AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1255210


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1255210 MtrunA17_Chr8g0373201 97.771 314 7 0 1 314 1 314 0.0 635
Msa1255210 MtrunA17_Chr5g0404141 64.401 309 107 1 1 309 1 306 9.40e-150 423
Msa1255210 MtrunA17_Chr5g0404211 62.460 309 107 1 1 309 1 300 1.34e-147 417
Msa1255210 MtrunA17_Chr5g0404161 61.187 219 82 1 1 219 11 226 1.04e-96 285
Msa1255210 MtrunA17_Chr3g0136411 37.676 284 158 5 26 305 32 300 8.61e-60 193
Msa1255210 MtrunA17_Chr3g0123881 34.483 290 172 4 19 305 24 298 1.24e-52 175
Msa1255210 MtrunA17_Chr2g0279171 33.968 315 175 9 2 305 9 301 8.61e-50 168
Msa1255210 MtrunA17_Chr5g0426241 31.104 299 176 6 19 307 22 300 2.70e-46 158
Msa1255210 MtrunA17_Chr5g0404171 72.727 88 24 0 220 307 1 88 1.39e-43 145
Msa1255210 MtrunA17_Chr8g0382001 34.375 128 69 1 20 147 23 135 2.03e-20 85.9
Msa1255210 MtrunA17_Chr8g0381981 38.144 97 56 3 212 305 61 156 2.11e-12 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1255210 AT2G18360.1 68.051 313 99 1 1 312 1 313 7.70e-163 456
Msa1255210 AT4G36610.1 66.349 315 105 1 1 315 1 314 1.92e-152 430
Msa1255210 AT2G18360.2 67.279 272 88 1 1 271 1 272 2.33e-138 392
Msa1255210 AT5G21950.1 36.054 294 170 6 19 309 23 301 4.63e-56 184
Msa1255210 AT5G21950.6 36.054 294 170 6 19 309 75 353 2.16e-55 184
Msa1255210 AT4G33180.1 33.898 295 179 5 16 305 21 304 1.44e-54 180
Msa1255210 AT1G78210.1 34.667 300 167 7 17 305 20 301 3.71e-52 174
Msa1255210 AT5G21950.7 35.985 264 155 5 11 271 15 267 3.04e-50 168
Msa1255210 AT4G39955.1 32.215 298 173 7 19 307 22 299 8.41e-46 158
Msa1255210 AT5G09430.1 30.671 313 190 7 3 305 12 307 1.43e-43 152
Msa1255210 AT1G72620.1 30.847 295 175 9 21 305 56 331 1.21e-42 150
Msa1255210 AT1G17430.1 30.519 308 177 10 15 307 46 331 9.66e-40 142
Msa1255210 AT4G33180.2 34.783 207 121 3 16 219 21 216 7.67e-36 129
Msa1255210 AT5G21950.3 34.906 212 126 3 11 221 15 215 7.24e-35 126
Msa1255210 AT5G21950.2 34.906 212 126 3 11 221 15 215 7.24e-35 126
Msa1255210 AT5G21950.5 34.906 212 126 3 11 221 67 267 2.11e-34 127
Msa1255210 AT5G21950.4 34.906 212 126 3 11 221 67 267 2.11e-34 127

Find 67 sgRNAs with CRISPR-Local

Find 620 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATATTACCTGGGTGAAATT+TGG 0.139926 8_2:+53623206 None:intergenic
TTGTTACCTAATTCTGTTAA+AGG 0.173805 8_2:-53625872 Msa1255210:CDS
AGAACAACCACGGGTTTATT+TGG 0.190190 8_2:+53626253 None:intergenic
TTAAGTCCTTTAACAGAATT+AGG 0.213404 8_2:+53625866 None:intergenic
CTTAGCTTAATGAATTAAAT+TGG 0.220300 8_2:-53616788 Msa1255210:three_prime_UTR
TCATAATTTGCCCTGGTTAT+TGG 0.220419 8_2:-53616812 Msa1255210:three_prime_UTR
TACAGAGGATACATCTTCTA+TGG 0.263240 8_2:-53617623 Msa1255210:intron
GAAGTTTATTGCTTCCTTCT+TGG 0.277735 8_2:-53616883 Msa1255210:CDS
GGTTATATCCGGATCCATTT+TGG 0.286701 8_2:-53625960 Msa1255210:CDS
TCCTGAATTGGTTCAAGCTT+TGG 0.318085 8_2:-53625981 Msa1255210:CDS
ACCAAAGCTTGAACCAATTC+AGG 0.325503 8_2:+53625980 None:intergenic
TGTAGGTGATGTTCACAAAT+AGG 0.341498 8_2:-53623286 Msa1255210:intron
AGAATCAGTCATAGCCAAAA+TGG 0.352662 8_2:+53625946 None:intergenic
CGTCACACGTTGTTGAAGTC+TGG 0.360109 8_2:-53616628 Msa1255210:three_prime_UTR
GTTCCAGATCTTCTATTCTT+CGG 0.384407 8_2:-53626151 Msa1255210:CDS
ACGAACTAAAATTCAAATAT+CGG 0.385186 8_2:+53616648 None:intergenic
TAGGTTTCAAGCAGAGTGTT+TGG 0.386443 8_2:-53626095 Msa1255210:CDS
CCCGTGGTTGTTCTAGTACA+TGG 0.391325 8_2:-53626244 Msa1255210:CDS
AGTGTTTGGCCATTGCTTTA+AGG 0.392518 8_2:-53626081 Msa1255210:CDS
GATGCATGGGCTAATGAAAA+TGG 0.402441 8_2:-53626395 Msa1255210:CDS
GTTCAAGCTTTGGTTATATC+CGG 0.415318 8_2:-53625971 Msa1255210:CDS
GAACGAGGTGAGCTATTAGA+TGG 0.417602 8_2:-53623260 Msa1255210:CDS
CCTCCGAAGAATAGAAGATC+TGG 0.418433 8_2:+53626148 None:intergenic
TTCATTAGCCCATGCATCAA+TGG 0.424084 8_2:+53626400 None:intergenic
AGCTGGTCACCTTGTTCACT+TGG 0.434706 8_2:-53616937 Msa1255210:CDS
GCCATTGCTTTAAGGAAACT+TGG 0.437943 8_2:-53626073 Msa1255210:CDS
GTGAGTTCATTGCAAGAACT+TGG 0.443234 8_2:-53625917 Msa1255210:CDS
GGCTGAGATGTATCCTGAAT+TGG 0.452248 8_2:-53625993 Msa1255210:CDS
AAGTCTTTGTGTAAACGATC+CGG 0.465183 8_2:+53625803 None:intergenic
ACTAAAATTCAAATATCGGC+TGG 0.465909 8_2:+53616652 None:intergenic
GGCTTTGTTATGGTCTCTGA+AGG 0.474712 8_2:+53626313 None:intergenic
TGATTCTATCTCTACTGTGT+AGG 0.492993 8_2:+53626360 None:intergenic
GGAGAGGGCACAACGTTTGA+AGG 0.498839 8_2:-53616969 Msa1255210:CDS
TACACAGTAGAGATAGAATC+AGG 0.501725 8_2:-53626358 Msa1255210:CDS
GTCTTGATTAACTTATGTGA+AGG 0.504688 8_2:+53616713 None:intergenic
ACAGAGGATACATCTTCTAT+GGG 0.506859 8_2:-53617622 Msa1255210:intron
AGTCATAGCCAAAATGGATC+CGG 0.512553 8_2:+53625952 None:intergenic
GATTCTATCTCTACTGTGTA+GGG 0.513782 8_2:+53626361 None:intergenic
TTCAACTTCATAATTTGCCC+TGG 0.518902 8_2:-53616819 Msa1255210:three_prime_UTR
TTTGAAGGTATAAAGAAAGC+TGG 0.532621 8_2:-53616954 Msa1255210:CDS
TCTTGATTAACTTATGTGAA+GGG 0.535163 8_2:+53616714 None:intergenic
TTAAGCTAAGACCAATAACC+AGG 0.539160 8_2:+53616801 None:intergenic
AAACACTCTGCTTGAAACCT+AGG 0.543493 8_2:+53626097 None:intergenic
ACCAAGTTTCCTTAAAGCAA+TGG 0.556350 8_2:+53626072 None:intergenic
AGTCTTTGTGTAAACGATCC+GGG 0.560029 8_2:+53625804 None:intergenic
GTATCAAATGACAGGCAACT+AGG 0.560612 8_2:-53616990 Msa1255210:intron
CCAGATCTTCTATTCTTCGG+AGG 0.563133 8_2:-53626148 Msa1255210:CDS
CCATGTTACTATTCCTTCAG+AGG 0.572953 8_2:+53626216 None:intergenic
TGCTTCATTTGACGCCAAGA+AGG 0.573642 8_2:+53616869 None:intergenic
CATGGGCTAATGAAAATGGC+AGG 0.587155 8_2:-53626391 Msa1255210:CDS
AAATGACAGGCAACTAGGAG+AGG 0.595528 8_2:-53616985 Msa1255210:intron
ATGGTCGCTCCAAGTGAACA+AGG 0.615675 8_2:+53616928 None:intergenic
GTAACATGGCAGTTTCAAGT+TGG 0.615961 8_2:-53626202 Msa1255210:CDS
CCTCTGAAGGAATAGTAACA+TGG 0.616910 8_2:-53626216 Msa1255210:CDS
CCATGTACTAGAACAACCAC+GGG 0.619067 8_2:+53626244 None:intergenic
AATCATCATGGTGAATCTTG+TGG 0.619193 8_2:-53626434 Msa1255210:exon
GTGAGAGATAGAAATCATCA+TGG 0.630073 8_2:-53626446 Msa1255210:exon
TTTACACAAAGACTTTCTTG+AGG 0.635532 8_2:-53625795 Msa1255210:intron
ACCATGTACTAGAACAACCA+CGG 0.639608 8_2:+53626243 None:intergenic
TGCAAAACCAAATAAACCCG+TGG 0.661215 8_2:-53626260 Msa1255210:CDS
AATGACAGGCAACTAGGAGA+GGG 0.661901 8_2:-53616984 Msa1255210:intron
TAAGCTAAGACCAATAACCA+GGG 0.681445 8_2:+53616802 None:intergenic
AGACATCTATTGTAGACACA+TGG 0.683319 8_2:+53616909 None:intergenic
CAACATTCCAAATTTCACCC+AGG 0.683392 8_2:-53623213 Msa1255210:intron
CAGAGGATACATCTTCTATG+GGG 0.694300 8_2:-53617621 Msa1255210:CDS
ACAAAACAGAAAGATCACCT+AGG 0.708866 8_2:-53626114 Msa1255210:CDS
TTCACAAATAGGAAAGAACG+AGG 0.731188 8_2:-53623275 Msa1255210:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTAATTTTTATTTTATTT+TGG - chr8_2:53617429-53617448 Msa1255210:intron 0.0%
!!! TTTTATTGAGAAAAAAAAAA+TGG + chr8_2:53617332-53617351 None:intergenic 10.0%
!! ATTTGTTTGATATATAAATT+TGG - chr8_2:53619985-53620004 Msa1255210:intron 10.0%
!! AATAAGAATTCTAAATATTT+GGG + chr8_2:53625157-53625176 None:intergenic 10.0%
!! AAATAAGAATTCTAAATATT+TGG + chr8_2:53625158-53625177 None:intergenic 10.0%
!!! AAATATTTAGAATTCTTATT+TGG - chr8_2:53625157-53625176 Msa1255210:intron 10.0%
!! AAAAAAAATACTTATGAATA+AGG - chr8_2:53625273-53625292 Msa1255210:intron 10.0%
!! TTGATTAAACAAATGAAATT+TGG - chr8_2:53617356-53617375 Msa1255210:intron 15.0%
!! TGATTAAACAAATGAAATTT+GGG - chr8_2:53617357-53617376 Msa1255210:intron 15.0%
!! AAATAAAATGTTGTTATAGT+TGG - chr8_2:53617509-53617528 Msa1255210:intron 15.0%
!!! TGTTACTACTATTTTAAAAA+TGG + chr8_2:53618118-53618137 None:intergenic 15.0%
!!! TTTTTTTTTGAGAGAATTTA+TGG - chr8_2:53618207-53618226 Msa1255210:intron 15.0%
!! CTAACATACAAAATTTAATT+TGG + chr8_2:53618531-53618550 None:intergenic 15.0%
!!! TTTTTATACTCCATTATTTA+TGG + chr8_2:53618655-53618674 None:intergenic 15.0%
!! TTACCTAATAATAATAAAGT+TGG - chr8_2:53618736-53618755 Msa1255210:intron 15.0%
!! AATCCAACTTTATTATTATT+AGG + chr8_2:53618742-53618761 None:intergenic 15.0%
!!! GACATTATTACTTTATTTTT+GGG + chr8_2:53618770-53618789 None:intergenic 15.0%
!!! AGACATTATTACTTTATTTT+TGG + chr8_2:53618771-53618790 None:intergenic 15.0%
!! ATTATATATTGAGTTTGATA+TGG - chr8_2:53619366-53619385 Msa1255210:intron 15.0%
!! GAAATTATAAATTTCAAACA+TGG + chr8_2:53619559-53619578 None:intergenic 15.0%
!! GAGATAAAAAAAAAATAACA+TGG + chr8_2:53619617-53619636 None:intergenic 15.0%
!! ATGAAATTAAAAAAGGATTA+AGG + chr8_2:53619688-53619707 None:intergenic 15.0%
!! TTATTATTGATATTGATAGA+TGG + chr8_2:53622221-53622240 None:intergenic 15.0%
!! TAAGAAATATAATTAGACAA+AGG + chr8_2:53623256-53623275 None:intergenic 15.0%
!!! TCATAAGTATTTTTTTTAGT+GGG + chr8_2:53625270-53625289 None:intergenic 15.0%
!!! TTCATAAGTATTTTTTTTAG+TGG + chr8_2:53625271-53625290 None:intergenic 15.0%
!!! AAATGATCAAATTTTCAAAT+TGG - chr8_2:53625486-53625505 Msa1255210:intron 15.0%
!!! TTAGTTTTTATTGATTTTGT+TGG + chr8_2:53625807-53625826 None:intergenic 15.0%
!!! CTGTATATTTTAATTTTCTT+TGG - chr8_2:53626338-53626357 Msa1255210:CDS 15.0%
!! GATTAAACAAATGAAATTTG+GGG - chr8_2:53617358-53617377 Msa1255210:intron 20.0%
!! AATACAATGTCAAAATATGA+AGG + chr8_2:53617412-53617431 None:intergenic 20.0%
!!! TTAAGCTTTAAAAAATTGCA+TGG + chr8_2:53617625-53617644 None:intergenic 20.0%
!! ATAAAAAAGTCATGTTTGTT+GGG + chr8_2:53618043-53618062 None:intergenic 20.0%
!! AATAAAAAAGTCATGTTTGT+TGG + chr8_2:53618044-53618063 None:intergenic 20.0%
!!! ACTTTTTTTCTTGAGATTTA+TGG - chr8_2:53618176-53618195 Msa1255210:intron 20.0%
!!! TCATTGTCAATATGAATTTT+TGG + chr8_2:53618389-53618408 None:intergenic 20.0%
!!! AATTTTGTATGTTAGTAGAT+AGG - chr8_2:53618536-53618555 Msa1255210:intron 20.0%
!! ATGGAGTATAAAAATAAGAA+TGG - chr8_2:53618661-53618680 Msa1255210:intron 20.0%
!! TGGAGTATAAAAATAAGAAT+GGG - chr8_2:53618662-53618681 Msa1255210:intron 20.0%
!! CATTTAATAAATGATGTATG+TGG + chr8_2:53618926-53618945 None:intergenic 20.0%
!! AATTTGATTATAATAGTGAC+CGG - chr8_2:53618961-53618980 Msa1255210:intron 20.0%
!! GTATAGTTTACGTTATATTT+AGG - chr8_2:53618989-53619008 Msa1255210:intron 20.0%
!! AAATTCATCAGATAAATAAG+TGG - chr8_2:53619077-53619096 Msa1255210:intron 20.0%
!!! TTTTTTTATCTCTTAAGCTT+AGG - chr8_2:53619625-53619644 Msa1255210:intron 20.0%
!! TGAGAGAATGAAATTAAAAA+AGG + chr8_2:53619695-53619714 None:intergenic 20.0%
!! GTAACAAAATTATATTACCT+GGG + chr8_2:53619888-53619907 None:intergenic 20.0%
!! TGTAACAAAATTATATTACC+TGG + chr8_2:53619889-53619908 None:intergenic 20.0%
!!! GGTAATATAATTTTGTTACA+AGG - chr8_2:53619889-53619908 Msa1255210:intron 20.0%
!! GCTTATATATACAATATTGA+AGG + chr8_2:53620209-53620228 None:intergenic 20.0%
!!! CATTTTCTATTTTCCTAATA+TGG - chr8_2:53620261-53620280 Msa1255210:intron 20.0%
!! TGCTAAAAATCATAGAAATA+AGG - chr8_2:53621080-53621099 Msa1255210:intron 20.0%
!!! ATTGATTTAGTGAAAAATGA+AGG + chr8_2:53621950-53621969 None:intergenic 20.0%
!!! AACTCATTCATTTTGATATA+TGG - chr8_2:53622324-53622343 Msa1255210:intron 20.0%
!!! ACTCATTCATTTTGATATAT+GGG - chr8_2:53622325-53622344 Msa1255210:intron 20.0%
!! GTATAGTCAAAAAATATCTA+TGG + chr8_2:53622379-53622398 None:intergenic 20.0%
!! AAATACATAAGAACTGATAA+TGG - chr8_2:53622512-53622531 Msa1255210:intron 20.0%
!! ATATAATTAGACAAAGGATA+AGG + chr8_2:53623250-53623269 None:intergenic 20.0%
!! GGAATTTCAAATTAATGTTT+GGG + chr8_2:53625076-53625095 None:intergenic 20.0%
!! TAGAAATATCAAAAGAAATG+TGG + chr8_2:53625185-53625204 None:intergenic 20.0%
!!! TATAATGTCATGAATTTTGA+AGG + chr8_2:53625213-53625232 None:intergenic 20.0%
!! TATATATGATCAAAGCAATA+AGG + chr8_2:53625404-53625423 None:intergenic 20.0%
!!! CTTTCTGTATTTTTTTCAAA+CGG - chr8_2:53625621-53625640 Msa1255210:intron 20.0%
!! CTTAGCTTAATGAATTAAAT+TGG - chr8_2:53626293-53626312 Msa1255210:CDS 20.0%
!! ACGAACTAAAATTCAAATAT+CGG + chr8_2:53626436-53626455 None:intergenic 20.0%
!! AGGAACAACAATGAATTTTT+GGG - chr8_2:53616743-53616762 Msa1255210:three_prime_UTR 25.0%
!!! TTTTTTCTTTGGCTTTGTTA+TGG + chr8_2:53616781-53616800 None:intergenic 25.0%
!! GGTTTTTCTTCTTTTTTCTT+TGG + chr8_2:53616792-53616811 None:intergenic 25.0%
! GTTGAAAAATGTATTGTTGT+TGG - chr8_2:53617032-53617051 Msa1255210:intron 25.0%
! TTGTTACCTAATTCTGTTAA+AGG - chr8_2:53617209-53617228 Msa1255210:intron 25.0%
! TTAAGTCCTTTAACAGAATT+AGG + chr8_2:53617218-53617237 None:intergenic 25.0%
! AAAAAAATGGTGCAAAACTA+AGG + chr8_2:53617319-53617338 None:intergenic 25.0%
! TTTATAGAATTTCACACGTA+AGG - chr8_2:53617477-53617496 Msa1255210:intron 25.0%
! AAGACTAATAAATGACTTCA+TGG + chr8_2:53617559-53617578 None:intergenic 25.0%
!! AAATGCTTTCTTCTTTTGAA+AGG - chr8_2:53617692-53617711 Msa1255210:intron 25.0%
!!! GATTGCATTTTATTTAGACT+TGG + chr8_2:53617747-53617766 None:intergenic 25.0%
! GAAGAAATTAATGAAGTGAT+GGG + chr8_2:53618073-53618092 None:intergenic 25.0%
! TGAAGAAATTAATGAAGTGA+TGG + chr8_2:53618074-53618093 None:intergenic 25.0%
! TTCATTAATTTCTTCATTGC+TGG - chr8_2:53618078-53618097 Msa1255210:intron 25.0%
!! ACTTATTCAAGTGCATTTTA+GGG + chr8_2:53618442-53618461 None:intergenic 25.0%
!! TACTTATTCAAGTGCATTTT+AGG + chr8_2:53618443-53618462 None:intergenic 25.0%
! GATAACATGACCATAAATAA+TGG - chr8_2:53618642-53618661 Msa1255210:intron 25.0%
! TGAAACAAATTAAAGCAATG+AGG - chr8_2:53618697-53618716 Msa1255210:intron 25.0%
! CATTCAATAAATGATGTATG+TGG - chr8_2:53618887-53618906 Msa1255210:intron 25.0%
!!! AATAAATTTGCTATAGTCGA+GGG + chr8_2:53619149-53619168 None:intergenic 25.0%
!!! AAATAAATTTGCTATAGTCG+AGG + chr8_2:53619150-53619169 None:intergenic 25.0%
! AGATTAATAAGCCTGATTAT+TGG + chr8_2:53619212-53619231 None:intergenic 25.0%
! AGACATGAAAAAAGAAAACT+TGG - chr8_2:53619395-53619414 Msa1255210:intron 25.0%
!!! CACGTTTAAAATTTTTGAGT+TGG - chr8_2:53619431-53619450 Msa1255210:intron 25.0%
!!! AAAATTTTTGAGTTGGTGAA+TGG - chr8_2:53619438-53619457 Msa1255210:intron 25.0%
! ATAATGAAATTGATTGCACA+TGG - chr8_2:53619471-53619490 Msa1255210:intron 25.0%
! TATATATGACTTTAACTACG+TGG - chr8_2:53619767-53619786 Msa1255210:intron 25.0%
! ATTTGTGTGAATTTCTTCTT+TGG - chr8_2:53620517-53620536 Msa1255210:intron 25.0%
!!! TCTATGATTTTTAGCAACTT+TGG + chr8_2:53621076-53621095 None:intergenic 25.0%
! ACTTTATTCAAAGAAGGAAT+GGG + chr8_2:53621180-53621199 None:intergenic 25.0%
! TACTTTATTCAAAGAAGGAA+TGG + chr8_2:53621181-53621200 None:intergenic 25.0%
! GAGTATACTTTATTCAAAGA+AGG + chr8_2:53621186-53621205 None:intergenic 25.0%
! AGATAAAGATTCACATAGTT+TGG + chr8_2:53621922-53621941 None:intergenic 25.0%
!! TTATGTTTGCTAATAGGAAA+AGG + chr8_2:53622287-53622306 None:intergenic 25.0%
!!! CTCATTCATTTTGATATATG+GGG - chr8_2:53622326-53622345 Msa1255210:intron 25.0%
! ATTTAAGAGTAATGTGAAAC+TGG + chr8_2:53622496-53622515 None:intergenic 25.0%
! TGTTGATGCATAATGAAATA+AGG + chr8_2:53622773-53622792 None:intergenic 25.0%
!! CAAAGACTTTGAAAAGATTA+AGG + chr8_2:53622805-53622824 None:intergenic 25.0%
!! CTTAATCTTTTCAAAGTCTT+TGG - chr8_2:53622803-53622822 Msa1255210:intron 25.0%
!!! AAAATAGTTTTTCTAGCTCT+TGG + chr8_2:53622878-53622897 None:intergenic 25.0%
!! AGCTAGAAAAACTATTTTCT+TGG - chr8_2:53622880-53622899 Msa1255210:intron 25.0%
!! GCTAGAAAAACTATTTTCTT+GGG - chr8_2:53622881-53622900 Msa1255210:intron 25.0%
! ACATAATCTTGTAAATGAGA+TGG + chr8_2:53623205-53623224 None:intergenic 25.0%
! ATGTATAAACCAGTTATGAA+TGG + chr8_2:53623632-53623651 None:intergenic 25.0%
! AAGCTTAAAAAGTCTCTTTA+TGG - chr8_2:53623754-53623773 Msa1255210:intron 25.0%
!! TCATCATATCAAAACTGTTT+TGG - chr8_2:53623954-53623973 Msa1255210:intron 25.0%
!! TTGTTTAAAATCAAGGATCT+TGG - chr8_2:53623982-53624001 Msa1255210:intron 25.0%
! AATCAAGGTAATACTTTCTT+TGG + chr8_2:53624068-53624087 None:intergenic 25.0%
! AGAATCATTATGAAGTTCAA+TGG + chr8_2:53624148-53624167 None:intergenic 25.0%
! ATTGAACTTCATAATGATTC+TGG - chr8_2:53624147-53624166 Msa1255210:intron 25.0%
! AAAGAAACAATGACCAAAAA+TGG + chr8_2:53624442-53624461 None:intergenic 25.0%
! AGAAAGAATGAAAAATGCTT+GGG + chr8_2:53624807-53624826 None:intergenic 25.0%
! GCTTATATACACAATATTGA+AGG + chr8_2:53624988-53625007 None:intergenic 25.0%
! GGGTATTATTGAAGATTATT+AGG + chr8_2:53625056-53625075 None:intergenic 25.0%
! GGGAATTTCAAATTAATGTT+TGG + chr8_2:53625077-53625096 None:intergenic 25.0%
! AATTCCCTCATTTCATAAAT+TGG - chr8_2:53625090-53625109 Msa1255210:intron 25.0%
! TAGACCAATTTATGAAATGA+GGG + chr8_2:53625097-53625116 None:intergenic 25.0%
! ATAGACCAATTTATGAAATG+AGG + chr8_2:53625098-53625117 None:intergenic 25.0%
! TGTAAAATACAACCAAAATG+TGG + chr8_2:53625369-53625388 None:intergenic 25.0%
! ATGTTGTTACTCATTAATCA+TGG - chr8_2:53625432-53625451 Msa1255210:intron 25.0%
! CAGAAAGAATATTATTGTCA+TGG + chr8_2:53625608-53625627 None:intergenic 25.0%
!! TTACGTCGTTTATGTTTTAT+CGG + chr8_2:53625691-53625710 None:intergenic 25.0%
! TAGAGAAGAATATATCAAGT+GGG + chr8_2:53626028-53626047 None:intergenic 25.0%
! ATAGAGAAGAATATATCAAG+TGG + chr8_2:53626029-53626048 None:intergenic 25.0%
! TTTCTTATGTATCAAATGAC+AGG - chr8_2:53626083-53626102 Msa1255210:CDS 25.0%
! TCTTGATTAACTTATGTGAA+GGG + chr8_2:53626370-53626389 None:intergenic 25.0%
! CAGGAACAACAATGAATTTT+TGG - chr8_2:53616742-53616761 Msa1255210:three_prime_UTR 30.0%
!!! TTTGGTTTTGCAGTGATTTT+GGG + chr8_2:53616813-53616832 None:intergenic 30.0%
!!! ATTTGGTTTTGCAGTGATTT+TGG + chr8_2:53616814-53616833 None:intergenic 30.0%
!!! ATTGTTGTTGGTTTTAGCTA+TGG - chr8_2:53617044-53617063 Msa1255210:intron 30.0%
!!! TGGAATGGTTGCTTTTAAAA+TGG - chr8_2:53617067-53617086 Msa1255210:intron 30.0%
TTTACACAAAGACTTTCTTG+AGG - chr8_2:53617286-53617305 Msa1255210:intron 30.0%
!! TGAGTTTGAACCTATTTTGA+GGG + chr8_2:53617851-53617870 None:intergenic 30.0%
! TTGAGTTTGAACCTATTTTG+AGG + chr8_2:53617852-53617871 None:intergenic 30.0%
GGAGACAATCTACAATAAAT+TGG + chr8_2:53618022-53618041 None:intergenic 30.0%
ATTAATTTCTTCATTGCTGG+AGG - chr8_2:53618081-53618100 Msa1255210:intron 30.0%
!! TGCATTTTAGGGATGATATT+AGG + chr8_2:53618431-53618450 None:intergenic 30.0%
ATACAAAACAACACTGTTCT+CGG - chr8_2:53618468-53618487 Msa1255210:intron 30.0%
TTTGTATGTTAGTAGATAGG+TGG - chr8_2:53618539-53618558 Msa1255210:intron 30.0%
TTGTATGTTAGTAGATAGGT+GGG - chr8_2:53618540-53618559 Msa1255210:intron 30.0%
TCTCACTTTATCCAATAATC+AGG - chr8_2:53619198-53619217 Msa1255210:intron 30.0%
!!! GTTTTAACTAATAAGCAGAC+TGG + chr8_2:53619307-53619326 None:intergenic 30.0%
GTCTGCTTATTAGTTAAAAC+AGG - chr8_2:53619307-53619326 Msa1255210:intron 30.0%
TGAAAAAAGAAAACTTGGAG+AGG - chr8_2:53619400-53619419 Msa1255210:intron 30.0%
!!! CAACTCAGATGCATTTTTTT+AGG + chr8_2:53619506-53619525 None:intergenic 30.0%
!! TTGAGTATTAGTTTGTTGAG+CGG - chr8_2:53619523-53619542 Msa1255210:intron 30.0%
ATTTCAAACATGGCAACTTT+AGG + chr8_2:53619549-53619568 None:intergenic 30.0%
TAAGCTTAGGTTTGATGTAA+TGG - chr8_2:53619638-53619657 Msa1255210:intron 30.0%
AAGCTTAGGTTTGATGTAAT+GGG - chr8_2:53619639-53619658 Msa1255210:intron 30.0%
TATATTACCTGGGTGAAATT+TGG + chr8_2:53619878-53619897 None:intergenic 30.0%
ATCTTTATCACAGACTGATA+AGG - chr8_2:53620094-53620113 Msa1255210:intron 30.0%
GGAAGAAGCTAAAAATACAA+AGG - chr8_2:53620115-53620134 Msa1255210:intron 30.0%
GTAGTAAACTAAGATTGCTT+GGG + chr8_2:53620158-53620177 None:intergenic 30.0%
TGTAGTAAACTAAGATTGCT+TGG + chr8_2:53620159-53620178 None:intergenic 30.0%
! TATACAATATTGAAGGTGCA+TGG + chr8_2:53620202-53620221 None:intergenic 30.0%
AAAGCTCATGATACCATATT+AGG + chr8_2:53620277-53620296 None:intergenic 30.0%
TAACTAACTTTCCCAAAGAA+GGG + chr8_2:53620304-53620323 None:intergenic 30.0%
GAAGAAGAAACACAGAAAAA+TGG + chr8_2:53620391-53620410 None:intergenic 30.0%
TAATTGGATCCATTGAGTTT+CGG + chr8_2:53620646-53620665 None:intergenic 30.0%
ATGGGAACATTGTAATCATT+TGG - chr8_2:53620774-53620793 Msa1255210:intron 30.0%
!! ATGATTCTGCTTTGGAAATT+TGG - chr8_2:53620854-53620873 Msa1255210:intron 30.0%
TCTATCCATTCGTTGAAATA+AGG - chr8_2:53620937-53620956 Msa1255210:intron 30.0%
! TGTTACCTTATTTCAACGAA+TGG + chr8_2:53620945-53620964 None:intergenic 30.0%
TCACTAAATTGAAAGCTCTT+TGG - chr8_2:53620983-53621002 Msa1255210:intron 30.0%
CACTAAATTGAAAGCTCTTT+GGG - chr8_2:53620984-53621003 Msa1255210:intron 30.0%
!!! ATGATTTTTAGCAACTTTGG+TGG + chr8_2:53621073-53621092 None:intergenic 30.0%
! AATTTTCATTCAAACCAGTG+AGG + chr8_2:53621122-53621141 None:intergenic 30.0%
!! GATTTTTGCTATGAAAAGCA+TGG - chr8_2:53621393-53621412 Msa1255210:intron 30.0%
! ATCAAAAGGTATACCTAAAG+AGG + chr8_2:53621676-53621695 None:intergenic 30.0%
GAATCAATGATCCATGAAAT+AGG + chr8_2:53621705-53621724 None:intergenic 30.0%
!! ATTTCATGGATCATTGATTC+AGG - chr8_2:53621705-53621724 Msa1255210:intron 30.0%
ATGATGAAGATGAAATTGAG+AGG + chr8_2:53621856-53621875 None:intergenic 30.0%
ATAAGGTTCAAGTGAAAATG+AGG + chr8_2:53621891-53621910 None:intergenic 30.0%
AACTTGTCTATGAAGATGAT+TGG - chr8_2:53621984-53622003 Msa1255210:intron 30.0%
ATTGATAGATGGATACAATG+TGG + chr8_2:53622210-53622229 None:intergenic 30.0%
! GAAGCATTATGTTTGCTAAT+AGG + chr8_2:53622293-53622312 None:intergenic 30.0%
GAATAGAAGCAGTAGAAATA+GGG + chr8_2:53622352-53622371 None:intergenic 30.0%
TGAATAGAAGCAGTAGAAAT+AGG + chr8_2:53622353-53622372 None:intergenic 30.0%
ATTTCTACTGCTTCTATTCA+TGG - chr8_2:53622353-53622372 Msa1255210:intron 30.0%
AAGAAACACAGCATGTAAAA+TGG + chr8_2:53622711-53622730 None:intergenic 30.0%
! ACTTTGAAAAGATTAAGGTC+AGG + chr8_2:53622800-53622819 None:intergenic 30.0%
CAGAAGAAGTAACAAAATAC+TGG + chr8_2:53623039-53623058 None:intergenic 30.0%
AAGAAAGAACAAAAGAAGCA+TGG + chr8_2:53623297-53623316 None:intergenic 30.0%
AAGGTTAAATATCATGCTGA+TGG - chr8_2:53623478-53623497 Msa1255210:intron 30.0%
TAAAGGTTACACACAAATTG+AGG - chr8_2:53623534-53623553 Msa1255210:intron 30.0%
AAAGGTTACACACAAATTGA+GGG - chr8_2:53623535-53623554 Msa1255210:intron 30.0%
! TAACTGGTTTATACATCAAC+TGG - chr8_2:53623636-53623655 Msa1255210:intron 30.0%
! TTTTCTTGATGAACAAGGAA+TGG + chr8_2:53623861-53623880 None:intergenic 30.0%
! ATCAGTTTTCTTGATGAACA+AGG + chr8_2:53623866-53623885 None:intergenic 30.0%
!! GGATGACTTGTTTAAAATCA+AGG - chr8_2:53623975-53623994 Msa1255210:intron 30.0%
CAATTAATCTCCTATAAGCA+GGG + chr8_2:53624191-53624210 None:intergenic 30.0%
! ATGTGTATGGAAGATTTTCT+AGG + chr8_2:53624369-53624388 None:intergenic 30.0%
AAATCTTCCATACACATTCA+AGG - chr8_2:53624372-53624391 Msa1255210:intron 30.0%
!! TTTTGGTCATTGTTTCTTTC+TGG - chr8_2:53624443-53624462 Msa1255210:intron 30.0%
! TTTGGTCATTGTTTCTTTCT+GGG - chr8_2:53624444-53624463 Msa1255210:intron 30.0%
TGATTGTCAAAGTAAAGAAC+AGG + chr8_2:53624621-53624640 None:intergenic 30.0%
CAGAAAGAATGAAAAATGCT+TGG + chr8_2:53624808-53624827 None:intergenic 30.0%
TTTATCAACTTCCATCTTGT+TGG - chr8_2:53624850-53624869 Msa1255210:intron 30.0%
TTATCAACTTCCATCTTGTT+GGG - chr8_2:53624851-53624870 Msa1255210:intron 30.0%
GGAAGAAGCTAAAAATACAA+AGG - chr8_2:53620115-53620134 Msa1255210:intron 30.0%
GTAGTAAACTAAGATTGCTT+GGG + chr8_2:53620158-53620177 None:intergenic 30.0%
TGTAGTAAACTAAGATTGCT+TGG + chr8_2:53620159-53620178 None:intergenic 30.0%
TATTTGGGTCAAAACTCAAA+AGG + chr8_2:53625142-53625161 None:intergenic 30.0%
GCTCAAAATATGAAAGAGTA+AGG - chr8_2:53625514-53625533 Msa1255210:intron 30.0%
CTATAATTCTTGTATGTGTG+TGG + chr8_2:53625559-53625578 None:intergenic 30.0%
!!! TTAATTTTTGGTGTTGACGT+TGG + chr8_2:53625833-53625852 None:intergenic 30.0%
AGAGAAGAATATATCAAGTG+GGG + chr8_2:53626027-53626046 None:intergenic 30.0%
! TTTGAAGGTATAAAGAAAGC+TGG - chr8_2:53626127-53626146 Msa1255210:CDS 30.0%
GTCTTGATTAACTTATGTGA+AGG + chr8_2:53626371-53626390 None:intergenic 30.0%
ACTAAAATTCAAATATCGGC+TGG + chr8_2:53626432-53626451 None:intergenic 30.0%
GTGAGAGATAGAAATCATCA+TGG - chr8_2:53616635-53616654 Msa1255210:three_prime_UTR 35.0%
AATCATCATGGTGAATCTTG+TGG - chr8_2:53616647-53616666 Msa1255210:three_prime_UTR 35.0%
CACAAAAACCATTGATGCAT+GGG - chr8_2:53616673-53616692 Msa1255210:three_prime_UTR 35.0%
GATTCTATCTCTACTGTGTA+GGG + chr8_2:53616723-53616742 None:intergenic 35.0%
TGATTCTATCTCTACTGTGT+AGG + chr8_2:53616724-53616743 None:intergenic 35.0%
TACACAGTAGAGATAGAATC+AGG - chr8_2:53616723-53616742 Msa1255210:three_prime_UTR 35.0%
GTTCCAGATCTTCTATTCTT+CGG - chr8_2:53616930-53616949 Msa1255210:CDS 35.0%
! TGATCTTTCTGTTTTGTCTG+TGG + chr8_2:53616964-53616983 None:intergenic 35.0%
ACAAAACAGAAAGATCACCT+AGG - chr8_2:53616967-53616986 Msa1255210:CDS 35.0%
ACCAAGTTTCCTTAAAGCAA+TGG + chr8_2:53617012-53617031 None:intergenic 35.0%
! GTTCAAGCTTTGGTTATATC+CGG - chr8_2:53617110-53617129 Msa1255210:intron 35.0%
AGAATCAGTCATAGCCAAAA+TGG + chr8_2:53617138-53617157 None:intergenic 35.0%
TTGCTGCTCACAAAAAACTT+TGG - chr8_2:53617252-53617271 Msa1255210:intron 35.0%
! TCACAAAAAACTTTGGTTCC+CGG - chr8_2:53617259-53617278 Msa1255210:intron 35.0%
AAGTCTTTGTGTAAACGATC+CGG + chr8_2:53617281-53617300 None:intergenic 35.0%
ATTTCACACGTAAGGAATTG+TGG - chr8_2:53617485-53617504 Msa1255210:intron 35.0%
!! GCTTTCTTCTTTTGAAAGGA+AGG - chr8_2:53617696-53617715 Msa1255210:intron 35.0%
!! TTGAACCTATTTTGAGGGAT+GGG + chr8_2:53617846-53617865 None:intergenic 35.0%
!! TTTGAACCTATTTTGAGGGA+TGG + chr8_2:53617847-53617866 None:intergenic 35.0%
!! TTGAATAGATTGGAGGCATT+TGG + chr8_2:53617931-53617950 None:intergenic 35.0%
!! AAGAGAGGTGTTGAATAGAT+TGG + chr8_2:53617941-53617960 None:intergenic 35.0%
! TTTGTTGGCTGTGATTGATA+GGG + chr8_2:53617969-53617988 None:intergenic 35.0%
!! TTTTGTTGGCTGTGATTGAT+AGG + chr8_2:53617970-53617989 None:intergenic 35.0%
! AGCTTCAAGCTGTATTTTGT+TGG + chr8_2:53617984-53618003 None:intergenic 35.0%
TTGATACTTTCGTGTTTCGT+AGG - chr8_2:53618491-53618510 Msa1255210:intron 35.0%
TGTATGTTAGTAGATAGGTG+GGG - chr8_2:53618541-53618560 Msa1255210:intron 35.0%
! ATTCAAGCTGTGATAACGAT+TGG - chr8_2:53618596-53618615 Msa1255210:intron 35.0%
CCTCACATATCTTCCTATAT+GGG + chr8_2:53618800-53618819 None:intergenic 35.0%
ACCTCACATATCTTCCTATA+TGG + chr8_2:53618801-53618820 None:intergenic 35.0%
TGCTTATAATAGTGACCAGA+GGG + chr8_2:53618848-53618867 None:intergenic 35.0%
TTGCTTATAATAGTGACCAG+AGG + chr8_2:53618849-53618868 None:intergenic 35.0%
TTGATTATAATAGTGACCGG+AGG - chr8_2:53618964-53618983 Msa1255210:intron 35.0%
TGATTATAATAGTGACCGGA+GGG - chr8_2:53618965-53618984 Msa1255210:intron 35.0%
!!! TCTTTTGTGCGCTTTAAAAG+TGG - chr8_2:53619271-53619290 Msa1255210:intron 35.0%
!!! ATTTTTGAGTTGGTGAATGG+TGG - chr8_2:53619441-53619460 Msa1255210:intron 35.0%
TGAAATTGATTGCACATGGT+TGG - chr8_2:53619475-53619494 Msa1255210:intron 35.0%
AGCTTAGGTTTGATGTAATG+GGG - chr8_2:53619640-53619659 Msa1255210:intron 35.0%
TTAACTACGTGGATCATTGT+AGG - chr8_2:53619778-53619797 Msa1255210:intron 35.0%
TGTAGGTGATGTTCACAAAT+AGG - chr8_2:53619795-53619814 Msa1255210:intron 35.0%
TTCACAAATAGGAAAGAACG+AGG - chr8_2:53619806-53619825 Msa1255210:intron 35.0%
GTAACTAACTTTCCCAAAGA+AGG + chr8_2:53620305-53620324 None:intergenic 35.0%
CCATGAAGAAGATGAAGAAA+AGG + chr8_2:53620352-53620371 None:intergenic 35.0%
! CCTTTTCTTCATCTTCTTCA+TGG - chr8_2:53620349-53620368 Msa1255210:intron 35.0%
AACAGAGTAGAACAAAAGCA+AGG + chr8_2:53620451-53620470 None:intergenic 35.0%
!! ATCTTGCTTGTTTTCATCCA+TGG - chr8_2:53620540-53620559 Msa1255210:intron 35.0%
! TATTTTGTTCATCCAAGCGA+AGG - chr8_2:53620598-53620617 Msa1255210:intron 35.0%
ATGGATCCAATTATCTAGCT+TGG - chr8_2:53620653-53620672 Msa1255210:intron 35.0%
ACGTTTCCAAGCTAGATAAT+TGG + chr8_2:53620662-53620681 None:intergenic 35.0%
TTAGGAACGAAGAACAAACT+CGG - chr8_2:53620697-53620716 Msa1255210:intron 35.0%
AACAAACTCGGTTTCATCAA+TGG - chr8_2:53620709-53620728 Msa1255210:intron 35.0%
CGAAGTAAATCATCACTATC+AGG + chr8_2:53620748-53620767 None:intergenic 35.0%
!! GTAATCATTTGGTGCAATCT+TGG - chr8_2:53620785-53620804 Msa1255210:intron 35.0%
! GGTTTTCTATGATTCTGCTT+TGG - chr8_2:53620846-53620865 Msa1255210:intron 35.0%
ACACACACACAATTAGGTAT+GGG + chr8_2:53621030-53621049 None:intergenic 35.0%
AACACACACACAATTAGGTA+TGG + chr8_2:53621031-53621050 None:intergenic 35.0%
TAAATGCTACTGATGCTAGA+AGG - chr8_2:53621280-53621299 Msa1255210:intron 35.0%
! GGTTTGTTTGCATTATTGGA+AGG + chr8_2:53621330-53621349 None:intergenic 35.0%
! GTGACAAAAAGTGCAATATC+TGG + chr8_2:53621355-53621374 None:intergenic 35.0%
AATCAACAGTGTGATTGTTG+CGG + chr8_2:53621377-53621396 None:intergenic 35.0%
ACAGTGATATTATTGGAAGC+AGG + chr8_2:53621612-53621631 None:intergenic 35.0%
AGGAGACACAGTGATATTAT+TGG + chr8_2:53621619-53621638 None:intergenic 35.0%
AATGATCCATGAAATAGGAG+GGG + chr8_2:53621700-53621719 None:intergenic 35.0%
CAATGATCCATGAAATAGGA+GGG + chr8_2:53621701-53621720 None:intergenic 35.0%
TCAATGATCCATGAAATAGG+AGG + chr8_2:53621702-53621721 None:intergenic 35.0%
TTGGGTAAAGTAACTTTGAC+AGG + chr8_2:53621789-53621808 None:intergenic 35.0%
! GTCAAAGTTACTTTACCCAA+TGG - chr8_2:53621789-53621808 Msa1255210:intron 35.0%
!! ACAATAAGAGAGGTACCATT+GGG + chr8_2:53621807-53621826 None:intergenic 35.0%
!! AACAATAAGAGAGGTACCAT+TGG + chr8_2:53621808-53621827 None:intergenic 35.0%
ATAGTTTGGCAGCAGAAATA+AGG + chr8_2:53621908-53621927 None:intergenic 35.0%
! GTCTATGAAGATGATTGGTT+TGG - chr8_2:53621989-53622008 Msa1255210:intron 35.0%
! TCCAAATCTGAAATGCCATA+AGG + chr8_2:53622156-53622175 None:intergenic 35.0%
TCTTAAGTAAGATAACCCAG+AGG + chr8_2:53622421-53622440 None:intergenic 35.0%
CTTACTTAAGACTAAAGCTG+AGG - chr8_2:53622430-53622449 Msa1255210:intron 35.0%
!!! GTGAAACTGGTTTTGAATCA+AGG + chr8_2:53622483-53622502 None:intergenic 35.0%
AAATCAGGGAGTAAAAACTC+TGG + chr8_2:53622539-53622558 None:intergenic 35.0%
CATGAGATGCATAGAAATCA+GGG + chr8_2:53622553-53622572 None:intergenic 35.0%
TTGAAACTCCCCAACAAAAT+GGG - chr8_2:53622597-53622616 Msa1255210:intron 35.0%
! TTCAACTCTCCCATTTTGTT+GGG + chr8_2:53622609-53622628 None:intergenic 35.0%
! TTTCAACTCTCCCATTTTGT+TGG + chr8_2:53622610-53622629 None:intergenic 35.0%
TGCTAACATTGAGAATATGC+TGG + chr8_2:53622640-53622659 None:intergenic 35.0%
TGATTGTTAAGTAAGGGAGT+GGG + chr8_2:53622746-53622765 None:intergenic 35.0%
GGAGACTGATTGTTAAGTAA+GGG + chr8_2:53622752-53622771 None:intergenic 35.0%
AGGAGACTGATTGTTAAGTA+AGG + chr8_2:53622753-53622772 None:intergenic 35.0%
! ATTTTCTTGGGTTACAAGTC+TGG - chr8_2:53622893-53622912 Msa1255210:intron 35.0%
GGTTACAAGTCTGGTTATAA+GGG - chr8_2:53622902-53622921 Msa1255210:intron 35.0%
!! CTCTAGAATGAAGATCAAAG+AGG + chr8_2:53622934-53622953 None:intergenic 35.0%
! GAGAAGGACATTTTCATGAA+AGG + chr8_2:53622981-53623000 None:intergenic 35.0%
AAAATACTGGCAATCATGAG+TGG + chr8_2:53623026-53623045 None:intergenic 35.0%
AAATGTCATCAATGACAGGA+GGG + chr8_2:53623105-53623124 None:intergenic 35.0%
AAAATGTCATCAATGACAGG+AGG + chr8_2:53623106-53623125 None:intergenic 35.0%
GGTAAAATGTCATCAATGAC+AGG + chr8_2:53623109-53623128 None:intergenic 35.0%
CTAATTCTTGTGGATCTTCT+TGG + chr8_2:53623175-53623194 None:intergenic 35.0%
! TGGAGCATTTCTAATTCTTG+TGG + chr8_2:53623185-53623204 None:intergenic 35.0%
!!! TCAGCATATGTTTTTGGTTC+AGG + chr8_2:53623331-53623350 None:intergenic 35.0%
TGAACCAAAAACATATGCTG+AGG - chr8_2:53623330-53623349 Msa1255210:intron 35.0%
TCTTGAGAAAACTGGTACTT+GGG - chr8_2:53623402-53623421 Msa1255210:intron 35.0%
! CTTTAGCTTCCATTCATAAC+TGG - chr8_2:53623620-53623639 Msa1255210:intron 35.0%
TTGTAAATCACCATGCAGAA+AGG + chr8_2:53623674-53623693 None:intergenic 35.0%
CAAATCCACCAAATCTAATC+AGG - chr8_2:53623726-53623745 Msa1255210:intron 35.0%
! GTCTCTTTATGGTTTGAAAC+AGG - chr8_2:53623765-53623784 Msa1255210:intron 35.0%
! ATGGTTTGAAACAGGCTAAT+AGG - chr8_2:53623773-53623792 Msa1255210:intron 35.0%
TGAAACAGGCTAATAGGAAA+TGG - chr8_2:53623779-53623798 Msa1255210:intron 35.0%
TCAGTCATTTACTGTGTTAC+TGG - chr8_2:53623885-53623904 Msa1255210:intron 35.0%
GCCAACTCAAATATTTCCTT+GGG - chr8_2:53624004-53624023 Msa1255210:intron 35.0%
TCCCAAGGAAATATTTGAGT+TGG + chr8_2:53624008-53624027 None:intergenic 35.0%
CAGAGTCAGAAAGTAAATCA+AGG + chr8_2:53624083-53624102 None:intergenic 35.0%
CTTGATTTACTTTCTGACTC+TGG - chr8_2:53624081-53624100 Msa1255210:intron 35.0%
TCATTATGAAGTTCAATGGC+AGG + chr8_2:53624144-53624163 None:intergenic 35.0%
CCAATTAATCTCCTATAAGC+AGG + chr8_2:53624192-53624211 None:intergenic 35.0%
CCTGCTTATAGGAGATTAAT+TGG - chr8_2:53624189-53624208 Msa1255210:intron 35.0%
TGTGTGATGAAAGTGATATC+AGG + chr8_2:53624243-53624262 None:intergenic 35.0%
AGGACTATCAGATACTTGAT+GGG - chr8_2:53624318-53624337 Msa1255210:intron 35.0%
GAAAGAATAAACCTTTGCCA+GGG + chr8_2:53624347-53624366 None:intergenic 35.0%
TGTAAAGCCTTGAATGTGTA+TGG + chr8_2:53624382-53624401 None:intergenic 35.0%
! GATACCAGAAGATCCATTTT+TGG - chr8_2:53624426-53624445 Msa1255210:intron 35.0%
ATGACCAAAAATGGATCTTC+TGG + chr8_2:53624433-53624452 None:intergenic 35.0%
CTTTGTTCTCCATGAAATGA+GGG + chr8_2:53624475-53624494 None:intergenic 35.0%
TCTTTGTTCTCCATGAAATG+AGG + chr8_2:53624476-53624495 None:intergenic 35.0%
! AAACAGGATTAGCAGCAATA+TGG + chr8_2:53624653-53624672 None:intergenic 35.0%
! GAAGCTTTTCTCTGACTATA+TGG + chr8_2:53624710-53624729 None:intergenic 35.0%
TTCATTCTTTCTGTCCAAGA+TGG - chr8_2:53624815-53624834 Msa1255210:intron 35.0%
AAGATCTTTCAACTCCATCT+TGG + chr8_2:53624832-53624851 None:intergenic 35.0%
TATCAACTTCCATCTTGTTG+GGG - chr8_2:53624852-53624871 Msa1255210:intron 35.0%
! TACACAATATTGAAGGTGCA+TGG + chr8_2:53624981-53625000 None:intergenic 35.0%
! GACTTCATTCAACCACATTT+TGG - chr8_2:53625354-53625373 Msa1255210:intron 35.0%
! CATTAATCATGGCTTTACAG+AGG - chr8_2:53625443-53625462 Msa1255210:intron 35.0%
TACAGAGGATACATCTTCTA+TGG - chr8_2:53625458-53625477 Msa1255210:intron 35.0%
ACAGAGGATACATCTTCTAT+GGG - chr8_2:53625459-53625478 Msa1255210:intron 35.0%
TGTGTGTGGAGTATATAAAG+AGG + chr8_2:53625545-53625564 None:intergenic 35.0%
! GAGGTGTAAGGTTATCTTTT+GGG + chr8_2:53625741-53625760 None:intergenic 35.0%
!! CAGTTGGGTGATGTTTTTAT+TGG + chr8_2:53625777-53625796 None:intergenic 35.0%
!! TTTGTTGGTAGCAATCAGTT+GGG + chr8_2:53625792-53625811 None:intergenic 35.0%
!!! TTTTGTTGGTAGCAATCAGT+TGG + chr8_2:53625793-53625812 None:intergenic 35.0%
! GGGGGTTTGATGTTAATTTT+TGG + chr8_2:53625845-53625864 None:intergenic 35.0%
! TGAGGTTATGTCTCAACTTT+TGG + chr8_2:53625883-53625902 None:intergenic 35.0%
AGACATAACCTCAAACTTCA+TGG - chr8_2:53625890-53625909 Msa1255210:CDS 35.0%
ATAACCTCAAACTTCATGGA+TGG - chr8_2:53625894-53625913 Msa1255210:CDS 35.0%
!!! GGTGTATGTACTTGTTTTTG+TGG + chr8_2:53625920-53625939 None:intergenic 35.0%
!! GGTTTTGATGGTTTTTTGGA+GGG + chr8_2:53625968-53625987 None:intergenic 35.0%
!!! TGGTTTTGATGGTTTTTTGG+AGG + chr8_2:53625969-53625988 None:intergenic 35.0%
!!! GGTTGGTTTTGATGGTTTTT+TGG + chr8_2:53625972-53625991 None:intergenic 35.0%
GAGAAGAATATATCAAGTGG+GGG + chr8_2:53626026-53626045 None:intergenic 35.0%
AGACATCTATTGTAGACACA+TGG + chr8_2:53626175-53626194 None:intergenic 35.0%
GAAGTTTATTGCTTCCTTCT+TGG - chr8_2:53626198-53626217 Msa1255210:CDS 35.0%
! TTCAACTTCATAATTTGCCC+TGG - chr8_2:53626262-53626281 Msa1255210:CDS 35.0%
! TCATAATTTGCCCTGGTTAT+TGG - chr8_2:53626269-53626288 Msa1255210:CDS 35.0%
TAAGCTAAGACCAATAACCA+GGG + chr8_2:53626282-53626301 None:intergenic 35.0%
TTAAGCTAAGACCAATAACC+AGG + chr8_2:53626283-53626302 None:intergenic 35.0%
GCACAAAAACCATTGATGCA+TGG - chr8_2:53616672-53616691 Msa1255210:three_prime_UTR 40.0%
TTCATTAGCCCATGCATCAA+TGG + chr8_2:53616684-53616703 None:intergenic 40.0%
! GATGCATGGGCTAATGAAAA+TGG - chr8_2:53616686-53616705 Msa1255210:three_prime_UTR 40.0%
TGCAAAACCAAATAAACCCG+TGG - chr8_2:53616821-53616840 Msa1255210:three_prime_UTR 40.0%
AGAACAACCACGGGTTTATT+TGG + chr8_2:53616831-53616850 None:intergenic 40.0%
ACCATGTACTAGAACAACCA+CGG + chr8_2:53616841-53616860 None:intergenic 40.0%
CCATGTTACTATTCCTTCAG+AGG + chr8_2:53616868-53616887 None:intergenic 40.0%
! CCTCTGAAGGAATAGTAACA+TGG - chr8_2:53616865-53616884 Msa1255210:CDS 40.0%
! GTAACATGGCAGTTTCAAGT+TGG - chr8_2:53616879-53616898 Msa1255210:CDS 40.0%
AAACACTCTGCTTGAAACCT+AGG + chr8_2:53616987-53617006 None:intergenic 40.0%
! TAGGTTTCAAGCAGAGTGTT+TGG - chr8_2:53616986-53617005 Msa1255210:intron 40.0%
AGTGTTTGGCCATTGCTTTA+AGG - chr8_2:53617000-53617019 Msa1255210:intron 40.0%
!! GCCATTGCTTTAAGGAAACT+TGG - chr8_2:53617008-53617027 Msa1255210:intron 40.0%
!!! GTTGTTGGTTTTAGCTATGG+TGG - chr8_2:53617047-53617066 Msa1255210:intron 40.0%
!!! TGGTTTTAGCTATGGTGGAA+TGG - chr8_2:53617052-53617071 Msa1255210:intron 40.0%
! TCCTGAATTGGTTCAAGCTT+TGG - chr8_2:53617100-53617119 Msa1255210:intron 40.0%
ACCAAAGCTTGAACCAATTC+AGG + chr8_2:53617104-53617123 None:intergenic 40.0%
! GGTTATATCCGGATCCATTT+TGG - chr8_2:53617121-53617140 Msa1255210:intron 40.0%
AGTCATAGCCAAAATGGATC+CGG + chr8_2:53617132-53617151 None:intergenic 40.0%
GTGAGTTCATTGCAAGAACT+TGG - chr8_2:53617164-53617183 Msa1255210:intron 40.0%
AGTCTTTGTGTAAACGATCC+GGG + chr8_2:53617280-53617299 None:intergenic 40.0%
TTATCCTTCTATGCAGTGCT+TGG + chr8_2:53617782-53617801 None:intergenic 40.0%
ATATCCCCATCCCTCAAAAT+AGG - chr8_2:53617838-53617857 Msa1255210:intron 40.0%
!! TGAACCTATTTTGAGGGATG+GGG + chr8_2:53617845-53617864 None:intergenic 40.0%
ATGAGCACAAATGTTGCACT+GGG - chr8_2:53617883-53617902 Msa1255210:intron 40.0%
!! AATAGATTGGAGGCATTTGG+CGG + chr8_2:53617928-53617947 None:intergenic 40.0%
!! AGAGGTGTTGAATAGATTGG+AGG + chr8_2:53617938-53617957 None:intergenic 40.0%
ATTGATAGGGAGCTTAAGAG+AGG + chr8_2:53617956-53617975 None:intergenic 40.0%
ACTTTCGTGTTTCGTAGGTA+TGG - chr8_2:53618496-53618515 Msa1255210:intron 40.0%
AATGTCTCACACACCCATAT+AGG - chr8_2:53618784-53618803 Msa1255210:intron 40.0%
CCCATATAGGAAGATATGTG+AGG - chr8_2:53618797-53618816 Msa1255210:intron 40.0%
! GGAGTATCATATACCTCTGT+TGG + chr8_2:53618827-53618846 None:intergenic 40.0%
AACGTAAACTATACTCCCTC+CGG + chr8_2:53618983-53619002 None:intergenic 40.0%
CAACATTCCAAATTTCACCC+AGG - chr8_2:53619868-53619887 Msa1255210:intron 40.0%
!! TGAGCTTTTTCTCCCTTCTT+TGG - chr8_2:53620289-53620308 Msa1255210:intron 40.0%
!! GAGCTTTTTCTCCCTTCTTT+GGG - chr8_2:53620290-53620309 Msa1255210:intron 40.0%
! AGAAAAGGTGCAACGAAAAG+TGG + chr8_2:53620337-53620356 None:intergenic 40.0%
! TCTAGCTTGGAAACGTTCTA+TGG - chr8_2:53620666-53620685 Msa1255210:intron 40.0%
AAATCATCACTATCAGGTGC+AGG + chr8_2:53620742-53620761 None:intergenic 40.0%
ATGATTTACTTCGTCCTGCA+TGG - chr8_2:53620755-53620774 Msa1255210:intron 40.0%
TGATTTACTTCGTCCTGCAT+GGG - chr8_2:53620756-53620775 Msa1255210:intron 40.0%
TGATTACAATGTTCCCATGC+AGG + chr8_2:53620772-53620791 None:intergenic 40.0%
TGACTCTATTGCTCAAACTG+TGG - chr8_2:53620825-53620844 Msa1255210:intron 40.0%
ACACACAATTAGGTATGGGA+CGG + chr8_2:53621026-53621045 None:intergenic 40.0%
GGATGAACACACACACAATT+AGG + chr8_2:53621036-53621055 None:intergenic 40.0%
CAAATCATGCAATTCCTCAC+TGG - chr8_2:53621105-53621124 Msa1255210:intron 40.0%
TCTTCACTAACACTGAGAGA+GGG + chr8_2:53621246-53621265 None:intergenic 40.0%
ATCTTCACTAACACTGAGAG+AGG + chr8_2:53621247-53621266 None:intergenic 40.0%
! GGCAGGTTTGTTTGCATTAT+TGG + chr8_2:53621334-53621353 None:intergenic 40.0%
! CAAAAAGTGCAATATCTGGC+AGG + chr8_2:53621351-53621370 None:intergenic 40.0%
ATTCAAACTTGCACTAGTGG+TGG + chr8_2:53621484-53621503 None:intergenic 40.0%
TGCATTCAAACTTGCACTAG+TGG + chr8_2:53621487-53621506 None:intergenic 40.0%
GCATCTACAAGTTCCAATTC+TGG - chr8_2:53621504-53621523 Msa1255210:intron 40.0%
! TTCCAATTCTGGTCTTTCTC+AGG - chr8_2:53621515-53621534 Msa1255210:intron 40.0%
TTCCTGAGAAAGACCAGAAT+TGG + chr8_2:53621520-53621539 None:intergenic 40.0%
!! CAAGCTTGCTTGTTGTAACA+AGG + chr8_2:53621562-53621581 None:intergenic 40.0%
CTTGTTACAACAAGCAAGCT+TGG - chr8_2:53621560-53621579 Msa1255210:intron 40.0%
GAAATAGGAGGGGAATCAAA+AGG + chr8_2:53621690-53621709 None:intergenic 40.0%
TTGATTCCCCTCCTATTTCA+TGG - chr8_2:53621691-53621710 Msa1255210:intron 40.0%
GGTTTGGCTAAACAAGTGAA+TGG - chr8_2:53622005-53622024 Msa1255210:intron 40.0%
CTAGAAACAGAAACTGAAGC+AGG + chr8_2:53622056-53622075 None:intergenic 40.0%
TTGTACCTTCTGATGCCTTA+TGG - chr8_2:53622138-53622157 Msa1255210:intron 40.0%
! AAATGCCATAAGGCATCAGA+AGG + chr8_2:53622146-53622165 None:intergenic 40.0%
GCCTTATGGCATTTCAGATT+TGG - chr8_2:53622152-53622171 Msa1255210:intron 40.0%
ATGATCATAGCAGATTCCTC+TGG - chr8_2:53622402-53622421 Msa1255210:intron 40.0%
TGATCATAGCAGATTCCTCT+GGG - chr8_2:53622403-53622422 Msa1255210:intron 40.0%
CCATGAGATGCATAGAAATC+AGG + chr8_2:53622554-53622573 None:intergenic 40.0%
CCTGATTTCTATGCATCTCA+TGG - chr8_2:53622551-53622570 Msa1255210:intron 40.0%
GAGTTTCAACACAAGATCTC+TGG + chr8_2:53622586-53622605 None:intergenic 40.0%
GTTGAAACTCCCCAACAAAA+TGG - chr8_2:53622596-53622615 Msa1255210:intron 40.0%
! TCAACTCTCCCATTTTGTTG+GGG + chr8_2:53622608-53622627 None:intergenic 40.0%
! TCTAAGTTACCACCCTCTTT+TGG - chr8_2:53622677-53622696 Msa1255210:intron 40.0%
! CTAAGTTACCACCCTCTTTT+GGG - chr8_2:53622678-53622697 Msa1255210:intron 40.0%
ATGGCATATGACCCAAAAGA+GGG + chr8_2:53622692-53622711 None:intergenic 40.0%
AATGGCATATGACCCAAAAG+AGG + chr8_2:53622693-53622712 None:intergenic 40.0%
GATTGTTAAGTAAGGGAGTG+GGG + chr8_2:53622745-53622764 None:intergenic 40.0%
CTGATTGTTAAGTAAGGGAG+TGG + chr8_2:53622747-53622766 None:intergenic 40.0%
!! TTGGTTGAAGTTTGGTTCTG+TGG + chr8_2:53622859-53622878 None:intergenic 40.0%
!! TCTAGCTCTTGGTTGAAGTT+TGG + chr8_2:53622867-53622886 None:intergenic 40.0%
GGGTTACAAGTCTGGTTATA+AGG - chr8_2:53622901-53622920 Msa1255210:intron 40.0%
TTCATGAAAGGTGACATGTC+TGG + chr8_2:53622969-53622988 None:intergenic 40.0%
!! AGGAATTTTGAGGGTAGAGA+AGG + chr8_2:53622997-53623016 None:intergenic 40.0%
AATGTCATCAATGACAGGAG+GGG + chr8_2:53623104-53623123 None:intergenic 40.0%
!! AGGAGTATCATCATGCACAT+GGG + chr8_2:53623146-53623165 None:intergenic 40.0%
!! AAGGAGTATCATCATGCACA+TGG + chr8_2:53623147-53623166 None:intergenic 40.0%
! CTTGCCTCAGCATATGTTTT+TGG + chr8_2:53623337-53623356 None:intergenic 40.0%
! AGCTATGCAAGTTGAGTTGT+TGG - chr8_2:53623378-53623397 Msa1255210:intron 40.0%
!! TTGTTGGCTCTTGAGAAAAC+TGG - chr8_2:53623394-53623413 Msa1255210:intron 40.0%
CTCTTGAGAAAACTGGTACT+TGG - chr8_2:53623401-53623420 Msa1255210:intron 40.0%
AACTGGTACTTGGGATATTG+TGG - chr8_2:53623411-53623430 Msa1255210:intron 40.0%
ATGCTGATGGTTCAGTTGAA+AGG - chr8_2:53623491-53623510 Msa1255210:intron 40.0%
! TGGTTCAGTTGAAAGGTACA+AGG - chr8_2:53623498-53623517 Msa1255210:intron 40.0%
GTAACCTTTAGCAACCAATC+TGG + chr8_2:53623524-53623543 None:intergenic 40.0%
ACTGTAGTCATCTTAGCAAC+AGG + chr8_2:53623586-53623605 None:intergenic 40.0%
GTTAACAATGCCTTTCTGCA+TGG - chr8_2:53623661-53623680 Msa1255210:intron 40.0%
GTTTATATGCTTCTACCTCC+AGG - chr8_2:53623700-53623719 Msa1255210:intron 40.0%
CTTGCACACCTGATTAGATT+TGG + chr8_2:53623737-53623756 None:intergenic 40.0%
!! GTTGATGATATCATCCTCAC+TGG - chr8_2:53623913-53623932 Msa1255210:intron 40.0%
GGCCAACTCAAATATTTCCT+TGG - chr8_2:53624003-53624022 Msa1255210:intron 40.0%
AATGAGCAACTTCAATCCCA+AGG + chr8_2:53624023-53624042 None:intergenic 40.0%
GATGAAAGTGATATCAGGTC+TGG + chr8_2:53624238-53624257 None:intergenic 40.0%
CAGTAGGCTTGGACAAAAAT+TGG + chr8_2:53624275-53624294 None:intergenic 40.0%
GCATTATGATGAGTGACAGT+AGG + chr8_2:53624291-53624310 None:intergenic 40.0%
CTCATCATAATGCAGCTTTG+AGG - chr8_2:53624298-53624317 Msa1255210:intron 40.0%
GAGGACTATCAGATACTTGA+TGG - chr8_2:53624317-53624336 Msa1255210:intron 40.0%
GGAAAGAATAAACCTTTGCC+AGG + chr8_2:53624348-53624367 None:intergenic 40.0%
AAGGCTTTACAGATGCTGAT+TGG - chr8_2:53624391-53624410 Msa1255210:intron 40.0%
! AGGCTTTACAGATGCTGATT+GGG - chr8_2:53624392-53624411 Msa1255210:intron 40.0%
AGAAGAGGATCTAGAAACAG+TGG + chr8_2:53624505-53624524 None:intergenic 40.0%
TCTATACTCAGCTTCAGAAG+AGG + chr8_2:53624520-53624539 None:intergenic 40.0%
GAAGATCATGAAGCACATAG+AGG + chr8_2:53624578-53624597 None:intergenic 40.0%
! CTAATCCTGTTTTCCATGAG+AGG - chr8_2:53624661-53624680 Msa1255210:intron 40.0%
GTCAGAGAAAAGCTTCACAA+TGG - chr8_2:53624714-53624733 Msa1255210:intron 40.0%
ATTGTTACCAGTTGCTTCTC+AGG - chr8_2:53624746-53624765 Msa1255210:intron 40.0%
ATGCTTGGGAAGAATTGACT+TGG + chr8_2:53624793-53624812 None:intergenic 40.0%
ATCAACTTCCATCTTGTTGG+GGG - chr8_2:53624853-53624872 Msa1255210:intron 40.0%
GTCAAAACTCAAAAGGACGT+GGG + chr8_2:53625135-53625154 None:intergenic 40.0%
CAGAGGATACATCTTCTATG+GGG - chr8_2:53625460-53625479 Msa1255210:intron 40.0%
! TGTTCGTTTTATGCAGAGAC+TGG + chr8_2:53625664-53625683 None:intergenic 40.0%
! CGAGGTGTAAGGTTATCTTT+TGG + chr8_2:53625742-53625761 None:intergenic 40.0%
! TATTGGTGTTTAGATGTGCG+AGG + chr8_2:53625760-53625779 None:intergenic 40.0%
!!! ATTTTTGGTGTTGACGTTGG+TGG + chr8_2:53625830-53625849 None:intergenic 40.0%
! TTTGGTTTCTGCAGTTGTGT+GGG + chr8_2:53625865-53625884 None:intergenic 40.0%
!!! TTTTGGTTTCTGCAGTTGTG+TGG + chr8_2:53625866-53625885 None:intergenic 40.0%
!!! ATGGTTTTTTGGAGGGCTTT+TGG + chr8_2:53625961-53625980 None:intergenic 40.0%
AGAAGGTGAGATGTTGTGTA+GGG + chr8_2:53626000-53626019 None:intergenic 40.0%
GTATCAAATGACAGGCAACT+AGG - chr8_2:53626091-53626110 Msa1255210:CDS 40.0%
! CATGGGCTAATGAAAATGGC+AGG - chr8_2:53616690-53616709 Msa1255210:three_prime_UTR 45.0%
!! GGCTTTGTTATGGTCTCTGA+AGG + chr8_2:53616771-53616790 None:intergenic 45.0%
CCATGTACTAGAACAACCAC+GGG + chr8_2:53616840-53616859 None:intergenic 45.0%
!! GTACATGGTTTTGCCTCTGA+AGG - chr8_2:53616852-53616871 Msa1255210:exon 45.0%
CCTCCGAAGAATAGAAGATC+TGG + chr8_2:53616936-53616955 None:intergenic 45.0%
CCAGATCTTCTATTCTTCGG+AGG - chr8_2:53616933-53616952 Msa1255210:CDS 45.0%
GGCTGAGATGTATCCTGAAT+TGG - chr8_2:53617088-53617107 Msa1255210:intron 45.0%
CTTCTATGCAGTGCTTGGTT+GGG + chr8_2:53617777-53617796 None:intergenic 45.0%
CATGAGCACAAATGTTGCAC+TGG - chr8_2:53617882-53617901 Msa1255210:intron 45.0%
TGAGCACAAATGTTGCACTG+GGG - chr8_2:53617884-53617903 Msa1255210:intron 45.0%
TATGTGAGGTTGACCAACAG+AGG - chr8_2:53618811-53618830 Msa1255210:intron 45.0%
GAGGTATATGATACTCCCTC+TGG - chr8_2:53618830-53618849 Msa1255210:intron 45.0%
!! TTTGAGTTGGTGAATGGTGG+TGG - chr8_2:53619444-53619463 Msa1255210:intron 45.0%
GAACGAGGTGAGCTATTAGA+TGG - chr8_2:53619821-53619840 Msa1255210:intron 45.0%
GGTGCAACGAAAAGTGGTTA+TGG + chr8_2:53620331-53620350 None:intergenic 45.0%
GCAGTTTCACCGAAACTCAA+TGG - chr8_2:53620634-53620653 Msa1255210:intron 45.0%
CGTTCTATGGAACGTGCATT+AGG - chr8_2:53620679-53620698 Msa1255210:intron 45.0%
ATCACTATCAGGTGCAGGAA+TGG + chr8_2:53620737-53620756 None:intergenic 45.0%
TTTGCATGAGCGTTTCAGCA+AGG - chr8_2:53620882-53620901 Msa1255210:intron 45.0%
! AGCGTTTCAGCAAGGTTGAT+AGG - chr8_2:53620890-53620909 Msa1255210:intron 45.0%
! GCTGCTGCTTGTAAGAGTTA+GGG + chr8_2:53621422-53621441 None:intergenic 45.0%
TATTGGAAGCAGGACCTGTA+GGG + chr8_2:53621602-53621621 None:intergenic 45.0%
TTATTGGAAGCAGGACCTGT+AGG + chr8_2:53621603-53621622 None:intergenic 45.0%
!! ATACCTAAAGAGGTGTCCTG+AGG + chr8_2:53621666-53621685 None:intergenic 45.0%
CAGGAGGGTAGTAATGATAG+AGG + chr8_2:53622031-53622050 None:intergenic 45.0%
! TGGTGGAGGAGGAATTTTGA+GGG + chr8_2:53623006-53623025 None:intergenic 45.0%
ATACTGGCAATCATGAGTGG+TGG + chr8_2:53623023-53623042 None:intergenic 45.0%
GAGGGGATATAGGGTTTGAT+TGG + chr8_2:53623087-53623106 None:intergenic 45.0%
CAATGACAGGAGGGGATATA+GGG + chr8_2:53623096-53623115 None:intergenic 45.0%
TCAATGACAGGAGGGGATAT+AGG + chr8_2:53623097-53623116 None:intergenic 45.0%
ACATGGGAAGATGATACAGG+TGG + chr8_2:53623130-53623149 None:intergenic 45.0%
TGCACATGGGAAGATGATAC+AGG + chr8_2:53623133-53623152 None:intergenic 45.0%
GTGGATCTTCTTGGAGAAGA+AGG + chr8_2:53623166-53623185 None:intergenic 45.0%
AGGCAAGCAAGCATGATTGT+TGG - chr8_2:53623350-53623369 Msa1255210:intron 45.0%
CCTATAGGTTTGACATGAGG+TGG + chr8_2:53623442-53623461 None:intergenic 45.0%
CCACCTCATGTCAAACCTAT+AGG - chr8_2:53623439-53623458 Msa1255210:intron 45.0%
CAGCCTATAGGTTTGACATG+AGG + chr8_2:53623445-53623464 None:intergenic 45.0%
ATGTCAAACCTATAGGCTGC+AGG - chr8_2:53623446-53623465 Msa1255210:intron 45.0%
TAAATCCACCTGCAGCCTAT+AGG + chr8_2:53623457-53623476 None:intergenic 45.0%
! TGAAAGGTACAAGGCCAGAT+TGG - chr8_2:53623507-53623526 Msa1255210:intron 45.0%
! AAGGCCAGATTGGTTGCTAA+AGG - chr8_2:53623517-53623536 Msa1255210:intron 45.0%
!! GATTTGGTGGATTTGATGCC+TGG + chr8_2:53623721-53623740 None:intergenic 45.0%
GCACACCTGATTAGATTTGG+TGG + chr8_2:53623734-53623753 None:intergenic 45.0%
CAGAAAGAGAATCACCAGTG+AGG + chr8_2:53623930-53623949 None:intergenic 45.0%
GAAGTTGCTCATTCCAAGTC+AGG - chr8_2:53624030-53624049 Msa1255210:intron 45.0%
! CTTTCTGACTCTGGCTTCAT+TGG - chr8_2:53624090-53624109 Msa1255210:intron 45.0%
AGTTCAATGGCAGGATCAGA+TGG + chr8_2:53624135-53624154 None:intergenic 45.0%
TAAGCAGGGACATCTGCATA+TGG + chr8_2:53624177-53624196 None:intergenic 45.0%
ATGCAGATGTCCCTGCTTAT+AGG - chr8_2:53624178-53624197 Msa1255210:intron 45.0%
ATGATGAGTGACAGTAGGCT+TGG + chr8_2:53624286-53624305 None:intergenic 45.0%
! TTTACAGATGCTGATTGGGC+AGG - chr8_2:53624396-53624415 Msa1255210:intron 45.0%
TTGGTCCTCTCATGGAAAAC+AGG + chr8_2:53624669-53624688 None:intergenic 45.0%
GCAGTCAATCTCAAGATGCT+TGG + chr8_2:53624688-53624707 None:intergenic 45.0%
AGTTGATCCTGAGAAGCAAC+TGG + chr8_2:53624756-53624775 None:intergenic 45.0%
TCAACTTCCATCTTGTTGGG+GGG - chr8_2:53624854-53624873 Msa1255210:intron 45.0%
GGTCAAAACTCAAAAGGACG+TGG + chr8_2:53625136-53625155 None:intergenic 45.0%
GTTTAGATGTGCGAGGTGTA+AGG + chr8_2:53625753-53625772 None:intergenic 45.0%
TTGGTTTCTGCAGTTGTGTG+GGG + chr8_2:53625864-53625883 None:intergenic 45.0%
!!! GGGCTTTTGGTTGGTTTTGA+TGG + chr8_2:53625980-53625999 None:intergenic 45.0%
! TGTTGTGTAGGGCTTTTGGT+TGG + chr8_2:53625989-53626008 None:intergenic 45.0%
! GAGATGTTGTGTAGGGCTTT+TGG + chr8_2:53625993-53626012 None:intergenic 45.0%
GAGAAGGTGAGATGTTGTGT+AGG + chr8_2:53626001-53626020 None:intergenic 45.0%
ATATCAAGTGGGGGAAGAGA+AGG + chr8_2:53626017-53626036 None:intergenic 45.0%
AAATGACAGGCAACTAGGAG+AGG - chr8_2:53626096-53626115 Msa1255210:CDS 45.0%
AATGACAGGCAACTAGGAGA+GGG - chr8_2:53626097-53626116 Msa1255210:CDS 45.0%
TGCTTCATTTGACGCCAAGA+AGG + chr8_2:53626215-53626234 None:intergenic 45.0%
!!! ATATAAAATTTTAAAATTGT+AGG - chr8_2:53617592-53617611 Msa1255210:CDS 5.0%
!! AAAAAAATATAACATTATTT+CGG + chr8_2:53617722-53617741 None:intergenic 5.0%
!!! TTAAAATATATTTTTTGTAA+TGG - chr8_2:53619585-53619604 Msa1255210:intron 5.0%
!!! TAAAATATATTTTTTGTAAT+GGG - chr8_2:53619586-53619605 Msa1255210:intron 5.0%
CCCGTGGTTGTTCTAGTACA+TGG - chr8_2:53616837-53616856 Msa1255210:three_prime_UTR 50.0%
CCTTCTATGCAGTGCTTGGT+TGG + chr8_2:53617778-53617797 None:intergenic 50.0%
! CCAACCAAGCACTGCATAGA+AGG - chr8_2:53617775-53617794 Msa1255210:intron 50.0%
! TTGTTTTCATCCATGGCGCG+CGG - chr8_2:53620547-53620566 Msa1255210:intron 50.0%
AGAGAGTTTGGACCTTCGCT+TGG + chr8_2:53620613-53620632 None:intergenic 50.0%
GGTGAAACTGCGAGAGAGTT+TGG + chr8_2:53620625-53620644 None:intergenic 50.0%
! TTGGTGGCTTCACAACGACA+GGG + chr8_2:53621057-53621076 None:intergenic 50.0%
! TTTGGTGGCTTCACAACGAC+AGG + chr8_2:53621058-53621077 None:intergenic 50.0%
AGGTATCCACCTCGTGGTAA+AGG - chr8_2:53621300-53621319 Msa1255210:intron 50.0%
! GGCTGCTGCTTGTAAGAGTT+AGG + chr8_2:53621423-53621442 None:intergenic 50.0%
AGCAGCCTCGTTCAAACTCT+GGG - chr8_2:53621436-53621455 Msa1255210:intron 50.0%
ATTGGAAGCAGGACCTGTAG+GGG + chr8_2:53621601-53621620 None:intergenic 50.0%
GTGATGCTTGAGGACACAAG+AGG + chr8_2:53621639-53621658 None:intergenic 50.0%
AAACTGAAGCAGGAGCAGGA+GGG + chr8_2:53622046-53622065 None:intergenic 50.0%
ACAGAAACTGAAGCAGGAGC+AGG + chr8_2:53622050-53622069 None:intergenic 50.0%
GCATATGACCCAAAAGAGGG+TGG + chr8_2:53622689-53622708 None:intergenic 50.0%
!! GTGGTGGAGGAGGAATTTTG+AGG + chr8_2:53623007-53623026 None:intergenic 50.0%
TCAAACCTATAGGCTGCAGG+TGG - chr8_2:53623449-53623468 Msa1255210:intron 50.0%
! AGGCTGCAGGTGGATTTACA+AGG - chr8_2:53623459-53623478 Msa1255210:intron 50.0%
!! TTGGTGGATTTGATGCCTGG+AGG + chr8_2:53623718-53623737 None:intergenic 50.0%
GCAAAGAGAGATGCCTGACT+TGG + chr8_2:53624046-53624065 None:intergenic 50.0%
! AGATGGTGTGGAGACTGGTT+TGG + chr8_2:53624118-53624137 None:intergenic 50.0%
AATGGCAGGATCAGATGGTG+TGG + chr8_2:53624130-53624149 None:intergenic 50.0%
!! AGATACTTGATGGGTTGCCC+TGG - chr8_2:53624327-53624346 Msa1255210:intron 50.0%
! TGCTGATTGGGCAGGTTGTT+TGG - chr8_2:53624404-53624423 Msa1255210:intron 50.0%
TGGGAGACTCCCTCATTTCA+TGG - chr8_2:53624463-53624482 Msa1255210:intron 50.0%
GATCCACTGAAGCTCACAAG+TGG + chr8_2:53624556-53624575 None:intergenic 50.0%
CAAGATGCTTGGTCCTCTCA+TGG + chr8_2:53624677-53624696 None:intergenic 50.0%
GGGGCTATCACAGACTGATA+AGG - chr8_2:53624873-53624892 Msa1255210:intron 50.0%
TGGTTTCTGCAGTTGTGTGG+GGG + chr8_2:53625863-53625882 None:intergenic 50.0%
GTGGCCATCCATGAAGTTTG+AGG + chr8_2:53625901-53625920 None:intergenic 50.0%
AGCTGGTCACCTTGTTCACT+TGG - chr8_2:53626144-53626163 Msa1255210:CDS 50.0%
ATGGTCGCTCCAAGTGAACA+AGG + chr8_2:53626156-53626175 None:intergenic 50.0%
GCACAAATGTTGCACTGGGG+TGG - chr8_2:53617887-53617906 Msa1255210:intron 55.0%
TTGTATTACACCGCGCGCCA+TGG + chr8_2:53620560-53620579 None:intergenic 55.0%
!! GCTAGAAGGTATCCACCTCG+TGG - chr8_2:53621294-53621313 Msa1255210:intron 55.0%
! GAAGGTGCACCTTTACCACG+AGG + chr8_2:53621312-53621331 None:intergenic 55.0%
CAGCAGCCTCGTTCAAACTC+TGG - chr8_2:53621435-53621454 Msa1255210:intron 55.0%
GCAGCCTCGTTCAAACTCTG+GGG - chr8_2:53621437-53621456 Msa1255210:intron 55.0%
TGCACCCCAGAGTTTGAACG+AGG + chr8_2:53621444-53621463 None:intergenic 55.0%
!! TCGTTCAAACTCTGGGGTGC+AGG - chr8_2:53621443-53621462 Msa1255210:intron 55.0%
!! CGTTCAAACTCTGGGGTGCA+GGG - chr8_2:53621444-53621463 Msa1255210:intron 55.0%
ACCTGTAGGGGTAGAGGCAA+GGG + chr8_2:53621589-53621608 None:intergenic 55.0%
CTGAGGAGCAGTGATGCTTG+AGG + chr8_2:53621649-53621668 None:intergenic 55.0%
CTCAAGCATCACTGCTCCTC+AGG - chr8_2:53621647-53621666 Msa1255210:intron 55.0%
GCTCCTCAGGACACCTCTTT+AGG - chr8_2:53621660-53621679 Msa1255210:intron 55.0%
GAAACTGAAGCAGGAGCAGG+AGG + chr8_2:53622047-53622066 None:intergenic 55.0%
GGTTCTGTGGCTGTGCAAAG+TGG + chr8_2:53622846-53622865 None:intergenic 55.0%
! GCAATCATGAGTGGTGGAGG+AGG + chr8_2:53623017-53623036 None:intergenic 55.0%
CTGGCAATCATGAGTGGTGG+AGG + chr8_2:53623020-53623039 None:intergenic 55.0%
GGATCAGATGGTGTGGAGAC+TGG + chr8_2:53624123-53624142 None:intergenic 55.0%
!! TTGATGGGTTGCCCTGGCAA+AGG - chr8_2:53624333-53624352 Msa1255210:intron 55.0%
CAGCCACTTGTGAGCTTCAG+TGG - chr8_2:53624550-53624569 Msa1255210:intron 55.0%
GTGATAGCCCCCCAACAAGA+TGG + chr8_2:53624864-53624883 None:intergenic 55.0%
!! TGGTGCGAGTAGCGGATGAT+TGG + chr8_2:53625941-53625960 None:intergenic 55.0%
!! AGGGCTTTTGGTGCGAGTAG+CGG + chr8_2:53625949-53625968 None:intergenic 55.0%
! GGAGAGGGCACAACGTTTGA+AGG - chr8_2:53626112-53626131 Msa1255210:CDS 55.0%
GGTGCACCTTTACCACGAGG+TGG + chr8_2:53621309-53621328 None:intergenic 60.0%
GACCTGTAGGGGTAGAGGCA+AGG + chr8_2:53621590-53621609 None:intergenic 60.0%
AGCAGGACCTGTAGGGGTAG+AGG + chr8_2:53621595-53621614 None:intergenic 60.0%
GCCCTTGCCTCTACCCCTAC+AGG - chr8_2:53621585-53621604 Msa1255210:intron 65.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 53616628 53626475 53616628 ID=Msa1255210;Name=Msa1255210
chr8_2 mRNA 53616628 53626475 53616628 ID=Msa1255210-mRNA-1;Parent=Msa1255210;Name=Msa1255210-mRNA-1;_AED=0.01;_eAED=0.01;_QI=26|1|1|1|1|1|4|235|315
chr8_2 exon 53616628 53616998 53616628 ID=Msa1255210-mRNA-1:exon:16626;Parent=Msa1255210-mRNA-1
chr8_2 exon 53617573 53617640 53617573 ID=Msa1255210-mRNA-1:exon:16625;Parent=Msa1255210-mRNA-1
chr8_2 exon 53623214 53623303 53623214 ID=Msa1255210-mRNA-1:exon:16624;Parent=Msa1255210-mRNA-1
chr8_2 exon 53625796 53626475 53625796 ID=Msa1255210-mRNA-1:exon:16623;Parent=Msa1255210-mRNA-1
chr8_2 five_prime_UTR 53626450 53626475 53626450 ID=Msa1255210-mRNA-1:five_prime_utr;Parent=Msa1255210-mRNA-1
chr8_2 CDS 53625796 53626449 53625796 ID=Msa1255210-mRNA-1:cds;Parent=Msa1255210-mRNA-1
chr8_2 CDS 53623214 53623303 53623214 ID=Msa1255210-mRNA-1:cds;Parent=Msa1255210-mRNA-1
chr8_2 CDS 53617573 53617640 53617573 ID=Msa1255210-mRNA-1:cds;Parent=Msa1255210-mRNA-1
chr8_2 CDS 53616863 53616998 53616863 ID=Msa1255210-mRNA-1:cds;Parent=Msa1255210-mRNA-1
chr8_2 three_prime_UTR 53616628 53616862 53616628 ID=Msa1255210-mRNA-1:three_prime_utr;Parent=Msa1255210-mRNA-1
Gene Sequence

>Msa1255210

ATGGTGAATCTTGTGGCAGCACAAAAACCATTGATGCATGGGCTAATGAAAATGGCAGGTATACGTCCCTACACAGTAGAGATAGAATCAGGAACAACAATGAATTTTTGGGTACCTTCAGAGACCATAACAAAGCCAAAGAAAAAAGAAGAAAAACCCAAAATCACTGCAAAACCAAATAAACCCGTGGTTGTTCTAGTACATGGTTTTGCCTCTGAAGGAATAGTAACATGGCAGTTTCAAGTTGGTGCATTAACAAAAAAGTACGCTGTTTATGTTCCAGATCTTCTATTCTTCGGAGGTTCAACCACAGACAAAACAGAAAGATCACCTAGGTTTCAAGCAGAGTGTTTGGCCATTGCTTTAAGGAAACTTGGTGTTGAAAAATGTATTGTTGTTGGTTTTAGCTATGGTGGAATGGTTGCTTTTAAAATGGCTGAGATGTATCCTGAATTGGTTCAAGCTTTGGTTATATCCGGATCCATTTTGGCTATGACTGATTCTATTAGTGTGAGTTCATTGCAAGAACTTGGTTTTTCTTCTTCTTCTGAGCTTTTGTTACCTAATTCTGTTAAAGGACTTAAAGCACTTTTGTCTGTTGCTGCTCACAAAAAACTTTGGTTCCCGGATCGTTTACACAAAGACTTTCTTGAGGTGATGTTCACAAATAGGAAAGAACGAGGTGAGCTATTAGATGGTTTAGTAATTAGCAATAAAGACGTCAACATTCCAAATTTCACCCAGAGGATACATCTTCTATGGGGTGAAAATGATCAAATTTTCAAATTGGAACTTGCTCAAAATATGAAAGAGCAACTAGGAGAGGGCACAACGTTTGAAGGTATAAAGAAAGCTGGTCACCTTGTTCACTTGGAGCGACCATGTGTCTACAATAGATGTCTCAAGAAGTTTATTGCTTCCTTCTTGGCGTCAAATGAAGCAAAATAA

Protein sequence

>Msa1255210

MVNLVAAQKPLMHGLMKMAGIRPYTVEIESGTTMNFWVPSETITKPKKKEEKPKITAKPNKPVVVLVHGFASEGIVTWQFQVGALTKKYAVYVPDLLFFGGSTTDKTERSPRFQAECLAIALRKLGVEKCIVVGFSYGGMVAFKMAEMYPELVQALVISGSILAMTDSISVSSLQELGFSSSSELLLPNSVKGLKALLSVAAHKKLWFPDRLHKDFLEVMFTNRKERGELLDGLVISNKDVNIPNFTQRIHLLWGENDQIFKLELAQNMKEQLGEGTTFEGIKKAGHLVHLERPCVYNRCLKKFIASFLASNEAK*