0020764:-114849 | None:intergenic |
| TCTAAAACATTTACTGTTGG+TGG | 0.434065 | tig0020764:+118653 | Msa1385640:three_prime_UTR |
| TCTTCAGATAAGGAAATTGC+TGG | 0.438795 | tig0020764:+115958 | Msa1385640:CDS |
| CAAAATAATTATGCAAAAGA+TGG | 0.440358 | tig0020764:-118539 | None:intergenic |
| TATACAGAAAATTGATAGTT+GGG | 0.446477 | tig0020764:-118500 | None:intergenic |
| CATGTCATGAAGCCTTTGCT+TGG | 0.452650 | tig0020764:+115997 | Msa1385640:CDS |
| CAGGTGTTGTTTGATTAAGA+TGG | 0.453937 | tig0020764:-114830 | None:intergenic |
| CTTGACAATATTGACATAGA+AGG | 0.455818 | tig0020764:+117668 | Msa1385640:CDS |
| ACTTATTTCCTCTTCAGATA+AGG | 0.460694 | tig0020764:+115948 | Msa1385640:CDS |
| TTTAAAACGGTTGAATAAAG+TGG | 0.467422 | tig0020764:+118255 | Msa1385640:CDS |
| GAAACATCAACTCGCCCAGC+AGG | 0.473865 | tig0020764:-116390 | None:intergenic |
| GTATACAGAAAATTGATAGT+TGG | 0.485821 | tig0020764:-118501 | None:intergenic |
| TCAGATATGAATCTTGAAGT+AGG | 0.485966 | tig0020764:-117099 | None:intergenic |
| TCTGCTTACCTTAAAATCAA+AGG | 0.487614 | tig0020764:-117939 | None:intergenic |
| GCAGCTCATTGGGTTTATAG+AGG | 0.490643 | tig0020764:+115028 | Msa1385640:CDS |
| CTTTCTAAAACATTTACTGT+TGG | 0.491748 | tig0020764:+118650 | Msa1385640:three_prime_UTR |
| CCATCATCAGCTTGAATGAC+CGG | 0.498277 | tig0020764:-117560 | None:intergenic |
| TTATTGACCTCGATTTAAAA+CGG | 0.501967 | tig0020764:+118242 | Msa1385640:CDS |
| GTGAAGCAAAATATTTATGC+AGG | 0.504797 | tig0020764:-118454 | None:intergenic |
| TCTGAAGAGGAAATAAGTTC+AGG | 0.504962 | tig0020764:-115943 | None:intergenic |
| AGCAATTTCCTTATCTGAAG+AGG | 0.506496 | tig0020764:-115956 | None:intergenic |
| AACCGTCTCAAGGAATTCCT+TGG | 0.514592 | tig0020764:-116343 | None:intergenic |
| GAGATGAGCAAAATGGATCA+TGG | 0.515742 | tig0020764:+118322 | Msa1385640:CDS |
| TATTATGTGTTGAATTAAGA+GGG | 0.518245 | tig0020764:-114790 | None:intergenic |
| GGAAAGCTTGAGAATTGTAA+AGG | 0.520521 | tig0020764:+117799 | Msa1385640:CDS |
| GTCTCAAAACCATACCTTGA+GGG | 0.523276 | tig0020764:-116467 | None:intergenic |
| TTAAATGGTTCTCTCATACT+CGG | 0.530482 | tig0020764:+117470 | Msa1385640:CDS |
| TTTATCTCAACTGATAAGCT+GGG | 0.534076 | tig0020764:-116897 | None:intergenic |
| GTTCCAAATATGTTGATGCT+GGG | 0.535103 | tig0020764:+116019 | Msa1385640:CDS |
| GAACCTCAAGGAGCTTATCA+AGG | 0.536139 | tig0020764:-117640 | None:intergenic |
| CCGGTCATTCAAGCTGATGA+TGG | 0.539433 | tig0020764:+117560 | Msa1385640:CDS |
| TATTCTGCATGATGCATTGG+AGG | 0.539828 | tig0020764:+118676 | Msa1385640:three_prime_UTR |
| TAAATAAGTTCTCTGTGCAT+TGG | 0.540290 | tig0020764:-117583 | None:intergenic |
| ATACTCGGAGGGCTTGGAGG+TGG | 0.540855 | tig0020764:+117485 | Msa1385640:CDS |
| CATTGGGTTTATAGAGGTGA+AGG | 0.550198 | tig0020764:+115034 | Msa1385640:CDS |
| TTACTAGTCAACGCCCTGCT+GGG | 0.550972 | tig0020764:+116376 | Msa1385640:CDS |
| CATTCTTCTCAACCGTCTCA+AGG | 0.551150 | tig0020764:-116353 | None:intergenic |
| TGTTTCATTTCAGGTAGTCA+AGG | 0.559197 | tig0020764:+116867 | Msa1385640:intron |
| CTATCTTCTTATCTAACTTG+TGG | 0.562101 | tig0020764:-118285 | None:intergenic |
| TGGTATTCTGCATGATGCAT+TGG | 0.566995 | tig0020764:+118673 | Msa1385640:three_prime_UTR |
| ATGAGGAAACAAATAATGGA+AGG | 0.577913 | tig0020764:-118595 | None:intergenic |
| ACTTGAAGATGAACTTCAGC+CGG | 0.579402 | tig0020764:+117541 | Msa1385640:CDS |
| ATGGTTCTCTCATACTCGGA+GGG | 0.583585 | tig0020764:+117474 | Msa1385640:CDS |
| ACATATTTGGAACCAAGCAA+AGG | 0.590042 | tig0020764:-116009 | None:intergenic |
| TGGGCGAGTTGATGTTTCAA+GGG | 0.590970 | tig0020764:+116395 | Msa1385640:CDS |
| TTCATGTGGAGTCAGAGCTA+TGG | 0.596545 | tig0020764:-115899 | None:intergenic |
| CATTCGCAAGTCTCCAAGGA+AGG | 0.599728 | tig0020764:+115849 | Msa1385640:CDS |
| ATCAAAATGTAGCCTAAATG+CGG | 0.601221 | tig0020764:+117069 | Msa1385640:intron |
| TTTGCATTCTGCATCACTGG+AGG | 0.601325 | tig0020764:+117778 | Msa1385640:CDS |
| TCTGAAATTGCAACATGGAG+AGG | 0.602662 | tig0020764:+117170 | Msa1385640:CDS |
| TTCCAGATGAGCCGTTCATG+TGG | 0.604622 | tig0020764:-115913 | None:intergenic |
| TGCGCATTCGCAAGTCTCCA+AGG | 0.605257 | tig0020764:+115845 | Msa1385640:CDS |
| GACCAAGGAATTCCTTGAGA+CGG | 0.607660 | tig0020764:+116341 | Msa1385640:CDS |
| GATCATTCAATCTTCCCTCA+AGG | 0.608947 | tig0020764:+116453 | Msa1385640:CDS |
| CTGAAGAAACTGCTATCAAG+AGG | 0.610082 | tig0020764:+117118 | Msa1385640:CDS |
| AGGAAGGAATCAGCGTTGCA+AGG | 0.612808 | tig0020764:+115865 | Msa1385640:CDS |
| CTCAAGATATACAGTATCGT+AGG | 0.616260 | tig0020764:-117903 | None:intergenic |
| CATTACTTCTCAACAGAGCA+TGG | 0.616815 | tig0020764:+117712 | Msa1385640:CDS |
| TAGCTCTGACTCCACATGAA+CGG | 0.620751 | tig0020764:+115902 | Msa1385640:CDS |
| TTTAGACCAAGGAAAGAGGA+GGG | 0.622681 | tig0020764:+117869 | Msa1385640:CDS |
| CTTCAGATAAGGAAATTGCT+GGG | 0.625703 | tig0020764:+115959 | Msa1385640:CDS |
| AAGAAACTGCTATCAAGAGG+AGG | 0.628067 | tig0020764:+117121 | Msa1385640:CDS |
| GTTGGGACCAATAGCATGTG+AGG | 0.633773 | tig0020764:-118483 | None:intergenic |
| TGTCAAGCTTCTGAACCTCA+AGG | 0.634666 | tig0020764:-117652 | None:intergenic |
| AGAACTTACATAAGAAGGAG+AGG | 0.634781 | tig0020764:-115089 | None:intergenic |
| GGACCAATAGCATGTGAGGA+GGG | 0.635570 | tig0020764:-118479 | None:intergenic |
| GATCCAGAGAACAGATCGAG+TGG | 0.637943 | tig0020764:-117380 | None:intergenic |
| AATCAGCGTTGCAAGGAGTG+AGG | 0.642103 | tig0020764:+115872 | Msa1385640:CDS |
| CAGTGATGCAGAATGCAAAG+AGG | 0.642291 | tig0020764:-117774 | None:intergenic |
| AGTCCTTGATAAGCTCCTTG+AGG | 0.646197 | tig0020764:+117637 | Msa1385640:CDS |
| CAAGCTCTGAAATTGCAACA+TGG | 0.647998 | tig0020764:+117165 | Msa1385640:CDS |
| GGGACCAATAGCATGTGAGG+AGG | 0.649926 | tig0020764:-118480 | None:intergenic |
| TTCCAAATATGTTGATGCTG+GGG | 0.654226 | tig0020764:+116020 | Msa1385640:CDS |
| AAACATCAACTCGCCCAGCA+GGG | 0.655838 | tig0020764:-116389 | None:intergenic |
| TCACAGAGGAACACAACGCA+AGG | 0.662619 | tig0020764:+114854 | Msa1385640:CDS |
| TTATCTCAACTGATAAGCTG+GGG | 0.664084 | tig0020764:-116896 | None:intergenic |
| AATGGTTCTCTCATACTCGG+AGG | 0.667393 | tig0020764:+117473 | Msa1385640:CDS |
| ATTCTGCATGATGCATTGGA+GGG | 0.667493 | tig0020764:+118677 | Msa1385640:three_prime_UTR |
| CTGCATGATGCATTGGAGGG+TGG | 0.681813 | tig0020764:+118680 | Msa1385640:three_prime_UTR |
| ATCCAGAGAACAGATCGAGT+GGG | 0.685169 | tig0020764:-117379 | None:intergenic |
| TTAAGATGGACTGCATGCAA+TGG | 0.702726 | tig0020764:-114816 | None:intergenic |
| CAAACAACACCTGATCACAG+AGG | 0.769583 | tig0020764:+114840 | Msa1385640:CDS |
| TATGTCTTCAGATTTCAGAG+CGG | 0.776737 | tig0020764:+117345 | Msa1385640:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCAAAAAATGTTTTTTTTTA+AGG | + | tig0020764:115155-115174 | Msa1385640:intron | 10.0% |
| !!! | CTTTATTTTTTCTTTTATTA+TGG | + | tig0020764:115701-115720 | Msa1385640:intron | 10.0% |
| !!! | AATTTTTCTATTGATAAAAA+CGG | + | tig0020764:116198-116217 | Msa1385640:intron | 10.0% |
| !!! | TTATTATTGGTTTAAATTTT+TGG | + | tig0020764:117974-117993 | Msa1385640:intron | 10.0% |
| !! | AAAGAAAAAATAAAGTCAAA+CGG | - | tig0020764:115696-115715 | None:intergenic | 15.0% |
| !!! | GTTTTTATCAATAGAAAAAT+TGG | - | tig0020764:116199-116218 | None:intergenic | 15.0% |
| !! | AACTAATGATATTCTTTAAT+GGG | - | tig0020764:116970-116989 | None:intergenic | 15.0% |
| !! | AAACTAATGATATTCTTTAA+TGG | - | tig0020764:116971-116990 | None:intergenic | 15.0% |
| !! | AAATTTCCAGTTATTATTAT+TGG | + | tig0020764:117961-117980 | Msa1385640:intron | 15.0% |
| !! | TTTAAACCAATAATAATAAC+TGG | - | tig0020764:117970-117989 | None:intergenic | 15.0% |
| !!! | TTTTTTGTAGATAAAGATAA+GGG | - | tig0020764:118150-118169 | None:intergenic | 15.0% |
| !! | TATTATGTGTTGAATTAAGA+GGG | - | tig0020764:114793-114812 | None:intergenic | 20.0% |
| !! | TTATTATGTGTTGAATTAAG+AGG | - | tig0020764:114794-114813 | None:intergenic | 20.0% |
| !! | AAAAAAGAACTTACATAAGA+AGG | - | tig0020764:115097-115116 | None:intergenic | 20.0% |
| !!! | ATATGTCTATAAACTGTTTT+CGG | + | tig0020764:115414-115433 | Msa1385640:intron | 20.0% |
| !!! | ACAAGAACTTTTCTATTAAT+AGG | - | tig0020764:116095-116114 | None:intergenic | 20.0% |
| !! | ACTTCTTATTCGTAAAAATA+GGG | - | tig0020764:116237-116256 | None:intergenic | 20.0% |
| !! | TACTTCTTATTCGTAAAAAT+AGG | - | tig0020764:116238-116257 | None:intergenic | 20.0% |
| !!! | AATGTTCATATTTTAACCAA+CGG | - | tig0020764:116677-116696 | None:intergenic | 20.0% |
| !! | TTGGTTAAAATATGAACATT+GGG | + | tig0020764:116677-116696 | Msa1385640:intron | 20.0% |
| !!! | CATCTATAGTTAAATTTTGT+AGG | - | tig0020764:117201-117220 | None:intergenic | 20.0% |
| !! | CTACAAAATTTAACTATAGA+TGG | + | tig0020764:117199-117218 | Msa1385640:intron | 20.0% |
| !! | CATATTGAAAAGTTTCTAAT+AGG | - | tig0020764:117329-117348 | None:intergenic | 20.0% |
| !!! | AATTTCCGTGTATTTTTAAA+TGG | + | tig0020764:117455-117474 | Msa1385640:CDS | 20.0% |
| !!! | CTTTTTTGTAGATAAAGATA+AGG | - | tig0020764:118151-118170 | None:intergenic | 20.0% |
| !!! | TATACAGAAAATTGATAGTT+GGG | - | tig0020764:118503-118522 | None:intergenic | 20.0% |
| !! | CAAAATAATTATGCAAAAGA+TGG | - | tig0020764:118542-118561 | None:intergenic | 20.0% |
| !! | ATATATGAGGAAACAAATAA+TGG | - | tig0020764:118602-118621 | None:intergenic | 20.0% |
| !! | TTTATGAGTTATCATATATG+AGG | - | tig0020764:118615-118634 | None:intergenic | 20.0% |
| !! | TTTTCATGTGAAAAAACAGA+TGG | + | tig0020764:114982-115001 | Msa1385640:intron | 25.0% |
| !!! | CTTGTTTTATGTTTCATGTT+TGG | + | tig0020764:115221-115240 | Msa1385640:intron | 25.0% |
| ! | TGGATTGTAAAATTCATGTA+TGG | + | tig0020764:115241-115260 | Msa1385640:intron | 25.0% |
| ! | GCAATCATACAAAATTCTAT+TGG | - | tig0020764:115282-115301 | None:intergenic | 25.0% |
| ! | ACTTGTGATATTATTTGGAA+AGG | + | tig0020764:115372-115391 | Msa1385640:intron | 25.0% |
| ! | GAATTAGTTAAGAACCAATT+AGG | + | tig0020764:115501-115520 | Msa1385640:intron | 25.0% |
| ! | GGATATTCTGTTTAATTGTT+TGG | - | tig0020764:115795-115814 | None:intergenic | 25.0% |
| ! | AAATGTGTCTTACTTAGATT+GGG | + | tig0020764:115815-115834 | Msa1385640:intron | 25.0% |
| !!! | ATGTTCATATTTTAACCAAC+GGG | - | tig0020764:116676-116695 | None:intergenic | 25.0% |
| ! | GTTGGTTAAAATATGAACAT+TGG | + | tig0020764:116676-116695 | Msa1385640:intron | 25.0% |
| ! | TAATGATATTCTTTAATGGG+AGG | - | tig0020764:116967-116986 | None:intergenic | 25.0% |
| ! | CAAAATTTAACTATAGATGG+TGG | + | tig0020764:117202-117221 | Msa1385640:intron | 25.0% |
| ! | GAGAACCATTTAAAAATACA+CGG | - | tig0020764:117463-117482 | None:intergenic | 25.0% |
| !! | GAATATGTTCAGTTCATTTT+TGG | + | tig0020764:118014-118033 | Msa1385640:intron | 25.0% |
| !!! | GGATTTAGTGTGTTTTTATA+CGG | + | tig0020764:118097-118116 | Msa1385640:intron | 25.0% |
| ! | TAATCTCACAAGCATTATAA+CGG | - | tig0020764:118179-118198 | None:intergenic | 25.0% |
| ! | TGAGATTAAATGTCTTAGTT+CGG | + | tig0020764:118191-118210 | Msa1385640:intron | 25.0% |
| ! | TTATTGACCTCGATTTAAAA+CGG | + | tig0020764:118242-118261 | Msa1385640:CDS | 25.0% |
| !! | TTTAAAACGGTTGAATAAAG+TGG | + | tig0020764:118255-118274 | Msa1385640:CDS | 25.0% |
| ! | TATCACAAAAACATTCTGTA+AGG | - | tig0020764:118411-118430 | None:intergenic | 25.0% |
| !! | GTATACAGAAAATTGATAGT+TGG | - | tig0020764:118504-118523 | None:intergenic | 25.0% |
| !!! | CTTTCTAAAACATTTACTGT+TGG | + | tig0020764:118650-118669 | Msa1385640:three_prime_UTR | 25.0% |
| ACATAAGAGCAAAATTGTTG+TGG | - | tig0020764:114892-114911 | None:intergenic | 30.0% | |
| TTCACATGAAAATCTTTGTC+AGG | - | tig0020764:114974-114993 | None:intergenic | 30.0% | |
| AATATTGTTCTCTCTTACAC+TGG | + | tig0020764:115064-115083 | Msa1385640:CDS | 30.0% | |
| ! | GAAGCACTTGTGATATTATT+TGG | + | tig0020764:115367-115386 | Msa1385640:intron | 30.0% |
| TATCAATTCTGTCAGTAGTT+AGG | + | tig0020764:115479-115498 | Msa1385640:intron | 30.0% | |
| TTGAGTAACTAACTCCTAAT+TGG | - | tig0020764:115518-115537 | None:intergenic | 30.0% | |
| TTAGGAGTTAGTTACTCAAT+TGG | + | tig0020764:115519-115538 | Msa1385640:intron | 30.0% | |
| GTTAGAGATTTAGACTCAAA+GGG | - | tig0020764:115601-115620 | None:intergenic | 30.0% | |
| TGTTAGAGATTTAGACTCAA+AGG | - | tig0020764:115602-115621 | None:intergenic | 30.0% | |
| TTTCATAAGTCTCAGTTACT+GGG | - | tig0020764:115650-115669 | None:intergenic | 30.0% | |
| ! | TTTTCATAAGTCTCAGTTAC+TGG | - | tig0020764:115651-115670 | None:intergenic | 30.0% |
| CAATCTAAGTAAGACACATT+TGG | - | tig0020764:115816-115835 | None:intergenic | 30.0% | |
| CAAATGTGTCTTACTTAGAT+TGG | + | tig0020764:115814-115833 | Msa1385640:intron | 30.0% | |
| ACTTATTTCCTCTTCAGATA+AGG | + | tig0020764:115948-115967 | Msa1385640:CDS | 30.0% | |
| TTGAAAACCCATTAACCAAA+TGG | + | tig0020764:116128-116147 | Msa1385640:intron | 30.0% | |
| AAAACAGCCATTTGGTTAAT+GGG | - | tig0020764:116138-116157 | None:intergenic | 30.0% | |
| AAAAACAGCCATTTGGTTAA+TGG | - | tig0020764:116139-116158 | None:intergenic | 30.0% | |
| TGATGATAAAAACAGCCATT+TGG | - | tig0020764:116146-116165 | None:intergenic | 30.0% | |
| ! | TACTTTCTAGACTCACATTT+TGG | + | tig0020764:116317-116336 | Msa1385640:intron | 30.0% |
| !! | TGATTTTAGTCTTCTCATGT+CGG | + | tig0020764:116431-116450 | Msa1385640:CDS | 30.0% |
| TAATTCATGATTTCTGAGCA+AGG | - | tig0020764:116590-116609 | None:intergenic | 30.0% | |
| TCATACTAGGTAAATACTAC+CGG | - | tig0020764:116766-116785 | None:intergenic | 30.0% | |
| ! | TGATCAGTTTAGTTCATACT+AGG | - | tig0020764:116779-116798 | None:intergenic | 30.0% |
| TTTATCTCAACTGATAAGCT+GGG | - | tig0020764:116900-116919 | None:intergenic | 30.0% | |
| TATCAGTTGAGATAAAGGTA+TGG | + | tig0020764:116904-116923 | Msa1385640:intron | 30.0% | |
| !! | TTAGGCTACATTTTGATGAA+TGG | - | tig0020764:117066-117085 | None:intergenic | 30.0% |
| ATCAAAATGTAGCCTAAATG+CGG | + | tig0020764:117069-117088 | Msa1385640:intron | 30.0% | |
| TCAGATATGAATCTTGAAGT+AGG | - | tig0020764:117102-117121 | None:intergenic | 30.0% | |
| AGACAAATGATAAAATGCTC+AGG | - | tig0020764:117257-117276 | None:intergenic | 30.0% | |
| !! | GCTTAGTTCTAGAAAAATGA+CGG | - | tig0020764:117307-117326 | None:intergenic | 30.0% |
| ! | GGCTTTATGAATTCTTTCTT+TGG | - | tig0020764:117405-117424 | None:intergenic | 30.0% |
| AGTAGTAAAGAGATCTTTGA+TGG | - | tig0020764:117426-117445 | None:intergenic | 30.0% | |
| !! | AATACACGGAAATTGTTTTG+AGG | - | tig0020764:117449-117468 | None:intergenic | 30.0% |
| TTAAATGGTTCTCTCATACT+CGG | + | tig0020764:117470-117489 | Msa1385640:CDS | 30.0% | |
| TAAATAAGTTCTCTGTGCAT+TGG | - | tig0020764:117586-117605 | None:intergenic | 30.0% | |
| CTTGACAATATTGACATAGA+AGG | + | tig0020764:117668-117687 | Msa1385640:CDS | 30.0% | |
| !! | TGATGATATGTTTTAGACCA+AGG | + | tig0020764:117858-117877 | Msa1385640:CDS | 30.0% |
| !! | TAAGCAAGCCTTTGATTTTA+AGG | + | tig0020764:117931-117950 | Msa1385640:CDS | 30.0% |
| TCTGCTTACCTTAAAATCAA+AGG | - | tig0020764:117942-117961 | None:intergenic | 30.0% | |
| !!! | TGGTTTAAATTTTTGGTGTC+TGG | + | tig0020764:117981-118000 | Msa1385640:intron | 30.0% |
| ATGAACTGAACATATTCGTA+TGG | - | tig0020764:118011-118030 | None:intergenic | 30.0% | |
| !!! | TCAGTTCATTTTTGGTTAGT+AGG | + | tig0020764:118022-118041 | Msa1385640:intron | 30.0% |
| CCAAGTGTTAAATTGATTGA+AGG | - | tig0020764:118079-118098 | None:intergenic | 30.0% | |
| CCTTCAATCAATTTAACACT+TGG | + | tig0020764:118076-118095 | Msa1385640:intron | 30.0% | |
| !! | GTTGCTACTTGATTTGTATT+AGG | + | tig0020764:118213-118232 | Msa1385640:intron | 30.0% |
| !! | TATTCAACCGTTTTAAATCG+AGG | - | tig0020764:118252-118271 | None:intergenic | 30.0% |
| CTATCTTCTTATCTAACTTG+TGG | - | tig0020764:118288-118307 | None:intergenic | 30.0% | |
| TTACAAAGAGATGAGCAAAA+TGG | + | tig0020764:118315-118334 | Msa1385640:CDS | 30.0% | |
| AAAATGGATCATGGAAGAAA+TGG | + | tig0020764:118331-118350 | Msa1385640:CDS | 30.0% | |
| AAATGGAGATGCAAACTTAT+AGG | + | tig0020764:118348-118367 | Msa1385640:CDS | 30.0% | |
| AATGGAGATGCAAACTTATA+GGG | + | tig0020764:118349-118368 | Msa1385640:CDS | 30.0% | |
| GTGAAGCAAAATATTTATGC+AGG | - | tig0020764:118457-118476 | None:intergenic | 30.0% | |
| ! | ATGAGGAAACAAATAATGGA+AGG | - | tig0020764:118598-118617 | None:intergenic | 30.0% |
| ! | TCTAAAACATTTACTGTTGG+TGG | + | tig0020764:118653-118672 | Msa1385640:three_prime_UTR | 30.0% |
| !! | CAGGTGTTGTTTGATTAAGA+TGG | - | tig0020764:114833-114852 | None:intergenic | 35.0% |
| AAGAGCAAAATTGTTGTGGT+TGG | - | tig0020764:114888-114907 | None:intergenic | 35.0% | |
| AGAACTTACATAAGAAGGAG+AGG | - | tig0020764:115092-115111 | None:intergenic | 35.0% | |
| ATTAATTCCGTAAGCTCTTC+AGG | + | tig0020764:115437-115456 | Msa1385640:intron | 35.0% | |
| TTAATTCCGTAAGCTCTTCA+GGG | + | tig0020764:115438-115457 | Msa1385640:intron | 35.0% | |
| TCTGAAGAGGAAATAAGTTC+AGG | - | tig0020764:115946-115965 | None:intergenic | 35.0% | |
| AGCAATTTCCTTATCTGAAG+AGG | - | tig0020764:115959-115978 | None:intergenic | 35.0% | |
| TCTTCAGATAAGGAAATTGC+TGG | + | tig0020764:115958-115977 | Msa1385640:CDS | 35.0% | |
| CTTCAGATAAGGAAATTGCT+GGG | + | tig0020764:115959-115978 | Msa1385640:CDS | 35.0% | |
| ! | ACATATTTGGAACCAAGCAA+AGG | - | tig0020764:116012-116031 | None:intergenic | 35.0% |
| GTTCCAAATATGTTGATGCT+GGG | + | tig0020764:116019-116038 | Msa1385640:CDS | 35.0% | |
| TTCCAAATATGTTGATGCTG+GGG | + | tig0020764:116020-116039 | Msa1385640:CDS | 35.0% | |
| AGAACAGGAGAAGAATGAAA+CGG | - | tig0020764:116056-116075 | None:intergenic | 35.0% | |
| ! | TTGGTGATTTGTATTCCTCA+AGG | - | tig0020764:116180-116199 | None:intergenic | 35.0% |
| AGTAAAGATGTTGCATGAGT+AGG | + | tig0020764:116254-116273 | Msa1385640:intron | 35.0% | |
| !! | AGTCTAGAAAGTACCAAAAC+AGG | - | tig0020764:116310-116329 | None:intergenic | 35.0% |
| CAATGTAATTCAAGCAGTGT+AGG | - | tig0020764:116650-116669 | None:intergenic | 35.0% | |
| !!! | TTCATATTTTAACCAACGGG+AGG | - | tig0020764:116673-116692 | None:intergenic | 35.0% |
| ! | CTGACTAGTTAGTGTATGTA+TGG | - | tig0020764:116820-116839 | None:intergenic | 35.0% |
| CATACATACACTAACTAGTC+AGG | + | tig0020764:116818-116837 | Msa1385640:intron | 35.0% | |
| TAAGCTTCGTGTTTCATTTC+AGG | + | tig0020764:116858-116877 | Msa1385640:intron | 35.0% | |
| ! | TGTTTCATTTCAGGTAGTCA+AGG | + | tig0020764:116867-116886 | Msa1385640:intron | 35.0% |
| TTATCTCAACTGATAAGCTG+GGG | - | tig0020764:116899-116918 | None:intergenic | 35.0% | |
| CTTTATCTCAACTGATAAGC+TGG | - | tig0020764:116901-116920 | None:intergenic | 35.0% | |
| CAGCTTATCAGTTGAGATAA+AGG | + | tig0020764:116899-116918 | Msa1385640:CDS | 35.0% | |
| AAATCAAGCCAAAGACAAAG+AGG | - | tig0020764:117027-117046 | None:intergenic | 35.0% | |
| TATGTCTTCAGATTTCAGAG+CGG | + | tig0020764:117345-117364 | Msa1385640:intron | 35.0% | |
| ! | TGAAAGTACAGATGCATCTA+TGG | + | tig0020764:117511-117530 | Msa1385640:CDS | 35.0% |
| GGAAAGCTTGAGAATTGTAA+AGG | + | tig0020764:117799-117818 | Msa1385640:CDS | 35.0% | |
| !! | ATGTTTTAGACCAAGGAAAG+AGG | + | tig0020764:117865-117884 | Msa1385640:CDS | 35.0% |
| CTCAAGATATACAGTATCGT+AGG | - | tig0020764:117906-117925 | None:intergenic | 35.0% | |
| !! | TTTTGGTTAGTAGGTCTTGA+CGG | + | tig0020764:118031-118050 | Msa1385640:intron | 35.0% |
| !! | TTAAGATGGACTGCATGCAA+TGG | - | tig0020764:114819-114838 | None:intergenic | 40.0% |
| ! | GCTCTTATGTTTGAAACGCA+TGG | + | tig0020764:114902-114921 | Msa1385640:intron | 40.0% |
| TGAAGAAGATGCAGCTCATT+GGG | + | tig0020764:115018-115037 | Msa1385640:CDS | 40.0% | |
| CATTGGGTTTATAGAGGTGA+AGG | + | tig0020764:115034-115053 | Msa1385640:CDS | 40.0% | |
| GCAAGCACGTTAGATCTATT+TGG | + | tig0020764:115315-115334 | Msa1385640:intron | 40.0% | |
| GGTTCCAAATATGTTGATGC+TGG | + | tig0020764:116018-116037 | Msa1385640:CDS | 40.0% | |
| TACCCCAGCATCAACATATT+TGG | - | tig0020764:116025-116044 | None:intergenic | 40.0% | |
| ! | CTCAGACATTGATCTAGAAC+AGG | - | tig0020764:116071-116090 | None:intergenic | 40.0% |
| !! | GAAAGTACCAAAACAGGTAC+AGG | - | tig0020764:116304-116323 | None:intergenic | 40.0% |
| GATCATTCAATCTTCCCTCA+AGG | + | tig0020764:116453-116472 | Msa1385640:CDS | 40.0% | |
| TTCAATCTTCCCTCAAGGTA+TGG | + | tig0020764:116458-116477 | Msa1385640:intron | 40.0% | |
| GTCTCAAAACCATACCTTGA+GGG | - | tig0020764:116470-116489 | None:intergenic | 40.0% | |
| TGTCTCAAAACCATACCTTG+AGG | - | tig0020764:116471-116490 | None:intergenic | 40.0% | |
| TTCATTCTGAATGCTGTCTC+CGG | + | tig0020764:116744-116763 | Msa1385640:intron | 40.0% | |
| GTAGGAAGAAATCCGCATTT+AGG | - | tig0020764:117084-117103 | None:intergenic | 40.0% | |
| CTGAAGAAACTGCTATCAAG+AGG | + | tig0020764:117118-117137 | Msa1385640:CDS | 40.0% | |
| AAGAAACTGCTATCAAGAGG+AGG | + | tig0020764:117121-117140 | Msa1385640:CDS | 40.0% | |
| !! | CAAGCTCTGAAATTGCAACA+TGG | + | tig0020764:117165-117184 | Msa1385640:CDS | 40.0% |
| ! | TCTGAAATTGCAACATGGAG+AGG | + | tig0020764:117170-117189 | Msa1385640:CDS | 40.0% |
| ACTTGAAGATGAACTTCAGC+CGG | + | tig0020764:117541-117560 | Msa1385640:CDS | 40.0% | |
| ! | AAGGACTCCTGATTTTTGCA+CGG | - | tig0020764:117624-117643 | None:intergenic | 40.0% |
| CATTACTTCTCAACAGAGCA+TGG | + | tig0020764:117712-117731 | Msa1385640:CDS | 40.0% | |
| ! | TTTTAGACCAAGGAAAGAGG+AGG | + | tig0020764:117868-117887 | Msa1385640:CDS | 40.0% |
| TTTAGACCAAGGAAAGAGGA+GGG | + | tig0020764:117869-117888 | Msa1385640:CDS | 40.0% | |
| GAGATGAGCAAAATGGATCA+TGG | + | tig0020764:118322-118341 | Msa1385640:CDS | 40.0% | |
| AAGTCTCAGTATGCAACTTC+AGG | - | tig0020764:118376-118395 | None:intergenic | 40.0% | |
| TGGTATTCTGCATGATGCAT+TGG | + | tig0020764:118673-118692 | Msa1385640:three_prime_UTR | 40.0% | |
| TATTCTGCATGATGCATTGG+AGG | + | tig0020764:118676-118695 | Msa1385640:three_prime_UTR | 40.0% | |
| ATTCTGCATGATGCATTGGA+GGG | + | tig0020764:118677-118696 | Msa1385640:three_prime_UTR | 40.0% | |
| CAAACAACACCTGATCACAG+AGG | + | tig0020764:114840-114859 | Msa1385640:CDS | 45.0% | |
| CTGAAGAAGATGCAGCTCAT+TGG | + | tig0020764:115017-115036 | Msa1385640:CDS | 45.0% | |
| GCAGCTCATTGGGTTTATAG+AGG | + | tig0020764:115028-115047 | Msa1385640:CDS | 45.0% | |
| AAGCAACCCTGAAGAGCTTA+CGG | - | tig0020764:115447-115466 | None:intergenic | 45.0% | |
| TTACTGGGATCATCAGGAGA+GGG | - | tig0020764:115635-115654 | None:intergenic | 45.0% | |
| TCTCAGTTACTGGGATCATC+AGG | - | tig0020764:115641-115660 | None:intergenic | 45.0% | |
| TTCATGTGGAGTCAGAGCTA+TGG | - | tig0020764:115902-115921 | None:intergenic | 45.0% | |
| !! | TAGCTCTGACTCCACATGAA+CGG | + | tig0020764:115902-115921 | Msa1385640:CDS | 45.0% |
| CATGTCATGAAGCCTTTGCT+TGG | + | tig0020764:115997-116016 | Msa1385640:CDS | 45.0% | |
| ATCACTCTGTGCTTACCTTG+AGG | + | tig0020764:116162-116181 | Msa1385640:intron | 45.0% | |
| ! | TCTCTGACCTGTACCTGTTT+TGG | + | tig0020764:116294-116313 | Msa1385640:intron | 45.0% |
| !! | GACTCACATTTTGGTGACCA+AGG | + | tig0020764:116326-116345 | Msa1385640:intron | 45.0% |
| GACCAAGGAATTCCTTGAGA+CGG | + | tig0020764:116341-116360 | Msa1385640:CDS | 45.0% | |
| AACCGTCTCAAGGAATTCCT+TGG | - | tig0020764:116346-116365 | None:intergenic | 45.0% | |
| CATTCTTCTCAACCGTCTCA+AGG | - | tig0020764:116356-116375 | None:intergenic | 45.0% | |
| !! | TGGGCGAGTTGATGTTTCAA+GGG | + | tig0020764:116395-116414 | Msa1385640:CDS | 45.0% |
| TGAATTACATTGCCTCCCGT+TGG | + | tig0020764:116658-116677 | Msa1385640:intron | 45.0% | |
| AGACAAAGAGGAAGAGGGAA+GGG | - | tig0020764:117015-117034 | None:intergenic | 45.0% | |
| AAGACAAAGAGGAAGAGGGA+AGG | - | tig0020764:117016-117035 | None:intergenic | 45.0% | |
| TCCCTCTTCCTCTTTGTCTT+TGG | + | tig0020764:117016-117035 | Msa1385640:intron | 45.0% | |
| GCCAAAGACAAAGAGGAAGA+GGG | - | tig0020764:117020-117039 | None:intergenic | 45.0% | |
| AGCCAAAGACAAAGAGGAAG+AGG | - | tig0020764:117021-117040 | None:intergenic | 45.0% | |
| ATCCAGAGAACAGATCGAGT+GGG | - | tig0020764:117382-117401 | None:intergenic | 45.0% | |
| AATGGTTCTCTCATACTCGG+AGG | + | tig0020764:117473-117492 | Msa1385640:CDS | 45.0% | |
| ATGGTTCTCTCATACTCGGA+GGG | + | tig0020764:117474-117493 | Msa1385640:CDS | 45.0% | |
| CCATCATCAGCTTGAATGAC+CGG | - | tig0020764:117563-117582 | None:intergenic | 45.0% | |
| ACTGAAGCCGTGCAAAAATC+AGG | + | tig0020764:117614-117633 | Msa1385640:CDS | 45.0% | |
| AGTCCTTGATAAGCTCCTTG+AGG | + | tig0020764:117637-117656 | Msa1385640:CDS | 45.0% | |
| GAACCTCAAGGAGCTTATCA+AGG | - | tig0020764:117643-117662 | None:intergenic | 45.0% | |
| TGTCAAGCTTCTGAACCTCA+AGG | - | tig0020764:117655-117674 | None:intergenic | 45.0% | |
| CAGTGATGCAGAATGCAAAG+AGG | - | tig0020764:117777-117796 | None:intergenic | 45.0% | |
| CTCTTTGCATTCTGCATCAC+TGG | + | tig0020764:117775-117794 | Msa1385640:CDS | 45.0% | |
| TTTGCATTCTGCATCACTGG+AGG | + | tig0020764:117778-117797 | Msa1385640:CDS | 45.0% | |
| ! | CTTTTGCAGTTGCTGCTATC+AGG | - | tig0020764:117829-117848 | None:intergenic | 45.0% |
| CGTTGTGTTCCTCTGTGATC+AGG | - | tig0020764:114852-114871 | None:intergenic | 50.0% | |
| TCACAGAGGAACACAACGCA+AGG | + | tig0020764:114854-114873 | Msa1385640:CDS | 50.0% | |
| GTTACTGGGATCATCAGGAG+AGG | - | tig0020764:115636-115655 | None:intergenic | 50.0% | |
| CATTCGCAAGTCTCCAAGGA+AGG | + | tig0020764:115849-115868 | Msa1385640:CDS | 50.0% | |
| !! | TGCAACGCTGATTCCTTCCT+TGG | - | tig0020764:115865-115884 | None:intergenic | 50.0% |
| AGGAAGGAATCAGCGTTGCA+AGG | + | tig0020764:115865-115884 | Msa1385640:CDS | 50.0% | |
| AATCAGCGTTGCAAGGAGTG+AGG | + | tig0020764:115872-115891 | Msa1385640:CDS | 50.0% | |
| TTCCAGATGAGCCGTTCATG+TGG | - | tig0020764:115916-115935 | None:intergenic | 50.0% | |
| TTACTAGTCAACGCCCTGCT+GGG | + | tig0020764:116376-116395 | Msa1385640:CDS | 50.0% | |
| AAACATCAACTCGCCCAGCA+GGG | - | tig0020764:116392-116411 | None:intergenic | 50.0% | |
| !! | CTGGGCGAGTTGATGTTTCA+AGG | + | tig0020764:116394-116413 | Msa1385640:CDS | 50.0% |
| AACCCACTCGATCTGTTCTC+TGG | + | tig0020764:117377-117396 | Msa1385640:CDS | 50.0% | |
| GATCCAGAGAACAGATCGAG+TGG | - | tig0020764:117383-117402 | None:intergenic | 50.0% | |
| CCGGTCATTCAAGCTGATGA+TGG | + | tig0020764:117560-117579 | Msa1385640:CDS | 50.0% | |
| GAGCATGGCGCGTAAAGAAT+TGG | + | tig0020764:117727-117746 | Msa1385640:CDS | 50.0% | |
| CTACCCTCCTCACATGCTAT+TGG | + | tig0020764:118476-118495 | Msa1385640:three_prime_UTR | 50.0% | |
| GGACCAATAGCATGTGAGGA+GGG | - | tig0020764:118482-118501 | None:intergenic | 50.0% | |
| GTTGGGACCAATAGCATGTG+AGG | - | tig0020764:118486-118505 | None:intergenic | 50.0% | |
| TGGGATCATCAGGAGAGGGA+AGG | - | tig0020764:115631-115650 | None:intergenic | 55.0% | |
| TGCGCATTCGCAAGTCTCCA+AGG | + | tig0020764:115845-115864 | Msa1385640:CDS | 55.0% | |
| CTCCACATGAACGGCTCATC+TGG | + | tig0020764:115911-115930 | Msa1385640:CDS | 55.0% | |
| GTTACTAGTCAACGCCCTGC+TGG | + | tig0020764:116375-116394 | Msa1385640:CDS | 55.0% | |
| GAAACATCAACTCGCCCAGC+AGG | - | tig0020764:116393-116412 | None:intergenic | 55.0% | |
| TCTCTCATACTCGGAGGGCT+TGG | + | tig0020764:117479-117498 | Msa1385640:CDS | 55.0% | |
| CCAGAACCCTCCTCTTTCCT+TGG | - | tig0020764:117878-117897 | None:intergenic | 55.0% | |
| CCAAGGAAAGAGGAGGGTTC+TGG | + | tig0020764:117875-117894 | Msa1385640:CDS | 55.0% | |
| GGGACCAATAGCATGTGAGG+AGG | - | tig0020764:118483-118502 | None:intergenic | 55.0% | |
| CTGCATGATGCATTGGAGGG+TGG | + | tig0020764:118680-118699 | Msa1385640:three_prime_UTR | 55.0% | |
| CTCATACTCGGAGGGCTTGG+AGG | + | tig0020764:117482-117501 | Msa1385640:CDS | 60.0% | |
| ATACTCGGAGGGCTTGGAGG+TGG | + | tig0020764:117485-117504 | Msa1385640:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0020764 | gene | 114771 | 118716 | 114771 | ID=Msa1385640;Name=Msa1385640 |
| tig0020764 | mRNA | 114771 | 118716 | 114771 | ID=Msa1385640-mRNA-1;Parent=Msa1385640;Name=Msa1385640-mRNA-1;_AED=0.07;_eAED=0.07;_QI=12|1|1|1|1|1|8|347|478 |
| tig0020764 | exon | 114771 | 114875 | 114771 | ID=Msa1385640-mRNA-1:exon:9659;Parent=Msa1385640-mRNA-1 |
| tig0020764 | exon | 115001 | 115102 | 115001 | ID=Msa1385640-mRNA-1:exon:9660;Parent=Msa1385640-mRNA-1 |
| tig0020764 | exon | 115832 | 116041 | 115832 | ID=Msa1385640-mRNA-1:exon:9661;Parent=Msa1385640-mRNA-1 |
| tig0020764 | exon | 116327 | 116474 | 116327 | ID=Msa1385640-mRNA-1:exon:9662;Parent=Msa1385640-mRNA-1 |
| tig0020764 | exon | 116880 | 116920 | 116880 | ID=Msa1385640-mRNA-1:exon:9663;Parent=Msa1385640-mRNA-1 |
| tig0020764 | exon | 117081 | 117191 | 117081 | ID=Msa1385640-mRNA-1:exon:9664;Parent=Msa1385640-mRNA-1 |
| tig0020764 | exon | 117356 | 117952 | 117356 | ID=Msa1385640-mRNA-1:exon:9665;Parent=Msa1385640-mRNA-1 |
| tig0020764 | exon | 118235 | 118716 | 118235 | ID=Msa1385640-mRNA-1:exon:9666;Parent=Msa1385640-mRNA-1 |
| tig0020764 | five_prime_UTR | 114771 | 114782 | 114771 | ID=Msa1385640-mRNA-1:five_prime_utr;Parent=Msa1385640-mRNA-1 |
| tig0020764 | CDS | 114783 | 114875 | 114783 | ID=Msa1385640-mRNA-1:cds;Parent=Msa1385640-mRNA-1 |
| tig0020764 | CDS | 115001 | 115102 | 115001 | ID=Msa1385640-mRNA-1:cds;Parent=Msa1385640-mRNA-1 |
| tig0020764 | CDS | 115832 | 116041 | 115832 | ID=Msa1385640-mRNA-1:cds;Parent=Msa1385640-mRNA-1 |
| tig0020764 | CDS | 116327 | 116474 | 116327 | ID=Msa1385640-mRNA-1:cds;Parent=Msa1385640-mRNA-1 |
| tig0020764 | CDS | 116880 | 116920 | 116880 | ID=Msa1385640-mRNA-1:cds;Parent=Msa1385640-mRNA-1 |
| tig0020764 | CDS | 117081 | 117191 | 117081 | ID=Msa1385640-mRNA-1:cds;Parent=Msa1385640-mRNA-1 |
| tig0020764 | CDS | 117356 | 117952 | 117356 | ID=Msa1385640-mRNA-1:cds;Parent=Msa1385640-mRNA-1 |
| tig0020764 | CDS | 118235 | 118369 | 118235 | ID=Msa1385640-mRNA-1:cds;Parent=Msa1385640-mRNA-1 |
| tig0020764 | three_prime_UTR | 118370 | 118716 | 118370 | ID=Msa1385640-mRNA-1:three_prime_utr;Parent=Msa1385640-mRNA-1 |
| Gene Sequence |
| Protein sequence |
