AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1228660

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1228660 MtrunA17_Chr8g0335411 95.979 373 15 0 1 373 1 373 0.0 720
Msa1228660 MtrunA17_Chr7g0247991 85.791 373 53 0 1 373 1 373 0.0 641
Msa1228660 MtrunA17_Chr7g0236011 79.088 373 78 0 1 373 1 373 0.0 606
Msa1228660 MtrunA17_Chr7g0235951 74.799 373 94 0 1 373 1 373 0.0 598
Msa1228660 MtrunA17_Chr4g0066991 79.088 373 58 1 1 373 1 353 0.0 590
Msa1228660 MtrunA17_Chr8g0364471 63.271 373 137 0 1 373 1 373 0.0 510
Msa1228660 MtrunA17_Chr1g0187821 63.836 365 125 3 13 373 9 370 1.70e-177 498
Msa1228660 MtrunA17_Chr1g0187831 62.772 368 129 3 11 372 8 373 8.37e-176 494
Msa1228660 MtrunA17_Chr1g0187811 61.995 371 131 3 12 373 124 493 4.29e-170 483
Msa1228660 MtrunA17_Chr2g0311701 60.278 360 139 3 17 373 17 375 4.09e-165 467
Msa1228660 MtrunA17_Chr4g0055591 61.064 357 131 4 19 373 11 361 1.46e-161 457
Msa1228660 MtrunA17_Chr2g0311681 59.722 360 141 3 17 373 11 369 1.19e-160 455
Msa1228660 MtrunA17_Chr2g0311711 60.167 359 138 3 17 373 15 370 4.15e-160 453
Msa1228660 MtrunA17_Chr2g0311691 59.167 360 143 3 17 373 11 369 4.51e-158 448
Msa1228660 MtrunA17_Chr8g0336761 54.717 371 155 5 6 373 4 364 6.28e-148 422
Msa1228660 MtrunA17_Chr8g0348081 54.366 355 152 4 22 373 17 364 1.76e-146 419
Msa1228660 MtrunA17_Chr8g0336851 52.329 365 167 4 11 373 5 364 1.11e-145 417
Msa1228660 MtrunA17_Chr8g0336751 54.813 374 165 2 1 373 27 397 6.32e-145 416
Msa1228660 MtrunA17_Chr8g0354261 50.798 376 180 3 1 373 1 374 1.94e-144 414
Msa1228660 MtrunA17_Chr2g0311741 58.133 332 131 3 44 373 2 327 2.47e-144 412
Msa1228660 MtrunA17_Chr8g0354241 50.000 376 183 3 1 373 1 374 1.83e-143 412
Msa1228660 MtrunA17_Chr8g0336861 53.782 357 153 6 22 373 17 366 2.74e-143 410
Msa1228660 MtrunA17_Chr8g0336631 52.815 373 162 6 5 373 3 365 7.47e-142 407
Msa1228660 MtrunA17_Chr2g0311761 53.908 371 164 4 6 373 6 372 3.56e-141 405
Msa1228660 MtrunA17_Chr8g0336781 53.107 354 159 4 22 373 52 400 8.55e-140 403
Msa1228660 MtrunA17_Chr2g0311921 53.482 359 160 4 18 373 4 358 1.00e-139 401
Msa1228660 MtrunA17_Chr2g0311831 54.469 358 157 3 18 373 18 371 5.44e-138 397
Msa1228660 MtrunA17_Chr4g0011311 62.500 288 108 0 1 288 1 288 4.47e-135 388
Msa1228660 MtrunA17_Chr1g0167951 51.524 361 168 4 13 373 2 355 2.50e-132 382
Msa1228660 MtrunA17_Chr4g0066121 52.033 369 164 7 11 373 5 366 4.42e-132 382
Msa1228660 MtrunA17_Chr1g0167911 50.423 355 172 2 18 372 5 355 2.44e-130 377
Msa1228660 MtrunA17_Chr7g0235981 53.073 358 136 3 16 373 2 327 9.38e-130 375
Msa1228660 MtrunA17_Chr2g0311861 51.093 366 152 5 10 373 7 347 1.25e-129 375
Msa1228660 MtrunA17_Chr8g0362741 61.806 288 95 2 1 288 1 273 5.06e-125 361
Msa1228660 MtrunA17_Chr1g0167961 49.716 352 172 3 18 368 20 367 4.59e-124 362
Msa1228660 MtrunA17_Chr6g0472861 48.525 373 173 6 13 373 8 373 1.15e-123 361
Msa1228660 MtrunA17_Chr7g0225881 46.866 367 185 4 13 373 8 370 2.48e-120 352
Msa1228660 MtrunA17_Chr1g0184241 47.486 358 179 3 17 373 18 367 2.94e-116 342
Msa1228660 MtrunA17_Chr1g0167931 45.014 351 151 2 18 368 5 313 1.69e-108 320
Msa1228660 MtrunA17_Chr7g0266651 44.044 361 196 4 15 373 6 362 1.02e-100 302
Msa1228660 MtrunA17_Chr1g0161081 41.926 353 194 5 17 366 21 365 7.00e-89 272
Msa1228660 MtrunA17_Chr1g0161041 42.340 359 196 5 17 372 44 394 1.85e-87 269
Msa1228660 MtrunA17_Chr1g0161111 40.548 365 204 6 6 365 67 423 1.32e-84 263
Msa1228660 MtrunA17_Chr7g0235991 64.815 162 57 0 47 208 1 162 3.48e-78 238
Msa1228660 MtrunA17_Chr8g0336831 48.684 228 113 3 22 247 17 242 4.26e-78 241
Msa1228660 MtrunA17_Chr8g0364161 58.427 178 74 0 1 178 1 178 1.72e-73 226
Msa1228660 MtrunA17_Chr8g0336871 59.322 177 63 2 192 368 2 169 2.75e-71 220
Msa1228660 MtrunA17_Chr8g0336801 61.783 157 57 1 217 373 3 156 4.13e-68 211
Msa1228660 MtrunA17_Chr5g0412651 34.286 315 194 5 66 373 37 345 1.26e-56 188
Msa1228660 MtrunA17_Chr6g0455481 38.585 311 167 10 60 361 35 330 9.55e-56 186
Msa1228660 MtrunA17_Chr7g0265221 33.973 365 209 10 32 373 25 380 5.32e-55 185
Msa1228660 MtrunA17_Chr5g0412681 33.993 303 179 5 66 361 32 320 4.13e-54 181
Msa1228660 MtrunA17_Chr3g0128001 33.013 312 192 6 66 372 37 336 9.53e-53 178
Msa1228660 MtrunA17_Chr8g0345831 32.907 313 195 4 66 373 41 343 1.80e-52 177
Msa1228660 MtrunA17_Chr1g0179801 32.682 358 215 8 32 373 26 373 2.62e-52 178
Msa1228660 MtrunA17_Chr3g0126741 32.733 333 200 10 33 354 23 342 4.04e-52 177
Msa1228660 MtrunA17_Chr5g0437181 34.091 352 214 9 31 372 12 355 8.44e-52 176
Msa1228660 MtrunA17_Chr5g0412671 33.016 315 198 4 66 373 37 345 1.17e-51 175
Msa1228660 MtrunA17_Chr1g0184111 31.476 359 216 7 23 372 1 338 2.85e-51 174
Msa1228660 MtrunA17_Chr1g0184121 33.333 345 200 7 23 358 1 324 3.92e-51 174
Msa1228660 MtrunA17_Chr7g0220011 34.906 318 162 11 63 361 35 326 4.48e-51 173
Msa1228660 MtrunA17_Chr7g0242551 30.748 361 229 8 23 369 5 358 6.03e-51 174
Msa1228660 MtrunA17_Chr1g0184161 34.505 313 188 6 66 372 37 338 7.58e-51 173
Msa1228660 MtrunA17_Chr8g0336791 44.693 179 95 3 22 198 17 193 7.68e-51 168
Msa1228660 MtrunA17_Chr3g0109041 31.006 358 219 12 31 373 8 352 1.29e-50 173
Msa1228660 MtrunA17_Chr4g0006371 30.959 365 216 11 31 369 12 366 1.53e-50 173
Msa1228660 MtrunA17_Chr8g0364171 66.364 110 37 0 179 288 17 126 4.69e-49 162
Msa1228660 MtrunA17_Chr8g0375571 30.086 349 229 8 32 373 10 350 7.02e-49 168
Msa1228660 MtrunA17_Chr1g0184101 33.438 317 188 6 66 373 37 339 1.13e-48 167
Msa1228660 MtrunA17_Chr2g0314391 30.460 348 227 8 32 373 35 373 1.80e-48 168
Msa1228660 MtrunA17_Chr7g0265351 32.812 320 191 6 62 373 34 337 7.99e-48 165
Msa1228660 MtrunA17_Chr5g0426891 31.805 349 222 9 32 373 3 342 1.27e-47 164
Msa1228660 MtrunA17_Chr2g0314401 30.286 350 225 11 32 373 16 354 5.27e-47 163
Msa1228660 MtrunA17_Chr4g0050031 32.372 312 199 7 67 373 62 366 1.38e-46 162
Msa1228660 MtrunA17_Chr3g0113641 32.000 325 202 9 58 372 41 356 2.53e-46 162
Msa1228660 MtrunA17_Chr7g0220001 32.353 306 180 8 66 361 40 328 2.62e-46 161
Msa1228660 MtrunA17_Chr2g0314381 29.595 321 211 7 59 373 69 380 4.50e-46 162
Msa1228660 MtrunA17_Chr1g0162351 32.229 332 185 8 49 355 57 373 5.59e-46 162
Msa1228660 MtrunA17_Chr1g0184151 32.119 302 182 7 66 358 37 324 5.86e-46 160
Msa1228660 MtrunA17_Chr8g0375601 27.714 350 236 8 33 373 11 352 5.93e-46 161
Msa1228660 MtrunA17_Chr5g0423221 28.205 351 230 8 32 373 36 373 8.47e-46 161
Msa1228660 MtrunA17_Chr5g0423191 30.514 331 196 9 58 373 37 348 1.36e-45 159
Msa1228660 MtrunA17_Chr5g0421041 27.809 356 222 8 32 373 12 346 1.95e-45 159
Msa1228660 MtrunA17_Chr5g0421101 30.460 348 217 11 32 369 12 344 2.04e-45 159
Msa1228660 MtrunA17_Chr3g0121141 34.884 301 172 13 66 359 3 286 3.02e-45 157
Msa1228660 MtrunA17_Chr1g0162321 32.229 332 185 8 49 355 57 373 3.71e-45 159
Msa1228660 MtrunA17_Chr8g0375701 31.503 346 200 13 44 373 31 355 4.14e-45 158
Msa1228660 MtrunA17_Chr1g0162361 32.602 319 180 9 67 365 27 330 4.68e-45 158
Msa1228660 MtrunA17_Chr4g0045441 30.994 342 191 8 49 367 14 333 6.58e-45 158
Msa1228660 MtrunA17_Chr5g0439011 33.441 311 182 12 65 365 3 298 8.04e-45 157
Msa1228660 MtrunA17_Chr5g0421091 30.946 349 221 8 33 373 11 347 9.06e-45 157
Msa1228660 MtrunA17_Chr2g0311631 30.053 376 226 12 8 368 3 356 3.72e-44 156
Msa1228660 MtrunA17_Chr2g0289341 32.143 308 186 12 66 365 3 295 3.97e-44 155
Msa1228660 MtrunA17_Chr4g0045431 32.749 342 190 12 49 366 14 339 5.36e-44 155
Msa1228660 MtrunA17_Chr3g0093741 31.792 346 216 9 32 369 17 350 6.72e-44 155
Msa1228660 MtrunA17_Chr3g0093761 32.081 346 214 9 32 369 17 349 9.00e-44 155
Msa1228660 MtrunA17_Chr5g0420941 28.736 348 231 7 32 373 10 346 1.56e-43 154
Msa1228660 MtrunA17_Chr8g0375671 27.507 349 236 8 33 373 18 357 2.63e-43 154
Msa1228660 MtrunA17_Chr4g0045411 30.645 310 180 9 66 353 29 325 6.02e-43 152
Msa1228660 MtrunA17_Chr1g0168001 42.604 169 90 3 18 180 5 172 6.17e-43 147
Msa1228660 MtrunA17_Chr4g0045451 31.928 332 186 10 49 356 14 329 6.83e-43 152
Msa1228660 MtrunA17_Chr5g0423251 28.291 357 221 9 32 373 12 348 7.46e-43 152
Msa1228660 MtrunA17_Chr3g0102041 33.840 263 163 7 61 315 33 292 9.10e-43 152
Msa1228660 MtrunA17_Chr7g0239111 29.299 314 203 8 67 373 55 356 2.26e-42 151
Msa1228660 MtrunA17_Chr2g0296371 29.846 325 192 10 67 373 50 356 3.50e-42 151
Msa1228660 MtrunA17_Chr7g0239101 29.345 351 224 11 33 373 20 356 3.95e-42 150
Msa1228660 MtrunA17_Chr3g0093751 30.725 345 221 7 32 369 17 350 6.29e-42 150
Msa1228660 MtrunA17_Chr8g0371931 33.333 258 159 6 67 315 39 292 1.24e-41 149
Msa1228660 MtrunA17_Chr8g0365241 27.171 357 226 7 32 373 22 359 4.05e-41 148
Msa1228660 MtrunA17_Chr4g0045471 31.627 332 184 11 57 356 10 330 1.03e-40 147
Msa1228660 MtrunA17_Chr5g0420901 28.161 348 233 7 32 373 11 347 1.04e-40 147
Msa1228660 MtrunA17_Chr5g0423201 28.080 349 233 7 32 373 12 349 1.29e-40 146
Msa1228660 MtrunA17_Chr1g0167921 48.951 143 63 3 162 294 27 169 1.41e-40 141
Msa1228660 MtrunA17_Chr5g0420951 28.080 349 234 9 32 373 17 355 2.18e-40 146
Msa1228660 MtrunA17_Chr2g0311751 48.201 139 70 1 44 180 2 140 2.33e-40 140
Msa1228660 MtrunA17_Chr7g0250511 29.971 347 224 7 35 373 16 351 3.26e-40 145
Msa1228660 MtrunA17_Chr1g0162191 28.743 334 220 9 41 366 20 343 3.83e-40 145
Msa1228660 MtrunA17_Chr5g0421011 26.479 355 230 6 32 373 12 348 5.38e-40 145
Msa1228660 MtrunA17_Chr5g0405411 32.270 282 178 6 67 339 39 316 6.11e-40 145
Msa1228660 MtrunA17_Chr3g0125201 30.968 310 182 12 65 360 1 292 7.75e-40 143
Msa1228660 MtrunA17_Chr8g0375681 31.071 280 177 9 101 373 15 285 5.71e-39 140
Msa1228660 MtrunA17_Chr2g0319491 28.205 312 192 5 51 353 17 305 6.37e-39 141
Msa1228660 MtrunA17_Chr2g0332191 31.790 324 181 13 67 371 52 354 6.63e-39 142
Msa1228660 MtrunA17_Chr5g0420981 28.125 352 230 11 32 373 17 355 6.94e-39 142
Msa1228660 MtrunA17_Chr7g0239821 29.781 319 197 12 66 373 63 365 1.07e-38 142
Msa1228660 MtrunA17_Chr8g0370711 30.625 320 204 9 61 373 46 354 2.19e-38 140
Msa1228660 MtrunA17_Chr5g0423211 27.143 350 236 6 32 373 12 350 4.44e-38 140
Msa1228660 MtrunA17_Chr8g0371921 32.685 257 162 6 67 315 39 292 4.95e-38 140
Msa1228660 MtrunA17_Chr8g0370721 30.094 319 207 9 61 373 46 354 5.18e-38 139
Msa1228660 MtrunA17_Chr6g0474391 29.179 329 202 9 61 371 58 373 5.44e-38 140
Msa1228660 MtrunA17_Chr5g0398291 29.499 339 218 9 33 356 8 340 1.14e-37 139
Msa1228660 MtrunA17_Chr7g0239121 29.904 311 192 11 67 366 51 346 1.58e-37 138
Msa1228660 MtrunA17_Chr3g0145171 27.864 323 209 8 61 373 46 354 2.77e-37 137
Msa1228660 MtrunA17_Chr5g0420721 31.330 233 144 3 142 373 33 250 1.11e-36 134
Msa1228660 MtrunA17_Chr4g0064781 30.132 302 192 8 67 361 50 339 1.74e-36 135
Msa1228660 MtrunA17_Chr1g0204181 30.421 309 180 8 61 349 53 346 2.16e-36 135
Msa1228660 MtrunA17_Chr3g0126761 40.223 179 98 4 178 354 42 213 3.36e-36 131
Msa1228660 MtrunA17_Chr5g0424211 31.056 322 189 11 38 343 12 316 2.46e-35 132
Msa1228660 MtrunA17_Chr5g0424201 29.969 327 206 10 38 354 14 327 2.59e-35 132
Msa1228660 MtrunA17_Chr3g0087031 27.353 340 228 9 32 363 23 351 3.57e-35 132
Msa1228660 MtrunA17_Chr7g0232161 30.216 278 178 8 32 300 24 294 8.85e-35 130
Msa1228660 MtrunA17_Chr8g0351101 29.642 307 188 6 64 354 51 345 9.83e-35 131
Msa1228660 MtrunA17_Chr6g0488511 30.303 264 160 9 65 316 1 252 2.19e-34 129
Msa1228660 MtrunA17_Chr7g0239091 26.861 309 207 6 67 373 160 451 6.07e-34 130
Msa1228660 MtrunA17_Chr1g0191201 29.874 318 183 12 59 354 46 345 1.29e-33 128
Msa1228660 MtrunA17_Chr3g0130391 30.225 311 183 9 58 349 58 353 2.51e-31 122
Msa1228660 MtrunA17_Chr4g0045461 30.351 313 185 8 67 356 26 328 3.55e-31 121
Msa1228660 MtrunA17_Chr3g0125421 28.955 335 196 11 42 354 14 328 3.10e-30 119
Msa1228660 MtrunA17_Chr8g0384461 27.928 333 201 9 42 354 24 337 3.96e-30 118
Msa1228660 MtrunA17_Chr3g0114861 29.607 331 208 7 33 353 6 321 4.15e-30 117
Msa1228660 MtrunA17_Chr5g0407731 29.730 296 180 11 67 355 33 307 5.39e-30 117
Msa1228660 MtrunA17_Chr3g0092531 32.231 242 140 6 85 315 26 254 2.04e-29 115
Msa1228660 MtrunA17_Chr1g0148771 28.875 329 178 11 61 368 57 350 2.18e-29 116
Msa1228660 MtrunA17_Chr5g0407781 27.653 311 205 9 66 373 4 297 2.67e-29 115
Msa1228660 MtrunA17_Chr1g0170631 33.333 201 120 8 178 373 1 192 9.52e-29 110
Msa1228660 MtrunA17_Chr7g0239071 26.370 292 179 9 99 373 29 301 3.54e-28 112
Msa1228660 MtrunA17_Chr3g0114871 30.112 269 168 8 44 303 18 275 9.59e-28 110
Msa1228660 MtrunA17_Chr4g0075471 41.727 139 70 6 228 363 32 162 2.25e-27 105
Msa1228660 MtrunA17_Chr3g0105281 28.378 296 166 9 58 332 25 295 4.79e-27 109
Msa1228660 MtrunA17_Chr2g0285931 26.852 324 199 10 67 372 28 331 6.32e-27 109
Msa1228660 MtrunA17_Chr5g0394071 35.465 172 99 1 182 353 4 163 6.96e-27 105
Msa1228660 MtrunA17_Chr8g0384481 28.963 328 193 11 65 371 57 365 7.75e-27 109
Msa1228660 MtrunA17_Chr3g0145181 26.667 300 205 7 61 353 43 334 1.18e-26 108
Msa1228660 MtrunA17_Chr4g0068891 28.349 321 194 11 67 372 20 319 1.21e-26 108
Msa1228660 MtrunA17_Chr2g0314371 28.475 295 167 8 59 326 44 321 2.06e-26 107
Msa1228660 MtrunA17_Chr5g0420881 34.228 149 91 3 226 373 2 144 4.84e-26 102
Msa1228660 MtrunA17_Chr2g0313111 28.526 312 184 12 66 362 27 314 5.67e-26 106
Msa1228660 MtrunA17_Chr3g0145201 26.421 299 205 7 62 353 679 969 5.50e-25 107
Msa1228660 MtrunA17_Chr8g0336841 52.326 86 38 1 288 373 9 91 2.96e-24 95.5
Msa1228660 MtrunA17_Chr1g0194321 28.024 339 190 14 65 373 18 332 4.03e-24 101
Msa1228660 MtrunA17_Chr8g0358941 28.364 275 151 11 67 315 27 281 8.42e-24 100
Msa1228660 MtrunA17_Chr7g0252371 70.238 84 24 1 183 265 1 84 1.00e-23 94.7
Msa1228660 MtrunA17_Chr1g0161101 39.766 171 86 5 165 333 346 501 1.26e-23 102
Msa1228660 MtrunA17_Chr4g0037611 35.366 164 97 2 200 354 11 174 2.06e-23 95.9
Msa1228660 MtrunA17_Chr8g0348951 27.036 307 189 10 66 354 4 293 4.95e-23 98.2
Msa1228660 MtrunA17_Chr1g0158011 27.473 273 181 8 106 373 1 261 5.56e-23 97.1
Msa1228660 MtrunA17_Chr7g0233661 34.228 149 86 1 205 353 1 137 9.17e-23 93.6
Msa1228660 MtrunA17_Chr7g0247741 29.085 306 192 10 59 354 3 293 9.64e-23 97.4
Msa1228660 MtrunA17_Chr1g0158021 28.444 225 146 7 63 280 45 261 4.19e-22 94.4
Msa1228660 MtrunA17_Chr4g0064771 33.333 183 112 5 185 365 31 205 1.41e-21 91.7
Msa1228660 MtrunA17_Chr3g0092581 37.795 127 77 2 190 315 1 126 2.83e-21 90.1
Msa1228660 MtrunA17_Chr6g0486831 25.970 335 202 11 57 358 4 325 1.15e-20 92.0
Msa1228660 MtrunA17_Chr4g0052251 24.920 313 199 10 67 362 29 322 9.01e-19 86.3
Msa1228660 MtrunA17_Chr2g0311611 48.571 70 29 1 226 288 2 71 1.50e-18 79.3
Msa1228660 MtrunA17_Chr8g0389941 24.845 322 196 11 69 360 33 338 1.66e-18 85.9
Msa1228660 MtrunA17_Chr4g0055911 26.198 313 199 10 60 354 2 300 2.02e-18 85.1
Msa1228660 MtrunA17_Chr7g0219991 37.963 108 63 3 181 286 249 354 2.57e-18 85.1
Msa1228660 MtrunA17_Chr2g0311821 47.368 95 44 2 71 163 11 101 3.24e-18 80.1
Msa1228660 MtrunA17_Chr2g0319521 34.862 109 71 0 180 288 16 124 1.81e-17 78.6
Msa1228660 MtrunA17_Chr4g0053251 26.736 288 169 12 66 321 7 284 3.82e-17 81.6
Msa1228660 MtrunA17_Chr2g0293931 34.722 144 82 6 183 315 10 152 3.44e-16 76.6
Msa1228660 MtrunA17_Chr4g0055871 23.397 312 204 11 60 354 2 295 2.09e-15 76.3
Msa1228660 MtrunA17_Chr4g0004071 23.410 346 195 13 60 371 2 311 2.87e-14 72.8
Msa1228660 MtrunA17_Chr1g0158031 31.073 177 110 6 201 373 12 180 3.69e-13 67.4
Msa1228660 MtrunA17_Chr8g0375581 33.696 92 48 3 201 285 1 86 3.94e-13 64.7
Msa1228660 MtrunA17_Chr5g0407591 36.047 86 49 2 268 353 7 86 5.64e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1228660 AT5G59540.1 52.861 367 165 5 12 373 3 366 1.22e-138 399
Msa1228660 AT1G06620.1 51.944 360 169 2 15 373 9 365 9.88e-137 394
Msa1228660 AT1G06650.2 51.374 364 166 5 17 373 10 369 4.61e-133 385
Msa1228660 AT2G30840.1 52.198 364 165 5 15 373 3 362 1.09e-130 379
Msa1228660 AT2G30830.1 51.811 359 166 5 17 373 5 358 9.62e-130 376
Msa1228660 AT5G59530.1 48.889 360 178 4 17 373 8 364 5.48e-129 375
Msa1228660 AT1G06640.1 49.863 365 172 5 16 373 9 369 3.07e-126 368
Msa1228660 AT5G43450.1 50.696 359 169 3 18 373 9 362 1.26e-125 366
Msa1228660 AT2G30840.3 51.099 364 163 6 15 373 3 356 8.60e-125 363
Msa1228660 AT1G06645.1 49.046 367 169 6 16 373 22 379 1.32e-123 362
Msa1228660 AT5G43440.1 48.889 360 175 5 19 373 10 365 2.83e-123 360
Msa1228660 AT2G25450.1 48.324 358 181 3 17 373 5 359 1.54e-122 358
Msa1228660 AT1G03410.2 49.288 351 170 4 18 363 5 352 2.14e-122 358
Msa1228660 AT1G04350.1 47.922 361 178 5 17 373 6 360 4.74e-122 357
Msa1228660 AT1G03410.1 49.288 351 170 4 18 363 42 389 5.50e-122 358
Msa1228660 AT1G04380.1 49.839 311 150 2 63 373 41 345 6.30e-117 343
Msa1228660 AT1G03400.1 47.429 350 170 4 18 364 5 343 7.21e-115 338
Msa1228660 AT3G61400.1 45.135 370 191 6 9 369 1 367 1.50e-114 338
Msa1228660 AT1G03400.2 43.915 378 170 5 18 364 5 371 5.44e-108 322
Msa1228660 AT1G06620.2 51.460 274 132 1 15 287 9 282 2.13e-104 309
Msa1228660 AT5G59540.2 50.000 282 136 4 12 288 3 284 3.09e-101 301
Msa1228660 AT1G06650.1 50.719 278 130 3 17 288 10 286 1.79e-100 300
Msa1228660 AT2G30840.2 51.264 277 131 2 15 287 3 279 1.61e-99 297
Msa1228660 AT5G43450.2 48.929 280 138 2 18 294 9 286 3.83e-96 288
Msa1228660 AT1G06640.2 47.552 286 143 3 16 295 9 293 4.67e-95 286
Msa1228660 AT1G06640.3 48.387 279 137 3 16 288 9 286 3.63e-94 283
Msa1228660 AT5G43440.2 47.445 274 138 4 19 287 10 282 6.91e-93 280
Msa1228660 AT3G61400.2 44.444 288 152 4 9 288 1 288 2.24e-88 268
Msa1228660 AT1G04380.2 47.788 226 115 1 63 288 41 263 5.67e-82 251
Msa1228660 AT4G10500.1 36.013 311 187 6 66 372 43 345 2.54e-60 198
Msa1228660 AT4G10490.1 33.974 312 193 5 66 372 41 344 7.78e-59 194
Msa1228660 AT5G24530.1 34.030 335 198 6 41 371 23 338 1.17e-58 194
Msa1228660 AT3G13610.1 33.618 351 209 10 32 373 26 361 1.32e-55 186
Msa1228660 AT1G55290.1 32.951 349 207 8 32 369 25 357 6.76e-55 184
Msa1228660 AT5G05600.1 32.378 349 218 8 31 369 25 365 7.25e-52 177
Msa1228660 AT3G12900.1 32.164 342 218 7 32 369 21 352 2.54e-51 175
Msa1228660 AT2G38240.1 30.312 353 225 8 31 373 10 351 1.24e-50 173
Msa1228660 AT2G36690.2 32.958 355 214 8 32 373 20 363 4.73e-49 169
Msa1228660 AT2G36690.1 32.958 355 214 8 32 373 20 363 4.73e-49 169
Msa1228660 AT3G11180.1 31.250 352 218 9 31 369 54 394 8.51e-47 164
Msa1228660 AT4G16330.2 32.177 317 180 12 66 369 66 360 2.08e-45 160
Msa1228660 AT3G11180.2 30.508 354 222 9 31 371 54 396 2.39e-45 160
Msa1228660 AT1G78550.1 29.412 323 207 9 61 373 45 356 8.83e-44 155
Msa1228660 AT1G17020.1 29.377 337 221 9 45 373 31 358 1.06e-43 155
Msa1228660 AT4G25310.1 30.861 337 214 10 44 373 29 353 2.43e-43 154
Msa1228660 AT1G62380.1 34.483 261 157 8 62 316 2 254 8.17e-43 152
Msa1228660 AT2G44800.1 30.612 343 222 9 19 354 2 335 2.17e-42 152
Msa1228660 AT1G77330.1 33.712 264 153 8 65 316 1 254 2.19e-42 150
Msa1228660 AT4G25300.1 28.779 344 228 9 38 373 22 356 2.49e-42 151
Msa1228660 AT3G19000.1 30.844 308 183 7 67 354 32 329 6.16e-41 147
Msa1228660 AT1G12010.1 33.969 262 157 9 62 316 2 254 7.49e-41 146
Msa1228660 AT1G17010.1 28.889 315 206 8 67 373 54 358 1.47e-40 147
Msa1228660 AT4G22880.1 29.912 341 215 9 33 356 7 340 2.95e-40 146
Msa1228660 AT4G22880.2 29.912 341 215 9 33 356 7 340 2.95e-40 146
Msa1228660 AT4G22880.3 29.912 341 215 9 33 356 7 340 2.95e-40 146
Msa1228660 AT1G05010.1 35.357 280 158 12 66 337 3 267 3.78e-40 145
Msa1228660 AT5G08640.2 31.313 297 182 8 66 353 42 325 1.79e-39 143
Msa1228660 AT5G08640.1 31.313 297 182 8 66 353 42 325 1.79e-39 143
Msa1228660 AT3G51240.1 31.119 286 184 6 39 315 10 291 2.73e-39 143
Msa1228660 AT3G55970.1 29.330 358 228 12 31 372 12 360 3.39e-39 143
Msa1228660 AT4G25420.1 30.000 310 193 5 59 354 53 352 3.98e-39 143
Msa1228660 AT3G19010.1 31.773 299 175 8 67 346 28 316 5.63e-39 142
Msa1228660 AT3G19010.4 31.773 299 175 8 67 346 28 316 5.63e-39 142
Msa1228660 AT5G20400.1 28.902 346 227 8 33 369 9 344 1.62e-38 141
Msa1228660 AT5G07480.1 31.000 300 186 7 67 354 44 334 8.09e-38 139
Msa1228660 AT5G63590.1 33.657 309 178 10 57 353 4 297 9.24e-38 138
Msa1228660 AT3G60290.1 28.926 363 236 12 20 372 3 353 3.20e-37 138
Msa1228660 AT5G05600.2 32.210 267 171 6 31 288 25 290 5.98e-37 135
Msa1228660 AT1G15550.1 33.987 306 162 15 66 354 56 338 1.59e-36 136
Msa1228660 AT4G21200.1 29.321 324 190 7 38 353 21 313 4.18e-36 134
Msa1228660 AT3G21420.1 28.493 365 230 13 21 369 9 358 4.70e-36 135
Msa1228660 AT1G80340.1 33.227 313 171 13 59 355 42 332 3.49e-35 132
Msa1228660 AT1G78550.2 27.817 284 187 7 98 373 5 278 5.64e-35 130
Msa1228660 AT1G80330.1 33.117 308 166 13 66 354 48 334 7.96e-35 131
Msa1228660 AT5G12270.1 30.000 370 226 12 20 373 7 359 1.17e-34 131
Msa1228660 AT4G16330.1 30.943 265 156 9 117 369 5 254 1.25e-33 125
Msa1228660 AT1G60980.1 29.091 330 205 8 59 371 49 366 3.49e-33 127
Msa1228660 AT1G50960.1 30.224 268 183 4 50 315 23 288 8.34e-33 125
Msa1228660 AT3G19010.3 32.639 288 157 12 67 346 28 286 9.34e-33 125
Msa1228660 AT5G20550.1 29.739 306 198 8 65 361 43 340 1.02e-32 125
Msa1228660 AT5G07200.1 29.513 349 220 10 22 354 15 353 1.42e-32 125
Msa1228660 AT2G19590.1 29.779 272 168 10 62 323 6 264 4.55e-32 123
Msa1228660 AT3G19000.2 28.631 241 150 5 67 288 32 269 1.33e-31 121
Msa1228660 AT5G63600.1 26.861 309 200 9 54 354 20 310 5.49e-31 120
Msa1228660 AT1G49390.1 27.139 339 229 8 33 361 9 339 1.34e-30 120
Msa1228660 AT4G25420.2 30.417 240 149 4 59 284 53 288 7.35e-30 117
Msa1228660 AT5G63600.2 26.774 310 200 10 54 354 20 311 8.94e-30 117
Msa1228660 AT4G25310.2 28.060 335 195 12 45 373 31 325 1.84e-29 116
Msa1228660 AT4G25300.2 33.673 196 122 3 180 373 73 262 6.48e-29 113
Msa1228660 AT5G54000.2 28.664 307 201 8 64 361 43 340 2.01e-28 114
Msa1228660 AT5G63595.1 27.138 269 175 5 43 311 2 249 2.39e-28 112
Msa1228660 AT5G51810.1 28.105 306 190 8 64 354 60 350 2.48e-28 114
Msa1228660 AT1G30040.1 27.848 316 185 10 66 362 30 321 4.24e-28 113
Msa1228660 AT3G55970.2 29.412 272 177 9 31 288 12 282 2.06e-27 110
Msa1228660 AT3G51240.2 34.731 167 101 4 156 315 42 207 2.27e-27 109
Msa1228660 AT3G19010.2 29.098 244 150 6 67 291 28 267 1.40e-26 107
Msa1228660 AT4G21690.1 27.653 311 180 13 67 355 47 334 1.31e-25 106
Msa1228660 AT1G78440.1 26.087 322 186 12 67 363 18 312 3.69e-24 102
Msa1228660 AT5G07480.2 32.979 188 112 5 174 354 45 225 8.04e-24 99.4
Msa1228660 AT5G43935.1 26.333 300 174 10 67 354 19 283 2.22e-23 99.0
Msa1228660 AT1G47990.1 29.377 337 173 15 67 372 15 317 2.59e-23 99.4
Msa1228660 AT1G44090.1 27.564 312 189 10 59 349 55 350 3.68e-23 100
Msa1228660 AT2G19590.2 29.787 235 144 9 99 323 26 249 4.31e-23 98.2
Msa1228660 AT1G49390.2 27.239 268 179 7 102 361 1 260 1.99e-22 95.9
Msa1228660 AT5G51810.2 28.395 243 150 7 64 291 60 293 3.15e-22 95.9
Msa1228660 AT4G23340.1 30.065 306 181 13 63 354 6 292 1.18e-21 94.7
Msa1228660 AT2G34555.1 26.708 322 178 11 67 362 27 316 2.21e-21 94.4
Msa1228660 AT5G54000.1 28.253 269 175 8 102 361 1 260 2.94e-21 92.8
Msa1228660 AT5G63580.2 28.261 230 151 6 66 288 18 240 5.40e-21 91.3
Msa1228660 AT5G63580.1 28.761 226 147 6 66 284 18 236 8.06e-21 90.9
Msa1228660 AT1G14130.1 26.087 299 177 12 67 349 9 279 1.54e-19 88.6
Msa1228660 AT5G58660.1 26.444 329 180 12 65 360 32 331 2.09e-19 89.0
Msa1228660 AT5G51310.1 26.349 315 187 11 65 354 3 297 8.12e-19 86.7
Msa1228660 AT1G30040.2 26.446 242 141 8 66 288 30 253 1.45e-18 85.1
Msa1228660 AT1G14120.2 25.000 300 179 14 67 349 8 278 3.31e-18 84.7
Msa1228660 AT1G14120.1 25.000 300 179 14 67 349 8 278 3.31e-18 84.7
Msa1228660 AT1G14120.3 25.000 300 179 14 67 349 8 278 3.31e-18 84.7
Msa1228660 AT4G23340.2 33.146 178 105 6 185 354 3 174 1.28e-17 80.9
Msa1228660 AT3G47190.1 22.442 303 192 11 56 334 20 303 1.81e-17 82.8
Msa1228660 AT2G06960.1 38.636 132 61 5 228 359 33 144 1.66e-16 76.3
Msa1228660 AT1G52820.1 23.220 323 214 9 65 371 10 314 5.27e-16 78.6
Msa1228660 AT1G02400.1 26.377 345 186 16 50 363 12 319 2.00e-15 77.0
Msa1228660 AT3G46490.1 24.695 328 212 8 57 358 2 320 4.13e-14 73.2
Msa1228660 AT3G46490.2 25.517 290 186 7 57 320 2 287 4.53e-14 72.8
Msa1228660 AT5G58660.2 25.781 256 145 10 65 288 32 274 9.12e-14 71.2
Msa1228660 AT1G35190.2 25.680 331 176 14 61 360 3 294 3.42e-13 70.1
Msa1228660 AT4G16765.6 26.396 197 129 5 167 354 47 236 5.93e-13 68.6
Msa1228660 AT4G16765.1 26.396 197 129 5 167 354 47 236 5.93e-13 68.6
Msa1228660 AT4G16765.2 26.396 197 129 5 167 354 47 236 5.93e-13 68.6
Msa1228660 AT4G03070.1 28.351 194 124 5 186 371 133 319 7.80e-13 69.3
Msa1228660 AT1G35190.1 25.610 328 203 11 61 360 3 317 1.47e-12 68.6
Msa1228660 AT4G16765.3 28.571 161 104 4 167 318 47 205 2.12e-12 66.6
Msa1228660 AT3G46500.4 35.433 127 70 3 239 360 60 179 2.33e-12 65.9
Msa1228660 AT3G46500.10 35.433 127 70 3 239 360 122 241 5.09e-12 65.9
Msa1228660 AT3G46500.1 35.433 127 70 3 239 360 122 241 5.09e-12 65.9
Msa1228660 AT4G16765.5 34.146 123 69 4 237 354 75 190 5.66e-12 64.7

Find 99 sgRNAs with CRISPR-Local

Find 290 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCACAGAAAATAAAGAATT+TGG 0.091695 8_2:+4147611 Msa1228660:CDS
CATGGCATGCACTTTGAATT+TGG 0.153051 8_2:-4147121 None:intergenic
AAGTTCTTCATGAAGATAAA+TGG 0.210423 8_2:+4147835 Msa1228660:CDS
TCTGAAAGCAGCTCCTTAAT+AGG 0.215561 8_2:-4148626 None:intergenic
CATTACCATAAAAGATTTCT+TGG 0.225535 8_2:+4148673 Msa1228660:CDS
GTCAAAGGTTTGGTGGAGTC+TGG 0.226876 8_2:+4146957 Msa1228660:CDS
CCCTGAACCTGAATTAACTA+TGG 0.268558 8_2:+4147746 Msa1228660:CDS
AAAGGTTTATGGCCCTATTA+AGG 0.285798 8_2:+4148613 Msa1228660:CDS
AATTAGTGGTTTCCTCTAAT+TGG 0.291896 8_2:-4146881 None:intergenic
CCCATAGTTAATTCAGGTTC+AGG 0.297523 8_2:-4147747 None:intergenic
GTCTTGGATGAAATGATTAA+TGG 0.300053 8_2:+4147188 Msa1228660:CDS
TTCAAATTACACAAATAATC+AGG 0.308076 8_2:-4146715 None:intergenic
TTAGTGGAAAACCTGCTAAT+TGG 0.309083 8_2:+4147309 Msa1228660:CDS
CATATTGGTGGCACTTCATC+TGG 0.309175 8_2:-4147374 None:intergenic
GTCGAGCCCATAGTTAATTC+AGG 0.309585 8_2:-4147753 None:intergenic
CCTTCTTACCTCAAAGAGTT+TGG 0.316249 8_2:+4147678 Msa1228660:CDS
GAAGGTACATCAAAGGTTTA+TGG 0.317293 8_2:+4148602 Msa1228660:CDS
TATTGTGACTCTACACAATA+TGG 0.330322 8_2:-4146804 None:intergenic
AGATTTCCAACTTCCCAGTA+TGG 0.360075 8_2:-4147004 None:intergenic
TCAAAGGTTTGGTGGAGTCT+GGG 0.361579 8_2:+4146958 Msa1228660:CDS
TCACAGAAAATAAAGAATTT+GGG 0.361920 8_2:+4147612 Msa1228660:CDS
AATACTTAACTTGGACTCAT+TGG 0.362533 8_2:-4147039 None:intergenic
GTCACAATACACTTCTATTC+TGG 0.363544 8_2:+4146818 Msa1228660:five_prime_UTR
TCTAACGTACTCTTGTTTAG+TGG 0.363658 8_2:+4147293 Msa1228660:CDS
GGAATTACTACCAATAGAAT+TGG 0.370957 8_2:-4146783 None:intergenic
TCTCTCCTGTCCAATTCTAT+TGG 0.378305 8_2:+4146773 Msa1228660:five_prime_UTR
TGAGTTCATTACCTGCATAT+TGG 0.379416 8_2:-4147389 None:intergenic
GCTGAAGGACTATTTACTTT+GGG 0.382708 8_2:+4147705 Msa1228660:CDS
ATTCCACGCATGTTCCATAC+TGG 0.388165 8_2:+4146990 Msa1228660:CDS
CAGCACAACCAAACTCTTTG+AGG 0.389498 8_2:-4147686 None:intergenic
TCTATCATAAGTGGAATTAG+TGG 0.391072 8_2:-4146895 None:intergenic
CCAAACTCTTTGAGGTAAGA+AGG 0.398784 8_2:-4147678 None:intergenic
TGCTGAAGGACTATTTACTT+TGG 0.400034 8_2:+4147704 Msa1228660:CDS
ATTTCATCCAAGACATTAAC+GGG 0.401594 8_2:-4147179 None:intergenic
ATGGTAATGTCTTTGTAGAT+TGG 0.407974 8_2:-4148659 None:intergenic
CTGAAAGCAGCTCCTTAATA+GGG 0.413109 8_2:-4148625 None:intergenic
TGAAATTCCCGTTAATGTCT+TGG 0.414215 8_2:+4147172 Msa1228660:CDS
GAGAGAACATTAAAATAGAA+TGG 0.427386 8_2:-4146756 None:intergenic
ACCTTTGATGTACCTTCGAT+TGG 0.430847 8_2:-4148596 None:intergenic
TTGTTGAATTCACAACTTGA+AGG 0.434509 8_2:-4148741 None:intergenic
AAAAGTAGGTGTCAAAGGTT+TGG 0.437565 8_2:+4146947 Msa1228660:CDS
GGCACTTCATCTGGTTTGAA+TGG 0.438830 8_2:-4147365 None:intergenic
CATTTCATCCAAGACATTAA+CGG 0.440138 8_2:-4147180 None:intergenic
AAAGAGTTTGGTTGTGCTGA+AGG 0.454678 8_2:+4147690 Msa1228660:CDS
GCTAATTGGAGAGATACATT+TGG 0.455532 8_2:+4147323 Msa1228660:CDS
AGTTCTTCATGAAGATAAAT+GGG 0.458589 8_2:+4147836 Msa1228660:CDS
TTCAAAGTGCATGCCATGAG+TGG 0.459370 8_2:+4147126 Msa1228660:CDS
CCTTTGATGTACCTTCGATT+GGG 0.465751 8_2:-4148595 None:intergenic
AAGCTCGCTACAGAAATTCT+CGG 0.467907 8_2:-4148554 None:intergenic
AATGTATCTCTCCAATTAGC+AGG 0.471293 8_2:-4147320 None:intergenic
TTCAACTTCTCTATCATAAG+TGG 0.471483 8_2:-4146904 None:intergenic
CCTTAATGGAAAATCTTCCT+TGG 0.479612 8_2:+4148715 Msa1228660:CDS
CATGTTCCATACTGGGAAGT+TGG 0.485930 8_2:+4146998 Msa1228660:CDS
AGAGAACATTAAAATAGAAT+GGG 0.491118 8_2:-4146755 None:intergenic
GTCAACGTTCCTCCGGTACA+TGG 0.499108 8_2:+4147858 Msa1228660:CDS
GTAATGTCTTTGTAGATTGG+TGG 0.503861 8_2:-4148656 None:intergenic
CCATAGTTAATTCAGGTTCA+GGG 0.505790 8_2:-4147746 None:intergenic
GAAAGTACTATCAGTATGCT+TGG 0.508794 8_2:-4147775 None:intergenic
TATGTCTTTGAGATCTATGA+TGG 0.510723 8_2:-4147063 None:intergenic
TCATCTGGTTTGAATGGATG+AGG 0.513909 8_2:-4147359 None:intergenic
TATGATGGGAATACTTAACT+TGG 0.515210 8_2:-4147048 None:intergenic
TGTTGAATTCACAACTTGAA+GGG 0.521306 8_2:-4148740 None:intergenic
GATTCAAAAGTAGGTGTCAA+AGG 0.522120 8_2:+4146942 Msa1228660:CDS
TCAAATTACACAAATAATCA+GGG 0.524488 8_2:-4146714 None:intergenic
CAAACTCTTTGAGGTAAGAA+GGG 0.525173 8_2:-4147677 None:intergenic
ATGAAGTGCCACCAATATGC+AGG 0.527149 8_2:+4147378 Msa1228660:CDS
TAATGTCTTTGTAGATTGGT+GGG 0.528678 8_2:-4148655 None:intergenic
GTTCATTACCTGCATATTGG+TGG 0.532980 8_2:-4147386 None:intergenic
TACTACCAATAGAATTGGAC+AGG 0.534733 8_2:-4146778 None:intergenic
AGCTCGCTACAGAAATTCTC+GGG 0.537172 8_2:-4148553 None:intergenic
GTTAATTCAGGTTCAGGGCA+TGG 0.544520 8_2:-4147741 None:intergenic
CAAAGGTTTGGTGGAGTCTG+GGG 0.546548 8_2:+4146959 Msa1228660:CDS
TAAATGGGTCAACGTTCCTC+CGG 0.549817 8_2:+4147851 Msa1228660:CDS
ATTACCTCTACACGTCGAGC+TGG 0.554369 8_2:-4147095 None:intergenic
AGTAGGTGTCAAAGGTTTGG+TGG 0.561816 8_2:+4146950 Msa1228660:CDS
CCTGAACCTGAATTAACTAT+GGG 0.563014 8_2:+4147747 Msa1228660:CDS
CAATCCAGCTCGACGTGTAG+AGG 0.563713 8_2:+4147091 Msa1228660:CDS
TCAAAGTGCATGCCATGAGT+GGG 0.564534 8_2:+4147127 Msa1228660:CDS
GGAGCTCTTGTTGTAAACAT+AGG 0.566116 8_2:+4147879 Msa1228660:CDS
AATCTTTGAGTTGTTGTCAG+AGG 0.567229 8_2:+4147641 Msa1228660:CDS
CTTCTACAAGACCAACTTGG+TGG 0.571483 8_2:+4147807 Msa1228660:CDS
ACAACAAGAGCTCCATGTAC+CGG 0.571827 8_2:-4147870 None:intergenic
TTTGTGTAATTTGAATACAT+TGG 0.578222 8_2:+4146723 Msa1228660:five_prime_UTR
TTACTTCTACAAGACCAACT+TGG 0.578576 8_2:+4147804 Msa1228660:CDS
CTATGTGTTGTGCTAAGACT+CGG 0.578926 8_2:-4148529 None:intergenic
GAGTTGTTGTCAGAGGCACT+AGG 0.582282 8_2:+4147648 Msa1228660:CDS
TCACAACTTGAAGGGCTCCA+AGG 0.582867 8_2:-4148732 None:intergenic
TTCCACGCATGTTCCATACT+GGG 0.591560 8_2:+4146991 Msa1228660:CDS
GAACTTGAAGACCACCAAGT+TGG 0.601982 8_2:-4147818 None:intergenic
AAACATAGGAGATCTTCTAC+AGG 0.605442 8_2:+4147893 Msa1228660:CDS
TTTACCACCATGTTAAGAGG+GGG 0.612789 8_2:-4146849 None:intergenic
AATTCTCGTGACCCAATCGA+AGG 0.625340 8_2:+4148584 Msa1228660:CDS
CCCAATCGAAGGTACATCAA+AGG 0.628502 8_2:+4148595 Msa1228660:CDS
CGAGTCTTAGCACAACACAT+AGG 0.644734 8_2:+4148530 Msa1228660:CDS
TTCCCAGTATGGAACATGCG+TGG 0.650649 8_2:-4146993 None:intergenic
CAAAGTGCATGCCATGAGTG+GGG 0.653741 8_2:+4147128 Msa1228660:CDS
AATTCAGGTTCAGGGCATGG+TGG 0.681896 8_2:-4147738 None:intergenic
ATGTCTTTGAGATCTATGAT+GGG 0.696806 8_2:-4147062 None:intergenic
ACAAGAGCTCCATGTACCGG+AGG 0.701011 8_2:-4147867 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTAATACTAAAATTTTTGT+TGG - chr8_2:4147970-4147989 None:intergenic 10.0%
!! CTCTTAATAATTATATAAAA+AGG + chr8_2:4148187-4148206 Msa1228660:intron 10.0%
!!! TTTAATACTAAAATTTTTGT+TGG - chr8_2:4147970-4147989 None:intergenic 10.0%
!! CTCTTAATAATTATATAAAA+AGG + chr8_2:4148187-4148206 Msa1228660:intron 10.0%
!! TAATGAACTCAATATTAATT+TGG + chr8_2:4147401-4147420 Msa1228660:intron 15.0%
!! TCAAATTTAATTGTATATCT+AGG + chr8_2:4147446-4147465 Msa1228660:intron 15.0%
!! CATATATAATCCATAAATAA+AGG - chr8_2:4147472-4147491 None:intergenic 15.0%
!! TTAAGCTTAAAAATATGTTA+TGG + chr8_2:4148110-4148129 Msa1228660:intron 15.0%
!! TAATGAACTCAATATTAATT+TGG + chr8_2:4147401-4147420 Msa1228660:intron 15.0%
!! TCAAATTTAATTGTATATCT+AGG + chr8_2:4147446-4147465 Msa1228660:intron 15.0%
!! CATATATAATCCATAAATAA+AGG - chr8_2:4147472-4147491 None:intergenic 15.0%
!! TTAAGCTTAAAAATATGTTA+TGG + chr8_2:4148110-4148129 Msa1228660:intron 15.0%
!! TTTGTGTAATTTGAATACAT+TGG + chr8_2:4146723-4146742 Msa1228660:five_prime_UTR 20.0%
!! AGAGAACATTAAAATAGAAT+GGG - chr8_2:4146758-4146777 None:intergenic 20.0%
!! TGAATTATTATAGTCATTGA+TGG + chr8_2:4147551-4147570 Msa1228660:intron 20.0%
!! TTCACAGAAAATAAAGAATT+TGG + chr8_2:4147611-4147630 Msa1228660:CDS 20.0%
!! TCACAGAAAATAAAGAATTT+GGG + chr8_2:4147612-4147631 Msa1228660:CDS 20.0%
!! ATATTCTAAGTCCAAATATA+AGG + chr8_2:4147919-4147938 Msa1228660:intron 20.0%
!!! GAATATTGTTTTGAATCTTA+TGG - chr8_2:4148139-4148158 None:intergenic 20.0%
!! TCAAAACAATATTCAGTAAA+AGG + chr8_2:4148145-4148164 Msa1228660:intron 20.0%
!! TTAAGTAGATATAACATGTA+TGG - chr8_2:4148254-4148273 None:intergenic 20.0%
!! ATACATGTTATATCTACTTA+AGG + chr8_2:4148253-4148272 Msa1228660:intron 20.0%
!!! AATGATTTTGCTTTTAGAAA+TGG - chr8_2:4148413-4148432 None:intergenic 20.0%
!! TTTGTGTAATTTGAATACAT+TGG + chr8_2:4146723-4146742 Msa1228660:five_prime_UTR 20.0%
!! AGAGAACATTAAAATAGAAT+GGG - chr8_2:4146758-4146777 None:intergenic 20.0%
!! TGAATTATTATAGTCATTGA+TGG + chr8_2:4147551-4147570 Msa1228660:intron 20.0%
!! TTCACAGAAAATAAAGAATT+TGG + chr8_2:4147611-4147630 Msa1228660:CDS 20.0%
!! TCACAGAAAATAAAGAATTT+GGG + chr8_2:4147612-4147631 Msa1228660:CDS 20.0%
!! ATATTCTAAGTCCAAATATA+AGG + chr8_2:4147919-4147938 Msa1228660:intron 20.0%
!!! GAATATTGTTTTGAATCTTA+TGG - chr8_2:4148139-4148158 None:intergenic 20.0%
!! TCAAAACAATATTCAGTAAA+AGG + chr8_2:4148145-4148164 Msa1228660:intron 20.0%
!! TTAAGTAGATATAACATGTA+TGG - chr8_2:4148254-4148273 None:intergenic 20.0%
!! ATACATGTTATATCTACTTA+AGG + chr8_2:4148253-4148272 Msa1228660:intron 20.0%
!!! AATGATTTTGCTTTTAGAAA+TGG - chr8_2:4148413-4148432 None:intergenic 20.0%
! GAGAGAACATTAAAATAGAA+TGG - chr8_2:4146759-4146778 None:intergenic 25.0%
! AAAAAACACAAACCAATTAG+AGG + chr8_2:4146869-4146888 Msa1228660:CDS 25.0%
!!! TAAGAAAAGAGTTTTATACG+CGG + chr8_2:4147243-4147262 Msa1228660:CDS 25.0%
!! TATATCTAGGCCTTTATTTA+TGG + chr8_2:4147459-4147478 Msa1228660:intron 25.0%
! AAGTTCTTCATGAAGATAAA+TGG + chr8_2:4147835-4147854 Msa1228660:CDS 25.0%
! AGTTCTTCATGAAGATAAAT+GGG + chr8_2:4147836-4147855 Msa1228660:CDS 25.0%
!! GGGTTTTACAAAAATAAATG+TGG - chr8_2:4148056-4148075 None:intergenic 25.0%
!!! TAAAACCCCTAATTTTGAAA+AGG + chr8_2:4148068-4148087 Msa1228660:intron 25.0%
!! TTTTGATACACAATTACACA+TGG - chr8_2:4148340-4148359 None:intergenic 25.0%
! CATTACCATAAAAGATTTCT+TGG + chr8_2:4148673-4148692 Msa1228660:CDS 25.0%
! TACACTTATAGCTAAAAACA+TGG - chr8_2:4148790-4148809 None:intergenic 25.0%
! GAGAGAACATTAAAATAGAA+TGG - chr8_2:4146759-4146778 None:intergenic 25.0%
! AAAAAACACAAACCAATTAG+AGG + chr8_2:4146869-4146888 Msa1228660:CDS 25.0%
!!! TAAGAAAAGAGTTTTATACG+CGG + chr8_2:4147243-4147262 Msa1228660:CDS 25.0%
!! TATATCTAGGCCTTTATTTA+TGG + chr8_2:4147459-4147478 Msa1228660:intron 25.0%
! AAGTTCTTCATGAAGATAAA+TGG + chr8_2:4147835-4147854 Msa1228660:CDS 25.0%
! AGTTCTTCATGAAGATAAAT+GGG + chr8_2:4147836-4147855 Msa1228660:CDS 25.0%
!! GGGTTTTACAAAAATAAATG+TGG - chr8_2:4148056-4148075 None:intergenic 25.0%
!!! TAAAACCCCTAATTTTGAAA+AGG + chr8_2:4148068-4148087 Msa1228660:intron 25.0%
!! TTTTGATACACAATTACACA+TGG - chr8_2:4148340-4148359 None:intergenic 25.0%
! CATTACCATAAAAGATTTCT+TGG + chr8_2:4148673-4148692 Msa1228660:CDS 25.0%
! TACACTTATAGCTAAAAACA+TGG - chr8_2:4148790-4148809 None:intergenic 25.0%
GGAATTACTACCAATAGAAT+TGG - chr8_2:4146786-4146805 None:intergenic 30.0%
TATTGTGACTCTACACAATA+TGG - chr8_2:4146807-4146826 None:intergenic 30.0%
! TTTTTACCACCATGTTAAGA+GGG - chr8_2:4146854-4146873 None:intergenic 30.0%
!!! TTTTTTACCACCATGTTAAG+AGG - chr8_2:4146855-4146874 None:intergenic 30.0%
AATTAGTGGTTTCCTCTAAT+TGG - chr8_2:4146884-4146903 None:intergenic 30.0%
TCTATCATAAGTGGAATTAG+TGG - chr8_2:4146898-4146917 None:intergenic 30.0%
TTCAACTTCTCTATCATAAG+TGG - chr8_2:4146907-4146926 None:intergenic 30.0%
!! GCTTTTGATGATTCAAAAGT+AGG + chr8_2:4146933-4146952 Msa1228660:CDS 30.0%
! AATACTTAACTTGGACTCAT+TGG - chr8_2:4147042-4147061 None:intergenic 30.0%
! TATGATGGGAATACTTAACT+TGG - chr8_2:4147051-4147070 None:intergenic 30.0%
!! ATGTCTTTGAGATCTATGAT+GGG - chr8_2:4147065-4147084 None:intergenic 30.0%
!! TATGTCTTTGAGATCTATGA+TGG - chr8_2:4147066-4147085 None:intergenic 30.0%
ATTTCATCCAAGACATTAAC+GGG - chr8_2:4147182-4147201 None:intergenic 30.0%
CATTTCATCCAAGACATTAA+CGG - chr8_2:4147183-4147202 None:intergenic 30.0%
GTCTTGGATGAAATGATTAA+TGG + chr8_2:4147188-4147207 Msa1228660:CDS 30.0%
!! AAGAAAAGAGTTTTATACGC+GGG + chr8_2:4147244-4147263 Msa1228660:CDS 30.0%
ATATATGAATTCTCCTCTCA+TGG + chr8_2:4147485-4147504 Msa1228660:intron 30.0%
AAACTTCATTCTTCAAGACT+AGG - chr8_2:4148014-4148033 None:intergenic 30.0%
! TGATGCCTTTTCAAAATTAG+GGG - chr8_2:4148076-4148095 None:intergenic 30.0%
! GTGATGCCTTTTCAAAATTA+GGG - chr8_2:4148077-4148096 None:intergenic 30.0%
! TGTGATGCCTTTTCAAAATT+AGG - chr8_2:4148078-4148097 None:intergenic 30.0%
AAAAGGCCAAAAAAAACAAC+AGG + chr8_2:4148204-4148223 Msa1228660:intron 30.0%
! GGATTTTGCAGATTTTGAAT+TGG - chr8_2:4148233-4148252 None:intergenic 30.0%
TGTATCAAAAACTTGAGTCT+TGG + chr8_2:4148350-4148369 Msa1228660:intron 30.0%
TTATAGTGAACTGCAATTGT+TGG + chr8_2:4148380-4148399 Msa1228660:intron 30.0%
TCTTCATCATTGAAAGTTTG+TGG + chr8_2:4148437-4148456 Msa1228660:intron 30.0%
TAATGTCTTTGTAGATTGGT+GGG - chr8_2:4148658-4148677 None:intergenic 30.0%
! ATGGTAATGTCTTTGTAGAT+TGG - chr8_2:4148662-4148681 None:intergenic 30.0%
TGTTGAATTCACAACTTGAA+GGG - chr8_2:4148743-4148762 None:intergenic 30.0%
TTGTTGAATTCACAACTTGA+AGG - chr8_2:4148744-4148763 None:intergenic 30.0%
GGAATTACTACCAATAGAAT+TGG - chr8_2:4146786-4146805 None:intergenic 30.0%
TATTGTGACTCTACACAATA+TGG - chr8_2:4146807-4146826 None:intergenic 30.0%
! TTTTTACCACCATGTTAAGA+GGG - chr8_2:4146854-4146873 None:intergenic 30.0%
!!! TTTTTTACCACCATGTTAAG+AGG - chr8_2:4146855-4146874 None:intergenic 30.0%
AATTAGTGGTTTCCTCTAAT+TGG - chr8_2:4146884-4146903 None:intergenic 30.0%
TCTATCATAAGTGGAATTAG+TGG - chr8_2:4146898-4146917 None:intergenic 30.0%
TTCAACTTCTCTATCATAAG+TGG - chr8_2:4146907-4146926 None:intergenic 30.0%
!! GCTTTTGATGATTCAAAAGT+AGG + chr8_2:4146933-4146952 Msa1228660:CDS 30.0%
! AATACTTAACTTGGACTCAT+TGG - chr8_2:4147042-4147061 None:intergenic 30.0%
! TATGATGGGAATACTTAACT+TGG - chr8_2:4147051-4147070 None:intergenic 30.0%
!! ATGTCTTTGAGATCTATGAT+GGG - chr8_2:4147065-4147084 None:intergenic 30.0%
!! TATGTCTTTGAGATCTATGA+TGG - chr8_2:4147066-4147085 None:intergenic 30.0%
ATTTCATCCAAGACATTAAC+GGG - chr8_2:4147182-4147201 None:intergenic 30.0%
CATTTCATCCAAGACATTAA+CGG - chr8_2:4147183-4147202 None:intergenic 30.0%
GTCTTGGATGAAATGATTAA+TGG + chr8_2:4147188-4147207 Msa1228660:CDS 30.0%
!! AAGAAAAGAGTTTTATACGC+GGG + chr8_2:4147244-4147263 Msa1228660:CDS 30.0%
ATATATGAATTCTCCTCTCA+TGG + chr8_2:4147485-4147504 Msa1228660:intron 30.0%
AAACTTCATTCTTCAAGACT+AGG - chr8_2:4148014-4148033 None:intergenic 30.0%
! TGATGCCTTTTCAAAATTAG+GGG - chr8_2:4148076-4148095 None:intergenic 30.0%
! GTGATGCCTTTTCAAAATTA+GGG - chr8_2:4148077-4148096 None:intergenic 30.0%
! TGTGATGCCTTTTCAAAATT+AGG - chr8_2:4148078-4148097 None:intergenic 30.0%
AAAAGGCCAAAAAAAACAAC+AGG + chr8_2:4148204-4148223 Msa1228660:intron 30.0%
! GGATTTTGCAGATTTTGAAT+TGG - chr8_2:4148233-4148252 None:intergenic 30.0%
TGTATCAAAAACTTGAGTCT+TGG + chr8_2:4148350-4148369 Msa1228660:intron 30.0%
TTATAGTGAACTGCAATTGT+TGG + chr8_2:4148380-4148399 Msa1228660:intron 30.0%
TCTTCATCATTGAAAGTTTG+TGG + chr8_2:4148437-4148456 Msa1228660:intron 30.0%
TAATGTCTTTGTAGATTGGT+GGG - chr8_2:4148658-4148677 None:intergenic 30.0%
! ATGGTAATGTCTTTGTAGAT+TGG - chr8_2:4148662-4148681 None:intergenic 30.0%
TGTTGAATTCACAACTTGAA+GGG - chr8_2:4148743-4148762 None:intergenic 30.0%
TTGTTGAATTCACAACTTGA+AGG - chr8_2:4148744-4148763 None:intergenic 30.0%
TACTACCAATAGAATTGGAC+AGG - chr8_2:4146781-4146800 None:intergenic 35.0%
GTCACAATACACTTCTATTC+TGG + chr8_2:4146818-4146837 Msa1228660:five_prime_UTR 35.0%
! TTTTACCACCATGTTAAGAG+GGG - chr8_2:4146853-4146872 None:intergenic 35.0%
GATTCAAAAGTAGGTGTCAA+AGG + chr8_2:4146942-4146961 Msa1228660:CDS 35.0%
AAAAGTAGGTGTCAAAGGTT+TGG + chr8_2:4146947-4146966 Msa1228660:CDS 35.0%
TGAAATTCCCGTTAATGTCT+TGG + chr8_2:4147172-4147191 Msa1228660:CDS 35.0%
! TCTAACGTACTCTTGTTTAG+TGG + chr8_2:4147293-4147312 Msa1228660:CDS 35.0%
TTAGTGGAAAACCTGCTAAT+TGG + chr8_2:4147309-4147328 Msa1228660:CDS 35.0%
AATGTATCTCTCCAATTAGC+AGG - chr8_2:4147323-4147342 None:intergenic 35.0%
GCTAATTGGAGAGATACATT+TGG + chr8_2:4147323-4147342 Msa1228660:CDS 35.0%
TGAGTTCATTACCTGCATAT+TGG - chr8_2:4147392-4147411 None:intergenic 35.0%
TTTGATCATGATTCCATGAG+AGG - chr8_2:4147501-4147520 None:intergenic 35.0%
!! AATCTTTGAGTTGTTGTCAG+AGG + chr8_2:4147641-4147660 Msa1228660:CDS 35.0%
!! CAAACTCTTTGAGGTAAGAA+GGG - chr8_2:4147680-4147699 None:intergenic 35.0%
TGCTGAAGGACTATTTACTT+TGG + chr8_2:4147704-4147723 Msa1228660:CDS 35.0%
GCTGAAGGACTATTTACTTT+GGG + chr8_2:4147705-4147724 Msa1228660:CDS 35.0%
! CCATAGTTAATTCAGGTTCA+GGG - chr8_2:4147749-4147768 None:intergenic 35.0%
CCTGAACCTGAATTAACTAT+GGG + chr8_2:4147747-4147766 Msa1228660:CDS 35.0%
!! GAAAGTACTATCAGTATGCT+TGG - chr8_2:4147778-4147797 None:intergenic 35.0%
TTACTTCTACAAGACCAACT+TGG + chr8_2:4147804-4147823 Msa1228660:CDS 35.0%
AAACATAGGAGATCTTCTAC+AGG + chr8_2:4147893-4147912 Msa1228660:CDS 35.0%
!!! TGGCAACCTGTTGTTTTTTT+TGG - chr8_2:4148213-4148232 None:intergenic 35.0%
! GAAGGTACATCAAAGGTTTA+TGG + chr8_2:4148602-4148621 Msa1228660:CDS 35.0%
AAAGGTTTATGGCCCTATTA+AGG + chr8_2:4148613-4148632 Msa1228660:CDS 35.0%
GTAATGTCTTTGTAGATTGG+TGG - chr8_2:4148659-4148678 None:intergenic 35.0%
! ATGCGCCAAGAAATCTTTTA+TGG - chr8_2:4148681-4148700 None:intergenic 35.0%
! TTTTATGCAGAAGGCCTTAA+TGG + chr8_2:4148701-4148720 Msa1228660:CDS 35.0%
! CCAAGGAAGATTTTCCATTA+AGG - chr8_2:4148718-4148737 None:intergenic 35.0%
CCTTAATGGAAAATCTTCCT+TGG + chr8_2:4148715-4148734 Msa1228660:CDS 35.0%
TACTACCAATAGAATTGGAC+AGG - chr8_2:4146781-4146800 None:intergenic 35.0%
GTCACAATACACTTCTATTC+TGG + chr8_2:4146818-4146837 Msa1228660:five_prime_UTR 35.0%
! TTTTACCACCATGTTAAGAG+GGG - chr8_2:4146853-4146872 None:intergenic 35.0%
GATTCAAAAGTAGGTGTCAA+AGG + chr8_2:4146942-4146961 Msa1228660:CDS 35.0%
AAAAGTAGGTGTCAAAGGTT+TGG + chr8_2:4146947-4146966 Msa1228660:CDS 35.0%
TGAAATTCCCGTTAATGTCT+TGG + chr8_2:4147172-4147191 Msa1228660:CDS 35.0%
! TCTAACGTACTCTTGTTTAG+TGG + chr8_2:4147293-4147312 Msa1228660:CDS 35.0%
TTAGTGGAAAACCTGCTAAT+TGG + chr8_2:4147309-4147328 Msa1228660:CDS 35.0%
AATGTATCTCTCCAATTAGC+AGG - chr8_2:4147323-4147342 None:intergenic 35.0%
GCTAATTGGAGAGATACATT+TGG + chr8_2:4147323-4147342 Msa1228660:CDS 35.0%
TGAGTTCATTACCTGCATAT+TGG - chr8_2:4147392-4147411 None:intergenic 35.0%
TTTGATCATGATTCCATGAG+AGG - chr8_2:4147501-4147520 None:intergenic 35.0%
!! AATCTTTGAGTTGTTGTCAG+AGG + chr8_2:4147641-4147660 Msa1228660:CDS 35.0%
!! CAAACTCTTTGAGGTAAGAA+GGG - chr8_2:4147680-4147699 None:intergenic 35.0%
TGCTGAAGGACTATTTACTT+TGG + chr8_2:4147704-4147723 Msa1228660:CDS 35.0%
GCTGAAGGACTATTTACTTT+GGG + chr8_2:4147705-4147724 Msa1228660:CDS 35.0%
! CCATAGTTAATTCAGGTTCA+GGG - chr8_2:4147749-4147768 None:intergenic 35.0%
CCTGAACCTGAATTAACTAT+GGG + chr8_2:4147747-4147766 Msa1228660:CDS 35.0%
!! GAAAGTACTATCAGTATGCT+TGG - chr8_2:4147778-4147797 None:intergenic 35.0%
TTACTTCTACAAGACCAACT+TGG + chr8_2:4147804-4147823 Msa1228660:CDS 35.0%
AAACATAGGAGATCTTCTAC+AGG + chr8_2:4147893-4147912 Msa1228660:CDS 35.0%
!!! TGGCAACCTGTTGTTTTTTT+TGG - chr8_2:4148213-4148232 None:intergenic 35.0%
! GAAGGTACATCAAAGGTTTA+TGG + chr8_2:4148602-4148621 Msa1228660:CDS 35.0%
AAAGGTTTATGGCCCTATTA+AGG + chr8_2:4148613-4148632 Msa1228660:CDS 35.0%
GTAATGTCTTTGTAGATTGG+TGG - chr8_2:4148659-4148678 None:intergenic 35.0%
! ATGCGCCAAGAAATCTTTTA+TGG - chr8_2:4148681-4148700 None:intergenic 35.0%
! TTTTATGCAGAAGGCCTTAA+TGG + chr8_2:4148701-4148720 Msa1228660:CDS 35.0%
! CCAAGGAAGATTTTCCATTA+AGG - chr8_2:4148718-4148737 None:intergenic 35.0%
CCTTAATGGAAAATCTTCCT+TGG + chr8_2:4148715-4148734 Msa1228660:CDS 35.0%
TCTCTCCTGTCCAATTCTAT+TGG + chr8_2:4146773-4146792 Msa1228660:five_prime_UTR 40.0%
TTTACCACCATGTTAAGAGG+GGG - chr8_2:4146852-4146871 None:intergenic 40.0%
AGATTTCCAACTTCCCAGTA+TGG - chr8_2:4147007-4147026 None:intergenic 40.0%
CATGGCATGCACTTTGAATT+TGG - chr8_2:4147124-4147143 None:intergenic 40.0%
TCTGAAAAAATCCCCACTCA+TGG - chr8_2:4147142-4147161 None:intergenic 40.0%
! TCATCTGGTTTGAATGGATG+AGG - chr8_2:4147362-4147381 None:intergenic 40.0%
GTTCATTACCTGCATATTGG+TGG - chr8_2:4147389-4147408 None:intergenic 40.0%
!! CCAAACTCTTTGAGGTAAGA+AGG - chr8_2:4147681-4147700 None:intergenic 40.0%
CCTTCTTACCTCAAAGAGTT+TGG + chr8_2:4147678-4147697 Msa1228660:CDS 40.0%
AAAGAGTTTGGTTGTGCTGA+AGG + chr8_2:4147690-4147709 Msa1228660:CDS 40.0%
CCCTGAACCTGAATTAACTA+TGG + chr8_2:4147746-4147765 Msa1228660:CDS 40.0%
! CCCATAGTTAATTCAGGTTC+AGG - chr8_2:4147750-4147769 None:intergenic 40.0%
! GGAGCTCTTGTTGTAAACAT+AGG + chr8_2:4147879-4147898 Msa1228660:CDS 40.0%
CGATTGGACTGCCTTATATT+TGG - chr8_2:4147933-4147952 None:intergenic 40.0%
CTATGTGTTGTGCTAAGACT+CGG - chr8_2:4148532-4148551 None:intergenic 40.0%
AAGCTCGCTACAGAAATTCT+CGG - chr8_2:4148557-4148576 None:intergenic 40.0%
CCTTTGATGTACCTTCGATT+GGG - chr8_2:4148598-4148617 None:intergenic 40.0%
ACCTTTGATGTACCTTCGAT+TGG - chr8_2:4148599-4148618 None:intergenic 40.0%
CTGAAAGCAGCTCCTTAATA+GGG - chr8_2:4148628-4148647 None:intergenic 40.0%
TCTGAAAGCAGCTCCTTAAT+AGG - chr8_2:4148629-4148648 None:intergenic 40.0%
! TTGGCGCATTTTTATGCAGA+AGG + chr8_2:4148692-4148711 Msa1228660:CDS 40.0%
TCTCTCCTGTCCAATTCTAT+TGG + chr8_2:4146773-4146792 Msa1228660:five_prime_UTR 40.0%
TTTACCACCATGTTAAGAGG+GGG - chr8_2:4146852-4146871 None:intergenic 40.0%
AGATTTCCAACTTCCCAGTA+TGG - chr8_2:4147007-4147026 None:intergenic 40.0%
CATGGCATGCACTTTGAATT+TGG - chr8_2:4147124-4147143 None:intergenic 40.0%
TCTGAAAAAATCCCCACTCA+TGG - chr8_2:4147142-4147161 None:intergenic 40.0%
! TCATCTGGTTTGAATGGATG+AGG - chr8_2:4147362-4147381 None:intergenic 40.0%
GTTCATTACCTGCATATTGG+TGG - chr8_2:4147389-4147408 None:intergenic 40.0%
!! CCAAACTCTTTGAGGTAAGA+AGG - chr8_2:4147681-4147700 None:intergenic 40.0%
CCTTCTTACCTCAAAGAGTT+TGG + chr8_2:4147678-4147697 Msa1228660:CDS 40.0%
AAAGAGTTTGGTTGTGCTGA+AGG + chr8_2:4147690-4147709 Msa1228660:CDS 40.0%
CCCTGAACCTGAATTAACTA+TGG + chr8_2:4147746-4147765 Msa1228660:CDS 40.0%
! CCCATAGTTAATTCAGGTTC+AGG - chr8_2:4147750-4147769 None:intergenic 40.0%
! GGAGCTCTTGTTGTAAACAT+AGG + chr8_2:4147879-4147898 Msa1228660:CDS 40.0%
CGATTGGACTGCCTTATATT+TGG - chr8_2:4147933-4147952 None:intergenic 40.0%
CTATGTGTTGTGCTAAGACT+CGG - chr8_2:4148532-4148551 None:intergenic 40.0%
AAGCTCGCTACAGAAATTCT+CGG - chr8_2:4148557-4148576 None:intergenic 40.0%
CCTTTGATGTACCTTCGATT+GGG - chr8_2:4148598-4148617 None:intergenic 40.0%
ACCTTTGATGTACCTTCGAT+TGG - chr8_2:4148599-4148618 None:intergenic 40.0%
CTGAAAGCAGCTCCTTAATA+GGG - chr8_2:4148628-4148647 None:intergenic 40.0%
TCTGAAAGCAGCTCCTTAAT+AGG - chr8_2:4148629-4148648 None:intergenic 40.0%
! TTGGCGCATTTTTATGCAGA+AGG + chr8_2:4148692-4148711 Msa1228660:CDS 40.0%
! GTTGTTTCCCCCTCTTAACA+TGG + chr8_2:4146842-4146861 Msa1228660:exon 45.0%
AGTAGGTGTCAAAGGTTTGG+TGG + chr8_2:4146950-4146969 Msa1228660:CDS 45.0%
!! TCAAAGGTTTGGTGGAGTCT+GGG + chr8_2:4146958-4146977 Msa1228660:CDS 45.0%
ATTCCACGCATGTTCCATAC+TGG + chr8_2:4146990-4147009 Msa1228660:CDS 45.0%
TTCCACGCATGTTCCATACT+GGG + chr8_2:4146991-4147010 Msa1228660:CDS 45.0%
CATGTTCCATACTGGGAAGT+TGG + chr8_2:4146998-4147017 Msa1228660:CDS 45.0%
!! GGACTCATTGGCTGAGTTTT+CGG - chr8_2:4147030-4147049 None:intergenic 45.0%
TTCAAAGTGCATGCCATGAG+TGG + chr8_2:4147126-4147145 Msa1228660:CDS 45.0%
TCAAAGTGCATGCCATGAGT+GGG + chr8_2:4147127-4147146 Msa1228660:CDS 45.0%
! GGCACTTCATCTGGTTTGAA+TGG - chr8_2:4147368-4147387 None:intergenic 45.0%
! CATATTGGTGGCACTTCATC+TGG - chr8_2:4147377-4147396 None:intergenic 45.0%
! ATGAAGTGCCACCAATATGC+AGG + chr8_2:4147378-4147397 Msa1228660:CDS 45.0%
CAGCACAACCAAACTCTTTG+AGG - chr8_2:4147689-4147708 None:intergenic 45.0%
! GTTAATTCAGGTTCAGGGCA+TGG - chr8_2:4147744-4147763 None:intergenic 45.0%
GTCGAGCCCATAGTTAATTC+AGG - chr8_2:4147756-4147775 None:intergenic 45.0%
CTTCTACAAGACCAACTTGG+TGG + chr8_2:4147807-4147826 Msa1228660:CDS 45.0%
GAACTTGAAGACCACCAAGT+TGG - chr8_2:4147821-4147840 None:intergenic 45.0%
TAAATGGGTCAACGTTCCTC+CGG + chr8_2:4147851-4147870 Msa1228660:CDS 45.0%
ACAACAAGAGCTCCATGTAC+CGG - chr8_2:4147873-4147892 None:intergenic 45.0%
GGTAGACCTAAACAAGCGAT+TGG - chr8_2:4147949-4147968 None:intergenic 45.0%
CGAGTCTTAGCACAACACAT+AGG + chr8_2:4148530-4148549 Msa1228660:CDS 45.0%
AGCTCGCTACAGAAATTCTC+GGG - chr8_2:4148556-4148575 None:intergenic 45.0%
AATTCTCGTGACCCAATCGA+AGG + chr8_2:4148584-4148603 Msa1228660:CDS 45.0%
! CCCAATCGAAGGTACATCAA+AGG + chr8_2:4148595-4148614 Msa1228660:CDS 45.0%
! GTTGTTTCCCCCTCTTAACA+TGG + chr8_2:4146842-4146861 Msa1228660:exon 45.0%
AGTAGGTGTCAAAGGTTTGG+TGG + chr8_2:4146950-4146969 Msa1228660:CDS 45.0%
!! TCAAAGGTTTGGTGGAGTCT+GGG + chr8_2:4146958-4146977 Msa1228660:CDS 45.0%
ATTCCACGCATGTTCCATAC+TGG + chr8_2:4146990-4147009 Msa1228660:CDS 45.0%
TTCCACGCATGTTCCATACT+GGG + chr8_2:4146991-4147010 Msa1228660:CDS 45.0%
CATGTTCCATACTGGGAAGT+TGG + chr8_2:4146998-4147017 Msa1228660:CDS 45.0%
!! GGACTCATTGGCTGAGTTTT+CGG - chr8_2:4147030-4147049 None:intergenic 45.0%
TTCAAAGTGCATGCCATGAG+TGG + chr8_2:4147126-4147145 Msa1228660:CDS 45.0%
TCAAAGTGCATGCCATGAGT+GGG + chr8_2:4147127-4147146 Msa1228660:CDS 45.0%
! GGCACTTCATCTGGTTTGAA+TGG - chr8_2:4147368-4147387 None:intergenic 45.0%
! CATATTGGTGGCACTTCATC+TGG - chr8_2:4147377-4147396 None:intergenic 45.0%
! ATGAAGTGCCACCAATATGC+AGG + chr8_2:4147378-4147397 Msa1228660:CDS 45.0%
CAGCACAACCAAACTCTTTG+AGG - chr8_2:4147689-4147708 None:intergenic 45.0%
! GTTAATTCAGGTTCAGGGCA+TGG - chr8_2:4147744-4147763 None:intergenic 45.0%
GTCGAGCCCATAGTTAATTC+AGG - chr8_2:4147756-4147775 None:intergenic 45.0%
CTTCTACAAGACCAACTTGG+TGG + chr8_2:4147807-4147826 Msa1228660:CDS 45.0%
GAACTTGAAGACCACCAAGT+TGG - chr8_2:4147821-4147840 None:intergenic 45.0%
TAAATGGGTCAACGTTCCTC+CGG + chr8_2:4147851-4147870 Msa1228660:CDS 45.0%
ACAACAAGAGCTCCATGTAC+CGG - chr8_2:4147873-4147892 None:intergenic 45.0%
GGTAGACCTAAACAAGCGAT+TGG - chr8_2:4147949-4147968 None:intergenic 45.0%
CGAGTCTTAGCACAACACAT+AGG + chr8_2:4148530-4148549 Msa1228660:CDS 45.0%
AGCTCGCTACAGAAATTCTC+GGG - chr8_2:4148556-4148575 None:intergenic 45.0%
AATTCTCGTGACCCAATCGA+AGG + chr8_2:4148584-4148603 Msa1228660:CDS 45.0%
! CCCAATCGAAGGTACATCAA+AGG + chr8_2:4148595-4148614 Msa1228660:CDS 45.0%
GTTTCCCCCTCTTAACATGG+TGG + chr8_2:4146845-4146864 Msa1228660:exon 50.0%
!! GTCAAAGGTTTGGTGGAGTC+TGG + chr8_2:4146957-4146976 Msa1228660:CDS 50.0%
!! CAAAGGTTTGGTGGAGTCTG+GGG + chr8_2:4146959-4146978 Msa1228660:CDS 50.0%
TTCCCAGTATGGAACATGCG+TGG - chr8_2:4146996-4147015 None:intergenic 50.0%
ATTACCTCTACACGTCGAGC+TGG - chr8_2:4147098-4147117 None:intergenic 50.0%
CAAAGTGCATGCCATGAGTG+GGG + chr8_2:4147128-4147147 Msa1228660:CDS 50.0%
!! GAGTTGTTGTCAGAGGCACT+AGG + chr8_2:4147648-4147667 Msa1228660:CDS 50.0%
! AATTCAGGTTCAGGGCATGG+TGG - chr8_2:4147741-4147760 None:intergenic 50.0%
GGCAGTCCAATCGCTTGTTT+AGG + chr8_2:4147940-4147959 Msa1228660:intron 50.0%
TCACAACTTGAAGGGCTCCA+AGG - chr8_2:4148735-4148754 None:intergenic 50.0%
GTTTCCCCCTCTTAACATGG+TGG + chr8_2:4146845-4146864 Msa1228660:exon 50.0%
!! GTCAAAGGTTTGGTGGAGTC+TGG + chr8_2:4146957-4146976 Msa1228660:CDS 50.0%
!! CAAAGGTTTGGTGGAGTCTG+GGG + chr8_2:4146959-4146978 Msa1228660:CDS 50.0%
TTCCCAGTATGGAACATGCG+TGG - chr8_2:4146996-4147015 None:intergenic 50.0%
ATTACCTCTACACGTCGAGC+TGG - chr8_2:4147098-4147117 None:intergenic 50.0%
CAAAGTGCATGCCATGAGTG+GGG + chr8_2:4147128-4147147 Msa1228660:CDS 50.0%
!! GAGTTGTTGTCAGAGGCACT+AGG + chr8_2:4147648-4147667 Msa1228660:CDS 50.0%
! AATTCAGGTTCAGGGCATGG+TGG - chr8_2:4147741-4147760 None:intergenic 50.0%
GGCAGTCCAATCGCTTGTTT+AGG + chr8_2:4147940-4147959 Msa1228660:intron 50.0%
TCACAACTTGAAGGGCTCCA+AGG - chr8_2:4148735-4148754 None:intergenic 50.0%
CAATCCAGCTCGACGTGTAG+AGG + chr8_2:4147091-4147110 Msa1228660:CDS 55.0%
GTCAACGTTCCTCCGGTACA+TGG + chr8_2:4147858-4147877 Msa1228660:CDS 55.0%
ACAAGAGCTCCATGTACCGG+AGG - chr8_2:4147870-4147889 None:intergenic 55.0%
CAATCCAGCTCGACGTGTAG+AGG + chr8_2:4147091-4147110 Msa1228660:CDS 55.0%
GTCAACGTTCCTCCGGTACA+TGG + chr8_2:4147858-4147877 Msa1228660:CDS 55.0%
ACAAGAGCTCCATGTACCGG+AGG - chr8_2:4147870-4147889 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 4146717 4148837 4146717 ID=Msa1228660;Name=Msa1228660
chr8_2 mRNA 4146717 4148837 4146717 ID=Msa1228660-mRNA-1;Parent=Msa1228660;Name=Msa1228660-mRNA-1;_AED=0.00;_eAED=0.00;_QI=144|1|1|1|1|1|3|83|373
chr8_2 exon 4146717 4147399 4146717 ID=Msa1228660-mRNA-1:exon:1346;Parent=Msa1228660-mRNA-1
chr8_2 exon 4147593 4147914 4147593 ID=Msa1228660-mRNA-1:exon:1347;Parent=Msa1228660-mRNA-1
chr8_2 exon 4148494 4148837 4148494 ID=Msa1228660-mRNA-1:exon:1348;Parent=Msa1228660-mRNA-1
chr8_2 five_prime_UTR 4146717 4146860 4146717 ID=Msa1228660-mRNA-1:five_prime_utr;Parent=Msa1228660-mRNA-1
chr8_2 CDS 4146861 4147399 4146861 ID=Msa1228660-mRNA-1:cds;Parent=Msa1228660-mRNA-1
chr8_2 CDS 4147593 4147914 4147593 ID=Msa1228660-mRNA-1:cds;Parent=Msa1228660-mRNA-1
chr8_2 CDS 4148494 4148754 4148494 ID=Msa1228660-mRNA-1:cds;Parent=Msa1228660-mRNA-1
chr8_2 three_prime_UTR 4148755 4148837 4148755 ID=Msa1228660-mRNA-1:three_prime_utr;Parent=Msa1228660-mRNA-1
Gene Sequence

>Msa1228660

ATGGTGGTAAAAAACACAAACCAATTAGAGGAAACCACTAATTCCACTTATGATAGAGAAGTTGAAGTGAAAGCTTTTGATGATTCAAAAGTAGGTGTCAAAGGTTTGGTGGAGTCTGGGGTGTCGAAGATTCCACGCATGTTCCATACTGGGAAGTTGGAAATCTCCGAAAACTCAGCCAATGAGTCCAAGTTAAGTATTCCCATCATAGATCTCAAAGACATACACAACAATCCAGCTCGACGTGTAGAGGTAATTAGCCAAATTCAAAGTGCATGCCATGAGTGGGGATTTTTTCAGATAATTAATCATGAAATTCCCGTTAATGTCTTGGATGAAATGATTAATGGAATTAGTAAGTTTCACGAACAAGATGCTAATGTAAGAAAAGAGTTTTATACGCGGGATTTGAGCAAAAAAGTTATGTATTACTCTAACGTACTCTTGTTTAGTGGAAAACCTGCTAATTGGAGAGATACATTTGGTTTTGCTATTGCTCCTCATCCATTCAAACCAGATGAAGTGCCACCAATATGCAGAGATATTGTGATTGAATATTCACAGAAAATAAAGAATTTGGGTTTCAAAATCTTTGAGTTGTTGTCAGAGGCACTAGGATTTAACCCTTCTTACCTCAAAGAGTTTGGTTGTGCTGAAGGACTATTTACTTTGGGTCACTTCTATCCACCATGCCCTGAACCTGAATTAACTATGGGCTCGACCAAGCATACTGATAGTACTTTCATGACATTACTTCTACAAGACCAACTTGGTGGTCTTCAAGTTCTTCATGAAGATAAATGGGTCAACGTTCCTCCGGTACATGGAGCTCTTGTTGTAAACATAGGAGATCTTCTACAGCTTATCACAAATGACAAATTTGTAAGTGTTTTTCACCGAGTCTTAGCACAACACATAGGCCCGAGAATTTCTGTAGCGAGCTTCTTTCTGAATTCTCGTGACCCAATCGAAGGTACATCAAAGGTTTATGGCCCTATTAAGGAGCTGCTTTCAGAAGAAAACCCACCAATCTACAAAGACATTACCATAAAAGATTTCTTGGCGCATTTTTATGCAGAAGGCCTTAATGGAAAATCTTCCTTGGAGCCCTTCAAGTTGTGA
Protein sequence

>Msa1228660

MVVKNTNQLEETTNSTYDREVEVKAFDDSKVGVKGLVESGVSKIPRMFHTGKLEISENSANESKLSIPIIDLKDIHNNPARRVEVISQIQSACHEWGFFQIINHEIPVNVLDEMINGISKFHEQDANVRKEFYTRDLSKKVMYYSNVLLFSGKPANWRDTFGFAIAPHPFKPDEVPPICRDIVIEYSQKIKNLGFKIFELLSEALGFNPSYLKEFGCAEGLFTLGHFYPPCPEPELTMGSTKHTDSTFMTLLLQDQLGGLQVLHEDKWVNVPPVHGALVVNIGDLLQLITNDKFVSVFHRVLAQHIGPRISVASFFLNSRDPIEGTSKVYGPIKELLSEENPPIYKDITIKDFLAHFYAEGLNGKSSLEPFKL*