AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1229300


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1229300 MtrunA17_Chr8g0342491 62.950 583 196 10 1 574 4 575 0.0 744
Msa1229300 MtrunA17_Chr2g0330151 62.478 581 193 11 6 574 8 575 0.0 729
Msa1229300 MtrunA17_Chr5g0427521 93.521 355 23 0 53 407 11 365 0.0 698
Msa1229300 MtrunA17_Chr1g0151241 53.789 541 235 8 36 573 43 571 0.0 597
Msa1229300 MtrunA17_Chr1g0178391 50.611 573 259 13 12 574 10 568 0.0 588
Msa1229300 MtrunA17_Chr1g0151301 51.292 542 249 8 33 571 14 543 0.0 577
Msa1229300 MtrunA17_Chr7g0266641 49.481 578 268 12 6 573 10 573 0.0 573
Msa1229300 MtrunA17_Chr1g0151321 49.819 554 257 13 33 578 14 554 0.0 550
Msa1229300 MtrunA17_Chr4g0056501 43.590 546 282 12 39 577 112 638 2.90e-143 429
Msa1229300 MtrunA17_Chr3g0079291 40.951 547 284 15 39 573 104 623 1.04e-131 398
Msa1229300 MtrunA17_Chr5g0427511 95.402 174 8 0 404 577 20 193 3.09e-117 345
Msa1229300 MtrunA17_Chr1g0151281 50.246 203 95 4 63 265 74 270 2.83e-66 217
Msa1229300 MtrunA17_Chr1g0151271 49.758 207 102 2 366 572 1 205 5.43e-62 203
Msa1229300 MtrunA17_Chr5g0427531 92.453 53 4 0 1 53 1 53 9.23e-28 106
Msa1229300 MtrunA17_Chr1g0151251 37.931 87 49 2 264 350 25 106 1.29e-14 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1229300 AT1G55120.1 56.552 580 222 10 4 574 16 574 0.0 662
Msa1229300 AT3G13790.2 56.667 570 223 11 18 574 23 581 0.0 650
Msa1229300 AT3G13790.1 56.370 573 223 12 18 574 23 584 0.0 645
Msa1229300 AT1G55120.4 58.034 529 207 7 52 574 15 534 0.0 637
Msa1229300 AT1G55120.3 57.011 542 217 8 39 574 28 559 0.0 635
Msa1229300 AT1G55120.2 57.955 528 207 7 53 574 17 535 0.0 635
Msa1229300 AT3G13784.1 55.904 542 222 9 35 571 39 568 0.0 633
Msa1229300 AT3G13784.4 55.596 545 222 10 35 571 39 571 0.0 627
Msa1229300 AT3G13784.2 55.596 545 222 10 35 571 39 571 0.0 627
Msa1229300 AT3G13790.5 57.714 525 206 10 55 574 1 514 0.0 611
Msa1229300 AT3G13790.4 57.714 525 206 10 55 574 1 514 0.0 611
Msa1229300 AT3G13790.3 57.714 525 206 10 55 574 1 514 0.0 611
Msa1229300 AT3G13784.3 55.619 525 216 9 52 571 6 518 0.0 607
Msa1229300 AT2G36190.1 50.175 572 253 12 18 570 24 582 0.0 550
Msa1229300 AT3G52600.1 48.908 595 265 15 1 570 1 581 0.0 547
Msa1229300 AT3G52600.3 52.068 532 228 11 52 570 10 527 0.0 532
Msa1229300 AT3G52600.2 51.985 529 227 11 55 570 1 515 0.0 527
Msa1229300 AT5G11920.1 46.333 559 278 11 22 574 3 545 2.59e-177 513
Msa1229300 AT5G11920.3 46.654 523 263 9 55 574 1 510 4.56e-169 490
Msa1229300 AT1G62660.1 42.279 544 292 13 39 574 106 635 6.01e-134 405
Msa1229300 AT1G12240.1 41.651 545 295 13 39 574 121 651 9.66e-133 402
Msa1229300 AT1G62660.2 41.856 528 288 12 52 574 24 537 3.42e-128 387
Msa1229300 AT5G11920.2 46.883 401 193 10 22 416 3 389 8.38e-126 376
Msa1229300 AT1G62660.4 40.125 481 271 11 99 574 1 469 1.66e-106 329
Msa1229300 AT1G62660.3 40.125 481 271 11 99 574 1 469 1.66e-106 329

Find 116 sgRNAs with CRISPR-Local

Find 528 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGACATGTTTATTCCTAAAA+AGG 0.158213 8_2:+4989390 Msa1229300:CDS
ACAATACTTGGCAACATAAT+AGG 0.169591 8_2:-4989016 None:intergenic
ACCATTTGGTTTACTAGTTT+TGG 0.186131 8_2:+4990576 Msa1229300:CDS
ATGTGTCTGACCCATTTCTT+AGG 0.192701 8_2:+4988969 Msa1229300:CDS
TTGCTCCATGTAGCACCTTT+TGG 0.214232 8_2:-4988740 None:intergenic
ATTTAACTCCAAAGTGTTAA+AGG 0.241377 8_2:+4990253 Msa1229300:CDS
AATACCATTCATCCAATTCT+TGG 0.242249 8_2:-4987901 None:intergenic
GAAAATGGTGCAAAAGTTAA+AGG 0.243040 8_2:+4990541 Msa1229300:CDS
ACTTTGGAGTTAAATTTAAT+AGG 0.270123 8_2:-4990245 None:intergenic
GGTTGTGTTGGTAGAAAATA+TGG 0.281254 8_2:-4988718 None:intergenic
AAAAGGATGGTCTGGAATTC+AGG 0.285122 8_2:+4989564 Msa1229300:CDS
ATATGTTTGATTCAAATTAA+AGG 0.290847 8_2:-4987853 None:intergenic
GGCTGCTCATGGGAACTTCT+TGG 0.293016 8_2:+4987754 Msa1229300:exon
CAACATCTATGTAATGAAAA+TGG 0.293823 8_2:+4990526 Msa1229300:CDS
AAGAACGATTTGACCACTTA+TGG 0.301717 8_2:+4990795 Msa1229300:CDS
ACTTCCAACCTTCCAAGAAT+TGG 0.308571 8_2:+4987889 Msa1229300:CDS
TGGCAACATAATAGGGTTCT+TGG 0.312775 8_2:-4989008 None:intergenic
TCTTCTTGTCTAGCCGTTGA+TGG 0.314926 8_2:+4991599 Msa1229300:three_prime_UTR
CAATACTTGGCAACATAATA+GGG 0.317867 8_2:-4989015 None:intergenic
CTTTGGAGTTAAATTTAATA+GGG 0.325405 8_2:-4990244 None:intergenic
GGAGCAACAATAGCATTGTT+TGG 0.337333 8_2:+4988756 Msa1229300:CDS
GAAGATGATGTAGTTGTGTT+AGG 0.337617 8_2:+4991734 Msa1229300:three_prime_UTR
TTTATCCATTCCCTAAGAAA+TGG 0.341223 8_2:-4988980 None:intergenic
GAGCAACAATAGCATTGTTT+GGG 0.350928 8_2:+4988757 Msa1229300:CDS
CAAGAGGATGATGTACAAAA+AGG 0.352852 8_2:+4989547 Msa1229300:CDS
CACCTTCATGCATTCAATAA+TGG 0.357955 8_2:+4991449 Msa1229300:CDS
TTTAACTCCAAAGTGTTAAA+GGG 0.358639 8_2:+4990254 Msa1229300:CDS
GACATCAATGGTTGTTGGTC+AGG 0.359938 8_2:+4988851 Msa1229300:CDS
ATTAGACCCTAGTTGGAAAA+TGG 0.369888 8_2:+4990498 Msa1229300:CDS
AAAGTTAAAGGGGTAGGATT+AGG 0.375310 8_2:+4990553 Msa1229300:CDS
GGGGTAGGATTAGGACCATT+TGG 0.379464 8_2:+4990562 Msa1229300:CDS
AAAATGGTGCAAAAGTTAAA+GGG 0.383052 8_2:+4990542 Msa1229300:CDS
TTTCAAAAGATCTAGTGAAT+TGG 0.396190 8_2:+4988789 Msa1229300:CDS
GGGGTAAGAGCATGTTGTAA+TGG 0.423951 8_2:-4988815 None:intergenic
AGGTAGAAGAATGAGTTTGA+TGG 0.423979 8_2:-4987833 None:intergenic
GGAACATTGCTTGAGATTGT+TGG 0.426729 8_2:+4990278 Msa1229300:CDS
AGCCAACAAAAGGACAATAA+AGG 0.427636 8_2:+4989124 Msa1229300:CDS
TGAAGTGAATGAACTTGAAA+AGG 0.430323 8_2:+4990468 Msa1229300:CDS
AGAGAAGAGTCTTATGGGGT+TGG 0.430603 8_2:+4989506 Msa1229300:CDS
TAGTATTAGATATGTGCTTA+AGG 0.445385 8_2:+4989309 Msa1229300:CDS
AGGGGATTCCTAGGACTCTC+TGG 0.448430 8_2:+4990156 Msa1229300:intron
TGTTCCTCCCTTTAACACTT+TGG 0.450052 8_2:-4990261 None:intergenic
TAAATTTGCAGGGGATTCCT+AGG 0.450136 8_2:+4990147 Msa1229300:intron
GGCAACATAATAGGGTTCTT+GGG 0.451043 8_2:-4989007 None:intergenic
AACTCAGTAGTGGAGAGTTT+CGG 0.451422 8_2:+4991362 Msa1229300:CDS
GGGTAAGAGCATGTTGTAAT+GGG 0.451788 8_2:-4988814 None:intergenic
GTGTTGATTAATAGTACAAT+TGG 0.452565 8_2:+4989256 Msa1229300:CDS
CTGACCCATTTCTTAGGGAA+TGG 0.457311 8_2:+4988975 Msa1229300:CDS
TCACATGATTGTTATTTGAT+TGG 0.457862 8_2:+4989349 Msa1229300:CDS
GGATTATGGAGGGTACTTGT+TGG 0.457892 8_2:+4989100 Msa1229300:CDS
TTATCCATTCCCTAAGAAAT+GGG 0.457943 8_2:-4988979 None:intergenic
CACAAGCATTAGACCCTAGT+TGG 0.458916 8_2:+4990491 Msa1229300:CDS
AGAGACACACGTACCTGCTT+TGG 0.460979 8_2:-4990684 None:intergenic
GGAGTTAAATTTAATAGGGT+TGG 0.463881 8_2:-4990240 None:intergenic
TTATTAATAATCAAGAATAA+TGG 0.467291 8_2:+4991541 Msa1229300:exon
TCATCCAATTCTTGGAAGGT+TGG 0.472554 8_2:-4987893 None:intergenic
TGACCAATCCAAGCAGTTGT+AGG 0.474791 8_2:-4989070 None:intergenic
GTGGAGAGTTTCGGAGCAAA+AGG 0.475980 8_2:+4991371 Msa1229300:CDS
CCTTCCAAGAATTGGATGAA+TGG 0.478873 8_2:+4987897 Msa1229300:CDS
CAATTTCAACTATAGGCCAC+TGG 0.483146 8_2:-4990205 None:intergenic
GAAGGTTGGAAGTGAAAAGA+AGG 0.484567 8_2:-4987879 None:intergenic
TTGGTCACCATGATGGATTA+TGG 0.487582 8_2:+4989086 Msa1229300:CDS
TTCTACCAACACAACCCAAA+AGG 0.490202 8_2:+4988725 Msa1229300:CDS
TTTCATTACATAGATGTTGA+GGG 0.491298 8_2:-4990522 None:intergenic
ATTGACAACTCCTCATAGAC+AGG 0.491385 8_2:-4990837 None:intergenic
CAACAACCATTGATGTCATA+TGG 0.494461 8_2:-4988845 None:intergenic
ATTTCTACAAAGGCTGCTCA+TGG 0.495021 8_2:+4987743 None:intergenic
AGATCAAGCAGTTAAGTGCT+TGG 0.495538 8_2:+4991486 Msa1229300:CDS
TTAGAGACCCTACAACTGCT+TGG 0.495629 8_2:+4989062 Msa1229300:CDS
TGTGTCTGACCCATTTCTTA+GGG 0.505150 8_2:+4988970 Msa1229300:CDS
GCTTGGATTGGTCACCATGA+TGG 0.507971 8_2:+4989079 Msa1229300:CDS
TATAGTCCCTTGTATCTCAT+AGG 0.508754 8_2:-4988695 None:intergenic
GCCAAAACTAGTAAACCAAA+TGG 0.525340 8_2:-4990577 None:intergenic
ACTTGTTGGAAGCCAACAAA+AGG 0.525732 8_2:+4989114 Msa1229300:CDS
CCATTCATCCAATTCTTGGA+AGG 0.525937 8_2:-4987897 None:intergenic
TTGATGTCATATGGTTGAGA+AGG 0.526541 8_2:-4988836 None:intergenic
AAGATGATGTAGTTGTGTTA+GGG 0.531260 8_2:+4991735 Msa1229300:three_prime_UTR
GACCCTACAACTGCTTGGAT+TGG 0.534224 8_2:+4989067 Msa1229300:CDS
ATTCCTGTGTATAAGATGGT+TGG 0.536262 8_2:-4988902 None:intergenic
ACAACCCAAAAGGTGCTACA+TGG 0.539926 8_2:+4988735 Msa1229300:CDS
GACCAATCCAAGCAGTTGTA+GGG 0.540603 8_2:-4989069 None:intergenic
AAATAACAATGAATTAACAT+TGG 0.543522 8_2:+4989423 Msa1229300:CDS
ATCCACAAAAGCTCCATAAG+TGG 0.546725 8_2:-4990808 None:intergenic
TGATGTCATATGGTTGAGAA+GGG 0.549569 8_2:-4988835 None:intergenic
AACACCATAGAGAATAATGA+AGG 0.550805 8_2:-4987793 None:intergenic
TGTTGGAGTAACAGCAGCAC+AGG 0.555952 8_2:+4990295 Msa1229300:CDS
TCTCAACCATATGACATCAA+TGG 0.558945 8_2:+4988839 Msa1229300:CDS
GGTGCAAAAGTTAAAGGGGT+AGG 0.561022 8_2:+4990547 Msa1229300:CDS
CATATGACATCAATGGTTGT+TGG 0.565842 8_2:+4988846 Msa1229300:CDS
TCATGTGTAGTGACCAAAGC+AGG 0.567201 8_2:+4990671 Msa1229300:CDS
GGAGTTGTCAATAAGAAGCT+TGG 0.569172 8_2:+4990848 Msa1229300:CDS
TAATGAATCTTCAATTCAAG+AGG 0.569616 8_2:+4989531 Msa1229300:CDS
TAGTAACATGTTTCCATCAA+CGG 0.569627 8_2:-4991612 None:intergenic
AAACCAACCATCTTATACAC+AGG 0.578300 8_2:+4988899 Msa1229300:CDS
ATTAGGTCCTATGAGATACA+AGG 0.580377 8_2:+4988688 Msa1229300:intron
ATTGTACTATTAATCAACAC+TGG 0.580762 8_2:-4989253 None:intergenic
GTCAATTCCTGTGTATAAGA+TGG 0.584907 8_2:-4988906 None:intergenic
TTCCATTATTGAATGCATGA+AGG 0.585126 8_2:-4991451 None:intergenic
AAATGGTGCAAAAGTTAAAG+GGG 0.592812 8_2:+4990543 Msa1229300:CDS
TGGTAGTTATGACACAATCA+AGG 0.597463 8_2:+4989369 Msa1229300:CDS
TTTCTACAAAGGCTGCTCAT+GGG 0.600547 8_2:+4987744 None:intergenic
AACTCCAAAGTGTTAAAGGG+AGG 0.603540 8_2:+4990257 Msa1229300:CDS
GGCTAGAGTTTATCCAACGT+TGG 0.604425 8_2:+4991409 Msa1229300:CDS
TTATCATTGATTGCCAACGT+TGG 0.604918 8_2:-4991422 None:intergenic
ACAGATAGATAACTCAGTAG+TGG 0.609325 8_2:+4991352 Msa1229300:intron
GGATGTGGACCCTGTCTATG+AGG 0.618347 8_2:+4990827 Msa1229300:CDS
CTGGGAAGCAATTGATCCAG+TGG 0.619077 8_2:+4990189 Msa1229300:CDS
AGCAACAATAGCATTGTTTG+GGG 0.625200 8_2:+4988758 Msa1229300:CDS
GTACCCTCCATAATCCATCA+TGG 0.639221 8_2:-4989093 None:intergenic
GTCACCATGATGGATTATGG+AGG 0.648186 8_2:+4989089 Msa1229300:CDS
TTAGGTCCTATGAGATACAA+GGG 0.659987 8_2:+4988689 Msa1229300:intron
TCACCATGATGGATTATGGA+GGG 0.660154 8_2:+4989090 Msa1229300:CDS
GATGTCATATGGTTGAGAAG+GGG 0.674306 8_2:-4988834 None:intergenic
TTTGTCATTCGAGAGAAATG+TGG 0.679370 8_2:-4988879 None:intergenic
GCAACAATAGCATTGTTTGG+GGG 0.690248 8_2:+4988759 Msa1229300:CDS
TTGACAACTCCTCATAGACA+GGG 0.706349 8_2:-4990836 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATATTAAAATAATTAAA+AGG + chr8_2:4989889-4989908 Msa1229300:intron 0.0%
!! AAAATATTAAAATAATTAAA+AGG + chr8_2:4989889-4989908 Msa1229300:intron 0.0%
!!! TTTTATTTTTGTTTTTCTAA+TGG + chr8_2:4988005-4988024 Msa1229300:intron 10.0%
!! AAGAGTAAAAAAAAAAAAAA+AGG - chr8_2:4988049-4988068 None:intergenic 10.0%
!!! TTTTTTTTTTTTTTTACTCT+TGG + chr8_2:4988048-4988067 Msa1229300:intron 10.0%
!!! CTAAGTAAAAATAATAATTT+TGG - chr8_2:4989755-4989774 None:intergenic 10.0%
!!! TGTTATTTTTGTTATTTATA+GGG - chr8_2:4991170-4991189 None:intergenic 10.0%
!!! TTGTTATTTTTGTTATTTAT+AGG - chr8_2:4991171-4991190 None:intergenic 10.0%
!! TTATTAATAATCAAGAATAA+TGG + chr8_2:4991541-4991560 Msa1229300:exon 10.0%
!!! AAAATTCACTATATTTTTAA+CGG - chr8_2:4991823-4991842 None:intergenic 10.0%
!!! TTTTATTTTTGTTTTTCTAA+TGG + chr8_2:4988005-4988024 Msa1229300:intron 10.0%
!! AAGAGTAAAAAAAAAAAAAA+AGG - chr8_2:4988049-4988068 None:intergenic 10.0%
!!! TTTTTTTTTTTTTTTACTCT+TGG + chr8_2:4988048-4988067 Msa1229300:intron 10.0%
!!! CTAAGTAAAAATAATAATTT+TGG - chr8_2:4989755-4989774 None:intergenic 10.0%
!!! TGTTATTTTTGTTATTTATA+GGG - chr8_2:4991170-4991189 None:intergenic 10.0%
!!! TTGTTATTTTTGTTATTTAT+AGG - chr8_2:4991171-4991190 None:intergenic 10.0%
!! TTATTAATAATCAAGAATAA+TGG + chr8_2:4991541-4991560 Msa1229300:exon 10.0%
!!! AAAATTCACTATATTTTTAA+CGG - chr8_2:4991823-4991842 None:intergenic 10.0%
!! ATATGTTTGATTCAAATTAA+AGG - chr8_2:4987856-4987875 None:intergenic 15.0%
!!! AAATATAATCAACTTCTTTT+TGG + chr8_2:4988385-4988404 Msa1229300:intron 15.0%
!!! AATCCAATATAACTTTTTTT+AGG + chr8_2:4988420-4988439 Msa1229300:intron 15.0%
!!! ATCCAATATAACTTTTTTTA+GGG + chr8_2:4988421-4988440 Msa1229300:intron 15.0%
!!! ATCACAATATTTTAATTCTA+TGG - chr8_2:4988541-4988560 None:intergenic 15.0%
!! ATAGAATTAAAATATTGTGA+TGG + chr8_2:4988540-4988559 Msa1229300:intron 15.0%
!!! TTAATTTTGTTAACAATACT+TGG - chr8_2:4989031-4989050 None:intergenic 15.0%
!! AAATAACAATGAATTAACAT+TGG + chr8_2:4989423-4989442 Msa1229300:CDS 15.0%
!!! TTTTATTTTTTGAAAAGGTT+TGG + chr8_2:4989638-4989657 Msa1229300:intron 15.0%
!!! AATTTTTCAATTTCAACTAT+AGG - chr8_2:4990215-4990234 None:intergenic 15.0%
!! AAAAGAAATCAAAAGTTAAT+GGG - chr8_2:4990423-4990442 None:intergenic 15.0%
!! AAAAAGAAATCAAAAGTTAA+TGG - chr8_2:4990424-4990443 None:intergenic 15.0%
!!! ATATACAAGAATTTTCTTTA+AGG + chr8_2:4990618-4990637 Msa1229300:CDS 15.0%
!!! AATTTTCTTTAAGGTATTTA+GGG + chr8_2:4990627-4990646 Msa1229300:CDS 15.0%
!! TAACAAAAATAACAAAATCA+TGG + chr8_2:4991176-4991195 Msa1229300:intron 15.0%
!! ATATGTTTGATTCAAATTAA+AGG - chr8_2:4987856-4987875 None:intergenic 15.0%
!!! AAATATAATCAACTTCTTTT+TGG + chr8_2:4988385-4988404 Msa1229300:intron 15.0%
!!! AATCCAATATAACTTTTTTT+AGG + chr8_2:4988420-4988439 Msa1229300:intron 15.0%
!!! ATCCAATATAACTTTTTTTA+GGG + chr8_2:4988421-4988440 Msa1229300:intron 15.0%
!!! ATCACAATATTTTAATTCTA+TGG - chr8_2:4988541-4988560 None:intergenic 15.0%
!! ATAGAATTAAAATATTGTGA+TGG + chr8_2:4988540-4988559 Msa1229300:intron 15.0%
!!! TTAATTTTGTTAACAATACT+TGG - chr8_2:4989031-4989050 None:intergenic 15.0%
!! AAATAACAATGAATTAACAT+TGG + chr8_2:4989423-4989442 Msa1229300:CDS 15.0%
!!! TTTTATTTTTTGAAAAGGTT+TGG + chr8_2:4989638-4989657 Msa1229300:intron 15.0%
!!! AATTTTTCAATTTCAACTAT+AGG - chr8_2:4990215-4990234 None:intergenic 15.0%
!! AAAAGAAATCAAAAGTTAAT+GGG - chr8_2:4990423-4990442 None:intergenic 15.0%
!! AAAAAGAAATCAAAAGTTAA+TGG - chr8_2:4990424-4990443 None:intergenic 15.0%
!!! ATATACAAGAATTTTCTTTA+AGG + chr8_2:4990618-4990637 Msa1229300:CDS 15.0%
!!! AATTTTCTTTAAGGTATTTA+GGG + chr8_2:4990627-4990646 Msa1229300:CDS 15.0%
!! TAACAAAAATAACAAAATCA+TGG + chr8_2:4991176-4991195 Msa1229300:intron 15.0%
!! AATAAAAGAATCAAAGAATG+TGG - chr8_2:4987992-4988011 None:intergenic 20.0%
!! ATGCAATCAAATTATTACAA+AGG + chr8_2:4988331-4988350 Msa1229300:intron 20.0%
!!! TCCAATATAACTTTTTTTAG+GGG + chr8_2:4988422-4988441 Msa1229300:intron 20.0%
!!! ATTTTTTTGGCTGAATAAAA+AGG - chr8_2:4989205-4989224 None:intergenic 20.0%
!!! TTTTATTCAGCCAAAAAAAT+TGG + chr8_2:4989205-4989224 Msa1229300:CDS 20.0%
!!! TTGGTTTTAAGATATGATTA+TGG + chr8_2:4989442-4989461 Msa1229300:CDS 20.0%
!! TTACGATGTTATTACAATTA+GGG - chr8_2:4989962-4989981 None:intergenic 20.0%
!! ATTACGATGTTATTACAATT+AGG - chr8_2:4989963-4989982 None:intergenic 20.0%
!! ATAATTGGTTAGATGTTATA+TGG - chr8_2:4990096-4990115 None:intergenic 20.0%
!! TATAACATCTAACCAATTAT+TGG + chr8_2:4990096-4990115 Msa1229300:intron 20.0%
!!! CTTTGGAGTTAAATTTAATA+GGG - chr8_2:4990247-4990266 None:intergenic 20.0%
!!! ACTTTGGAGTTAAATTTAAT+AGG - chr8_2:4990248-4990267 None:intergenic 20.0%
!!! GAATTTTCTTTAAGGTATTT+AGG + chr8_2:4990626-4990645 Msa1229300:CDS 20.0%
!! TAACAAAGTTAGAAAATATG+TGG + chr8_2:4990945-4990964 Msa1229300:intron 20.0%
!! AATAAAAGAATCAAAGAATG+TGG - chr8_2:4987992-4988011 None:intergenic 20.0%
!! ATGCAATCAAATTATTACAA+AGG + chr8_2:4988331-4988350 Msa1229300:intron 20.0%
!!! TCCAATATAACTTTTTTTAG+GGG + chr8_2:4988422-4988441 Msa1229300:intron 20.0%
!!! ATTTTTTTGGCTGAATAAAA+AGG - chr8_2:4989205-4989224 None:intergenic 20.0%
!!! TTTTATTCAGCCAAAAAAAT+TGG + chr8_2:4989205-4989224 Msa1229300:CDS 20.0%
!!! TTGGTTTTAAGATATGATTA+TGG + chr8_2:4989442-4989461 Msa1229300:CDS 20.0%
!! TTACGATGTTATTACAATTA+GGG - chr8_2:4989962-4989981 None:intergenic 20.0%
!! ATTACGATGTTATTACAATT+AGG - chr8_2:4989963-4989982 None:intergenic 20.0%
!! ATAATTGGTTAGATGTTATA+TGG - chr8_2:4990096-4990115 None:intergenic 20.0%
!! TATAACATCTAACCAATTAT+TGG + chr8_2:4990096-4990115 Msa1229300:intron 20.0%
!!! CTTTGGAGTTAAATTTAATA+GGG - chr8_2:4990247-4990266 None:intergenic 20.0%
!!! ACTTTGGAGTTAAATTTAAT+AGG - chr8_2:4990248-4990267 None:intergenic 20.0%
!!! GAATTTTCTTTAAGGTATTT+AGG + chr8_2:4990626-4990645 Msa1229300:CDS 20.0%
!! TAACAAAGTTAGAAAATATG+TGG + chr8_2:4990945-4990964 Msa1229300:intron 20.0%
!! TTTTCCTTCATTATTCTCTA+TGG + chr8_2:4987789-4987808 Msa1229300:CDS 25.0%
! TATGAGTCTAACAACATTAA+AGG - chr8_2:4987968-4987987 None:intergenic 25.0%
!!! TTTTGCTATTTTCACCAAAA+GGG + chr8_2:4988134-4988153 Msa1229300:intron 25.0%
! TCCCCTAAAAAAAGTTATAT+TGG - chr8_2:4988426-4988445 None:intergenic 25.0%
! GACTCATTCAATTAATGATT+TGG + chr8_2:4988444-4988463 Msa1229300:intron 25.0%
! GTGTATATATAGCTAATCTA+GGG - chr8_2:4988613-4988632 None:intergenic 25.0%
! AGTGTATATATAGCTAATCT+AGG - chr8_2:4988614-4988633 None:intergenic 25.0%
! TTTCAAAAGATCTAGTGAAT+TGG + chr8_2:4988789-4988808 Msa1229300:CDS 25.0%
!!! GTATAGCTAAATTTTGAGTT+TGG - chr8_2:4988943-4988962 None:intergenic 25.0%
! ATTGTACTATTAATCAACAC+TGG - chr8_2:4989256-4989275 None:intergenic 25.0%
!!! GTGTTGATTAATAGTACAAT+TGG + chr8_2:4989256-4989275 Msa1229300:CDS 25.0%
! TAGTATTAGATATGTGCTTA+AGG + chr8_2:4989309-4989328 Msa1229300:CDS 25.0%
!!! TCACATGATTGTTATTTGAT+TGG + chr8_2:4989349-4989368 Msa1229300:CDS 25.0%
! GACATGTTTATTCCTAAAAA+GGG + chr8_2:4989391-4989410 Msa1229300:CDS 25.0%
!! AAAAAAGAGAAGAGTCTTAT+GGG + chr8_2:4989501-4989520 Msa1229300:CDS 25.0%
! TAATGAATCTTCAATTCAAG+AGG + chr8_2:4989531-4989550 Msa1229300:CDS 25.0%
!!! AAGGACGTTATTTTATTGTT+TGG + chr8_2:4989908-4989927 Msa1229300:intron 25.0%
! ATAATTAAAACATATGCCCT+AGG + chr8_2:4990055-4990074 Msa1229300:intron 25.0%
! CAATAACTGAAACCAATAAT+TGG - chr8_2:4990111-4990130 None:intergenic 25.0%
!! ATTTAACTCCAAAGTGTTAA+AGG + chr8_2:4990253-4990272 Msa1229300:CDS 25.0%
!! TTTAACTCCAAAGTGTTAAA+GGG + chr8_2:4990254-4990273 Msa1229300:CDS 25.0%
!!! AACTTTTGATTTCTTTTTGC+AGG + chr8_2:4990426-4990445 Msa1229300:intron 25.0%
! TTTCATTACATAGATGTTGA+GGG - chr8_2:4990525-4990544 None:intergenic 25.0%
!! TTTTCATTACATAGATGTTG+AGG - chr8_2:4990526-4990545 None:intergenic 25.0%
! CAACATCTATGTAATGAAAA+TGG + chr8_2:4990526-4990545 Msa1229300:CDS 25.0%
! AAAATGGTGCAAAAGTTAAA+GGG + chr8_2:4990542-4990561 Msa1229300:CDS 25.0%
!! AATTTGATGGATAATGAAAG+AGG - chr8_2:4990710-4990729 None:intergenic 25.0%
! TTAAAATTGACACTTTGGTT+TGG - chr8_2:4990737-4990756 None:intergenic 25.0%
! AAATCATGGAAACTAAGAAA+TGG + chr8_2:4991190-4991209 Msa1229300:intron 25.0%
! ATCATTCTATAACATGATGT+GGG + chr8_2:4991262-4991281 Msa1229300:intron 25.0%
!! GTCAATGTTAATCCTTTTAT+TGG + chr8_2:4991666-4991685 Msa1229300:three_prime_UTR 25.0%
!! TGTTTTCAAATGCCAATAAA+AGG - chr8_2:4991681-4991700 None:intergenic 25.0%
!! TTTTCCTTCATTATTCTCTA+TGG + chr8_2:4987789-4987808 Msa1229300:CDS 25.0%
! TATGAGTCTAACAACATTAA+AGG - chr8_2:4987968-4987987 None:intergenic 25.0%
!!! TTTTGCTATTTTCACCAAAA+GGG + chr8_2:4988134-4988153 Msa1229300:intron 25.0%
! TCCCCTAAAAAAAGTTATAT+TGG - chr8_2:4988426-4988445 None:intergenic 25.0%
! GACTCATTCAATTAATGATT+TGG + chr8_2:4988444-4988463 Msa1229300:intron 25.0%
! GTGTATATATAGCTAATCTA+GGG - chr8_2:4988613-4988632 None:intergenic 25.0%
! AGTGTATATATAGCTAATCT+AGG - chr8_2:4988614-4988633 None:intergenic 25.0%
! TTTCAAAAGATCTAGTGAAT+TGG + chr8_2:4988789-4988808 Msa1229300:CDS 25.0%
!!! GTATAGCTAAATTTTGAGTT+TGG - chr8_2:4988943-4988962 None:intergenic 25.0%
! ATTGTACTATTAATCAACAC+TGG - chr8_2:4989256-4989275 None:intergenic 25.0%
!!! GTGTTGATTAATAGTACAAT+TGG + chr8_2:4989256-4989275 Msa1229300:CDS 25.0%
! TAGTATTAGATATGTGCTTA+AGG + chr8_2:4989309-4989328 Msa1229300:CDS 25.0%
!!! TCACATGATTGTTATTTGAT+TGG + chr8_2:4989349-4989368 Msa1229300:CDS 25.0%
! GACATGTTTATTCCTAAAAA+GGG + chr8_2:4989391-4989410 Msa1229300:CDS 25.0%
!! AAAAAAGAGAAGAGTCTTAT+GGG + chr8_2:4989501-4989520 Msa1229300:CDS 25.0%
! TAATGAATCTTCAATTCAAG+AGG + chr8_2:4989531-4989550 Msa1229300:CDS 25.0%
!!! AAGGACGTTATTTTATTGTT+TGG + chr8_2:4989908-4989927 Msa1229300:intron 25.0%
! ATAATTAAAACATATGCCCT+AGG + chr8_2:4990055-4990074 Msa1229300:intron 25.0%
! CAATAACTGAAACCAATAAT+TGG - chr8_2:4990111-4990130 None:intergenic 25.0%
!! ATTTAACTCCAAAGTGTTAA+AGG + chr8_2:4990253-4990272 Msa1229300:CDS 25.0%
!! TTTAACTCCAAAGTGTTAAA+GGG + chr8_2:4990254-4990273 Msa1229300:CDS 25.0%
!!! AACTTTTGATTTCTTTTTGC+AGG + chr8_2:4990426-4990445 Msa1229300:intron 25.0%
! TTTCATTACATAGATGTTGA+GGG - chr8_2:4990525-4990544 None:intergenic 25.0%
!! TTTTCATTACATAGATGTTG+AGG - chr8_2:4990526-4990545 None:intergenic 25.0%
! CAACATCTATGTAATGAAAA+TGG + chr8_2:4990526-4990545 Msa1229300:CDS 25.0%
! AAAATGGTGCAAAAGTTAAA+GGG + chr8_2:4990542-4990561 Msa1229300:CDS 25.0%
!! AATTTGATGGATAATGAAAG+AGG - chr8_2:4990710-4990729 None:intergenic 25.0%
! TTAAAATTGACACTTTGGTT+TGG - chr8_2:4990737-4990756 None:intergenic 25.0%
! AAATCATGGAAACTAAGAAA+TGG + chr8_2:4991190-4991209 Msa1229300:intron 25.0%
! ATCATTCTATAACATGATGT+GGG + chr8_2:4991262-4991281 Msa1229300:intron 25.0%
!! GTCAATGTTAATCCTTTTAT+TGG + chr8_2:4991666-4991685 Msa1229300:three_prime_UTR 25.0%
!! TGTTTTCAAATGCCAATAAA+AGG - chr8_2:4991681-4991700 None:intergenic 25.0%
AACACCATAGAGAATAATGA+AGG - chr8_2:4987796-4987815 None:intergenic 30.0%
AATACCATTCATCCAATTCT+TGG - chr8_2:4987904-4987923 None:intergenic 30.0%
!!! CTTTTGCTATTTTCACCAAA+AGG + chr8_2:4988133-4988152 Msa1229300:intron 30.0%
!!! TTTGCTATTTTCACCAAAAG+GGG + chr8_2:4988135-4988154 Msa1229300:intron 30.0%
! CAAATTCATTTAACCCCTTT+TGG - chr8_2:4988151-4988170 None:intergenic 30.0%
TTATGTAAGTACAACCTAGT+TGG + chr8_2:4988195-4988214 Msa1229300:intron 30.0%
CACGCACTTTAAATAAAAGT+AGG - chr8_2:4988268-4988287 None:intergenic 30.0%
!!! AATTTTGAGTTTGGTGTTGA+TGG - chr8_2:4988934-4988953 None:intergenic 30.0%
TTATCCATTCCCTAAGAAAT+GGG - chr8_2:4988982-4989001 None:intergenic 30.0%
TTTATCCATTCCCTAAGAAA+TGG - chr8_2:4988983-4989002 None:intergenic 30.0%
CAATACTTGGCAACATAATA+GGG - chr8_2:4989018-4989037 None:intergenic 30.0%
ACAATACTTGGCAACATAAT+AGG - chr8_2:4989019-4989038 None:intergenic 30.0%
! TTCCTTTATTGTCCTTTTGT+TGG - chr8_2:4989129-4989148 None:intergenic 30.0%
AGCCAAAAAAATTGGAATGT+TGG + chr8_2:4989213-4989232 Msa1229300:CDS 30.0%
!!! CTCCAACATTCCAATTTTTT+TGG - chr8_2:4989218-4989237 None:intergenic 30.0%
ATCAACACTGGAAAAAAATC+AGG - chr8_2:4989244-4989263 None:intergenic 30.0%
GGACATGTTTATTCCTAAAA+AGG + chr8_2:4989390-4989409 Msa1229300:CDS 30.0%
! TTTTGCTCAAATCCCTTTTT+AGG - chr8_2:4989406-4989425 None:intergenic 30.0%
CAAAAAAGAGAAGAGTCTTA+TGG + chr8_2:4989500-4989519 Msa1229300:CDS 30.0%
! AAAAAGAGAAGAGTCTTATG+GGG + chr8_2:4989502-4989521 Msa1229300:CDS 30.0%
TAGTTTGATGAATTGTAGTC+AGG + chr8_2:4989669-4989688 Msa1229300:intron 30.0%
AGTTTGATGAATTGTAGTCA+GGG + chr8_2:4989670-4989689 Msa1229300:intron 30.0%
CCTAGGATACCATTAATTTA+GGG + chr8_2:4989725-4989744 Msa1229300:intron 30.0%
CTAGGATACCATTAATTTAG+GGG + chr8_2:4989726-4989745 Msa1229300:intron 30.0%
!!! CCTAAGATTTTTGGTGTTTT+GGG - chr8_2:4989934-4989953 None:intergenic 30.0%
!!! TCCTAAGATTTTTGGTGTTT+TGG - chr8_2:4989935-4989954 None:intergenic 30.0%
GATGTTATTACAATTAGGGT+CGG - chr8_2:4989958-4989977 None:intergenic 30.0%
ACTCGTATACATAAATTTGC+AGG + chr8_2:4990136-4990155 Msa1229300:intron 30.0%
CTCGTATACATAAATTTGCA+GGG + chr8_2:4990137-4990156 Msa1229300:intron 30.0%
TCGTATACATAAATTTGCAG+GGG + chr8_2:4990138-4990157 Msa1229300:intron 30.0%
GGAGTTAAATTTAATAGGGT+TGG - chr8_2:4990243-4990262 None:intergenic 30.0%
TGAAGTGAATGAACTTGAAA+AGG + chr8_2:4990468-4990487 Msa1229300:CDS 30.0%
GAAAATGGTGCAAAAGTTAA+AGG + chr8_2:4990541-4990560 Msa1229300:CDS 30.0%
AAATGGTGCAAAAGTTAAAG+GGG + chr8_2:4990543-4990562 Msa1229300:CDS 30.0%
!! ACCATTTGGTTTACTAGTTT+TGG + chr8_2:4990576-4990595 Msa1229300:CDS 30.0%
!!! TTTACTAGTTTTGGCTTCAA+AGG + chr8_2:4990585-4990604 Msa1229300:CDS 30.0%
!! TTGGTTTGGTAAGAATTTGA+TGG - chr8_2:4990723-4990742 None:intergenic 30.0%
GTTGCTTAAAATTGACACTT+TGG - chr8_2:4990742-4990761 None:intergenic 30.0%
ATAAGATGAACTTGCAAAAG+TGG + chr8_2:4990897-4990916 Msa1229300:intron 30.0%
TCTAACTTTGTTAATACCTC+AGG - chr8_2:4990938-4990957 None:intergenic 30.0%
GTCGTTGGATTAAAAATATG+TGG + chr8_2:4990967-4990986 Msa1229300:intron 30.0%
GATTAAAAATATGTGGTCGT+TGG + chr8_2:4990974-4990993 Msa1229300:intron 30.0%
GATCATTCTATAACATGATG+TGG + chr8_2:4991261-4991280 Msa1229300:intron 30.0%
ATCTATCTGTGAGAAATAGA+GGG - chr8_2:4991342-4991361 None:intergenic 30.0%
TATCTATCTGTGAGAAATAG+AGG - chr8_2:4991343-4991362 None:intergenic 30.0%
AAAAGGAAAAACATGCATCA+CGG + chr8_2:4991388-4991407 Msa1229300:CDS 30.0%
TTCCATTATTGAATGCATGA+AGG - chr8_2:4991454-4991473 None:intergenic 30.0%
TAGTAACATGTTTCCATCAA+CGG - chr8_2:4991615-4991634 None:intergenic 30.0%
AAGATGATGTAGTTGTGTTA+GGG + chr8_2:4991735-4991754 Msa1229300:three_prime_UTR 30.0%
AACACCATAGAGAATAATGA+AGG - chr8_2:4987796-4987815 None:intergenic 30.0%
AATACCATTCATCCAATTCT+TGG - chr8_2:4987904-4987923 None:intergenic 30.0%
!!! CTTTTGCTATTTTCACCAAA+AGG + chr8_2:4988133-4988152 Msa1229300:intron 30.0%
!!! TTTGCTATTTTCACCAAAAG+GGG + chr8_2:4988135-4988154 Msa1229300:intron 30.0%
! CAAATTCATTTAACCCCTTT+TGG - chr8_2:4988151-4988170 None:intergenic 30.0%
TTATGTAAGTACAACCTAGT+TGG + chr8_2:4988195-4988214 Msa1229300:intron 30.0%
CACGCACTTTAAATAAAAGT+AGG - chr8_2:4988268-4988287 None:intergenic 30.0%
!!! AATTTTGAGTTTGGTGTTGA+TGG - chr8_2:4988934-4988953 None:intergenic 30.0%
TTATCCATTCCCTAAGAAAT+GGG - chr8_2:4988982-4989001 None:intergenic 30.0%
TTTATCCATTCCCTAAGAAA+TGG - chr8_2:4988983-4989002 None:intergenic 30.0%
CAATACTTGGCAACATAATA+GGG - chr8_2:4989018-4989037 None:intergenic 30.0%
ACAATACTTGGCAACATAAT+AGG - chr8_2:4989019-4989038 None:intergenic 30.0%
! TTCCTTTATTGTCCTTTTGT+TGG - chr8_2:4989129-4989148 None:intergenic 30.0%
AGCCAAAAAAATTGGAATGT+TGG + chr8_2:4989213-4989232 Msa1229300:CDS 30.0%
!!! CTCCAACATTCCAATTTTTT+TGG - chr8_2:4989218-4989237 None:intergenic 30.0%
ATCAACACTGGAAAAAAATC+AGG - chr8_2:4989244-4989263 None:intergenic 30.0%
GGACATGTTTATTCCTAAAA+AGG + chr8_2:4989390-4989409 Msa1229300:CDS 30.0%
! TTTTGCTCAAATCCCTTTTT+AGG - chr8_2:4989406-4989425 None:intergenic 30.0%
CAAAAAAGAGAAGAGTCTTA+TGG + chr8_2:4989500-4989519 Msa1229300:CDS 30.0%
! AAAAAGAGAAGAGTCTTATG+GGG + chr8_2:4989502-4989521 Msa1229300:CDS 30.0%
TAGTTTGATGAATTGTAGTC+AGG + chr8_2:4989669-4989688 Msa1229300:intron 30.0%
AGTTTGATGAATTGTAGTCA+GGG + chr8_2:4989670-4989689 Msa1229300:intron 30.0%
CCTAGGATACCATTAATTTA+GGG + chr8_2:4989725-4989744 Msa1229300:intron 30.0%
CTAGGATACCATTAATTTAG+GGG + chr8_2:4989726-4989745 Msa1229300:intron 30.0%
!!! CCTAAGATTTTTGGTGTTTT+GGG - chr8_2:4989934-4989953 None:intergenic 30.0%
!!! TCCTAAGATTTTTGGTGTTT+TGG - chr8_2:4989935-4989954 None:intergenic 30.0%
GATGTTATTACAATTAGGGT+CGG - chr8_2:4989958-4989977 None:intergenic 30.0%
ACTCGTATACATAAATTTGC+AGG + chr8_2:4990136-4990155 Msa1229300:intron 30.0%
CTCGTATACATAAATTTGCA+GGG + chr8_2:4990137-4990156 Msa1229300:intron 30.0%
TCGTATACATAAATTTGCAG+GGG + chr8_2:4990138-4990157 Msa1229300:intron 30.0%
GGAGTTAAATTTAATAGGGT+TGG - chr8_2:4990243-4990262 None:intergenic 30.0%
TGAAGTGAATGAACTTGAAA+AGG + chr8_2:4990468-4990487 Msa1229300:CDS 30.0%
GAAAATGGTGCAAAAGTTAA+AGG + chr8_2:4990541-4990560 Msa1229300:CDS 30.0%
AAATGGTGCAAAAGTTAAAG+GGG + chr8_2:4990543-4990562 Msa1229300:CDS 30.0%
!! ACCATTTGGTTTACTAGTTT+TGG + chr8_2:4990576-4990595 Msa1229300:CDS 30.0%
!!! TTTACTAGTTTTGGCTTCAA+AGG + chr8_2:4990585-4990604 Msa1229300:CDS 30.0%
!! TTGGTTTGGTAAGAATTTGA+TGG - chr8_2:4990723-4990742 None:intergenic 30.0%
GTTGCTTAAAATTGACACTT+TGG - chr8_2:4990742-4990761 None:intergenic 30.0%
ATAAGATGAACTTGCAAAAG+TGG + chr8_2:4990897-4990916 Msa1229300:intron 30.0%
TCTAACTTTGTTAATACCTC+AGG - chr8_2:4990938-4990957 None:intergenic 30.0%
GTCGTTGGATTAAAAATATG+TGG + chr8_2:4990967-4990986 Msa1229300:intron 30.0%
GATTAAAAATATGTGGTCGT+TGG + chr8_2:4990974-4990993 Msa1229300:intron 30.0%
GATCATTCTATAACATGATG+TGG + chr8_2:4991261-4991280 Msa1229300:intron 30.0%
ATCTATCTGTGAGAAATAGA+GGG - chr8_2:4991342-4991361 None:intergenic 30.0%
TATCTATCTGTGAGAAATAG+AGG - chr8_2:4991343-4991362 None:intergenic 30.0%
AAAAGGAAAAACATGCATCA+CGG + chr8_2:4991388-4991407 Msa1229300:CDS 30.0%
TTCCATTATTGAATGCATGA+AGG - chr8_2:4991454-4991473 None:intergenic 30.0%
TAGTAACATGTTTCCATCAA+CGG - chr8_2:4991615-4991634 None:intergenic 30.0%
AAGATGATGTAGTTGTGTTA+GGG + chr8_2:4991735-4991754 Msa1229300:three_prime_UTR 30.0%
AGGTAGAAGAATGAGTTTGA+TGG - chr8_2:4987836-4987855 None:intergenic 35.0%
GAGTCTAACAACATTAAAGG+AGG - chr8_2:4987965-4987984 None:intergenic 35.0%
! TTTTTACTCTTGGCGTGATA+TGG + chr8_2:4988058-4988077 Msa1229300:intron 35.0%
CAAGAGTAGAACTAACCATT+AGG - chr8_2:4988102-4988121 None:intergenic 35.0%
ATTAGGTCCTATGAGATACA+AGG + chr8_2:4988688-4988707 Msa1229300:intron 35.0%
TTAGGTCCTATGAGATACAA+GGG + chr8_2:4988689-4988708 Msa1229300:intron 35.0%
TATAGTCCCTTGTATCTCAT+AGG - chr8_2:4988698-4988717 None:intergenic 35.0%
! GGTTGTGTTGGTAGAAAATA+TGG - chr8_2:4988721-4988740 None:intergenic 35.0%
GAGCAACAATAGCATTGTTT+GGG + chr8_2:4988757-4988776 Msa1229300:CDS 35.0%
AGCAACAATAGCATTGTTTG+GGG + chr8_2:4988758-4988777 Msa1229300:CDS 35.0%
TGATGTCATATGGTTGAGAA+GGG - chr8_2:4988838-4988857 None:intergenic 35.0%
TTGATGTCATATGGTTGAGA+AGG - chr8_2:4988839-4988858 None:intergenic 35.0%
TCTCAACCATATGACATCAA+TGG + chr8_2:4988839-4988858 Msa1229300:CDS 35.0%
CAACAACCATTGATGTCATA+TGG - chr8_2:4988848-4988867 None:intergenic 35.0%
CATATGACATCAATGGTTGT+TGG + chr8_2:4988846-4988865 Msa1229300:CDS 35.0%
TTTGTCATTCGAGAGAAATG+TGG - chr8_2:4988882-4988901 None:intergenic 35.0%
AAACCAACCATCTTATACAC+AGG + chr8_2:4988899-4988918 Msa1229300:CDS 35.0%
ATTCCTGTGTATAAGATGGT+TGG - chr8_2:4988905-4988924 None:intergenic 35.0%
GTCAATTCCTGTGTATAAGA+TGG - chr8_2:4988909-4988928 None:intergenic 35.0%
! AATGGGTCAGACACATTTTT+GGG - chr8_2:4988965-4988984 None:intergenic 35.0%
! AAATGGGTCAGACACATTTT+TGG - chr8_2:4988966-4988985 None:intergenic 35.0%
AGCCAACAAAAGGACAATAA+AGG + chr8_2:4989124-4989143 Msa1229300:CDS 35.0%
TGGTAGTTATGACACAATCA+AGG + chr8_2:4989369-4989388 Msa1229300:CDS 35.0%
CAAGAGGATGATGTACAAAA+AGG + chr8_2:4989547-4989566 Msa1229300:CDS 35.0%
AGGATGATGTACAAAAAGGA+TGG + chr8_2:4989551-4989570 Msa1229300:CDS 35.0%
GTTTGATGAATTGTAGTCAG+GGG + chr8_2:4989671-4989690 Msa1229300:intron 35.0%
GCCTAGGATACCATTAATTT+AGG + chr8_2:4989724-4989743 Msa1229300:intron 35.0%
CCCTAAATTAATGGTATCCT+AGG - chr8_2:4989728-4989747 None:intergenic 35.0%
TTTGGTTGCCCCTAAATTAA+TGG - chr8_2:4989737-4989756 None:intergenic 35.0%
CCCAAAACACCAAAAATCTT+AGG + chr8_2:4989931-4989950 Msa1229300:intron 35.0%
GCAAAACAAAAATCACACAC+TGG - chr8_2:4990327-4990346 None:intergenic 35.0%
ATTAGACCCTAGTTGGAAAA+TGG + chr8_2:4990498-4990517 Msa1229300:CDS 35.0%
AAAGTTAAAGGGGTAGGATT+AGG + chr8_2:4990553-4990572 Msa1229300:CDS 35.0%
GCCAAAACTAGTAAACCAAA+TGG - chr8_2:4990580-4990599 None:intergenic 35.0%
GCAACTTATGTATCATCACT+AGG + chr8_2:4990757-4990776 Msa1229300:intron 35.0%
AAGAACGATTTGACCACTTA+TGG + chr8_2:4990795-4990814 Msa1229300:CDS 35.0%
GTATATGCTATTACAACCTG+AGG + chr8_2:4990919-4990938 Msa1229300:intron 35.0%
GTTAGAAAATATGTGGTCGT+TGG + chr8_2:4990952-4990971 Msa1229300:intron 35.0%
ACAGATAGATAACTCAGTAG+TGG + chr8_2:4991352-4991371 Msa1229300:intron 35.0%
! TTATCATTGATTGCCAACGT+TGG - chr8_2:4991425-4991444 None:intergenic 35.0%
CACCTTCATGCATTCAATAA+TGG + chr8_2:4991449-4991468 Msa1229300:CDS 35.0%
GAAGATGATGTAGTTGTGTT+AGG + chr8_2:4991734-4991753 Msa1229300:three_prime_UTR 35.0%
! TGTGTTAGGGCAATTTTGAA+AGG + chr8_2:4991748-4991767 Msa1229300:three_prime_UTR 35.0%
AGGTAGAAGAATGAGTTTGA+TGG - chr8_2:4987836-4987855 None:intergenic 35.0%
GAGTCTAACAACATTAAAGG+AGG - chr8_2:4987965-4987984 None:intergenic 35.0%
! TTTTTACTCTTGGCGTGATA+TGG + chr8_2:4988058-4988077 Msa1229300:intron 35.0%
CAAGAGTAGAACTAACCATT+AGG - chr8_2:4988102-4988121 None:intergenic 35.0%
ATTAGGTCCTATGAGATACA+AGG + chr8_2:4988688-4988707 Msa1229300:intron 35.0%
TTAGGTCCTATGAGATACAA+GGG + chr8_2:4988689-4988708 Msa1229300:intron 35.0%
TATAGTCCCTTGTATCTCAT+AGG - chr8_2:4988698-4988717 None:intergenic 35.0%
! GGTTGTGTTGGTAGAAAATA+TGG - chr8_2:4988721-4988740 None:intergenic 35.0%
GAGCAACAATAGCATTGTTT+GGG + chr8_2:4988757-4988776 Msa1229300:CDS 35.0%
AGCAACAATAGCATTGTTTG+GGG + chr8_2:4988758-4988777 Msa1229300:CDS 35.0%
TGATGTCATATGGTTGAGAA+GGG - chr8_2:4988838-4988857 None:intergenic 35.0%
TTGATGTCATATGGTTGAGA+AGG - chr8_2:4988839-4988858 None:intergenic 35.0%
TCTCAACCATATGACATCAA+TGG + chr8_2:4988839-4988858 Msa1229300:CDS 35.0%
CAACAACCATTGATGTCATA+TGG - chr8_2:4988848-4988867 None:intergenic 35.0%
CATATGACATCAATGGTTGT+TGG + chr8_2:4988846-4988865 Msa1229300:CDS 35.0%
TTTGTCATTCGAGAGAAATG+TGG - chr8_2:4988882-4988901 None:intergenic 35.0%
AAACCAACCATCTTATACAC+AGG + chr8_2:4988899-4988918 Msa1229300:CDS 35.0%
ATTCCTGTGTATAAGATGGT+TGG - chr8_2:4988905-4988924 None:intergenic 35.0%
GTCAATTCCTGTGTATAAGA+TGG - chr8_2:4988909-4988928 None:intergenic 35.0%
! AATGGGTCAGACACATTTTT+GGG - chr8_2:4988965-4988984 None:intergenic 35.0%
! AAATGGGTCAGACACATTTT+TGG - chr8_2:4988966-4988985 None:intergenic 35.0%
AGCCAACAAAAGGACAATAA+AGG + chr8_2:4989124-4989143 Msa1229300:CDS 35.0%
TGGTAGTTATGACACAATCA+AGG + chr8_2:4989369-4989388 Msa1229300:CDS 35.0%
CAAGAGGATGATGTACAAAA+AGG + chr8_2:4989547-4989566 Msa1229300:CDS 35.0%
AGGATGATGTACAAAAAGGA+TGG + chr8_2:4989551-4989570 Msa1229300:CDS 35.0%
GTTTGATGAATTGTAGTCAG+GGG + chr8_2:4989671-4989690 Msa1229300:intron 35.0%
GCCTAGGATACCATTAATTT+AGG + chr8_2:4989724-4989743 Msa1229300:intron 35.0%
CCCTAAATTAATGGTATCCT+AGG - chr8_2:4989728-4989747 None:intergenic 35.0%
TTTGGTTGCCCCTAAATTAA+TGG - chr8_2:4989737-4989756 None:intergenic 35.0%
CCCAAAACACCAAAAATCTT+AGG + chr8_2:4989931-4989950 Msa1229300:intron 35.0%
GCAAAACAAAAATCACACAC+TGG - chr8_2:4990327-4990346 None:intergenic 35.0%
ATTAGACCCTAGTTGGAAAA+TGG + chr8_2:4990498-4990517 Msa1229300:CDS 35.0%
AAAGTTAAAGGGGTAGGATT+AGG + chr8_2:4990553-4990572 Msa1229300:CDS 35.0%
GCCAAAACTAGTAAACCAAA+TGG - chr8_2:4990580-4990599 None:intergenic 35.0%
GCAACTTATGTATCATCACT+AGG + chr8_2:4990757-4990776 Msa1229300:intron 35.0%
AAGAACGATTTGACCACTTA+TGG + chr8_2:4990795-4990814 Msa1229300:CDS 35.0%
GTATATGCTATTACAACCTG+AGG + chr8_2:4990919-4990938 Msa1229300:intron 35.0%
GTTAGAAAATATGTGGTCGT+TGG + chr8_2:4990952-4990971 Msa1229300:intron 35.0%
ACAGATAGATAACTCAGTAG+TGG + chr8_2:4991352-4991371 Msa1229300:intron 35.0%
! TTATCATTGATTGCCAACGT+TGG - chr8_2:4991425-4991444 None:intergenic 35.0%
CACCTTCATGCATTCAATAA+TGG + chr8_2:4991449-4991468 Msa1229300:CDS 35.0%
GAAGATGATGTAGTTGTGTT+AGG + chr8_2:4991734-4991753 Msa1229300:three_prime_UTR 35.0%
! TGTGTTAGGGCAATTTTGAA+AGG + chr8_2:4991748-4991767 Msa1229300:three_prime_UTR 35.0%
!! CATGGGAACTTCTTGGTTTT+TGG + chr8_2:4987761-4987780 Msa1229300:exon 40.0%
GAAGGTTGGAAGTGAAAAGA+AGG - chr8_2:4987882-4987901 None:intergenic 40.0%
ACTTCCAACCTTCCAAGAAT+TGG + chr8_2:4987889-4987908 Msa1229300:CDS 40.0%
TCATCCAATTCTTGGAAGGT+TGG - chr8_2:4987896-4987915 None:intergenic 40.0%
CCATTCATCCAATTCTTGGA+AGG - chr8_2:4987900-4987919 None:intergenic 40.0%
CCTTCCAAGAATTGGATGAA+TGG + chr8_2:4987897-4987916 Msa1229300:CDS 40.0%
ATTGGACTTGCAGATCCTAA+TGG + chr8_2:4988084-4988103 Msa1229300:intron 40.0%
! GCTCTTTTTGCATGTGCATT+AGG + chr8_2:4988671-4988690 Msa1229300:intron 40.0%
TTCTACCAACACAACCCAAA+AGG + chr8_2:4988725-4988744 Msa1229300:CDS 40.0%
GGAGCAACAATAGCATTGTT+TGG + chr8_2:4988756-4988775 Msa1229300:CDS 40.0%
GCAACAATAGCATTGTTTGG+GGG + chr8_2:4988759-4988778 Msa1229300:CDS 40.0%
! GGGTAAGAGCATGTTGTAAT+GGG - chr8_2:4988817-4988836 None:intergenic 40.0%
GATGTCATATGGTTGAGAAG+GGG - chr8_2:4988837-4988856 None:intergenic 40.0%
ATGTGTCTGACCCATTTCTT+AGG + chr8_2:4988969-4988988 Msa1229300:CDS 40.0%
TGTGTCTGACCCATTTCTTA+GGG + chr8_2:4988970-4988989 Msa1229300:CDS 40.0%
GGCAACATAATAGGGTTCTT+GGG - chr8_2:4989010-4989029 None:intergenic 40.0%
TGGCAACATAATAGGGTTCT+TGG - chr8_2:4989011-4989030 None:intergenic 40.0%
!! TTGGTCACCATGATGGATTA+TGG + chr8_2:4989086-4989105 Msa1229300:CDS 40.0%
!! TCACCATGATGGATTATGGA+GGG + chr8_2:4989090-4989109 Msa1229300:CDS 40.0%
! ACTTGTTGGAAGCCAACAAA+AGG + chr8_2:4989114-4989133 Msa1229300:CDS 40.0%
GATGTACAAAAAGGATGGTC+TGG + chr8_2:4989556-4989575 Msa1229300:CDS 40.0%
! AAAAGGATGGTCTGGAATTC+AGG + chr8_2:4989564-4989583 Msa1229300:CDS 40.0%
TAAATTTGCAGGGGATTCCT+AGG + chr8_2:4990147-4990166 Msa1229300:intron 40.0%
! ACTCTCTGGCTTGAAAAATC+TGG + chr8_2:4990170-4990189 Msa1229300:CDS 40.0%
! CTCTCTGGCTTGAAAAATCT+GGG + chr8_2:4990171-4990190 Msa1229300:CDS 40.0%
CAATTTCAACTATAGGCCAC+TGG - chr8_2:4990208-4990227 None:intergenic 40.0%
! AACTCCAAAGTGTTAAAGGG+AGG + chr8_2:4990257-4990276 Msa1229300:CDS 40.0%
TGTTCCTCCCTTTAACACTT+TGG - chr8_2:4990264-4990283 None:intergenic 40.0%
GGAACATTGCTTGAGATTGT+TGG + chr8_2:4990278-4990297 Msa1229300:CDS 40.0%
ATCCACAAAAGCTCCATAAG+TGG - chr8_2:4990811-4990830 None:intergenic 40.0%
! TTATGGAGCTTTTGTGGATG+TGG + chr8_2:4990812-4990831 Msa1229300:CDS 40.0%
TTGACAACTCCTCATAGACA+GGG - chr8_2:4990839-4990858 None:intergenic 40.0%
ATTGACAACTCCTCATAGAC+AGG - chr8_2:4990840-4990859 None:intergenic 40.0%
GGAGTTGTCAATAAGAAGCT+TGG + chr8_2:4990848-4990867 Msa1229300:CDS 40.0%
! AACTCAGTAGTGGAGAGTTT+CGG + chr8_2:4991362-4991381 Msa1229300:CDS 40.0%
AGATCAAGCAGTTAAGTGCT+TGG + chr8_2:4991486-4991505 Msa1229300:CDS 40.0%
!! CATGGGAACTTCTTGGTTTT+TGG + chr8_2:4987761-4987780 Msa1229300:exon 40.0%
GAAGGTTGGAAGTGAAAAGA+AGG - chr8_2:4987882-4987901 None:intergenic 40.0%
ACTTCCAACCTTCCAAGAAT+TGG + chr8_2:4987889-4987908 Msa1229300:CDS 40.0%
TCATCCAATTCTTGGAAGGT+TGG - chr8_2:4987896-4987915 None:intergenic 40.0%
CCATTCATCCAATTCTTGGA+AGG - chr8_2:4987900-4987919 None:intergenic 40.0%
CCTTCCAAGAATTGGATGAA+TGG + chr8_2:4987897-4987916 Msa1229300:CDS 40.0%
ATTGGACTTGCAGATCCTAA+TGG + chr8_2:4988084-4988103 Msa1229300:intron 40.0%
! GCTCTTTTTGCATGTGCATT+AGG + chr8_2:4988671-4988690 Msa1229300:intron 40.0%
TTCTACCAACACAACCCAAA+AGG + chr8_2:4988725-4988744 Msa1229300:CDS 40.0%
GGAGCAACAATAGCATTGTT+TGG + chr8_2:4988756-4988775 Msa1229300:CDS 40.0%
GCAACAATAGCATTGTTTGG+GGG + chr8_2:4988759-4988778 Msa1229300:CDS 40.0%
! GGGTAAGAGCATGTTGTAAT+GGG - chr8_2:4988817-4988836 None:intergenic 40.0%
GATGTCATATGGTTGAGAAG+GGG - chr8_2:4988837-4988856 None:intergenic 40.0%
ATGTGTCTGACCCATTTCTT+AGG + chr8_2:4988969-4988988 Msa1229300:CDS 40.0%
TGTGTCTGACCCATTTCTTA+GGG + chr8_2:4988970-4988989 Msa1229300:CDS 40.0%
GGCAACATAATAGGGTTCTT+GGG - chr8_2:4989010-4989029 None:intergenic 40.0%
TGGCAACATAATAGGGTTCT+TGG - chr8_2:4989011-4989030 None:intergenic 40.0%
!! TTGGTCACCATGATGGATTA+TGG + chr8_2:4989086-4989105 Msa1229300:CDS 40.0%
!! TCACCATGATGGATTATGGA+GGG + chr8_2:4989090-4989109 Msa1229300:CDS 40.0%
! ACTTGTTGGAAGCCAACAAA+AGG + chr8_2:4989114-4989133 Msa1229300:CDS 40.0%
GATGTACAAAAAGGATGGTC+TGG + chr8_2:4989556-4989575 Msa1229300:CDS 40.0%
! AAAAGGATGGTCTGGAATTC+AGG + chr8_2:4989564-4989583 Msa1229300:CDS 40.0%
TAAATTTGCAGGGGATTCCT+AGG + chr8_2:4990147-4990166 Msa1229300:intron 40.0%
! ACTCTCTGGCTTGAAAAATC+TGG + chr8_2:4990170-4990189 Msa1229300:CDS 40.0%
! CTCTCTGGCTTGAAAAATCT+GGG + chr8_2:4990171-4990190 Msa1229300:CDS 40.0%
CAATTTCAACTATAGGCCAC+TGG - chr8_2:4990208-4990227 None:intergenic 40.0%
! AACTCCAAAGTGTTAAAGGG+AGG + chr8_2:4990257-4990276 Msa1229300:CDS 40.0%
TGTTCCTCCCTTTAACACTT+TGG - chr8_2:4990264-4990283 None:intergenic 40.0%
GGAACATTGCTTGAGATTGT+TGG + chr8_2:4990278-4990297 Msa1229300:CDS 40.0%
ATCCACAAAAGCTCCATAAG+TGG - chr8_2:4990811-4990830 None:intergenic 40.0%
! TTATGGAGCTTTTGTGGATG+TGG + chr8_2:4990812-4990831 Msa1229300:CDS 40.0%
TTGACAACTCCTCATAGACA+GGG - chr8_2:4990839-4990858 None:intergenic 40.0%
ATTGACAACTCCTCATAGAC+AGG - chr8_2:4990840-4990859 None:intergenic 40.0%
GGAGTTGTCAATAAGAAGCT+TGG + chr8_2:4990848-4990867 Msa1229300:CDS 40.0%
! AACTCAGTAGTGGAGAGTTT+CGG + chr8_2:4991362-4991381 Msa1229300:CDS 40.0%
AGATCAAGCAGTTAAGTGCT+TGG + chr8_2:4991486-4991505 Msa1229300:CDS 40.0%
TTACTCTTGGCGTGATATGG+TGG + chr8_2:4988061-4988080 Msa1229300:intron 45.0%
!! ACAACCTAGTTGGTAGACGT+AGG + chr8_2:4988205-4988224 Msa1229300:intron 45.0%
!! CAACCTAGTTGGTAGACGTA+GGG + chr8_2:4988206-4988225 Msa1229300:intron 45.0%
TTTCCCTACGTCTACCAACT+AGG - chr8_2:4988212-4988231 None:intergenic 45.0%
GGTAGACGTAGGGAAATTGA+CGG + chr8_2:4988216-4988235 Msa1229300:intron 45.0%
!!! TAGCACCTTTTGGGTTGTGT+TGG - chr8_2:4988733-4988752 None:intergenic 45.0%
!! ACAACCCAAAAGGTGCTACA+TGG + chr8_2:4988735-4988754 Msa1229300:CDS 45.0%
! TGCTCCATGTAGCACCTTTT+GGG - chr8_2:4988742-4988761 None:intergenic 45.0%
! TTGCTCCATGTAGCACCTTT+TGG - chr8_2:4988743-4988762 None:intergenic 45.0%
! GGGGTAAGAGCATGTTGTAA+TGG - chr8_2:4988818-4988837 None:intergenic 45.0%
GACATCAATGGTTGTTGGTC+AGG + chr8_2:4988851-4988870 Msa1229300:CDS 45.0%
CTGACCCATTTCTTAGGGAA+TGG + chr8_2:4988975-4988994 Msa1229300:CDS 45.0%
TTAGAGACCCTACAACTGCT+TGG + chr8_2:4989062-4989081 Msa1229300:CDS 45.0%
GACCAATCCAAGCAGTTGTA+GGG - chr8_2:4989072-4989091 None:intergenic 45.0%
TGACCAATCCAAGCAGTTGT+AGG - chr8_2:4989073-4989092 None:intergenic 45.0%
!! GTCACCATGATGGATTATGG+AGG + chr8_2:4989089-4989108 Msa1229300:CDS 45.0%
GTACCCTCCATAATCCATCA+TGG - chr8_2:4989096-4989115 None:intergenic 45.0%
!! GGATTATGGAGGGTACTTGT+TGG + chr8_2:4989100-4989119 Msa1229300:CDS 45.0%
! AGAGAAGAGTCTTATGGGGT+TGG + chr8_2:4989506-4989525 Msa1229300:CDS 45.0%
! AGGGTCGGTCCTAAGATTTT+TGG - chr8_2:4989943-4989962 None:intergenic 45.0%
AACATATGCCCTAGGACTCT+TGG + chr8_2:4990063-4990082 Msa1229300:intron 45.0%
!! TTTTCAAGCCAGAGAGTCCT+AGG - chr8_2:4990167-4990186 None:intergenic 45.0%
CACAAGCATTAGACCCTAGT+TGG + chr8_2:4990491-4990510 Msa1229300:CDS 45.0%
! GAGGGTCCATTTTCCAACTA+GGG - chr8_2:4990507-4990526 None:intergenic 45.0%
! TGAGGGTCCATTTTCCAACT+AGG - chr8_2:4990508-4990527 None:intergenic 45.0%
GGTGCAAAAGTTAAAGGGGT+AGG + chr8_2:4990547-4990566 Msa1229300:CDS 45.0%
TCATGTGTAGTGACCAAAGC+AGG + chr8_2:4990671-4990690 Msa1229300:CDS 45.0%
! GACCACTTATGGAGCTTTTG+TGG + chr8_2:4990806-4990825 Msa1229300:CDS 45.0%
TTCATGCCTCATCACATCAG+TGG - chr8_2:4991103-4991122 None:intergenic 45.0%
TTGCCAACGATAATCGATCC+TGG + chr8_2:4991132-4991151 Msa1229300:intron 45.0%
GAACCAGGATCGATTATCGT+TGG - chr8_2:4991138-4991157 None:intergenic 45.0%
ATAGGGACGAGAATAGAACC+AGG - chr8_2:4991153-4991172 None:intergenic 45.0%
GGCTAGAGTTTATCCAACGT+TGG + chr8_2:4991409-4991428 Msa1229300:CDS 45.0%
TCTTCTTGTCTAGCCGTTGA+TGG + chr8_2:4991599-4991618 Msa1229300:three_prime_UTR 45.0%
TTACTCTTGGCGTGATATGG+TGG + chr8_2:4988061-4988080 Msa1229300:intron 45.0%
!! ACAACCTAGTTGGTAGACGT+AGG + chr8_2:4988205-4988224 Msa1229300:intron 45.0%
!! CAACCTAGTTGGTAGACGTA+GGG + chr8_2:4988206-4988225 Msa1229300:intron 45.0%
TTTCCCTACGTCTACCAACT+AGG - chr8_2:4988212-4988231 None:intergenic 45.0%
GGTAGACGTAGGGAAATTGA+CGG + chr8_2:4988216-4988235 Msa1229300:intron 45.0%
!!! TAGCACCTTTTGGGTTGTGT+TGG - chr8_2:4988733-4988752 None:intergenic 45.0%
!! ACAACCCAAAAGGTGCTACA+TGG + chr8_2:4988735-4988754 Msa1229300:CDS 45.0%
! TGCTCCATGTAGCACCTTTT+GGG - chr8_2:4988742-4988761 None:intergenic 45.0%
! TTGCTCCATGTAGCACCTTT+TGG - chr8_2:4988743-4988762 None:intergenic 45.0%
! GGGGTAAGAGCATGTTGTAA+TGG - chr8_2:4988818-4988837 None:intergenic 45.0%
GACATCAATGGTTGTTGGTC+AGG + chr8_2:4988851-4988870 Msa1229300:CDS 45.0%
CTGACCCATTTCTTAGGGAA+TGG + chr8_2:4988975-4988994 Msa1229300:CDS 45.0%
TTAGAGACCCTACAACTGCT+TGG + chr8_2:4989062-4989081 Msa1229300:CDS 45.0%
GACCAATCCAAGCAGTTGTA+GGG - chr8_2:4989072-4989091 None:intergenic 45.0%
TGACCAATCCAAGCAGTTGT+AGG - chr8_2:4989073-4989092 None:intergenic 45.0%
!! GTCACCATGATGGATTATGG+AGG + chr8_2:4989089-4989108 Msa1229300:CDS 45.0%
GTACCCTCCATAATCCATCA+TGG - chr8_2:4989096-4989115 None:intergenic 45.0%
!! GGATTATGGAGGGTACTTGT+TGG + chr8_2:4989100-4989119 Msa1229300:CDS 45.0%
! AGAGAAGAGTCTTATGGGGT+TGG + chr8_2:4989506-4989525 Msa1229300:CDS 45.0%
! AGGGTCGGTCCTAAGATTTT+TGG - chr8_2:4989943-4989962 None:intergenic 45.0%
AACATATGCCCTAGGACTCT+TGG + chr8_2:4990063-4990082 Msa1229300:intron 45.0%
!! TTTTCAAGCCAGAGAGTCCT+AGG - chr8_2:4990167-4990186 None:intergenic 45.0%
CACAAGCATTAGACCCTAGT+TGG + chr8_2:4990491-4990510 Msa1229300:CDS 45.0%
! GAGGGTCCATTTTCCAACTA+GGG - chr8_2:4990507-4990526 None:intergenic 45.0%
! TGAGGGTCCATTTTCCAACT+AGG - chr8_2:4990508-4990527 None:intergenic 45.0%
GGTGCAAAAGTTAAAGGGGT+AGG + chr8_2:4990547-4990566 Msa1229300:CDS 45.0%
TCATGTGTAGTGACCAAAGC+AGG + chr8_2:4990671-4990690 Msa1229300:CDS 45.0%
! GACCACTTATGGAGCTTTTG+TGG + chr8_2:4990806-4990825 Msa1229300:CDS 45.0%
TTCATGCCTCATCACATCAG+TGG - chr8_2:4991103-4991122 None:intergenic 45.0%
TTGCCAACGATAATCGATCC+TGG + chr8_2:4991132-4991151 Msa1229300:intron 45.0%
GAACCAGGATCGATTATCGT+TGG - chr8_2:4991138-4991157 None:intergenic 45.0%
ATAGGGACGAGAATAGAACC+AGG - chr8_2:4991153-4991172 None:intergenic 45.0%
GGCTAGAGTTTATCCAACGT+TGG + chr8_2:4991409-4991428 Msa1229300:CDS 45.0%
TCTTCTTGTCTAGCCGTTGA+TGG + chr8_2:4991599-4991618 Msa1229300:three_prime_UTR 45.0%
!!! AAAGTAAATATTTTATTAAT+TGG + chr8_2:4989164-4989183 Msa1229300:CDS 5.0%
!!! AAGTAAATATTTTATTAATT+GGG + chr8_2:4989165-4989184 Msa1229300:CDS 5.0%
!!! TTATTTTTTATTTTTTGAAA+AGG + chr8_2:4989633-4989652 Msa1229300:intron 5.0%
!!! ATATAGATATTTTTTTAATT+CGG + chr8_2:4989786-4989805 Msa1229300:intron 5.0%
!! AATTAATTAGTTAAAATAAT+TGG + chr8_2:4990376-4990395 Msa1229300:intron 5.0%
!!! AAAGTAAATATTTTATTAAT+TGG + chr8_2:4989164-4989183 Msa1229300:CDS 5.0%
!!! AAGTAAATATTTTATTAATT+GGG + chr8_2:4989165-4989184 Msa1229300:CDS 5.0%
!!! TTATTTTTTATTTTTTGAAA+AGG + chr8_2:4989633-4989652 Msa1229300:intron 5.0%
!!! ATATAGATATTTTTTTAATT+CGG + chr8_2:4989786-4989805 Msa1229300:intron 5.0%
!! AATTAATTAGTTAAAATAAT+TGG + chr8_2:4990376-4990395 Msa1229300:intron 5.0%
!! CTTGGCGTGATATGGTGGAT+TGG + chr8_2:4988066-4988085 Msa1229300:intron 50.0%
ACGTAGGGAAATTGACGGCA+TGG + chr8_2:4988221-4988240 Msa1229300:intron 50.0%
GACCCTACAACTGCTTGGAT+TGG + chr8_2:4989067-4989086 Msa1229300:CDS 50.0%
!! GCTTGGATTGGTCACCATGA+TGG + chr8_2:4989079-4989098 Msa1229300:CDS 50.0%
GACTCAAGCCAAGAGTCCTA+GGG - chr8_2:4990074-4990093 None:intergenic 50.0%
CTGGGAAGCAATTGATCCAG+TGG + chr8_2:4990189-4990208 Msa1229300:CDS 50.0%
TGTTGGAGTAACAGCAGCAC+AGG + chr8_2:4990295-4990314 Msa1229300:CDS 50.0%
GGGGTAGGATTAGGACCATT+TGG + chr8_2:4990562-4990581 Msa1229300:CDS 50.0%
AGAGACACACGTACCTGCTT+TGG - chr8_2:4990687-4990706 None:intergenic 50.0%
TCACATCAGTGGTTGGACGT+TGG - chr8_2:4991092-4991111 None:intergenic 50.0%
GTCCAACCACTGATGTGATG+AGG + chr8_2:4991094-4991113 Msa1229300:intron 50.0%
TGCCTCATCACATCAGTGGT+TGG - chr8_2:4991099-4991118 None:intergenic 50.0%
GTGGAGAGTTTCGGAGCAAA+AGG + chr8_2:4991371-4991390 Msa1229300:CDS 50.0%
!! CTTGGCGTGATATGGTGGAT+TGG + chr8_2:4988066-4988085 Msa1229300:intron 50.0%
ACGTAGGGAAATTGACGGCA+TGG + chr8_2:4988221-4988240 Msa1229300:intron 50.0%
GACCCTACAACTGCTTGGAT+TGG + chr8_2:4989067-4989086 Msa1229300:CDS 50.0%
!! GCTTGGATTGGTCACCATGA+TGG + chr8_2:4989079-4989098 Msa1229300:CDS 50.0%
GACTCAAGCCAAGAGTCCTA+GGG - chr8_2:4990074-4990093 None:intergenic 50.0%
CTGGGAAGCAATTGATCCAG+TGG + chr8_2:4990189-4990208 Msa1229300:CDS 50.0%
TGTTGGAGTAACAGCAGCAC+AGG + chr8_2:4990295-4990314 Msa1229300:CDS 50.0%
GGGGTAGGATTAGGACCATT+TGG + chr8_2:4990562-4990581 Msa1229300:CDS 50.0%
AGAGACACACGTACCTGCTT+TGG - chr8_2:4990687-4990706 None:intergenic 50.0%
TCACATCAGTGGTTGGACGT+TGG - chr8_2:4991092-4991111 None:intergenic 50.0%
GTCCAACCACTGATGTGATG+AGG + chr8_2:4991094-4991113 Msa1229300:intron 50.0%
TGCCTCATCACATCAGTGGT+TGG - chr8_2:4991099-4991118 None:intergenic 50.0%
GTGGAGAGTTTCGGAGCAAA+AGG + chr8_2:4991371-4991390 Msa1229300:CDS 50.0%
GGCTGCTCATGGGAACTTCT+TGG + chr8_2:4987754-4987773 Msa1229300:exon 55.0%
GGACTCAAGCCAAGAGTCCT+AGG - chr8_2:4990075-4990094 None:intergenic 55.0%
AGGGGATTCCTAGGACTCTC+TGG + chr8_2:4990156-4990175 Msa1229300:intron 55.0%
GGATGTGGACCCTGTCTATG+AGG + chr8_2:4990827-4990846 Msa1229300:CDS 55.0%
GGCTGCTCATGGGAACTTCT+TGG + chr8_2:4987754-4987773 Msa1229300:exon 55.0%
GGACTCAAGCCAAGAGTCCT+AGG - chr8_2:4990075-4990094 None:intergenic 55.0%
AGGGGATTCCTAGGACTCTC+TGG + chr8_2:4990156-4990175 Msa1229300:intron 55.0%
GGATGTGGACCCTGTCTATG+AGG + chr8_2:4990827-4990846 Msa1229300:CDS 55.0%
TCAGGGGTGACCCTGAGAGT+TGG + chr8_2:4989687-4989706 Msa1229300:intron 60.0%
TCAGGGGTGACCCTGAGAGT+TGG + chr8_2:4989687-4989706 Msa1229300:intron 60.0%
GGGGTGACCCTGAGAGTTGG+CGG + chr8_2:4989690-4989709 Msa1229300:intron 65.0%
GGGTGACCCTGAGAGTTGGC+GGG + chr8_2:4989691-4989710 Msa1229300:intron 65.0%
TGACCCTGAGAGTTGGCGGG+AGG + chr8_2:4989694-4989713 Msa1229300:intron 65.0%
GACCCTGAGAGTTGGCGGGA+GGG + chr8_2:4989695-4989714 Msa1229300:intron 65.0%
ACCCTGAGAGTTGGCGGGAG+GGG + chr8_2:4989696-4989715 Msa1229300:intron 65.0%
ACCCCTCCCGCCAACTCTCA+GGG - chr8_2:4989700-4989719 None:intergenic 65.0%
GGGGTGACCCTGAGAGTTGG+CGG + chr8_2:4989690-4989709 Msa1229300:intron 65.0%
GGGTGACCCTGAGAGTTGGC+GGG + chr8_2:4989691-4989710 Msa1229300:intron 65.0%
TGACCCTGAGAGTTGGCGGG+AGG + chr8_2:4989694-4989713 Msa1229300:intron 65.0%
GACCCTGAGAGTTGGCGGGA+GGG + chr8_2:4989695-4989714 Msa1229300:intron 65.0%
ACCCTGAGAGTTGGCGGGAG+GGG + chr8_2:4989696-4989715 Msa1229300:intron 65.0%
ACCCCTCCCGCCAACTCTCA+GGG - chr8_2:4989700-4989719 None:intergenic 65.0%
CACCCCTCCCGCCAACTCTC+AGG - chr8_2:4989701-4989720 None:intergenic 70.0%
CTGAGAGTTGGCGGGAGGGG+TGG + chr8_2:4989699-4989718 Msa1229300:intron 70.0%
CACCCCTCCCGCCAACTCTC+AGG - chr8_2:4989701-4989720 None:intergenic 70.0%
CTGAGAGTTGGCGGGAGGGG+TGG + chr8_2:4989699-4989718 Msa1229300:intron 70.0%
GGCGGGAGGGGTGGTAGCCT+AGG + chr8_2:4989708-4989727 Msa1229300:intron 75.0%
GGCGGGAGGGGTGGTAGCCT+AGG + chr8_2:4989708-4989727 Msa1229300:intron 75.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 4987751 4991850 4987751 ID=Msa1229300;Name=Msa1229300
chr8_2 mRNA 4987751 4991850 4987751 ID=Msa1229300-mRNA-1;Parent=Msa1229300;Name=Msa1229300-mRNA-1;_AED=0.18;_eAED=0.18;_QI=11|0.8|0.83|1|1|1|6|303|578
chr8_2 exon 4987751 4987918 4987751 ID=Msa1229300-mRNA-1:exon:1713;Parent=Msa1229300-mRNA-1
chr8_2 exon 4988693 4989585 4988693 ID=Msa1229300-mRNA-1:exon:1714;Parent=Msa1229300-mRNA-1
chr8_2 exon 4990158 4990316 4990158 ID=Msa1229300-mRNA-1:exon:1715;Parent=Msa1229300-mRNA-1
chr8_2 exon 4990448 4990692 4990448 ID=Msa1229300-mRNA-1:exon:1716;Parent=Msa1229300-mRNA-1
chr8_2 exon 4990779 4990869 4990779 ID=Msa1229300-mRNA-1:exon:1717;Parent=Msa1229300-mRNA-1
chr8_2 exon 4991356 4991850 4991356 ID=Msa1229300-mRNA-1:exon:1718;Parent=Msa1229300-mRNA-1
chr8_2 five_prime_UTR 4987751 4987761 4987751 ID=Msa1229300-mRNA-1:five_prime_utr;Parent=Msa1229300-mRNA-1
chr8_2 CDS 4987762 4987918 4987762 ID=Msa1229300-mRNA-1:cds;Parent=Msa1229300-mRNA-1
chr8_2 CDS 4988693 4989585 4988693 ID=Msa1229300-mRNA-1:cds;Parent=Msa1229300-mRNA-1
chr8_2 CDS 4990158 4990316 4990158 ID=Msa1229300-mRNA-1:cds;Parent=Msa1229300-mRNA-1
chr8_2 CDS 4990448 4990692 4990448 ID=Msa1229300-mRNA-1:cds;Parent=Msa1229300-mRNA-1
chr8_2 CDS 4990779 4990869 4990779 ID=Msa1229300-mRNA-1:cds;Parent=Msa1229300-mRNA-1
chr8_2 CDS 4991356 4991547 4991356 ID=Msa1229300-mRNA-1:cds;Parent=Msa1229300-mRNA-1
chr8_2 three_prime_UTR 4991548 4991850 4991548 ID=Msa1229300-mRNA-1:three_prime_utr;Parent=Msa1229300-mRNA-1
Gene Sequence

>Msa1229300

ATGGGAACTTCTTGGTTTTTGGCTACATTTTCCTTCATTATTCTCTATGGTGTTGCTCATATTGAAGCTTTCCATCAAACTCATTCTTCTACCTTTAATTTGAATCAAACATATAAACCTTCTTTTCACTTCCAACCTTCCAAGAATTGGATGAATGGTCCTATGAGATACAAGGGACTATACCATATTTTCTACCAACACAACCCAAAAGGTGCTACATGGAGCAACAATAGCATTGTTTGGGGGCATTCTGTTTCAAAAGATCTAGTGAATTGGTTCCCATTACAACATGCTCTTACCCCTTCTCAACCATATGACATCAATGGTTGTTGGTCAGGTTCAACCACATTTCTCTCGAATGACAAACCAACCATCTTATACACAGGAATTGACATCCATCAACACCAAACTCAAAATTTAGCTATACCCAAAAATGTGTCTGACCCATTTCTTAGGGAATGGATAAAATCACCCAAGAACCCTATTATGTTGCCAAGTATTGTTAACAAAATTAACGCAACATCGTTTAGAGACCCTACAACTGCTTGGATTGGTCACCATGATGGATTATGGAGGGTACTTGTTGGAAGCCAACAAAAGGACAATAAAGGAATTACACTTTTATTTAAAAGTAAATATTTTATTAATTGGGTTCAATCTAAACATCCTTTTTATTCAGCCAAAAAAATTGGAATGTTGGAGTGTCCTGATTTTTTTCCAGTGTTGATTAATAGTACAATTGGACTTGACACATCAATTAAGTATGATCATGATAGTATTAGATATGTGCTTAAGGTTAGTTTAATTGATGTGTCACATGATTGTTATTTGATTGGTAGTTATGACACAATCAAGGACATGTTTATTCCTAAAAAGGGATTTGAGCAAAATAACAATGAATTAACATTGGTTTTAAGATATGATTATGGTAAGTTTTATGCATCTAAAACATTTTATGATGATGCAAAAAAGAGAAGAGTCTTATGGGGTTGGATTAATGAATCTTCAATTCAAGAGGATGATGTACAAAAAGGATGGTCTGGAATTCAGGGGATTCCTAGGACTCTCTGGCTTGAAAAATCTGGGAAGCAATTGATCCAGTGGCCTATAGTTGAAATTGAAAAATTACGTACCAACCCTATTAAATTTAACTCCAAAGTGTTAAAGGGAGGAACATTGCTTGAGATTGTTGGAGTAACAGCAGCACAGGCTGATGTTGAAATTTCATTTGAAGTGAATGAACTTGAAAAGGCACAAGCATTAGACCCTAGTTGGAAAATGGACCCTCAACATCTATGTAATGAAAATGGTGCAAAAGTTAAAGGGGTAGGATTAGGACCATTTGGTTTACTAGTTTTGGCTTCAAAGGACATGCAAGAATATACAAGAATTTTCTTTAAGGTATTTAGGGCAAACAAAAAGCACGTTGTGCTCATGTGTAGTGACCAAAGCAGGTCTTCTTTGAATCACAAGAACGATTTGACCACTTATGGAGCTTTTGTGGATGTGGACCCTGTCTATGAGGAGTTGTCAATAAGAAGCTTGATAGATAACTCAGTAGTGGAGAGTTTCGGAGCAAAAGGAAAAACATGCATCACGGCTAGAGTTTATCCAACGTTGGCAATCAATGATAAAGCACACCTTCATGCATTCAATAATGGAACAGTTGATGTTAAGATCAAGCAGTTAAGTGCTTGGAGCATGAAAAAAGCAAATATTAATGAAATACATTATTAA

Protein sequence

>Msa1229300

MGTSWFLATFSFIILYGVAHIEAFHQTHSSTFNLNQTYKPSFHFQPSKNWMNGPMRYKGLYHIFYQHNPKGATWSNNSIVWGHSVSKDLVNWFPLQHALTPSQPYDINGCWSGSTTFLSNDKPTILYTGIDIHQHQTQNLAIPKNVSDPFLREWIKSPKNPIMLPSIVNKINATSFRDPTTAWIGHHDGLWRVLVGSQQKDNKGITLLFKSKYFINWVQSKHPFYSAKKIGMLECPDFFPVLINSTIGLDTSIKYDHDSIRYVLKVSLIDVSHDCYLIGSYDTIKDMFIPKKGFEQNNNELTLVLRYDYGKFYASKTFYDDAKKRRVLWGWINESSIQEDDVQKGWSGIQGIPRTLWLEKSGKQLIQWPIVEIEKLRTNPIKFNSKVLKGGTLLEIVGVTAAQADVEISFEVNELEKAQALDPSWKMDPQHLCNENGAKVKGVGLGPFGLLVLASKDMQEYTRIFFKVFRANKKHVVLMCSDQSRSSLNHKNDLTTYGAFVDVDPVYEELSIRSLIDNSVVESFGAKGKTCITARVYPTLAINDKAHLHAFNNGTVDVKIKQLSAWSMKKANINEIHY*