Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0121300 | XP_013468119.1 | 96.853 | 286 | 8 | 1 | 1 | 285 | 1 | 286 | 0.0 | 584 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0121300 | sp|Q8L817|ATCA7_ARATH | 52.459 | 244 | 111 | 3 | 31 | 273 | 33 | 272 | 3.21e-88 | 267 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0121300 | A0A072VKK0 | 96.853 | 286 | 8 | 1 | 1 | 285 | 1 | 286 | 0.0 | 584 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004900 | Msa0121300 | 0.800078 | 1.705639e-48 | -8.615850e-47 |
| Msa0011010 | Msa0121300 | 0.817914 | 2.575617e-52 | -8.615850e-47 |
| Msa0011040 | Msa0121300 | 0.802900 | 4.504090e-49 | -8.615850e-47 |
| Msa0011870 | Msa0121300 | 0.824751 | 6.811198e-54 | -8.615850e-47 |
| Msa0013270 | Msa0121300 | 0.802370 | 5.795336e-49 | -8.615850e-47 |
| Msa0024650 | Msa0121300 | 0.831752 | 1.396525e-55 | -8.615850e-47 |
| Msa0025560 | Msa0121300 | 0.973548 | 1.290814e-136 | -8.615850e-47 |
| Msa0025570 | Msa0121300 | 0.822931 | 1.819364e-53 | -8.615850e-47 |
| Msa0028690 | Msa0121300 | 0.835046 | 2.107518e-56 | -8.615850e-47 |
| Msa0038150 | Msa0121300 | -0.804913 | 1.719060e-49 | -8.615850e-47 |
| Msa0048380 | Msa0121300 | 0.815024 | 1.142689e-51 | -8.615850e-47 |
| Msa0051980 | Msa0121300 | 0.807430 | 5.074293e-50 | -8.615850e-47 |
| Msa0060410 | Msa0121300 | 0.814151 | 1.783201e-51 | -8.615850e-47 |
| Msa0060690 | Msa0121300 | 0.805650 | 1.204725e-49 | -8.615850e-47 |
| Msa0072180 | Msa0121300 | 0.864038 | 1.620195e-64 | -8.615850e-47 |
| Msa0073110 | Msa0121300 | 0.835349 | 1.766989e-56 | -8.615850e-47 |
| Msa0097010 | Msa0121300 | 0.810197 | 1.299195e-50 | -8.615850e-47 |
| Msa0098380 | Msa0121300 | 0.820736 | 5.859408e-53 | -8.615850e-47 |
| Msa0105440 | Msa0121300 | 0.819243 | 1.286737e-52 | -8.615850e-47 |
| Msa0106540 | Msa0121300 | 0.803592 | 3.238773e-49 | -8.615850e-47 |
| Msa0116440 | Msa0121300 | 0.810149 | 1.330658e-50 | -8.615850e-47 |
| Msa0120450 | Msa0121300 | 0.824995 | 5.965941e-54 | -8.615850e-47 |
| Msa0121300 | Msa0121320 | 0.814539 | 1.463413e-51 | -8.615850e-47 |
| Msa0121300 | Msa0134780 | 0.810323 | 1.220467e-50 | -8.615850e-47 |
| Msa0121300 | Msa0141410 | 0.807416 | 5.109511e-50 | -8.615850e-47 |
| Msa0121300 | Msa0150000 | 0.814477 | 1.510253e-51 | -8.615850e-47 |
| Msa0121300 | Msa0151660 | 0.828616 | 8.141523e-55 | -8.615850e-47 |
| Msa0121300 | Msa0163690 | 0.836453 | 9.274966e-57 | -8.615850e-47 |
| Msa0121300 | Msa0166180 | 0.801214 | 1.000620e-48 | -8.615850e-47 |
| Msa0121300 | Msa0166190 | 0.960585 | 1.006622e-118 | -8.615850e-47 |
| Msa0121300 | Msa0167570 | -0.803400 | 3.549807e-49 | -8.615850e-47 |
| Msa0121300 | Msa0168750 | 0.814640 | 1.389962e-51 | -8.615850e-47 |
| Msa0121300 | Msa0185040 | 0.815679 | 8.169882e-52 | -8.615850e-47 |
| Msa0121300 | Msa0189990 | 0.808005 | 3.829498e-50 | -8.615850e-47 |
| Msa0121300 | Msa0197170 | 0.811279 | 7.581425e-51 | -8.615850e-47 |
| Msa0121300 | Msa0206370 | 0.810952 | 8.921716e-51 | -8.615850e-47 |
| Msa0121300 | Msa0211460 | 0.804967 | 1.674865e-49 | -8.615850e-47 |
| Msa0121300 | Msa0224870 | 0.846842 | 1.684946e-59 | -8.615850e-47 |
| Msa0121300 | Msa0230920 | 0.813588 | 2.372069e-51 | -8.615850e-47 |
| Msa0121300 | Msa0234150 | 0.813817 | 2.112714e-51 | -8.615850e-47 |
| Msa0121300 | Msa0244310 | 0.811071 | 8.409750e-51 | -8.615850e-47 |
| Msa0121300 | Msa0245660 | 0.804033 | 2.622606e-49 | -8.615850e-47 |
| Msa0121300 | Msa0247780 | 0.802405 | 5.698249e-49 | -8.615850e-47 |
| Msa0121300 | Msa0248320 | 0.804653 | 1.948541e-49 | -8.615850e-47 |
| Msa0121300 | Msa0253230 | -0.815419 | 9.333548e-52 | -8.615850e-47 |
| Msa0121300 | Msa0256920 | 0.803110 | 4.075747e-49 | -8.615850e-47 |
| Msa0121300 | Msa0273400 | 0.819639 | 1.044967e-52 | -8.615850e-47 |
| Msa0121300 | Msa0282830 | 0.824208 | 9.141727e-54 | -8.615850e-47 |
| Msa0121300 | Msa0282960 | 0.800012 | 1.759931e-48 | -8.615850e-47 |
| Msa0121300 | Msa0285890 | 0.813612 | 2.343977e-51 | -8.615850e-47 |
| Msa0121300 | Msa0287480 | 0.825719 | 4.020587e-54 | -8.615850e-47 |
| Msa0121300 | Msa0298000 | 0.812809 | 3.517126e-51 | -8.615850e-47 |
| Msa0121300 | Msa0300470 | 0.802632 | 5.117311e-49 | -8.615850e-47 |
| Msa0121300 | Msa0303900 | 0.808219 | 3.448110e-50 | -8.615850e-47 |
| Msa0121300 | Msa0307630 | 0.810046 | 1.400363e-50 | -8.615850e-47 |
| Msa0121300 | Msa0307740 | 0.808426 | 3.114701e-50 | -8.615850e-47 |
| Msa0121300 | Msa0318490 | 0.823013 | 1.741080e-53 | -8.615850e-47 |
| Msa0121300 | Msa0321240 | 0.822969 | 1.781970e-53 | -8.615850e-47 |
| Msa0121300 | Msa0333770 | 0.827728 | 1.332941e-54 | -8.615850e-47 |
| Msa0121300 | Msa0345050 | 0.831014 | 2.121844e-55 | -8.615850e-47 |
| Msa0121300 | Msa0354600 | 0.817099 | 3.931367e-52 | -8.615850e-47 |
| Msa0121300 | Msa0356240 | 0.801092 | 1.059918e-48 | -8.615850e-47 |
| Msa0121300 | Msa0356270 | 0.841604 | 4.297168e-58 | -8.615850e-47 |
| Msa0121300 | Msa0357310 | 0.818409 | 1.990214e-52 | -8.615850e-47 |
| Msa0121300 | Msa0357470 | 0.815623 | 8.408916e-52 | -8.615850e-47 |
| Msa0121300 | Msa0357510 | 0.816309 | 5.909578e-52 | -8.615850e-47 |
| Msa0121300 | Msa0357530 | 0.814628 | 1.398281e-51 | -8.615850e-47 |
| Msa0121300 | Msa0357550 | 0.800939 | 1.138888e-48 | -8.615850e-47 |
| Msa0121300 | Msa0357560 | 0.807137 | 5.853097e-50 | -8.615850e-47 |
| Msa0121300 | Msa0369990 | 0.814486 | 1.503415e-51 | -8.615850e-47 |
| Msa0121300 | Msa0374470 | 0.808133 | 3.598023e-50 | -8.615850e-47 |
| Msa0121300 | Msa0374600 | 0.805049 | 1.609928e-49 | -8.615850e-47 |
| Msa0121300 | Msa0375790 | 0.815604 | 8.491519e-52 | -8.615850e-47 |
| Msa0121300 | Msa0380110 | 0.804369 | 2.232893e-49 | -8.615850e-47 |
| Msa0121300 | Msa0405200 | 0.814600 | 1.418622e-51 | -8.615850e-47 |
| Msa0121300 | Msa0415010 | 0.800472 | 1.418703e-48 | -8.615850e-47 |
| Msa0121300 | Msa0418230 | 0.846552 | 2.022015e-59 | -8.615850e-47 |
| Msa0121300 | Msa0423630 | 0.813026 | 3.151556e-51 | -8.615850e-47 |
| Msa0121300 | Msa0433090 | 0.807365 | 5.239059e-50 | -8.615850e-47 |
| Msa0121300 | Msa0448230 | 0.826734 | 2.306099e-54 | -8.615850e-47 |
| Msa0121300 | Msa0449500 | 0.828064 | 1.106488e-54 | -8.615850e-47 |
| Msa0121300 | Msa0454770 | 0.810766 | 9.789134e-51 | -8.615850e-47 |
| Msa0121300 | Msa0459930 | 0.821776 | 3.373366e-53 | -8.615850e-47 |
| Msa0121300 | Msa0464620 | 0.832677 | 8.247201e-56 | -8.615850e-47 |
| Msa0121300 | Msa0474660 | -0.806312 | 8.743204e-50 | -8.615850e-47 |
| Msa0121300 | Msa0480900 | -0.822026 | 2.952524e-53 | -8.615850e-47 |
| Msa0121300 | Msa0481670 | 0.807582 | 4.711186e-50 | -8.615850e-47 |
| Msa0121300 | Msa0490100 | 0.800070 | 1.712713e-48 | -8.615850e-47 |
| Msa0121300 | Msa0497680 | 0.813595 | 2.363883e-51 | -8.615850e-47 |
| Msa0121300 | Msa0501080 | 0.816607 | 5.068354e-52 | -8.615850e-47 |
| Msa0121300 | Msa0510050 | 0.810141 | 1.335595e-50 | -8.615850e-47 |
| Msa0121300 | Msa0524710 | 0.816365 | 5.743020e-52 | -8.615850e-47 |
| Msa0121300 | Msa0529110 | 0.806216 | 9.160215e-50 | -8.615850e-47 |
| Msa0121300 | Msa0531050 | 0.841874 | 3.646576e-58 | -8.615850e-47 |
| Msa0121300 | Msa0540640 | 0.828463 | 8.868276e-55 | -8.615850e-47 |
| Msa0121300 | Msa0545680 | 0.804374 | 2.227632e-49 | -8.615850e-47 |
| Msa0121300 | Msa0547370 | 0.823185 | 1.587188e-53 | -8.615850e-47 |
| Msa0121300 | Msa0557240 | 0.813885 | 2.040947e-51 | -8.615850e-47 |
| Msa0121300 | Msa0560060 | 0.802664 | 5.039222e-49 | -8.615850e-47 |
| Msa0121300 | Msa0560950 | 0.800671 | 1.292038e-48 | -8.615850e-47 |
| Msa0121300 | Msa0561830 | 0.802652 | 5.068182e-49 | -8.615850e-47 |
| Msa0121300 | Msa0566280 | 0.822487 | 2.307836e-53 | -8.615850e-47 |
| Msa0121300 | Msa0566490 | 0.808076 | 3.699696e-50 | -8.615850e-47 |
| Msa0121300 | Msa0567330 | 0.852982 | 3.228106e-61 | -8.615850e-47 |
| Msa0121300 | Msa0567570 | 0.850019 | 2.225302e-60 | -8.615850e-47 |
| Msa0121300 | Msa0576320 | 0.845921 | 3.003402e-59 | -8.615850e-47 |
| Msa0121300 | Msa0581350 | 0.807390 | 5.174041e-50 | -8.615850e-47 |
| Msa0121300 | Msa0587930 | 0.809135 | 2.197515e-50 | -8.615850e-47 |
| Msa0121300 | Msa0588040 | 0.826877 | 2.131927e-54 | -8.615850e-47 |
| Msa0121300 | Msa0595270 | 0.803569 | 3.274932e-49 | -8.615850e-47 |
| Msa0121300 | Msa0597180 | 0.801410 | 9.124105e-49 | -8.615850e-47 |
| Msa0121300 | Msa0597800 | 0.833069 | 6.589896e-56 | -8.615850e-47 |
| Msa0121300 | Msa0597820 | 0.826685 | 2.368579e-54 | -8.615850e-47 |
| Msa0121300 | Msa0598310 | 0.824713 | 6.953814e-54 | -8.615850e-47 |
| Msa0121300 | Msa0602100 | 0.804315 | 2.291893e-49 | -8.615850e-47 |
| Msa0121300 | Msa0604280 | 0.817985 | 2.482149e-52 | -8.615850e-47 |
| Msa0121300 | Msa0615070 | 0.807515 | 4.867797e-50 | -8.615850e-47 |
| Msa0121300 | Msa0628200 | 0.835436 | 1.680388e-56 | -8.615850e-47 |
| Msa0121300 | Msa0636540 | 0.814521 | 1.476513e-51 | -8.615850e-47 |
| Msa0121300 | Msa0637590 | 0.825070 | 5.728094e-54 | -8.615850e-47 |
| Msa0121300 | Msa0637700 | 0.838032 | 3.658084e-57 | -8.615850e-47 |
| Msa0121300 | Msa0643230 | 0.842083 | 3.210985e-58 | -8.615850e-47 |
| Msa0121300 | Msa0644340 | 0.800171 | 1.633320e-48 | -8.615850e-47 |
| Msa0121300 | Msa0647300 | 0.803784 | 2.955619e-49 | -8.615850e-47 |
| Msa0121300 | Msa0652590 | 0.810592 | 1.067663e-50 | -8.615850e-47 |
| Msa0121300 | Msa0657710 | 0.861280 | 1.146621e-63 | -8.615850e-47 |
| Msa0121300 | Msa0657720 | 0.836709 | 7.981979e-57 | -8.615850e-47 |
| Msa0121300 | Msa0658150 | 0.826720 | 2.323402e-54 | -8.615850e-47 |
| Msa0121300 | Msa0675630 | 0.824086 | 9.767491e-54 | -8.615850e-47 |
| Msa0121300 | Msa0677130 | 0.808279 | 3.348897e-50 | -8.615850e-47 |
| Msa0121300 | Msa0680460 | 0.818674 | 1.732734e-52 | -8.615850e-47 |
| Msa0121300 | Msa0682110 | 0.826207 | 3.079003e-54 | -8.615850e-47 |
| Msa0121300 | Msa0682160 | 0.821729 | 3.457775e-53 | -8.615850e-47 |
| Msa0121300 | Msa0682910 | 0.823586 | 1.278661e-53 | -8.615850e-47 |
| Msa0121300 | Msa0686830 | 0.808891 | 2.478922e-50 | -8.615850e-47 |
| Msa0121300 | Msa0699170 | 0.805483 | 1.306451e-49 | -8.615850e-47 |
| Msa0121300 | Msa0702790 | 0.838694 | 2.469007e-57 | -8.615850e-47 |
| Msa0121300 | Msa0702800 | 0.857905 | 1.187072e-62 | -8.615850e-47 |
| Msa0121300 | Msa0703000 | 0.827000 | 1.991679e-54 | -8.615850e-47 |
| Msa0121300 | Msa0707330 | 0.820743 | 5.838012e-53 | -8.615850e-47 |
| Msa0121300 | Msa0716000 | 0.817572 | 3.075489e-52 | -8.615850e-47 |
| Msa0121300 | Msa0722890 | 0.802924 | 4.453276e-49 | -8.615850e-47 |
| Msa0121300 | Msa0723090 | 0.802619 | 5.147530e-49 | -8.615850e-47 |
| Msa0121300 | Msa0725580 | 0.804478 | 2.119171e-49 | -8.615850e-47 |
| Msa0121300 | Msa0733560 | 0.801334 | 9.454962e-49 | -8.615850e-47 |
| Msa0121300 | Msa0736920 | 0.822541 | 2.241683e-53 | -8.615850e-47 |
| Msa0121300 | Msa0743370 | 0.808736 | 2.675542e-50 | -8.615850e-47 |
| Msa0121300 | Msa0750790 | 0.806512 | 7.935932e-50 | -8.615850e-47 |
| Msa0121300 | Msa0758990 | 0.814697 | 1.349941e-51 | -8.615850e-47 |
| Msa0121300 | Msa0773030 | 0.847954 | 8.336805e-60 | -8.615850e-47 |
| Msa0121300 | Msa0778570 | 0.821061 | 4.931367e-53 | -8.615850e-47 |
| Msa0121300 | Msa0792410 | 0.811274 | 7.600259e-51 | -8.615850e-47 |
| Msa0121300 | Msa0800120 | 0.832618 | 8.530435e-56 | -8.615850e-47 |
| Msa0121300 | Msa0800150 | 0.827423 | 1.577466e-54 | -8.615850e-47 |
| Msa0121300 | Msa0800180 | 0.810439 | 1.151998e-50 | -8.615850e-47 |
| Msa0121300 | Msa0801920 | -0.802129 | 6.494349e-49 | -8.615850e-47 |
| Msa0121300 | Msa0802600 | 0.815770 | 7.797999e-52 | -8.615850e-47 |
| Msa0121300 | Msa0803880 | 0.801049 | 1.081405e-48 | -8.615850e-47 |
| Msa0121300 | Msa0810330 | 0.819289 | 1.256068e-52 | -8.615850e-47 |
| Msa0121300 | Msa0812720 | 0.818520 | 1.877797e-52 | -8.615850e-47 |
| Msa0121300 | Msa0815940 | 0.816084 | 6.634064e-52 | -8.615850e-47 |
| Msa0121300 | Msa0827340 | -0.800132 | 1.663151e-48 | -8.615850e-47 |
| Msa0121300 | Msa0828950 | 0.836310 | 1.008677e-56 | -8.615850e-47 |
| Msa0121300 | Msa0828960 | 0.856277 | 3.587890e-62 | -8.615850e-47 |
| Msa0121300 | Msa0829250 | -0.805313 | 1.418143e-49 | -8.615850e-47 |
| Msa0121300 | Msa0829990 | 0.807304 | 5.395495e-50 | -8.615850e-47 |
| Msa0121300 | Msa0831310 | 0.828286 | 9.783173e-55 | -8.615850e-47 |
| Msa0121300 | Msa0838120 | -0.804014 | 2.647002e-49 | -8.615850e-47 |
| Msa0121300 | Msa0838210 | 0.829894 | 3.985993e-55 | -8.615850e-47 |
| Msa0121300 | Msa0850640 | 0.838049 | 3.621767e-57 | -8.615850e-47 |
| Msa0121300 | Msa0854230 | 0.810155 | 1.326428e-50 | -8.615850e-47 |
| Msa0121300 | Msa0873880 | 0.814479 | 1.508488e-51 | -8.615850e-47 |
| Msa0121300 | Msa0873910 | 0.828914 | 6.897810e-55 | -8.615850e-47 |
| Msa0121300 | Msa0890210 | 0.800896 | 1.162496e-48 | -8.615850e-47 |
| Msa0121300 | Msa0898970 | 0.818338 | 2.064625e-52 | -8.615850e-47 |
| Msa0121300 | Msa0905570 | 0.807411 | 5.121678e-50 | -8.615850e-47 |
| Msa0121300 | Msa0906660 | 0.834005 | 3.847691e-56 | -8.615850e-47 |
| Msa0121300 | Msa0906680 | 0.810193 | 1.302131e-50 | -8.615850e-47 |
| Msa0121300 | Msa0908270 | -0.804473 | 2.124538e-49 | -8.615850e-47 |
| Msa0121300 | Msa0908280 | -0.808350 | 3.233207e-50 | -8.615850e-47 |
| Msa0121300 | Msa0908350 | -0.808195 | 3.490284e-50 | -8.615850e-47 |
| Msa0121300 | Msa0908500 | -0.805548 | 1.265596e-49 | -8.615850e-47 |
| Msa0121300 | Msa0908690 | -0.801340 | 9.432050e-49 | -8.615850e-47 |
| Msa0121300 | Msa0909260 | 0.836849 | 7.350401e-57 | -8.615850e-47 |
| Msa0121300 | Msa0925940 | 0.817699 | 2.879450e-52 | -8.615850e-47 |
| Msa0121300 | Msa0951200 | 0.806394 | 8.404118e-50 | -8.615850e-47 |
| Msa0121300 | Msa0964510 | 0.808261 | 3.377735e-50 | -8.615850e-47 |
| Msa0121300 | Msa0967780 | 0.802735 | 4.872073e-49 | -8.615850e-47 |
| Msa0121300 | Msa0973080 | -0.802392 | 5.734230e-49 | -8.615850e-47 |
| Msa0121300 | Msa0975950 | 0.807348 | 5.282180e-50 | -8.615850e-47 |
| Msa0121300 | Msa0975960 | 0.806664 | 7.371767e-50 | -8.615850e-47 |
| Msa0121300 | Msa1006030 | 0.822049 | 2.915973e-53 | -8.615850e-47 |
| Msa0121300 | Msa1007900 | 0.862621 | 4.450113e-64 | -8.615850e-47 |
| Msa0121300 | Msa1019420 | 0.848940 | 4.448548e-60 | -8.615850e-47 |
| Msa0121300 | Msa1024480 | 0.823224 | 1.554223e-53 | -8.615850e-47 |
| Msa0121300 | Msa1029820 | 0.833405 | 5.435379e-56 | -8.615850e-47 |
| Msa0121300 | Msa1029860 | 0.827930 | 1.191529e-54 | -8.615850e-47 |
| Msa0121300 | Msa1035050 | 0.816999 | 4.139121e-52 | -8.615850e-47 |
| Msa0121300 | Msa1042300 | 0.811202 | 7.876253e-51 | -8.615850e-47 |
| Msa0121300 | Msa1044250 | 0.808004 | 3.831378e-50 | -8.615850e-47 |
| Msa0121300 | Msa1048390 | 0.810270 | 1.253253e-50 | -8.615850e-47 |
| Msa0121300 | Msa1049380 | 0.849010 | 4.254959e-60 | -8.615850e-47 |
| Msa0121300 | Msa1049400 | 0.817587 | 3.052013e-52 | -8.615850e-47 |
| Msa0121300 | Msa1062060 | 0.843465 | 1.378225e-58 | -8.615850e-47 |
| Msa0121300 | Msa1062290 | 0.846582 | 1.984379e-59 | -8.615850e-47 |
| Msa0121300 | Msa1068730 | 0.813978 | 1.946455e-51 | -8.615850e-47 |
| Msa0121300 | Msa1068940 | 0.824252 | 8.928215e-54 | -8.615850e-47 |
| Msa0121300 | Msa1075090 | 0.811494 | 6.809218e-51 | -8.615850e-47 |
| Msa0121300 | Msa1085820 | 0.804699 | 1.905547e-49 | -8.615850e-47 |
| Msa0121300 | Msa1087210 | 0.816478 | 5.418060e-52 | -8.615850e-47 |
| Msa0121300 | Msa1089990 | 0.816271 | 6.027269e-52 | -8.615850e-47 |
| Msa0121300 | Msa1092310 | 0.820811 | 5.631560e-53 | -8.615850e-47 |
| Msa0121300 | Msa1100330 | 0.819869 | 9.261433e-53 | -8.615850e-47 |
| Msa0121300 | Msa1103450 | 0.812945 | 3.283069e-51 | -8.615850e-47 |
| Msa0121300 | Msa1106030 | 0.821783 | 3.360448e-53 | -8.615850e-47 |
| Msa0121300 | Msa1107220 | 0.841732 | 3.974476e-58 | -8.615850e-47 |
| Msa0121300 | Msa1107520 | 0.823361 | 1.443768e-53 | -8.615850e-47 |
| Msa0121300 | Msa1108560 | 0.830992 | 2.148114e-55 | -8.615850e-47 |
| Msa0121300 | Msa1111910 | 0.813054 | 3.107989e-51 | -8.615850e-47 |
| Msa0121300 | Msa1116090 | 0.813799 | 2.131409e-51 | -8.615850e-47 |
| Msa0121300 | Msa1120960 | 0.801322 | 9.508017e-49 | -8.615850e-47 |
| Msa0121300 | Msa1124220 | 0.802941 | 4.418483e-49 | -8.615850e-47 |
| Msa0121300 | Msa1125740 | 0.804632 | 1.967722e-49 | -8.615850e-47 |
| Msa0121300 | Msa1136630 | 0.828933 | 6.823832e-55 | -8.615850e-47 |
| Msa0121300 | Msa1136690 | 0.855129 | 7.760552e-62 | -8.615850e-47 |
| Msa0121300 | Msa1136760 | 0.836294 | 1.018039e-56 | -8.615850e-47 |
| Msa0121300 | Msa1143260 | 0.821707 | 3.499869e-53 | -8.615850e-47 |
| Msa0121300 | Msa1149910 | 0.826334 | 2.872782e-54 | -8.615850e-47 |
| Msa0121300 | Msa1150760 | 0.834309 | 3.228902e-56 | -8.615850e-47 |
| Msa0121300 | Msa1154060 | 0.813247 | 2.819483e-51 | -8.615850e-47 |
| Msa0121300 | Msa1154320 | 0.820118 | 8.122185e-53 | -8.615850e-47 |
| Msa0121300 | Msa1155610 | 0.803691 | 3.088734e-49 | -8.615850e-47 |
| Msa0121300 | Msa1156710 | 0.818788 | 1.632408e-52 | -8.615850e-47 |
| Msa0121300 | Msa1160540 | 0.822969 | 1.781862e-53 | -8.615850e-47 |
| Msa0121300 | Msa1167310 | 0.803221 | 3.866672e-49 | -8.615850e-47 |
| Msa0121300 | Msa1183870 | 0.827442 | 1.560726e-54 | -8.615850e-47 |
| Msa0121300 | Msa1184680 | 0.811240 | 7.727762e-51 | -8.615850e-47 |
| Msa0121300 | Msa1185270 | 0.802428 | 5.636455e-49 | -8.615850e-47 |
| Msa0121300 | Msa1187480 | 0.803933 | 2.752249e-49 | -8.615850e-47 |
| Msa0121300 | Msa1191270 | 0.820107 | 8.166945e-53 | -8.615850e-47 |
| Msa0121300 | Msa1201760 | 0.812551 | 4.004563e-51 | -8.615850e-47 |
| Msa0121300 | Msa1202110 | 0.812683 | 3.747565e-51 | -8.615850e-47 |
| Msa0121300 | Msa1202800 | 0.870988 | 9.625103e-67 | -8.615850e-47 |
| Msa0121300 | Msa1203650 | 0.811831 | 5.751492e-51 | -8.615850e-47 |
| Msa0121300 | Msa1211940 | 0.823829 | 1.122106e-53 | -8.615850e-47 |
| Msa0121300 | Msa1212080 | 0.819502 | 1.123304e-52 | -8.615850e-47 |
| Msa0121300 | Msa1215740 | 0.800367 | 1.490111e-48 | -8.615850e-47 |
| Msa0121300 | Msa1221270 | 0.819071 | 1.408211e-52 | -8.615850e-47 |
| Msa0121300 | Msa1223710 | 0.833380 | 5.512671e-56 | -8.615850e-47 |
| Msa0121300 | Msa1223960 | 0.812326 | 4.485098e-51 | -8.615850e-47 |
| Msa0121300 | Msa1223990 | 0.821677 | 3.556321e-53 | -8.615850e-47 |
| Msa0121300 | Msa1228660 | 0.816184 | 6.302769e-52 | -8.615850e-47 |
| Msa0121300 | Msa1239210 | 0.806109 | 9.649041e-50 | -8.615850e-47 |
| Msa0121300 | Msa1241960 | 0.803799 | 2.933636e-49 | -8.615850e-47 |
| Msa0121300 | Msa1242160 | 0.824453 | 8.006844e-54 | -8.615850e-47 |
| Msa0121300 | Msa1246830 | 0.811317 | 7.436129e-51 | -8.615850e-47 |
| Msa0121300 | Msa1250660 | 0.813285 | 2.765526e-51 | -8.615850e-47 |
| Msa0121300 | Msa1254870 | 0.812718 | 3.682387e-51 | -8.615850e-47 |
| Msa0121300 | Msa1255210 | 0.857857 | 1.225988e-62 | -8.615850e-47 |
| Msa0121300 | Msa1262900 | 0.801360 | 9.340315e-49 | -8.615850e-47 |
| Msa0121300 | Msa1263110 | 0.830607 | 2.669860e-55 | -8.615850e-47 |
| Msa0121300 | Msa1263370 | 0.800815 | 1.207446e-48 | -8.615850e-47 |
| Msa0121300 | Msa1265570 | 0.804754 | 1.856223e-49 | -8.615850e-47 |
| Msa0121300 | Msa1268360 | 0.840298 | 9.461977e-58 | -8.615850e-47 |
| Msa0121300 | Msa1268390 | 0.830862 | 2.312627e-55 | -8.615850e-47 |
| Msa0121300 | Msa1268420 | 0.806520 | 7.903276e-50 | -8.615850e-47 |
| Msa0121300 | Msa1269200 | 0.834278 | 3.288417e-56 | -8.615850e-47 |
| Msa0121300 | Msa1269500 | 0.813243 | 2.824660e-51 | -8.615850e-47 |
| Msa0121300 | Msa1273320 | 0.855447 | 6.271428e-62 | -8.615850e-47 |
| Msa0121300 | Msa1281780 | 0.800546 | 1.370152e-48 | -8.615850e-47 |
| Msa0121300 | Msa1283070 | 0.803928 | 2.758021e-49 | -8.615850e-47 |
| Msa0121300 | Msa1283930 | 0.838957 | 2.111185e-57 | -8.615850e-47 |
| Msa0121300 | Msa1284020 | 0.845861 | 3.117634e-59 | -8.615850e-47 |
| Msa0121300 | Msa1291070 | -0.802985 | 4.326654e-49 | -8.615850e-47 |
| Msa0121300 | Msa1295650 | 0.858704 | 6.861622e-63 | -8.615850e-47 |
| Msa0121300 | Msa1300570 | 0.801732 | 7.835803e-49 | -8.615850e-47 |
| Msa0121300 | Msa1301280 | -0.812409 | 4.302792e-51 | -8.615850e-47 |
| Msa0121300 | Msa1302630 | 0.801352 | 9.377178e-49 | -8.615850e-47 |
| Msa0121300 | Msa1322500 | 0.803527 | 3.340381e-49 | -8.615850e-47 |
| Msa0121300 | Msa1322960 | 0.841580 | 4.360069e-58 | -8.615850e-47 |
| Msa0121300 | Msa1322980 | 0.810741 | 9.914204e-51 | -8.615850e-47 |
| Msa0121300 | Msa1326640 | 0.806945 | 6.428922e-50 | -8.615850e-47 |
| Msa0121300 | Msa1326680 | 0.802704 | 4.945399e-49 | -8.615850e-47 |
| Msa0121300 | Msa1328430 | 0.813373 | 2.645246e-51 | -8.615850e-47 |
| Msa0121300 | Msa1331570 | -0.814813 | 1.272867e-51 | -8.615850e-47 |
| Msa0121300 | Msa1334670 | 0.805844 | 1.096908e-49 | -8.615850e-47 |
| Msa0121300 | Msa1343600 | 0.825929 | 3.585358e-54 | -8.615850e-47 |
| Msa0121300 | Msa1344450 | 0.820090 | 8.239773e-53 | -8.615850e-47 |
| Msa0121300 | Msa1354370 | -0.801962 | 7.030195e-49 | -8.615850e-47 |
| Msa0121300 | Msa1361980 | 0.809358 | 1.968443e-50 | -8.615850e-47 |
| Msa0121300 | Msa1362850 | 0.813017 | 3.166592e-51 | -8.615850e-47 |
| Msa0121300 | Msa1364690 | 0.810186 | 1.306297e-50 | -8.615850e-47 |
| Msa0121300 | Msa1365230 | 0.800772 | 1.231913e-48 | -8.615850e-47 |
| Msa0121300 | Msa1376880 | 0.811670 | 6.234279e-51 | -8.615850e-47 |
| Msa0121300 | Msa1384130 | 0.812473 | 4.165361e-51 | -8.615850e-47 |
| Msa0121300 | Msa1384700 | 0.807571 | 4.736591e-50 | -8.615850e-47 |
| Msa0121300 | Msa1386830 | 0.809633 | 1.717964e-50 | -8.615850e-47 |
| Msa0121300 | Msa1395080 | 0.827166 | 1.817908e-54 | -8.615850e-47 |
| Msa0121300 | Msa1398140 | 0.812741 | 3.639236e-51 | -8.615850e-47 |
| Msa0121300 | Msa1405530 | 0.800673 | 1.290582e-48 | -8.615850e-47 |
| Msa0121300 | Msa1405830 | 0.802975 | 4.347177e-49 | -8.615850e-47 |
| Msa0121300 | Msa1407810 | 0.855995 | 4.336802e-62 | -8.615850e-47 |
| Msa0121300 | Msa1417220 | 0.800953 | 1.131475e-48 | -8.615850e-47 |
| Msa0121300 | Msa1433360 | 0.865294 | 6.553899e-65 | -8.615850e-47 |
| Msa0121300 | Msa1437590 | 0.817223 | 3.686923e-52 | -8.615850e-47 |
| Msa0121300 | Msa1437780 | 0.858327 | 8.888227e-63 | -8.615850e-47 |
| Msa0121300 | Msa1439930 | 0.805535 | 1.273863e-49 | -8.615850e-47 |
| Msa0121300 | Msa1445530 | 0.850657 | 1.473767e-60 | -8.615850e-47 |
| Msa0121300 | Msa1455200 | 0.826310 | 2.909951e-54 | -8.615850e-47 |
| Msa0121300 | Msa1458270 | 0.820288 | 7.424872e-53 | -8.615850e-47 |
| Msa0121300 | Msa1462610 | 0.813436 | 2.562258e-51 | -8.615850e-47 |
| Msa0121300 | Msa1464140 | 0.805286 | 1.436620e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0121300 | MtrunA17_Chr1g0180331 | 96.853 | 286 | 8 | 1 | 1 | 285 | 1 | 286 | 0.0 | 584 |
| Msa0121300 | MtrunA17_Chr1g0180371 | 64.000 | 250 | 88 | 2 | 24 | 272 | 25 | 273 | 2.68e-115 | 333 |
| Msa0121300 | MtrunA17_Chr4g0028741 | 46.545 | 275 | 139 | 4 | 3 | 274 | 1 | 270 | 2.31e-86 | 259 |
| Msa0121300 | MtrunA17_Chr4g0028711 | 50.407 | 246 | 117 | 3 | 29 | 273 | 27 | 268 | 2.60e-86 | 259 |
| Msa0121300 | MtrunA17_Chr7g0264911 | 58.571 | 210 | 83 | 4 | 66 | 272 | 1 | 209 | 1.62e-80 | 242 |
| Msa0121300 | MtrunA17_Chr4g0028721 | 50.226 | 221 | 105 | 3 | 33 | 252 | 5 | 221 | 5.72e-76 | 232 |
| Msa0121300 | MtrunA17_Chr7g0257091 | 42.491 | 273 | 145 | 7 | 14 | 283 | 7 | 270 | 1.26e-70 | 219 |
| Msa0121300 | MtrunA17_Chr1g0178591 | 38.376 | 271 | 151 | 5 | 16 | 275 | 1 | 266 | 2.11e-63 | 200 |
| Msa0121300 | MtrunA17_Chr1g0178601 | 35.821 | 268 | 157 | 5 | 14 | 275 | 8 | 266 | 8.27e-59 | 188 |
| Msa0121300 | MtrunA17_Chr4g0028731 | 46.154 | 169 | 87 | 2 | 32 | 200 | 4 | 168 | 3.75e-48 | 159 |
| Msa0121300 | MtrunA17_Chr1g0178541 | 36.709 | 158 | 92 | 2 | 124 | 275 | 25 | 180 | 3.51e-29 | 109 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0121300 | AT1G08080.1 | 52.459 | 244 | 111 | 3 | 31 | 273 | 33 | 272 | 3.26e-89 | 267 |
| Msa0121300 | AT2G28210.1 | 46.691 | 272 | 133 | 5 | 10 | 273 | 5 | 272 | 7.49e-85 | 256 |
| Msa0121300 | AT4G20990.1 | 46.067 | 267 | 136 | 4 | 7 | 272 | 4 | 263 | 2.65e-80 | 244 |
| Msa0121300 | AT1G08065.1 | 47.126 | 261 | 131 | 5 | 15 | 272 | 12 | 268 | 1.98e-76 | 234 |
| Msa0121300 | AT4G21000.1 | 45.933 | 209 | 106 | 3 | 27 | 235 | 26 | 227 | 1.73e-64 | 203 |
| Msa0121300 | AT5G04180.1 | 40.154 | 259 | 151 | 2 | 16 | 273 | 4 | 259 | 4.56e-64 | 202 |
| Msa0121300 | AT3G52720.3 | 35.688 | 269 | 153 | 6 | 15 | 271 | 4 | 264 | 2.68e-53 | 175 |
| Msa0121300 | AT3G52720.4 | 35.688 | 269 | 153 | 6 | 15 | 271 | 4 | 264 | 2.68e-53 | 175 |
| Msa0121300 | AT3G52720.1 | 35.688 | 269 | 153 | 6 | 15 | 271 | 4 | 264 | 2.68e-53 | 175 |
| Msa0121300 | AT5G56330.1 | 39.592 | 245 | 104 | 5 | 31 | 273 | 133 | 335 | 2.90e-49 | 167 |
| Msa0121300 | AT3G52720.2 | 34.764 | 233 | 132 | 6 | 15 | 235 | 4 | 228 | 6.26e-43 | 147 |
| Msa0121300 | AT5G56330.2 | 44.068 | 177 | 92 | 5 | 31 | 204 | 133 | 305 | 8.39e-41 | 144 |
| Msa0121300 | AT2G28210.2 | 41.722 | 151 | 76 | 4 | 10 | 149 | 5 | 154 | 1.68e-35 | 125 |
Find 55 sgRNAs with CRISPR-Local
Find 155 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTGAATGTCGTAGGTATTT+TGG | 0.225329 | 1_3:-47075994 | Msa0121300:intron |
| GAAGAAGAAGAAAGAGTAAT+AGG | 0.241207 | 1_3:-47074920 | Msa0121300:CDS |
| TGCATTGGAAGATTTATATT+TGG | 0.272644 | 1_3:+47077088 | None:intergenic |
| ATCTTGTTTCCCTTAGGATT+TGG | 0.276829 | 1_3:+47075121 | None:intergenic |
| TTGATAACTTGACGATAGTT+TGG | 0.301018 | 1_3:+47077113 | None:intergenic |
| GTTGGTGCTTTCTATAAAAT+TGG | 0.304303 | 1_3:-47075091 | Msa0121300:CDS |
| TGAAAAGGGGCCACATCATT+GGG | 0.321798 | 1_3:-47077222 | Msa0121300:CDS |
| CACCTGAGAGAGAAAAGAAT+TGG | 0.332021 | 1_3:+47075063 | None:intergenic |
| TCTCTCATTAGACAAATCTA+TGG | 0.352209 | 1_3:+47077148 | None:intergenic |
| TACATACTTCCTGCCATTGA+TGG | 0.354563 | 1_3:+47075889 | None:intergenic |
| GTGAAAAGGGGCCACATCAT+TGG | 0.366240 | 1_3:-47077223 | Msa0121300:CDS |
| GTTGTGCTACTTTGTTTGAA+TGG | 0.383597 | 1_3:+47074218 | None:intergenic |
| AGAGAGTTCGATTATATTGA+AGG | 0.392656 | 1_3:-47077248 | Msa0121300:CDS |
| TATATTGAAGGAAGTGAAAA+GGG | 0.411180 | 1_3:-47077236 | Msa0121300:CDS |
| CTATTGTTATGTGGCTGCCT+TGG | 0.418783 | 1_3:+47074266 | None:intergenic |
| TTGTGCTACTTTGTTTGAAT+GGG | 0.456274 | 1_3:+47074219 | None:intergenic |
| AAGATATATTATAGATATGT+TGG | 0.456587 | 1_3:-47074863 | Msa0121300:CDS |
| TTATATTGAAGGAAGTGAAA+AGG | 0.457697 | 1_3:-47077237 | Msa0121300:CDS |
| TCTATTGATGATAGTTGCAT+TGG | 0.461958 | 1_3:+47077073 | None:intergenic |
| TCAATAAGAGCTCAAGAAGT+TGG | 0.462460 | 1_3:-47077417 | Msa0121300:intron |
| CCTTCTGAACATTCCATCAA+TGG | 0.483593 | 1_3:-47075902 | Msa0121300:CDS |
| ACAGCAATCTTGTTTCCCTT+AGG | 0.488040 | 1_3:+47075115 | None:intergenic |
| ACCTGAGAGAGAAAAGAATT+GGG | 0.488834 | 1_3:+47075064 | None:intergenic |
| GCATGTAAGTCCAAATCCTA+AGG | 0.503479 | 1_3:-47075131 | Msa0121300:CDS |
| CCCTCACAAATCCAAACAAA+AGG | 0.504506 | 1_3:-47074887 | Msa0121300:CDS |
| AATGCAACTATCATCAATAG+AGG | 0.507721 | 1_3:-47077071 | Msa0121300:CDS |
| GCTGGCTCAATACGTATCAA+TGG | 0.514482 | 1_3:-47075962 | Msa0121300:CDS |
| ACAACTCCTCCTTGCACTGA+AGG | 0.515253 | 1_3:-47074833 | Msa0121300:CDS |
| ATATGCTCACCGCAATATCA+TGG | 0.524254 | 1_3:+47077048 | None:intergenic |
| AAGGAGAGTGCCAGTGACAT+TGG | 0.529345 | 1_3:+47075921 | None:intergenic |
| GACAGTTTCAAAAGCACAAG+TGG | 0.535548 | 1_3:-47074434 | Msa0121300:CDS |
| TGTATGTCTCTATTGTTATG+TGG | 0.539821 | 1_3:+47074257 | None:intergenic |
| CATGTGGAACCTTGACAAGA+AGG | 0.544132 | 1_3:-47074807 | Msa0121300:intron |
| GAATGGGCAGCTTGTAAACA+TGG | 0.547630 | 1_3:-47077185 | Msa0121300:CDS |
| CTGAACATTCCATCAATGGC+AGG | 0.549730 | 1_3:-47075898 | Msa0121300:CDS |
| AAGCATGAGTGAAGCTCGAA+GGG | 0.565536 | 1_3:+47077464 | None:intergenic |
| CTCTCATTAGACAAATCTAT+GGG | 0.570666 | 1_3:+47077149 | None:intergenic |
| TGAATGGGTAGTATTTGTGT+AGG | 0.575102 | 1_3:+47074234 | None:intergenic |
| CAGAGATGAATGCAAGGCCA+AGG | 0.578908 | 1_3:-47074283 | Msa0121300:CDS |
| AAAGCATGAGTGAAGCTCGA+AGG | 0.587705 | 1_3:+47077463 | None:intergenic |
| CACATGACACCTTCAGTGCA+AGG | 0.589535 | 1_3:+47074824 | None:intergenic |
| AAAAGGGGCCACATCATTGG+GGG | 0.598096 | 1_3:-47077220 | Msa0121300:CDS |
| GAAAAGGGGCCACATCATTG+GGG | 0.601409 | 1_3:-47077221 | Msa0121300:CDS |
| CCATTGATGGAATGTTCAGA+AGG | 0.605461 | 1_3:+47075902 | None:intergenic |
| CTTGCACTGAAGGTGTCATG+TGG | 0.609373 | 1_3:-47074823 | Msa0121300:CDS |
| CAATAGAGGCCATGATATTG+CGG | 0.609893 | 1_3:-47077057 | Msa0121300:intron |
| AGCATGCAGAGATGAATGCA+AGG | 0.630599 | 1_3:-47074289 | Msa0121300:CDS |
| GGAAACAAGATTGCTGTGGT+TGG | 0.632458 | 1_3:-47075109 | Msa0121300:CDS |
| CATGTAAGTCCAAATCCTAA+GGG | 0.667122 | 1_3:-47075130 | Msa0121300:CDS |
| ATATTGAAGGAAGTGAAAAG+GGG | 0.680584 | 1_3:-47077235 | Msa0121300:CDS |
| TAAGGGAAACAAGATTGCTG+TGG | 0.684027 | 1_3:-47075113 | Msa0121300:CDS |
| GGAAGAAGACATAAAACACA+TGG | 0.697390 | 1_3:-47074948 | Msa0121300:CDS |
| ATATGACTTAGAGATGCACA+TGG | 0.747184 | 1_3:-47075155 | Msa0121300:CDS |
| ATGACACCTTCAGTGCAAGG+AGG | 0.754290 | 1_3:+47074827 | None:intergenic |
| AAAGGGGCCACATCATTGGG+GGG | 0.779968 | 1_3:-47077219 | Msa0121300:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATATTTTATGATTTTTTGT+TGG | - | chr1_3:47074775-47074794 | Msa0121300:intron | 10.0% |
| !! | ATATAATATAAATTTAAACC+CGG | - | chr1_3:47074957-47074976 | Msa0121300:intron | 10.0% |
| !! | AATTAATAAATATGTCTATA+GGG | + | chr1_3:47075063-47075082 | None:intergenic | 10.0% |
| !! | AAATTAATAAATATGTCTAT+AGG | + | chr1_3:47075064-47075083 | None:intergenic | 10.0% |
| !!! | TTTTTTTAATTAATCAGAAA+TGG | - | chr1_3:47075505-47075524 | Msa0121300:intron | 10.0% |
| !! | GCATAATATAATTTATTAAA+AGG | + | chr1_3:47076074-47076093 | None:intergenic | 10.0% |
| !! | AGTTTATTCTAGATAAAAAA+GGG | + | chr1_3:47074360-47074379 | None:intergenic | 15.0% |
| !! | TAGTTTATTCTAGATAAAAA+AGG | + | chr1_3:47074361-47074380 | None:intergenic | 15.0% |
| !! | AAAAAATTATTTACCAACAA+AGG | + | chr1_3:47075489-47075508 | None:intergenic | 15.0% |
| !! | AAATAAAAAACAAATTAAGG+TGG | - | chr1_3:47075853-47075872 | Msa0121300:intron | 15.0% |
| !!! | TATTTTTTATCTCATAAAAG+CGG | + | chr1_3:47075887-47075906 | None:intergenic | 15.0% |
| !! | ATCAATGTTAAAAAAAAAAC+AGG | - | chr1_3:47076127-47076146 | Msa0121300:intron | 15.0% |
| !!! | TAAAAATGTCTAAAATTCAA+TGG | - | chr1_3:47076249-47076268 | Msa0121300:intron | 15.0% |
| !! | AAGATATATTATAGATATGT+TGG | - | chr1_3:47076837-47076856 | Msa0121300:intron | 15.0% |
| !! | AGAAGAAAAATGAATAAATA+AGG | + | chr1_3:47077159-47077178 | None:intergenic | 15.0% |
| !!! | TTTTTTGTTGTTGTTAAAAG+AGG | - | chr1_3:47074689-47074708 | Msa0121300:intron | 20.0% |
| !! | TATAATTATATCCGATTCTA+GGG | + | chr1_3:47074759-47074778 | None:intergenic | 20.0% |
| !! | ATATAATTATATCCGATTCT+AGG | + | chr1_3:47074760-47074779 | None:intergenic | 20.0% |
| !! | AAAGTCAAATGTATTTGATT+CGG | - | chr1_3:47074889-47074908 | Msa0121300:CDS | 20.0% |
| !! | AATATACTAGTACTACTATA+TGG | + | chr1_3:47075031-47075050 | None:intergenic | 20.0% |
| !!! | TTGCTTCTTTTTTTTTTTGA+AGG | - | chr1_3:47075102-47075121 | Msa0121300:CDS | 20.0% |
| !!! | TATCTTTTTGATACTTATGT+TGG | + | chr1_3:47075311-47075330 | None:intergenic | 20.0% |
| !! | TTCACATATAAATGATCTAA+TGG | + | chr1_3:47075692-47075711 | None:intergenic | 20.0% |
| !!! | AATTCTTAAATTTTCTAGCA+AGG | + | chr1_3:47076048-47076067 | None:intergenic | 20.0% |
| ! | TTATATTGAAGGAAGTGAAA+AGG | - | chr1_3:47074463-47074482 | Msa0121300:intron | 25.0% |
| ! | TATATTGAAGGAAGTGAAAA+GGG | - | chr1_3:47074464-47074483 | Msa0121300:intron | 25.0% |
| ! | TGCATTGGAAGATTTATATT+TGG | + | chr1_3:47074615-47074634 | None:intergenic | 25.0% |
| ! | TAACAACAACAAAAAAGTCA+TGG | + | chr1_3:47074685-47074704 | None:intergenic | 25.0% |
| !!! | TGTTGTTAAAAGAGGTTTTT+TGG | - | chr1_3:47074697-47074716 | Msa0121300:intron | 25.0% |
| !! | TGTAGTACATAAATTGACTT+TGG | - | chr1_3:47075218-47075237 | Msa0121300:intron | 25.0% |
| ! | ATCAAGATACAAATATCGAT+CGG | + | chr1_3:47075427-47075446 | None:intergenic | 25.0% |
| ! | TACGTGAAAGATTAACTTAA+TGG | + | chr1_3:47076207-47076226 | None:intergenic | 25.0% |
| !! | TACATACTTCTTTTACCAAA+AGG | - | chr1_3:47076445-47076464 | Msa0121300:intron | 25.0% |
| ! | AATGAATCTGTGAATTAAGT+TGG | - | chr1_3:47076731-47076750 | Msa0121300:intron | 25.0% |
| !! | AATATATCTTGCCTTTTGTT+TGG | + | chr1_3:47076827-47076846 | None:intergenic | 25.0% |
| ! | ATACTCGATAATTAATTCGT+TGG | - | chr1_3:47076956-47076975 | Msa0121300:intron | 25.0% |
| !! | AATGTAATTTTCAGCTCATT+TGG | + | chr1_3:47076996-47077015 | None:intergenic | 25.0% |
| !!! | AGTTTGACTTGATTAATTCA+CGG | - | chr1_3:47077050-47077069 | Msa0121300:intron | 25.0% |
| !! | TGCTTTTATCTAATGAAAGT+TGG | + | chr1_3:47077358-47077377 | None:intergenic | 25.0% |
| !!! | CAAATTTACTGTTTTAACTG+TGG | - | chr1_3:47077378-47077397 | Msa0121300:intron | 25.0% |
| ! | TGAAATTGTGCATTTTGTAG+AGG | - | chr1_3:47074424-47074443 | Msa0121300:CDS | 30.0% |
| AGAGAGTTCGATTATATTGA+AGG | - | chr1_3:47074452-47074471 | Msa0121300:intron | 30.0% | |
| ATATTGAAGGAAGTGAAAAG+GGG | - | chr1_3:47074465-47074484 | Msa0121300:intron | 30.0% | |
| CTCTCATTAGACAAATCTAT+GGG | + | chr1_3:47074554-47074573 | None:intergenic | 30.0% | |
| TCTCTCATTAGACAAATCTA+TGG | + | chr1_3:47074555-47074574 | None:intergenic | 30.0% | |
| ! | TTGATAACTTGACGATAGTT+TGG | + | chr1_3:47074590-47074609 | None:intergenic | 30.0% |
| ! | TCTATTGATGATAGTTGCAT+TGG | + | chr1_3:47074630-47074649 | None:intergenic | 30.0% |
| AATGCAACTATCATCAATAG+AGG | - | chr1_3:47074629-47074648 | Msa0121300:intron | 30.0% | |
| TCAATCATACAATCATCCAT+GGG | + | chr1_3:47074735-47074754 | None:intergenic | 30.0% | |
| ATCAATCATACAATCATCCA+TGG | + | chr1_3:47074736-47074755 | None:intergenic | 30.0% | |
| CTCTAGTAATACAAATCGAA+AGG | + | chr1_3:47074806-47074825 | None:intergenic | 30.0% | |
| !!! | GTTATATTTTAGTGTCTGAC+AGG | + | chr1_3:47075405-47075424 | None:intergenic | 30.0% |
| !!! | GTATGTTTTTCAATTTGCTG+AGG | - | chr1_3:47075532-47075551 | Msa0121300:intron | 30.0% |
| CATTTATATGTGAATGTCGT+AGG | - | chr1_3:47075698-47075717 | Msa0121300:intron | 30.0% | |
| ACATTGGTGCAAAAAGAATT+TGG | + | chr1_3:47075766-47075785 | None:intergenic | 30.0% | |
| ! | TAATGGTGTGTTTTCATTTC+AGG | + | chr1_3:47076190-47076209 | None:intergenic | 30.0% |
| !!! | ATTTTCAGGTAATGTAGAGT+CGG | + | chr1_3:47076375-47076394 | None:intergenic | 30.0% |
| AAATCACAACCAAATCGATA+TGG | + | chr1_3:47076474-47076493 | None:intergenic | 30.0% | |
| ! | GTTGGTGCTTTCTATAAAAT+TGG | - | chr1_3:47076609-47076628 | Msa0121300:intron | 30.0% |
| ! | TGTTGCTATTAGAGTAATGA+TGG | + | chr1_3:47076694-47076713 | None:intergenic | 30.0% |
| GAAGAAGAAGAAAGAGTAAT+AGG | - | chr1_3:47076780-47076799 | Msa0121300:intron | 30.0% | |
| !! | GTTTGACTTGATTAATTCAC+GGG | - | chr1_3:47077051-47077070 | Msa0121300:intron | 30.0% |
| TTGACTCAATAGAATTTGTC+CGG | + | chr1_3:47077099-47077118 | None:intergenic | 30.0% | |
| ! | TGTTGTGTCATTCATTGATT+TGG | - | chr1_3:47077216-47077235 | Msa0121300:CDS | 30.0% |
| AAACTGTCCTTATCTGAATA+GGG | + | chr1_3:47077254-47077273 | None:intergenic | 30.0% | |
| TGTATGTCTCTATTGTTATG+TGG | + | chr1_3:47077446-47077465 | None:intergenic | 30.0% | |
| !! | TTGTGCTACTTTGTTTGAAT+GGG | + | chr1_3:47077484-47077503 | None:intergenic | 30.0% |
| TCAATAAGAGCTCAAGAAGT+TGG | - | chr1_3:47074283-47074302 | Msa0121300:CDS | 35.0% | |
| GTATGATTGATCCCTAGAAT+CGG | - | chr1_3:47074745-47074764 | Msa0121300:intron | 35.0% | |
| TATGGTATACGTAGTAACGT+AGG | + | chr1_3:47075013-47075032 | None:intergenic | 35.0% | |
| !! | TTATGTGCATGAGTTTTGTG+CGG | + | chr1_3:47075192-47075211 | None:intergenic | 35.0% |
| CTCTTAAACTCAACCTTTGT+TGG | - | chr1_3:47075473-47075492 | Msa0121300:intron | 35.0% | |
| !! | TCCAACAAACGTTTGACTTT+TGG | - | chr1_3:47075587-47075606 | Msa0121300:intron | 35.0% |
| ! | TGTGAATGTCGTAGGTATTT+TGG | - | chr1_3:47075706-47075725 | Msa0121300:intron | 35.0% |
| !! | AATGTCGTAGGTATTTTGGA+GGG | - | chr1_3:47075710-47075729 | Msa0121300:intron | 35.0% |
| ! | AAATCGATATGGACTCCTTT+TGG | + | chr1_3:47076463-47076482 | None:intergenic | 35.0% |
| ! | AAAAGGAGTCCATATCGATT+TGG | - | chr1_3:47076462-47076481 | Msa0121300:intron | 35.0% |
| ATATGACTTAGAGATGCACA+TGG | - | chr1_3:47076545-47076564 | Msa0121300:intron | 35.0% | |
| CATGTAAGTCCAAATCCTAA+GGG | - | chr1_3:47076570-47076589 | Msa0121300:intron | 35.0% | |
| ! | ATCTTGTTTCCCTTAGGATT+TGG | + | chr1_3:47076582-47076601 | None:intergenic | 35.0% |
| ACCTGAGAGAGAAAAGAATT+GGG | + | chr1_3:47076639-47076658 | None:intergenic | 35.0% | |
| GGAAGAAGACATAAAACACA+TGG | - | chr1_3:47076752-47076771 | Msa0121300:intron | 35.0% | |
| !! | CCTTTTGTTTGGATTTGTGA+GGG | + | chr1_3:47076816-47076835 | None:intergenic | 35.0% |
| ! | CAACTTTTACCTTCTTGTCA+AGG | + | chr1_3:47076905-47076924 | None:intergenic | 35.0% |
| GATAATTAATTCGTTGGACG+TGG | - | chr1_3:47076962-47076981 | Msa0121300:intron | 35.0% | |
| AAGTGGAGTTGAACTTGATT+CGG | + | chr1_3:47077123-47077142 | None:intergenic | 35.0% | |
| CAAACAACCCTATTCAGATA+AGG | - | chr1_3:47077244-47077263 | Msa0121300:CDS | 35.0% | |
| GAAACTGTCCTTATCTGAAT+AGG | + | chr1_3:47077255-47077274 | None:intergenic | 35.0% | |
| TGAATGGGTAGTATTTGTGT+AGG | + | chr1_3:47077469-47077488 | None:intergenic | 35.0% | |
| !! | GTTGTGCTACTTTGTTTGAA+TGG | + | chr1_3:47077485-47077504 | None:intergenic | 35.0% |
| GGGGGAGATAAAAGAAGAAT+GGG | - | chr1_3:47074499-47074518 | Msa0121300:intron | 40.0% | |
| CAATAGAGGCCATGATATTG+CGG | - | chr1_3:47074643-47074662 | Msa0121300:intron | 40.0% | |
| ATATGCTCACCGCAATATCA+TGG | + | chr1_3:47074655-47074674 | None:intergenic | 40.0% | |
| TTAAACCCGGCTGCATTTAT+TGG | - | chr1_3:47074970-47074989 | Msa0121300:intron | 40.0% | |
| TGGATGATGACACAACTAGT+AGG | + | chr1_3:47075571-47075590 | None:intergenic | 40.0% | |
| GCCAAAAGTCAAACGTTTGT+TGG | + | chr1_3:47075591-47075610 | None:intergenic | 40.0% | |
| !! | GAATGTCGTAGGTATTTTGG+AGG | - | chr1_3:47075709-47075728 | Msa0121300:intron | 40.0% |
| !! | ATGTCGTAGGTATTTTGGAG+GGG | - | chr1_3:47075711-47075730 | Msa0121300:intron | 40.0% |
| ! | TCTTTTTGCACCAATGTCAC+TGG | - | chr1_3:47075769-47075788 | Msa0121300:intron | 40.0% |
| CCATTGATGGAATGTTCAGA+AGG | + | chr1_3:47075801-47075820 | None:intergenic | 40.0% | |
| CCTTCTGAACATTCCATCAA+TGG | - | chr1_3:47075798-47075817 | Msa0121300:intron | 40.0% | |
| TACATACTTCCTGCCATTGA+TGG | + | chr1_3:47075814-47075833 | None:intergenic | 40.0% | |
| !! | AGTCAACTAAGGTTGGTACT+TGG | + | chr1_3:47076024-47076043 | None:intergenic | 40.0% |
| TCTAGCAAGGAAGTCAACTA+AGG | + | chr1_3:47076035-47076054 | None:intergenic | 40.0% | |
| ATCTTGAATCGTCACGATGT+GGG | + | chr1_3:47076315-47076334 | None:intergenic | 40.0% | |
| AATCTTGAATCGTCACGATG+TGG | + | chr1_3:47076316-47076335 | None:intergenic | 40.0% | |
| ! | CATGGGAGGTAATCATTTTC+AGG | + | chr1_3:47076389-47076408 | None:intergenic | 40.0% |
| CTGAAAATGATTACCTCCCA+TGG | - | chr1_3:47076387-47076406 | Msa0121300:intron | 40.0% | |
| AAAATGATTACCTCCCATGG+AGG | - | chr1_3:47076390-47076409 | Msa0121300:intron | 40.0% | |
| GCATGTAAGTCCAAATCCTA+AGG | - | chr1_3:47076569-47076588 | Msa0121300:intron | 40.0% | |
| ! | ACAGCAATCTTGTTTCCCTT+AGG | + | chr1_3:47076588-47076607 | None:intergenic | 40.0% |
| TAAGGGAAACAAGATTGCTG+TGG | - | chr1_3:47076587-47076606 | Msa0121300:intron | 40.0% | |
| ! | TCCCAATTCTTTTCTCTCTC+AGG | - | chr1_3:47076635-47076654 | Msa0121300:intron | 40.0% |
| CACCTGAGAGAGAAAAGAAT+TGG | + | chr1_3:47076640-47076659 | None:intergenic | 40.0% | |
| CCCTCACAAATCCAAACAAA+AGG | - | chr1_3:47076813-47076832 | Msa0121300:intron | 40.0% | |
| !! | GCCTTTTGTTTGGATTTGTG+AGG | + | chr1_3:47076817-47076836 | None:intergenic | 40.0% |
| ! | GACAGTTTCAAAAGCACAAG+TGG | - | chr1_3:47077266-47077285 | Msa0121300:intron | 40.0% |
| ! | AAGCACAAGTGGATCTTTTG+AGG | - | chr1_3:47077277-47077296 | Msa0121300:intron | 40.0% |
| AAGCATGAGTGAAGCTCGAA+GGG | + | chr1_3:47074239-47074258 | None:intergenic | 45.0% | |
| AAAGCATGAGTGAAGCTCGA+AGG | + | chr1_3:47074240-47074259 | None:intergenic | 45.0% | |
| TGAAAAGGGGCCACATCATT+GGG | - | chr1_3:47074478-47074497 | Msa0121300:intron | 45.0% | |
| TTTATCTCCCCCCAATGATG+TGG | + | chr1_3:47074491-47074510 | None:intergenic | 45.0% | |
| GGGGGGAGATAAAAGAAGAA+TGG | - | chr1_3:47074498-47074517 | Msa0121300:intron | 45.0% | |
| GAATGGGCAGCTTGTAAACA+TGG | - | chr1_3:47074515-47074534 | Msa0121300:intron | 45.0% | |
| TTGGTAGAATCATGCTCCCA+TGG | - | chr1_3:47074716-47074735 | Msa0121300:intron | 45.0% | |
| CATGTCCAATAAATGCAGCC+GGG | + | chr1_3:47074978-47074997 | None:intergenic | 45.0% | |
| GCATGTCCAATAAATGCAGC+CGG | + | chr1_3:47074979-47074998 | None:intergenic | 45.0% | |
| TATGCAGCAGAGCAAAGCTT+GGG | + | chr1_3:47075257-47075276 | None:intergenic | 45.0% | |
| TTATGCAGCAGAGCAAAGCT+TGG | + | chr1_3:47075258-47075277 | None:intergenic | 45.0% | |
| ! | GCTGGCTCAATACGTATCAA+TGG | - | chr1_3:47075738-47075757 | Msa0121300:intron | 45.0% |
| CTGAACATTCCATCAATGGC+AGG | - | chr1_3:47075802-47075821 | Msa0121300:intron | 45.0% | |
| GCAAGGAAGTCAACTAAGGT+TGG | + | chr1_3:47076031-47076050 | None:intergenic | 45.0% | |
| TTCTTGCACGTTTCCTCCAT+GGG | + | chr1_3:47076406-47076425 | None:intergenic | 45.0% | |
| TTTCTTGCACGTTTCCTCCA+TGG | + | chr1_3:47076407-47076426 | None:intergenic | 45.0% | |
| GGAAACAAGATTGCTGTGGT+TGG | - | chr1_3:47076591-47076610 | Msa0121300:intron | 45.0% | |
| CATGTGGAACCTTGACAAGA+AGG | - | chr1_3:47076893-47076912 | Msa0121300:intron | 45.0% | |
| ! | ACTCGAGTTGTGTATTGAGC+CGG | - | chr1_3:47077077-47077096 | Msa0121300:CDS | 45.0% |
| !!! | ACAAGTGGATCTTTTGAGGC+AGG | - | chr1_3:47077281-47077300 | Msa0121300:intron | 45.0% |
| AGCATGCAGAGATGAATGCA+AGG | - | chr1_3:47077411-47077430 | Msa0121300:intron | 45.0% | |
| CTATTGTTATGTGGCTGCCT+TGG | + | chr1_3:47077437-47077456 | None:intergenic | 45.0% | |
| !! | TATAAATAAAAAACAAATTA+AGG | - | chr1_3:47075850-47075869 | Msa0121300:intron | 5.0% |
| GTGAAAAGGGGCCACATCAT+TGG | - | chr1_3:47074477-47074496 | Msa0121300:intron | 50.0% | |
| GAAAAGGGGCCACATCATTG+GGG | - | chr1_3:47074479-47074498 | Msa0121300:intron | 50.0% | |
| AAAAGGGGCCACATCATTGG+GGG | - | chr1_3:47074480-47074499 | Msa0121300:intron | 50.0% | |
| !! | GTATTTTGGAGGGGTGATGC+TGG | - | chr1_3:47075720-47075739 | Msa0121300:intron | 50.0% |
| !! | AAGGAGAGTGCCAGTGACAT+TGG | + | chr1_3:47075782-47075801 | None:intergenic | 50.0% |
| ACAACTCCTCCTTGCACTGA+AGG | - | chr1_3:47076867-47076886 | Msa0121300:intron | 50.0% | |
| ATGACACCTTCAGTGCAAGG+AGG | + | chr1_3:47076876-47076895 | None:intergenic | 50.0% | |
| CACATGACACCTTCAGTGCA+AGG | + | chr1_3:47076879-47076898 | None:intergenic | 50.0% | |
| !! | CTTGCACTGAAGGTGTCATG+TGG | - | chr1_3:47076877-47076896 | Msa0121300:intron | 50.0% |
| AAGGCTGAGCACGAATCAAG+TGG | + | chr1_3:47077140-47077159 | None:intergenic | 50.0% | |
| CAGAGATGAATGCAAGGCCA+AGG | - | chr1_3:47077417-47077436 | Msa0121300:intron | 50.0% | |
| AAAGGGGCCACATCATTGGG+GGG | - | chr1_3:47074481-47074500 | Msa0121300:intron | 55.0% | |
| CAGCAGAGCAAAGCTTGGGA+TGG | + | chr1_3:47075253-47075272 | None:intergenic | 55.0% | |
| TTGCACGTTTCCTCCATGGG+AGG | + | chr1_3:47076403-47076422 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 47074208 | 47077514 | 47074208 | ID=Msa0121300;Name=Msa0121300 |
| chr1_3 | mRNA | 47074208 | 47077514 | 47074208 | ID=Msa0121300-mRNA-1;Parent=Msa0121300;Name=Msa0121300-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0.5|0.28|1|1|1|7|0|285 |
| chr1_3 | exon | 47077418 | 47077514 | 47077418 | ID=Msa0121300-mRNA-1:exon:14170;Parent=Msa0121300-mRNA-1 |
| chr1_3 | exon | 47077058 | 47077278 | 47077058 | ID=Msa0121300-mRNA-1:exon:14169;Parent=Msa0121300-mRNA-1 |
| chr1_3 | exon | 47075896 | 47076002 | 47075896 | ID=Msa0121300-mRNA-1:exon:14168;Parent=Msa0121300-mRNA-1 |
| chr1_3 | exon | 47075066 | 47075177 | 47075066 | ID=Msa0121300-mRNA-1:exon:14167;Parent=Msa0121300-mRNA-1 |
| chr1_3 | exon | 47074808 | 47074972 | 47074808 | ID=Msa0121300-mRNA-1:exon:14166;Parent=Msa0121300-mRNA-1 |
| chr1_3 | exon | 47074408 | 47074461 | 47074408 | ID=Msa0121300-mRNA-1:exon:14165;Parent=Msa0121300-mRNA-1 |
| chr1_3 | exon | 47074208 | 47074309 | 47074208 | ID=Msa0121300-mRNA-1:exon:14164;Parent=Msa0121300-mRNA-1 |
| chr1_3 | CDS | 47077418 | 47077514 | 47077418 | ID=Msa0121300-mRNA-1:cds;Parent=Msa0121300-mRNA-1 |
| chr1_3 | CDS | 47077058 | 47077278 | 47077058 | ID=Msa0121300-mRNA-1:cds;Parent=Msa0121300-mRNA-1 |
| chr1_3 | CDS | 47075896 | 47076002 | 47075896 | ID=Msa0121300-mRNA-1:cds;Parent=Msa0121300-mRNA-1 |
| chr1_3 | CDS | 47075066 | 47075177 | 47075066 | ID=Msa0121300-mRNA-1:cds;Parent=Msa0121300-mRNA-1 |
| chr1_3 | CDS | 47074808 | 47074972 | 47074808 | ID=Msa0121300-mRNA-1:cds;Parent=Msa0121300-mRNA-1 |
| chr1_3 | CDS | 47074408 | 47074461 | 47074408 | ID=Msa0121300-mRNA-1:cds;Parent=Msa0121300-mRNA-1 |
| chr1_3 | CDS | 47074208 | 47074309 | 47074208 | ID=Msa0121300-mRNA-1:cds;Parent=Msa0121300-mRNA-1 |
| Gene Sequence |
| Protein sequence |
