AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0248600

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0248600 MtrunA17_Chr2g0303731 99.138 580 5 0 1 580 1 580 0.0 1176
Msa0248600 MtrunA17_Chr8g0376631 84.749 577 87 1 1 577 1 576 0.0 981
Msa0248600 MtrunA17_Chr2g0303701 74.171 573 142 4 1 571 1 569 0.0 838
Msa0248600 MtrunA17_Chr8g0376601 70.246 568 167 2 1 568 1 566 0.0 804
Msa0248600 MtrunA17_Chr8g0376611 76.693 502 114 2 70 571 3 501 0.0 786
Msa0248600 MtrunA17_Chr2g0290181 58.025 567 228 5 2 562 3 565 0.0 650
Msa0248600 MtrunA17_Chr2g0290161 51.992 502 205 7 67 562 1 472 1.88e-165 480
Msa0248600 MtrunA17_Chr5g0434261 53.281 381 125 4 188 568 1 328 1.91e-133 392
Msa0248600 MtrunA17_Chr7g0214451 57.925 347 143 1 21 367 28 371 2.24e-131 393
Msa0248600 MtrunA17_Chr7g0214451 56.154 130 52 1 450 579 376 500 3.62e-39 150
Msa0248600 MtrunA17_Chr1g0213611 58.011 362 141 2 6 367 66 416 1.41e-130 393
Msa0248600 MtrunA17_Chr1g0213611 54.962 131 54 1 450 580 425 550 3.73e-39 150
Msa0248600 MtrunA17_Chr1g0213631 56.656 323 137 1 45 367 4 323 2.64e-114 348
Msa0248600 MtrunA17_Chr1g0213631 54.962 131 59 0 447 577 326 456 5.02e-39 149
Msa0248600 MtrunA17_Chr6g0450271 70.619 194 55 1 223 416 32 223 1.21e-86 269
Msa0248600 MtrunA17_Chr5g0434251 73.418 158 41 1 415 572 2 158 2.25e-80 249
Msa0248600 MtrunA17_Chr6g0450291 71.765 170 46 1 248 417 1 168 3.86e-76 239
Msa0248600 MtrunA17_Chr6g0450241 71.176 170 47 1 248 417 1 168 3.48e-75 237
Msa0248600 MtrunA17_Chr6g0450281 71.598 169 46 1 248 416 1 167 3.88e-75 237
Msa0248600 MtrunA17_Chr5g0434231 69.364 173 29 1 70 242 6 154 1.13e-74 234
Msa0248600 MtrunA17_Chr7g0250881 37.082 329 197 3 33 361 72 390 8.30e-60 207
Msa0248600 MtrunA17_Chr7g0250881 35.780 109 70 0 449 557 398 506 1.02e-12 70.9
Msa0248600 MtrunA17_Chr4g0036021 35.244 349 211 6 22 358 23 368 1.26e-58 204
Msa0248600 MtrunA17_Chr4g0036021 33.628 113 69 1 460 572 394 500 1.15e-11 67.4
Msa0248600 MtrunA17_Chr2g0282031 36.310 336 208 3 25 357 52 384 5.75e-58 202
Msa0248600 MtrunA17_Chr2g0282031 39.091 110 60 1 453 555 393 502 1.87e-14 76.3
Msa0248600 MtrunA17_Chr6g0457781 37.195 328 196 3 33 360 112 429 1.25e-57 202
Msa0248600 MtrunA17_Chr6g0457781 35.849 106 68 0 449 554 438 543 3.45e-12 68.9
Msa0248600 MtrunA17_Chr6g0485661 37.183 355 210 6 7 353 37 386 1.24e-54 193
Msa0248600 MtrunA17_Chr4g0034681 32.778 360 222 6 22 364 26 382 3.51e-53 189
Msa0248600 MtrunA17_Chr4g0034681 30.894 123 74 2 455 572 388 504 4.31e-11 65.5
Msa0248600 MtrunA17_Chr3g0144361 33.871 372 208 8 20 362 18 380 4.57e-53 189
Msa0248600 MtrunA17_Chr4g0021771 34.911 338 212 5 25 358 54 387 1.96e-51 184
Msa0248600 MtrunA17_Chr4g0021771 45.833 96 52 0 461 556 410 505 5.97e-18 87.4
Msa0248600 MtrunA17_Chr5g0394341 32.703 370 221 7 24 372 20 382 4.80e-51 183
Msa0248600 MtrunA17_Chr8g0390521 35.312 337 209 4 23 353 15 348 1.22e-50 182
Msa0248600 MtrunA17_Chr8g0390521 39.560 91 55 0 463 553 381 471 2.54e-11 66.2
Msa0248600 MtrunA17_Chr8g0373531 34.783 345 205 6 23 351 16 356 8.93e-50 179
Msa0248600 MtrunA17_Chr8g0373531 34.906 106 69 0 452 557 381 486 9.74e-14 73.9
Msa0248600 MtrunA17_Chr5g0432581 33.799 358 215 5 23 361 16 370 1.44e-49 179
Msa0248600 MtrunA17_Chr5g0432581 36.190 105 67 0 452 556 381 485 3.06e-12 69.3
Msa0248600 MtrunA17_Chr5g0434241 79.208 101 21 0 248 348 1 101 7.05e-49 165
Msa0248600 MtrunA17_Chr3g0121674 49.412 170 83 1 188 357 1 167 2.29e-48 171
Msa0248600 MtrunA17_Chr3g0121674 50.758 132 57 2 450 580 183 307 9.47e-37 139
Msa0248600 MtrunA17_Chr1g0205681 31.768 362 217 7 33 372 30 383 4.26e-47 172
Msa0248600 MtrunA17_Chr1g0205671 31.536 371 225 9 23 372 20 382 3.50e-46 169
Msa0248600 MtrunA17_Chr5g0403831 33.149 362 215 8 16 358 21 374 1.44e-45 168
Msa0248600 MtrunA17_Chr1g0205691 32.873 362 213 8 33 372 29 382 3.79e-45 167
Msa0248600 MtrunA17_Chr5g0445601 30.952 378 234 7 1 359 1 370 2.90e-44 164
Msa0248600 MtrunA17_Chr4g0032021 32.865 356 221 8 20 360 92 444 8.70e-44 164
Msa0248600 MtrunA17_Chr4g0032021 36.000 100 64 0 452 551 453 552 5.52e-13 71.6
Msa0248600 MtrunA17_Chr4g0065311 30.159 378 233 8 1 360 1 365 2.50e-43 161
Msa0248600 MtrunA17_Chr4g0065311 38.793 116 58 4 454 565 384 490 5.78e-13 71.2
Msa0248600 MtrunA17_Chr1g0164851 29.499 339 214 5 23 343 20 351 3.14e-43 162
Msa0248600 MtrunA17_Chr1g0164871 29.586 338 213 5 24 343 21 351 3.24e-43 161
Msa0248600 MtrunA17_Chr8g0390141 30.053 376 230 8 21 372 18 384 5.05e-43 161
Msa0248600 MtrunA17_Chr7g0257631 31.268 355 214 6 25 359 60 404 2.39e-42 159
Msa0248600 MtrunA17_Chr4g0039651 31.778 343 201 8 36 356 55 386 9.28e-42 157
Msa0248600 MtrunA17_Chr4g0039651 42.424 99 57 0 452 550 399 497 1.20e-14 76.6
Msa0248600 MtrunA17_Chr4g0048051 31.085 341 205 6 24 343 21 352 1.15e-41 157
Msa0248600 MtrunA17_Chr5g0437021 29.290 338 214 5 24 343 21 351 3.28e-41 156
Msa0248600 MtrunA17_Chr5g0417611 31.304 345 202 9 23 343 20 353 1.11e-40 154
Msa0248600 MtrunA17_Chr3g0119401 31.268 339 219 5 24 360 95 421 3.00e-40 154
Msa0248600 MtrunA17_Chr6g0486021 31.977 344 217 7 14 355 40 368 3.71e-40 152
Msa0248600 MtrunA17_Chr4g0048411 31.268 339 207 5 24 343 21 352 3.84e-40 153
Msa0248600 MtrunA17_Chr8g0390261 29.855 345 216 6 34 359 34 371 5.81e-40 152
Msa0248600 MtrunA17_Chr3g0144261 39.091 220 129 3 29 246 7 223 8.58e-40 154
Msa0248600 MtrunA17_Chr3g0144261 37.079 89 56 0 459 547 623 711 5.88e-12 68.6
Msa0248600 MtrunA17_Chr4g0065324 30.357 336 210 6 25 343 28 356 3.93e-39 150
Msa0248600 MtrunA17_Chr4g0065324 37.838 111 58 3 457 564 395 497 2.13e-11 66.6
Msa0248600 MtrunA17_Chr5g0420841 30.460 348 211 7 33 358 28 366 1.27e-38 149
Msa0248600 MtrunA17_Chr3g0128081 29.661 354 220 8 26 358 22 367 1.77e-38 148
Msa0248600 MtrunA17_Chr6g0486681 28.986 345 217 6 35 359 35 371 9.04e-38 146
Msa0248600 MtrunA17_Chr6g0486671 28.986 345 217 6 35 359 35 371 9.04e-38 146
Msa0248600 MtrunA17_Chr1g0155221 32.404 287 176 5 78 361 98 369 1.57e-37 145
Msa0248600 MtrunA17_Chr1g0155221 30.833 120 79 2 438 554 371 489 1.54e-11 67.0
Msa0248600 MtrunA17_Chr3g0085971 30.199 351 208 9 33 358 28 366 2.11e-37 145
Msa0248600 MtrunA17_Chr4g0004821 32.036 334 212 6 21 353 33 352 2.47e-37 144
Msa0248600 MtrunA17_Chr8g0376621 88.235 68 8 0 1 68 1 68 5.16e-36 129
Msa0248600 MtrunA17_Chr3g0115741 29.070 344 213 7 37 359 37 370 9.88e-36 140
Msa0248600 MtrunA17_Chr3g0115721 31.672 341 205 8 37 359 34 364 1.16e-35 140
Msa0248600 MtrunA17_Chr3g0146061 33.945 327 196 8 36 353 14 329 1.95e-35 142
Msa0248600 MtrunA17_Chr3g0146061 34.653 101 66 0 447 547 621 721 2.01e-12 70.1
Msa0248600 MtrunA17_Chr7g0259471 30.548 347 208 6 24 361 37 359 3.53e-35 138
Msa0248600 MtrunA17_Chr7g0259471 39.048 105 59 2 452 554 373 474 8.48e-14 73.9
Msa0248600 MtrunA17_Chr3g0115711 26.842 380 248 7 1 364 6 371 4.90e-35 138
Msa0248600 MtrunA17_Chr5g0434221 86.765 68 9 0 1 68 1 68 5.61e-35 126
Msa0248600 MtrunA17_Chr2g0286721 31.250 336 214 7 26 360 49 368 7.79e-35 137
Msa0248600 MtrunA17_Chr3g0128171 31.164 292 186 7 56 343 25 305 1.89e-34 135
Msa0248600 MtrunA17_Chr3g0115751 29.651 344 216 7 33 359 35 369 2.39e-34 136
Msa0248600 MtrunA17_Chr3g0078991 30.702 342 205 9 25 343 22 354 2.52e-34 136
Msa0248600 MtrunA17_Chr5g0407441 33.333 231 151 3 26 254 4 233 4.86e-34 137
Msa0248600 MtrunA17_Chr5g0407441 32.323 99 67 0 449 547 605 703 8.13e-11 65.1
Msa0248600 MtrunA17_Chr8g0373181 31.395 344 205 9 26 361 47 367 1.10e-33 134
Msa0248600 MtrunA17_Chr8g0373181 33.333 117 70 3 435 550 373 482 3.47e-12 68.9
Msa0248600 MtrunA17_Chr7g0273281 28.916 332 218 7 36 366 72 386 1.89e-33 134
Msa0248600 MtrunA17_Chr7g0273281 36.111 108 68 1 452 559 395 501 4.31e-13 72.0
Msa0248600 MtrunA17_Chr4g0066581 29.499 339 216 6 26 360 52 371 3.35e-33 132
Msa0248600 MtrunA17_Chr4g0066581 34.951 103 66 1 452 554 386 487 4.40e-12 68.6
Msa0248600 MtrunA17_Chr3g0115781 30.000 340 211 7 37 358 36 366 5.51e-33 132
Msa0248600 MtrunA17_Chr8g0370141 32.883 222 144 4 26 244 4 223 2.10e-32 129
Msa0248600 MtrunA17_Chr7g0259221 29.942 344 218 8 22 361 37 361 1.48e-31 127
Msa0248600 MtrunA17_Chr7g0259221 42.000 100 55 2 452 550 375 472 7.95e-14 73.9
Msa0248600 MtrunA17_Chr3g0078971 30.233 344 207 9 23 343 20 353 2.65e-31 127
Msa0248600 MtrunA17_Chr3g0078791 29.897 291 171 6 56 343 17 277 4.54e-29 120
Msa0248600 MtrunA17_Chr5g0419321 33.493 209 136 3 48 254 54 261 5.20e-29 122
Msa0248600 MtrunA17_Chr5g0419321 31.818 110 74 1 438 547 621 729 4.80e-11 65.9
Msa0248600 MtrunA17_Chr8g0373191 30.034 293 165 7 73 361 83 339 1.66e-28 118
Msa0248600 MtrunA17_Chr3g0115731 27.507 349 187 12 37 358 34 343 2.11e-21 97.8
Msa0248600 MtrunA17_Chr5g0404191 34.682 173 103 4 78 247 99 264 1.38e-20 92.8
Msa0248600 MtrunA17_Chr2g0290171 59.701 67 24 1 2 68 3 66 6.56e-20 84.0
Msa0248600 MtrunA17_Chr7g0273271 32.584 178 112 3 36 213 37 206 9.45e-20 88.2
Msa0248600 MtrunA17_Chr4g0065351 28.169 213 145 4 148 359 2 207 8.65e-19 88.2
Msa0248600 MtrunA17_Chr6g0450251 60.417 48 17 1 369 416 1 46 5.84e-15 70.1
Msa0248600 MtrunA17_Chr5g0404181 33.607 122 71 3 437 550 9 128 2.59e-14 70.1
Msa0248600 MtrunA17_Chr7g0273261 35.156 128 75 2 452 579 137 256 1.77e-13 70.9
Msa0248600 MtrunA17_Chr5g0437201 25.773 291 197 9 73 356 135 413 6.00e-12 68.2
Msa0248600 MtrunA17_Chr8g0370151 33.663 101 67 0 449 549 244 344 3.34e-11 65.1
Msa0248600 MtrunA17_Chr2g0319001 26.667 285 176 12 76 341 131 401 4.35e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0248600 AT1G30220.1 71.979 571 155 4 1 567 1 570 0.0 845
Msa0248600 AT4G16480.2 58.259 563 223 6 1 554 2 561 0.0 653
Msa0248600 AT4G16480.3 58.259 563 223 6 1 554 2 561 0.0 653
Msa0248600 AT4G16480.1 58.259 563 223 6 1 554 2 561 0.0 653
Msa0248600 AT2G35740.1 55.000 540 231 5 24 554 24 560 0.0 635
Msa0248600 AT2G43330.1 58.382 346 140 2 23 367 28 370 7.73e-124 374
Msa0248600 AT2G43330.1 60.163 123 48 1 450 571 376 498 7.35e-42 158
Msa0248600 AT3G18830.1 28.571 581 297 13 22 578 32 518 4.04e-60 209
Msa0248600 AT4G36670.1 36.390 349 203 6 23 356 14 358 3.50e-56 197
Msa0248600 AT4G36670.1 36.538 104 66 0 452 555 378 481 4.18e-14 75.5
Msa0248600 AT2G20780.1 36.364 341 209 5 20 357 49 384 7.74e-54 191
Msa0248600 AT2G20780.1 41.284 109 60 1 452 556 399 507 1.49e-16 83.2
Msa0248600 AT5G16150.2 36.909 317 190 3 33 349 112 418 1.21e-52 189
Msa0248600 AT5G16150.2 34.259 108 71 0 443 550 432 539 2.31e-11 67.0
Msa0248600 AT5G16150.1 36.909 317 190 3 33 349 112 418 1.21e-52 189
Msa0248600 AT5G16150.1 34.259 108 71 0 443 550 432 539 2.31e-11 67.0
Msa0248600 AT5G16150.3 36.909 317 190 3 33 349 112 418 1.21e-52 189
Msa0248600 AT5G16150.3 34.259 108 71 0 443 550 432 539 2.31e-11 67.0
Msa0248600 AT2G18480.1 37.183 355 200 8 23 358 15 365 5.69e-52 186
Msa0248600 AT2G18480.1 44.118 102 57 0 452 553 382 483 3.86e-17 85.1
Msa0248600 AT2G16120.1 33.239 355 208 5 22 356 22 367 1.45e-50 182
Msa0248600 AT2G16120.1 33.613 119 79 0 452 570 388 506 1.53e-13 73.6
Msa0248600 AT3G05960.1 32.527 372 222 9 5 359 5 364 2.21e-50 182
Msa0248600 AT1G07340.1 35.258 329 187 6 33 343 30 350 3.46e-50 181
Msa0248600 AT2G16130.1 33.428 353 202 6 28 356 24 367 9.99e-49 177
Msa0248600 AT2G16130.1 35.455 110 71 0 452 561 388 497 1.32e-13 73.9
Msa0248600 AT5G26250.1 32.861 353 211 9 25 359 21 365 6.04e-48 175
Msa0248600 AT1G50310.1 31.429 350 216 5 25 356 24 367 9.27e-48 174
Msa0248600 AT3G19940.1 30.564 337 209 6 25 343 24 353 1.28e-44 166
Msa0248600 AT5G26340.1 32.329 365 218 7 24 367 21 377 2.02e-44 166
Msa0248600 AT5G59250.1 31.989 372 228 11 18 371 92 456 2.50e-44 166
Msa0248600 AT5G59250.1 40.000 95 57 0 457 551 460 554 1.25e-12 70.9
Msa0248600 AT2G20780.2 34.940 332 203 7 31 357 3 326 7.67e-44 163
Msa0248600 AT2G20780.2 41.284 109 60 1 452 556 341 449 2.28e-16 82.4
Msa0248600 AT1G05030.1 33.951 324 205 4 33 356 86 400 2.89e-43 162
Msa0248600 AT1G11260.1 32.456 342 201 7 23 343 20 352 1.30e-42 160
Msa0248600 AT5G23270.1 31.868 364 205 8 2 343 12 354 1.51e-42 160
Msa0248600 AT1G67300.2 31.099 373 238 8 4 373 31 387 2.14e-41 156
Msa0248600 AT5G17010.1 31.956 363 226 8 26 373 48 404 2.49e-41 156
Msa0248600 AT5G17010.3 31.956 363 226 8 26 373 48 404 2.49e-41 156
Msa0248600 AT5G17010.4 31.956 363 226 8 26 373 48 404 2.49e-41 156
Msa0248600 AT1G77210.2 30.278 360 220 7 2 343 9 355 2.95e-41 156
Msa0248600 AT1G77210.1 30.278 360 220 7 2 343 9 355 2.95e-41 156
Msa0248600 AT1G79820.4 31.653 357 225 8 14 368 44 383 2.25e-40 153
Msa0248600 AT3G51490.1 36.607 224 137 4 26 246 4 225 4.82e-40 155
Msa0248600 AT3G51490.1 34.653 101 66 0 447 547 606 706 9.47e-12 68.6
Msa0248600 AT3G51490.2 36.607 224 137 4 26 246 4 225 5.33e-40 155
Msa0248600 AT3G51490.2 42.718 103 50 2 265 358 503 605 1.72e-12 70.9
Msa0248600 AT3G51490.2 34.653 101 66 0 447 547 614 714 8.82e-12 68.6
Msa0248600 AT1G67300.4 30.986 355 228 7 4 355 31 371 6.25e-40 151
Msa0248600 AT1G67300.5 30.986 355 228 7 4 355 31 371 6.25e-40 151
Msa0248600 AT5G61520.1 30.946 391 236 11 7 372 5 386 6.27e-40 153
Msa0248600 AT1G79820.2 31.933 357 224 8 14 368 44 383 8.28e-40 152
Msa0248600 AT1G79820.1 31.933 357 224 8 14 368 44 383 8.28e-40 152
Msa0248600 AT1G67300.6 30.986 355 228 7 4 355 31 371 8.51e-40 151
Msa0248600 AT1G67300.7 30.986 355 228 7 4 355 31 371 8.51e-40 151
Msa0248600 AT1G67300.1 30.986 355 228 7 4 355 31 371 1.13e-39 152
Msa0248600 AT1G67300.3 30.986 355 228 7 4 355 31 371 1.13e-39 152
Msa0248600 AT3G19930.1 31.176 340 205 8 24 343 21 351 1.50e-39 152
Msa0248600 AT3G19930.2 31.176 340 205 8 24 343 21 351 1.50e-39 152
Msa0248600 AT1G20840.2 38.117 223 131 4 29 248 7 225 1.54e-39 154
Msa0248600 AT1G20840.2 39.785 93 56 0 459 551 625 717 3.86e-13 72.8
Msa0248600 AT1G20840.1 38.117 223 131 4 29 248 7 225 1.54e-39 154
Msa0248600 AT1G20840.1 39.785 93 56 0 459 551 625 717 3.86e-13 72.8
Msa0248600 AT4G21480.1 32.249 338 201 5 25 343 22 350 4.27e-39 150
Msa0248600 AT4G02050.2 29.261 352 225 7 25 359 26 370 1.13e-38 149
Msa0248600 AT4G02050.1 29.261 352 225 7 25 359 26 370 1.13e-38 149
Msa0248600 AT1G05030.2 34.021 291 184 3 67 357 67 349 1.68e-38 148
Msa0248600 AT2G48020.4 30.499 341 218 7 23 361 24 347 3.52e-38 145
Msa0248600 AT3G03090.1 30.029 343 209 6 35 356 56 388 1.38e-37 146
Msa0248600 AT2G48020.2 30.499 341 218 7 23 361 24 347 1.65e-37 145
Msa0248600 AT2G48020.2 44.231 104 55 2 452 554 361 462 3.48e-17 84.7
Msa0248600 AT2G48020.1 30.499 341 218 7 23 361 24 347 1.65e-37 145
Msa0248600 AT2G48020.1 44.231 104 55 2 452 554 361 462 3.48e-17 84.7
Msa0248600 AT5G61520.2 33.010 309 195 8 67 372 39 338 6.03e-37 143
Msa0248600 AT5G27360.4 33.233 331 203 6 31 360 40 353 1.96e-36 141
Msa0248600 AT5G27360.3 33.233 331 203 6 31 360 88 401 2.52e-36 142
Msa0248600 AT5G27360.3 35.135 111 71 1 446 556 410 519 2.88e-11 66.6
Msa0248600 AT5G27360.1 33.233 331 203 6 31 360 40 353 5.76e-36 141
Msa0248600 AT5G27360.1 37.255 102 63 1 455 556 371 471 2.60e-11 66.6
Msa0248600 AT2G48020.3 30.960 323 204 7 23 343 24 329 2.33e-35 136
Msa0248600 AT1G75220.1 32.653 294 180 6 78 368 97 375 4.42e-35 138
Msa0248600 AT1G75220.1 35.870 92 58 1 463 554 397 487 5.47e-12 68.9
Msa0248600 AT3G05400.1 26.582 474 255 13 78 550 75 456 1.18e-34 137
Msa0248600 AT4G35300.9 37.559 213 130 3 36 246 14 225 1.50e-34 139
Msa0248600 AT4G35300.9 39.583 96 58 0 452 547 615 710 9.75e-14 74.7
Msa0248600 AT4G35300.2 37.559 213 130 3 36 246 14 225 1.50e-34 139
Msa0248600 AT4G35300.2 39.583 96 58 0 452 547 615 710 9.75e-14 74.7
Msa0248600 AT4G35300.3 37.559 213 130 3 36 246 14 225 1.50e-34 139
Msa0248600 AT4G35300.3 39.583 96 58 0 452 547 615 710 9.75e-14 74.7
Msa0248600 AT4G35300.4 37.559 213 130 3 36 246 14 225 1.61e-34 139
Msa0248600 AT4G35300.4 39.583 96 58 0 452 547 625 720 1.03e-13 74.7
Msa0248600 AT4G35300.8 37.559 213 130 3 36 246 14 225 1.61e-34 139
Msa0248600 AT4G35300.8 39.583 96 58 0 452 547 625 720 1.03e-13 74.7
Msa0248600 AT4G35300.6 37.559 213 130 3 36 246 14 225 1.61e-34 139
Msa0248600 AT4G35300.6 39.583 96 58 0 452 547 625 720 1.03e-13 74.7
Msa0248600 AT4G35300.11 37.559 213 130 3 36 246 14 225 1.61e-34 139
Msa0248600 AT4G35300.11 39.583 96 58 0 452 547 625 720 1.03e-13 74.7
Msa0248600 AT4G35300.1 37.559 213 130 3 36 246 14 225 1.61e-34 139
Msa0248600 AT4G35300.1 39.583 96 58 0 452 547 625 720 1.03e-13 74.7
Msa0248600 AT4G35300.10 37.559 213 130 3 36 246 14 225 1.61e-34 139
Msa0248600 AT4G35300.10 39.583 96 58 0 452 547 625 720 1.03e-13 74.7
Msa0248600 AT4G35300.7 37.559 213 130 3 36 246 14 225 1.61e-34 139
Msa0248600 AT4G35300.7 39.583 96 58 0 452 547 625 720 1.03e-13 74.7
Msa0248600 AT3G05155.1 29.882 338 218 6 23 360 24 342 9.12e-34 134
Msa0248600 AT3G05155.1 37.255 102 59 2 452 551 358 456 1.99e-14 76.3
Msa0248600 AT1G19450.1 33.000 300 171 7 78 368 98 376 1.74e-33 134
Msa0248600 AT3G05155.2 30.218 321 205 6 23 343 24 325 3.35e-33 130
Msa0248600 AT5G18840.1 30.178 338 215 7 26 360 44 363 1.03e-32 131
Msa0248600 AT5G18840.1 39.815 108 60 2 452 557 378 482 1.78e-13 73.6
Msa0248600 AT3G05400.2 26.160 474 237 14 78 550 75 436 1.19e-31 128
Msa0248600 AT1G08930.1 29.305 331 216 8 31 360 63 376 1.51e-31 128
Msa0248600 AT1G08930.1 33.000 100 66 1 455 554 394 492 6.21e-12 68.6
Msa0248600 AT1G08930.2 29.305 331 216 8 31 360 63 376 1.51e-31 128
Msa0248600 AT1G08930.2 33.000 100 66 1 455 554 394 492 6.21e-12 68.6
Msa0248600 AT1G34580.1 28.446 341 218 6 37 358 35 368 1.69e-31 128
Msa0248600 AT5G27350.1 30.904 343 219 6 31 373 36 360 3.88e-31 127
Msa0248600 AT5G27350.1 38.384 99 60 1 452 550 364 461 5.33e-11 65.5
Msa0248600 AT3G51490.3 37.714 175 105 3 75 246 2 175 1.93e-30 127
Msa0248600 AT3G51490.3 42.718 103 50 2 265 358 453 555 1.66e-12 70.9
Msa0248600 AT3G51490.3 34.653 101 66 0 447 547 564 664 8.98e-12 68.6
Msa0248600 AT1G54730.3 29.123 285 187 6 78 361 81 351 3.43e-30 123
Msa0248600 AT1G54730.2 29.123 285 187 6 78 361 81 351 3.62e-30 124
Msa0248600 AT1G54730.2 37.000 100 62 1 451 550 364 462 1.25e-12 70.9
Msa0248600 AT1G54730.9 29.225 284 186 6 78 360 81 350 3.68e-30 123
Msa0248600 AT1G54730.7 29.225 284 186 6 78 360 81 350 3.68e-30 123
Msa0248600 AT1G34580.2 29.831 295 197 4 67 358 31 318 4.30e-30 124
Msa0248600 AT3G05165.4 29.909 331 214 5 31 360 35 348 9.77e-30 122
Msa0248600 AT3G05165.5 29.909 331 214 5 31 360 35 348 9.77e-30 122
Msa0248600 AT1G50310.2 31.963 219 142 3 139 356 12 224 1.06e-29 121
Msa0248600 AT3G05150.1 32.028 281 175 6 78 356 84 350 1.18e-29 122
Msa0248600 AT3G05150.1 40.385 104 57 2 452 553 369 469 6.84e-15 77.8
Msa0248600 AT3G05150.3 32.028 281 175 6 78 356 84 350 1.18e-29 122
Msa0248600 AT3G05150.3 40.385 104 57 2 452 553 369 469 6.84e-15 77.8
Msa0248600 AT3G05150.2 32.028 281 175 6 78 356 84 350 1.19e-29 122
Msa0248600 AT3G05150.2 38.462 117 66 3 452 566 369 481 1.03e-15 80.5
Msa0248600 AT1G54730.11 29.963 267 172 6 78 343 81 333 2.83e-29 119
Msa0248600 AT3G05165.3 29.909 331 214 5 31 360 35 348 3.29e-29 121
Msa0248600 AT3G05165.2 29.909 331 214 5 31 360 35 348 3.29e-29 121
Msa0248600 AT3G05165.1 29.909 331 214 5 31 360 35 348 3.29e-29 121
Msa0248600 AT4G04750.1 30.986 284 183 5 78 360 85 356 3.46e-29 121
Msa0248600 AT4G04750.2 30.986 284 183 5 78 360 85 356 3.46e-29 121
Msa0248600 AT3G05165.6 29.909 331 214 5 31 360 35 348 3.71e-29 121
Msa0248600 AT4G04750.3 30.986 284 183 5 78 360 129 400 4.34e-29 121
Msa0248600 AT4G04750.3 35.849 106 67 1 452 557 415 519 9.59e-11 65.1
Msa0248600 AT5G27360.2 32.950 261 160 5 101 360 3 249 1.09e-28 118
Msa0248600 AT5G27360.2 37.255 102 63 1 455 556 267 367 2.84e-11 65.9
Msa0248600 AT5G27360.5 32.950 261 160 5 101 360 3 249 1.09e-28 118
Msa0248600 AT5G27360.5 37.255 102 63 1 455 556 267 367 2.84e-11 65.9
Msa0248600 AT1G08920.3 30.769 325 207 8 26 349 32 339 1.32e-28 119
Msa0248600 AT1G08920.1 30.769 325 207 8 26 349 32 339 1.37e-28 119
Msa0248600 AT1G08920.1 37.374 99 61 1 455 553 368 465 5.66e-11 65.5
Msa0248600 AT5G17010.2 32.740 281 165 7 26 287 45 320 1.78e-28 119
Msa0248600 AT3G05160.1 29.607 331 215 6 31 360 26 339 1.93e-28 119
Msa0248600 AT3G05160.3 29.930 284 184 5 78 360 21 290 6.29e-28 116
Msa0248600 AT3G05160.2 29.930 284 184 5 78 360 21 290 6.29e-28 116
Msa0248600 AT1G08920.2 30.530 321 205 8 26 345 32 335 6.55e-28 117
Msa0248600 AT1G08920.2 37.374 99 61 1 455 553 375 472 5.56e-11 65.5
Msa0248600 AT1G79820.3 27.731 357 191 7 14 368 44 335 7.02e-27 114
Msa0248600 AT4G04760.1 28.902 346 228 8 23 366 29 358 8.92e-27 114
Msa0248600 AT4G04760.1 34.454 119 72 3 435 553 355 467 2.74e-11 66.6
Msa0248600 AT4G04760.3 29.310 290 193 5 78 366 21 299 1.71e-26 112
Msa0248600 AT4G04760.3 34.454 119 72 3 435 553 296 408 2.33e-11 66.6
Msa0248600 AT1G08890.1 28.727 275 181 5 78 351 76 336 1.97e-26 113
Msa0248600 AT1G08890.1 35.294 102 61 2 454 553 362 460 4.71e-11 65.9
Msa0248600 AT1G54730.8 28.794 257 170 6 78 333 81 325 2.50e-26 111
Msa0248600 AT1G54730.4 28.794 257 170 6 78 333 81 325 2.92e-26 111
Msa0248600 AT1G54730.5 28.794 257 170 6 78 333 81 325 3.53e-26 112
Msa0248600 AT1G54730.5 37.000 100 62 1 451 550 343 441 1.38e-12 70.5
Msa0248600 AT1G54730.10 30.172 232 151 5 78 308 81 302 6.95e-26 108
Msa0248600 AT1G54730.6 30.172 232 151 5 78 308 81 302 6.95e-26 108
Msa0248600 AT1G08900.4 29.818 275 178 4 78 351 74 334 1.29e-24 107
Msa0248600 AT1G77210.3 33.010 206 131 3 139 343 7 206 2.23e-24 105
Msa0248600 AT1G08900.3 29.818 275 178 4 78 351 66 326 2.40e-24 106
Msa0248600 AT1G08900.3 36.538 104 65 1 452 555 350 452 8.69e-13 71.2
Msa0248600 AT1G08900.1 29.818 275 178 4 78 351 74 334 2.54e-24 106
Msa0248600 AT1G08900.1 36.538 104 65 1 452 555 358 460 8.69e-13 71.2
Msa0248600 AT1G08900.2 29.818 275 178 4 78 351 74 334 2.54e-24 106
Msa0248600 AT1G08900.2 36.538 104 65 1 452 555 358 460 8.69e-13 71.2
Msa0248600 AT1G08900.5 29.818 275 178 4 78 351 32 292 2.54e-24 106
Msa0248600 AT1G08900.5 36.538 104 65 1 452 555 316 418 8.94e-13 70.9
Msa0248600 AT4G04760.2 29.154 319 208 8 23 339 29 331 2.38e-23 103
Msa0248600 AT4G04760.2 36.275 102 64 1 452 553 364 464 2.84e-11 66.6
Msa0248600 AT3G20460.1 27.612 268 175 5 78 342 102 353 5.82e-23 102
Msa0248600 AT1G79820.5 25.911 247 123 4 122 368 87 273 3.50e-14 75.1
Msa0248600 AT4G35300.5 39.583 96 58 0 452 547 428 523 4.58e-14 75.5
Msa0248600 AT1G76430.1 24.276 449 261 16 5 393 1 430 1.39e-12 70.9

Find 122 sgRNAs with CRISPR-Local

Find 290 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAGGAAGTCCCTTTGTTTC+TGG 0.144531 2_2:+32943132 None:intergenic
AACAACCAACGGGGCGATTC+TGG 0.183516 2_2:+32944390 None:intergenic
CATATTCCTCTGTATCTTAA+TGG 0.207748 2_2:+32943306 None:intergenic
TAAACCTCTTCTTACTGTTT+TGG 0.262901 2_2:+32944099 None:intergenic
TTTCATTGGCTCAGTTGTTA+TGG 0.283431 2_2:-32945184 Msa0248600:CDS
CTTCGTCTTGCTTTCTCTGC+TGG 0.283773 2_2:-32947714 Msa0248600:CDS
CTATCATTGACTGATGCTAT+TGG 0.289689 2_2:-32943225 Msa0248600:CDS
TATATTGCAGGAGTCATATC+TGG 0.292199 2_2:-32947436 Msa0248600:intron
TTGTGCTTCTGCCGGTAATA+AGG 0.293595 2_2:-32943675 Msa0248600:intron
CAACAAAAGTTTCTTTCTTC+CGG 0.310092 2_2:+32943892 None:intergenic
CTTGCTTTCTCTGCTGGAAT+TGG 0.312834 2_2:-32947708 Msa0248600:CDS
TTTCTCTTTGGCTATGATAC+TGG 0.318446 2_2:-32947681 Msa0248600:intron
GCATCTCCAACTAGAGTTAG+AGG 0.333352 2_2:-32945063 Msa0248600:CDS
TCCAAAGCAGTTCTATAATC+AGG 0.333874 2_2:+32943752 None:intergenic
CATGGAACTGTTCCCATTCC+TGG 0.335209 2_2:+32943351 None:intergenic
AATGGTTGGCTAGCACTAAT+TGG 0.340967 2_2:-32943402 Msa0248600:CDS
TAGATGTTGCATGCTGGATT+AGG 0.342195 2_2:-32942975 Msa0248600:three_prime_UTR
TGGTGTTGGAATGGCTTCAA+TGG 0.344762 2_2:-32945109 Msa0248600:CDS
GATGCTTCTGAGATGTATAA+AGG 0.345808 2_2:+32945081 None:intergenic
TTGCCAAAACTTAAAATTCA+AGG 0.346391 2_2:+32943077 None:intergenic
GGTAGAGTCTTTGTTGGTCT+TGG 0.353726 2_2:-32945129 Msa0248600:CDS
CCCTGATTATAGAACTGCTT+TGG 0.353928 2_2:-32943753 Msa0248600:CDS
GTTTGAAGACGAATCGTCTT+TGG 0.354902 2_2:+32944150 None:intergenic
TTGATCTTCTGTTGTGTCAT+TGG 0.360078 2_2:+32943476 None:intergenic
GAATAGCATCAACATCAAAT+TGG 0.360652 2_2:-32943278 Msa0248600:CDS
ACAGCTGGAATTAATGCATT+TGG 0.366265 2_2:-32943947 Msa0248600:CDS
AAAGCAGAGACATCAGCTTC+AGG 0.373152 2_2:+32947777 None:intergenic
TGCTTTGGATGCTGCTCAAT+GGG 0.381660 2_2:-32943738 Msa0248600:CDS
AACATCCACCTCCATGTTCC+TGG 0.382267 2_2:+32944465 None:intergenic
GGATGGATCAACGATCGATT+TGG 0.391210 2_2:-32945243 Msa0248600:CDS
CCTTTCCTATGTTATCAACT+TGG 0.391524 2_2:-32944995 Msa0248600:CDS
GAGAATGAGTAGTAGTTTGA+TGG 0.394666 2_2:+32943819 None:intergenic
AACCTTTCTGAACAACCAAC+GGG 0.395585 2_2:+32944380 None:intergenic
AATCCAGCTATTCTCATTGT+TGG 0.399302 2_2:-32945150 Msa0248600:CDS
CCATTCCTGGTGAGAAGAAT+AGG 0.401944 2_2:+32943364 None:intergenic
GAGAATGTTTGTCTCTATCA+TGG 0.407356 2_2:-32947752 Msa0248600:CDS
ATTGTTGGTAGAGTCTTTGT+TGG 0.407548 2_2:-32945135 Msa0248600:CDS
ATTATTGTGCAGCTATTACC+TGG 0.408857 2_2:-32943513 Msa0248600:intron
GGAGCACTTGTTAGTCTCAA+TGG 0.411851 2_2:-32945042 Msa0248600:CDS
GAAGCACAAAATCCACATTC+AGG 0.414289 2_2:+32943689 None:intergenic
GTCTTTGTTGGTCTTGGTGT+TGG 0.414920 2_2:-32945123 Msa0248600:CDS
TGTTGGTCTTGGTGTTGGAA+TGG 0.433663 2_2:-32945118 Msa0248600:CDS
ATGTTCTCAACCTCTTCAAT+AGG 0.434255 2_2:+32943114 None:intergenic
GGATTGCATGAAATGTCTTA+AGG 0.435473 2_2:-32943717 Msa0248600:CDS
GCTTTCTCTGCTGGAATTGG+TGG 0.439243 2_2:-32947705 Msa0248600:CDS
ATGCTTCTGAGATGTATAAA+GGG 0.442480 2_2:+32945082 None:intergenic
GGAACATGGAGGTGGATGTT+AGG 0.444072 2_2:-32944462 Msa0248600:CDS
CCTATTCTTCTCACCAGGAA+TGG 0.445918 2_2:-32943364 Msa0248600:CDS
ATAGTGAGTACAGCACTTGC+AGG 0.446111 2_2:-32945291 Msa0248600:CDS
TGCAAGTGCTGTACTCACTA+TGG 0.452107 2_2:+32945293 None:intergenic
CAAATCTTCCAACAATTTGT+CGG 0.457080 2_2:-32944058 Msa0248600:CDS
CTCAATGGATTTCTCATCAC+TGG 0.458618 2_2:-32945027 Msa0248600:CDS
ACAACCAACGGGGCGATTCT+GGG 0.459626 2_2:+32944391 None:intergenic
TCTAAAAGAATCAGTCGAAA+TGG 0.461701 2_2:-32944176 Msa0248600:CDS
GCACTTGCAGGAGCAATCAT+AGG 0.463105 2_2:-32945279 Msa0248600:CDS
ATTTCATCTTCAACATCTTG+TGG 0.465872 2_2:+32944205 None:intergenic
AAAGCAAGACGAAGAACATA+AGG 0.466895 2_2:+32947723 None:intergenic
AAGCAGAGACATCAGCTTCA+GGG 0.467694 2_2:+32947778 None:intergenic
GCCCCGTTGGTTGTTCAGAA+AGG 0.467718 2_2:-32944382 Msa0248600:intron
GTATATAAGAGATGATTTCA+AGG 0.469865 2_2:-32947404 Msa0248600:CDS
CTATTCTTCTCACCAGGAAT+GGG 0.473967 2_2:-32943363 Msa0248600:CDS
ATTTCAGAGTTTACAACCCA+TGG 0.480742 2_2:+32943333 None:intergenic
CCAACCATCGTTCAACTAGC+TGG 0.480899 2_2:-32944010 Msa0248600:CDS
CTGCTTTGGATGCTGCTCAA+TGG 0.483187 2_2:-32943739 Msa0248600:CDS
CTACCAACAATGAGAATAGC+TGG 0.488214 2_2:+32945147 None:intergenic
CTTCTGTCACTTGTCACAGC+TGG 0.488504 2_2:-32943962 Msa0248600:CDS
GTTAGGTGTTGCAGCAGTAC+CGG 0.491713 2_2:-32944445 Msa0248600:CDS
TAGAAAGCGTGCTAGTCAAA+AGG 0.492666 2_2:+32947919 None:intergenic
AGTGCTCCTCTAACTCTAGT+TGG 0.492861 2_2:+32945057 None:intergenic
GTAAGAAGAGGTTTATATGC+AGG 0.494340 2_2:-32944091 Msa0248600:CDS
TGTTAATTGTTGAAAATGGA+AGG 0.498558 2_2:-32947807 Msa0248600:exon
TGTTGATTCCGACAAATTGT+TGG 0.502638 2_2:+32944050 None:intergenic
AACTACTACTCATTCTCCTA+TGG 0.507137 2_2:-32943813 Msa0248600:CDS
GGTTGGACTGTAGTACATTA+CGG 0.509940 2_2:+32944027 None:intergenic
AAGAGATGATTTCAAGGCTG+TGG 0.514067 2_2:-32947398 Msa0248600:CDS
ATACTATTTGTTCAGGCACC+AGG 0.520848 2_2:-32944483 Msa0248600:intron
CAGGAATGGGAACAGTTCCA+TGG 0.531089 2_2:-32943350 Msa0248600:CDS
ATATTGCAGGAGTCATATCT+GGG 0.531606 2_2:-32947435 Msa0248600:intron
TTGTTCAGGCACCAGGAACA+TGG 0.534777 2_2:-32944476 Msa0248600:intron
CTTAAGGCTTCTCCTGAATG+TGG 0.537074 2_2:-32943701 Msa0248600:CDS
TTATTGTGCAGCTATTACCT+GGG 0.538946 2_2:-32943512 Msa0248600:intron
CATCTTCAACATCTTGTGGA+GGG 0.542544 2_2:+32944209 None:intergenic
ATGAGTTAGATGTTGCATGC+TGG 0.547138 2_2:-32942981 Msa0248600:three_prime_UTR
TGCTCCCAGAATCGCCCCGT+TGG 0.552374 2_2:-32944395 Msa0248600:CDS
GTTTCAATTTCACTAACCAT+AGG 0.554411 2_2:+32943797 None:intergenic
TAACCTTTCTGAACAACCAA+CGG 0.556181 2_2:+32944379 None:intergenic
TTAAGATACAGAGGAATATG+TGG 0.557495 2_2:-32943303 Msa0248600:CDS
TGAAGAGGTTGAGAACATGT+TGG 0.558714 2_2:-32943109 Msa0248600:CDS
ATCATAGGTGCATCAGTTGG+TGG 0.558750 2_2:-32945264 Msa0248600:CDS
AATACGATTTGTGTTAAAGC+CGG 0.560109 2_2:+32944426 None:intergenic
AGGCACCAGGAACATGGAGG+TGG 0.563216 2_2:-32944470 Msa0248600:CDS
TAGGTGCATCAGTTGGTGGA+TGG 0.568470 2_2:-32945260 Msa0248600:CDS
CCAAAGCAGTTCTATAATCA+GGG 0.569226 2_2:+32943753 None:intergenic
CCAGCTAGTTGAACGATGGT+TGG 0.571403 2_2:+32944010 None:intergenic
AAAGGGACTTCCTATTGAAG+AGG 0.575338 2_2:-32943124 Msa0248600:CDS
AATGGATTTCTCATCACTGG+TGG 0.583065 2_2:-32945024 Msa0248600:CDS
GGATAGACAAACTTGGCTGC+AGG 0.583346 2_2:-32947377 Msa0248600:intron
TCATCTTCAACATCTTGTGG+AGG 0.583395 2_2:+32944208 None:intergenic
CCAAGTTGATAACATAGGAA+AGG 0.589390 2_2:+32944995 None:intergenic
TGTAACAAGTTATTATGTGA+TGG 0.592363 2_2:-32942877 Msa0248600:three_prime_UTR
AAAACCAAAACAGTAAGAAG+AGG 0.592751 2_2:-32944103 Msa0248600:CDS
AAGAGGTTTATATGCAGGAG+TGG 0.592816 2_2:-32944086 Msa0248600:CDS
AGGAATGGGAACAGTTCCAT+GGG 0.596384 2_2:-32943349 Msa0248600:CDS
TACATCCTATTCTTCTCACC+AGG 0.604815 2_2:-32943369 Msa0248600:CDS
GAATGCCAAGTTGATAACAT+AGG 0.609558 2_2:+32944990 None:intergenic
AGAGGTTTATATGCAGGAGT+GGG 0.619234 2_2:-32944085 Msa0248600:CDS
GGATCAACGATCGATTTGGA+AGG 0.624011 2_2:-32945239 Msa0248600:CDS
GCAATCATAGGTGCATCAGT+TGG 0.630415 2_2:-32945267 Msa0248600:CDS
TAATTGTTGAAAATGGAAGG+AGG 0.631537 2_2:-32947804 Msa0248600:exon
AACAAGAGAGACAATAACAC+CGG 0.634530 2_2:+32943859 None:intergenic
TGCTTCTGAGATGTATAAAG+GGG 0.637478 2_2:+32945083 None:intergenic
TTGGATATCAGACATGCCCC+AGG 0.638173 2_2:+32943495 None:intergenic
AGCAGTATATAAGAAACTGA+AGG 0.641158 2_2:+32947832 None:intergenic
AGGCTGTGGATAGACAAACT+TGG 0.642933 2_2:-32947384 Msa0248600:CDS
AGTCGACAATGGTACACAAG+AGG 0.654966 2_2:-32943438 Msa0248600:CDS
AGATACAGAGGAATATGTGG+AGG 0.659965 2_2:-32943300 Msa0248600:CDS
TATTGTGCAGCTATTACCTG+GGG 0.660927 2_2:-32943511 Msa0248600:intron
ATATATCCATTAAGATACAG+AGG 0.661567 2_2:-32943312 Msa0248600:CDS
TTCAGGCACCAGGAACATGG+AGG 0.710504 2_2:-32944473 Msa0248600:intron
ACCTTTCTGAACAACCAACG+GGG 0.711240 2_2:+32944381 None:intergenic
AAAACCAGCTAGTTGAACGA+TGG 0.712111 2_2:+32944006 None:intergenic
TATTGCAGGAGTCATATCTG+GGG 0.745900 2_2:-32947434 Msa0248600:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTGTTTGTTTTAT+TGG + chr2_2:32942917-32942936 None:intergenic 10.0%
!! ATATATTATGGTTTAATAAA+AGG - chr2_2:32943672-32943691 Msa0248600:intron 10.0%
!!! TAATCAATCTTTTTTTATAA+AGG + chr2_2:32944087-32944106 None:intergenic 10.0%
!!! TTTTCCAATATTTATTTTTT+TGG - chr2_2:32945092-32945111 Msa0248600:CDS 10.0%
!! TTGTATTTAATTATGTATTA+GGG + chr2_2:32945127-32945146 None:intergenic 10.0%
!! TTTGTATTTAATTATGTATT+AGG + chr2_2:32945128-32945147 None:intergenic 10.0%
!! TATTATAGACCAAATATATT+TGG - chr2_2:32943510-32943529 Msa0248600:intron 15.0%
!!! TAATTTTTTAGATGCAATAA+AGG + chr2_2:32943781-32943800 None:intergenic 15.0%
!! TCAATTCAGTATATTATATA+CGG - chr2_2:32943921-32943940 Msa0248600:CDS 15.0%
!!! CTAACAAATTATTATTTTCA+TGG + chr2_2:32944304-32944323 None:intergenic 15.0%
!!! CATGAAAATAATAATTTGTT+AGG - chr2_2:32944302-32944321 Msa0248600:intron 15.0%
!! ACAAAATAAAATCTACAAAA+TGG + chr2_2:32944647-32944666 None:intergenic 15.0%
!!! TTCTTTTGTTTTTATTATTG+AGG - chr2_2:32944726-32944745 Msa0248600:intron 15.0%
!!! TCTTTTGTTTTTATTATTGA+GGG - chr2_2:32944727-32944746 Msa0248600:intron 15.0%
!!! TGATATGTTTTATTTTCAAA+AGG - chr2_2:32944915-32944934 Msa0248600:intron 15.0%
!!! GATATGTTTTATTTTCAAAA+GGG - chr2_2:32944916-32944935 Msa0248600:intron 15.0%
!! TACACCAAAAAAATAAATAT+TGG + chr2_2:32945099-32945118 None:intergenic 15.0%
!!! TTCTCTAAAAATATTTGATT+TGG - chr2_2:32947850-32947869 Msa0248600:five_prime_UTR 15.0%
!!! TCTCTAAAAATATTTGATTT+GGG - chr2_2:32947851-32947870 Msa0248600:five_prime_UTR 15.0%
!!! CTTTTGTTAATTGTTGAAAA+TGG - chr2_2:32942966-32942985 Msa0248600:three_prime_UTR 20.0%
!!! TTAAGCTTTAGTTAGTAATA+TGG + chr2_2:32943188-32943207 None:intergenic 20.0%
!!! ATTAATTAATGATGGGTATT+TGG - chr2_2:32943317-32943336 Msa0248600:CDS 20.0%
!!! TTAATTAATGATGGGTATTT+GGG - chr2_2:32943318-32943337 Msa0248600:CDS 20.0%
!! AGTTAGTTATATATTTCCTT+CGG - chr2_2:32943437-32943456 Msa0248600:CDS 20.0%
!! CATTGAATACCAAATATATT+TGG + chr2_2:32943522-32943541 None:intergenic 20.0%
!!! CAATTTTAAGTTGTTTCTAT+AGG - chr2_2:32943884-32943903 Msa0248600:CDS 20.0%
!!! ATTTCCATATTTTTTCTTCT+TGG + chr2_2:32943957-32943976 None:intergenic 20.0%
!! ATTGTAATAAAAAACATCAG+TGG + chr2_2:32944016-32944035 None:intergenic 20.0%
!!! ATCATTTGAGTTAAGTTTAT+GGG + chr2_2:32944397-32944416 None:intergenic 20.0%
!!! TATCATTTGAGTTAAGTTTA+TGG + chr2_2:32944398-32944417 None:intergenic 20.0%
!!! AAGTTTTTTGTGTTTCTTTT+TGG + chr2_2:32944470-32944489 None:intergenic 20.0%
!! AATGGATAAATATTGTCTAA+CGG + chr2_2:32944808-32944827 None:intergenic 20.0%
!!! TGTTGGTAACAATTTTAAAA+TGG + chr2_2:32944826-32944845 None:intergenic 20.0%
!! AACATGATTAAAATCATTCA+TGG - chr2_2:32945234-32945253 Msa0248600:CDS 20.0%
!!! TTTGACAATTTGTTTATAAG+TGG + chr2_2:32945307-32945326 None:intergenic 20.0%
!! GAACTTATTAATTAAGTGAA+AGG - chr2_2:32945369-32945388 Msa0248600:intron 20.0%
!!! TTAATTGATGTTGATAAATC+AGG - chr2_2:32945458-32945477 Msa0248600:intron 20.0%
!!! ATGAAAATGGTTTTATCAAT+TGG + chr2_2:32945997-32946016 None:intergenic 20.0%
!! TTATATGTTAAACGAAAAAC+AGG - chr2_2:32946505-32946524 Msa0248600:intron 20.0%
!! TATATGTTAAACGAAAAACA+GGG - chr2_2:32946506-32946525 Msa0248600:intron 20.0%
!!! ATATATTTTATTGACAAGAC+CGG - chr2_2:32946866-32946885 Msa0248600:intron 20.0%
!! AAAAAATGTTACCTTATTAC+CGG + chr2_2:32947116-32947135 None:intergenic 20.0%
!!! CACTTAGTATTTTATTTGAA+AGG + chr2_2:32947149-32947168 None:intergenic 20.0%
!! AAAAACAATGACAAAAACAA+TGG + chr2_2:32947622-32947641 None:intergenic 20.0%
! TGTTAATTGTTGAAAATGGA+AGG - chr2_2:32942970-32942989 Msa0248600:three_prime_UTR 25.0%
! GTATATAAGAGATGATTTCA+AGG - chr2_2:32943373-32943392 Msa0248600:CDS 25.0%
!! TTTTTCCCTATTAATGTGAT+TGG - chr2_2:32943545-32943564 Msa0248600:intron 25.0%
! TAACTCCAATCACATTAATA+GGG + chr2_2:32943553-32943572 None:intergenic 25.0%
!!! GTATCTTTATCCATTTTAGT+TGG - chr2_2:32943573-32943592 Msa0248600:intron 25.0%
!!! AATTTAACCATTAGCTTTGA+TGG - chr2_2:32943639-32943658 Msa0248600:intron 25.0%
! GGAATAGTTAGGATATATTA+TGG - chr2_2:32943660-32943679 Msa0248600:intron 25.0%
!!! AGATGCAATAAAGGTATTTT+TGG + chr2_2:32943772-32943791 None:intergenic 25.0%
! AAGGTAAAATGGTTATAAAG+GGG + chr2_2:32943814-32943833 None:intergenic 25.0%
! CAAGGTAAAATGGTTATAAA+GGG + chr2_2:32943815-32943834 None:intergenic 25.0%
!!! TAGTTTTTTATTGGCATCAA+TGG + chr2_2:32943838-32943857 None:intergenic 25.0%
!!! TGCTTGTGTTAGTTTTTTAT+TGG + chr2_2:32943847-32943866 None:intergenic 25.0%
! AAATTGAGAAAACTATCACA+AGG + chr2_2:32943870-32943889 None:intergenic 25.0%
! TATAATATACTGAATTGACC+AGG + chr2_2:32943919-32943938 None:intergenic 25.0%
! AAAGCCAAGAAGAAAAAATA+TGG - chr2_2:32943950-32943969 Msa0248600:CDS 25.0%
!! ACATTTTATAAACCAAGATG+TGG + chr2_2:32944121-32944140 None:intergenic 25.0%
!! TCATTTGAGTTAAGTTTATG+GGG + chr2_2:32944396-32944415 None:intergenic 25.0%
!! TATGATAGTATGCTTTTGTA+AGG - chr2_2:32944489-32944508 Msa0248600:intron 25.0%
! TCACTTACTCAATCAAATAA+GGG - chr2_2:32944528-32944547 Msa0248600:intron 25.0%
! ACAAAATGGTTTGAGAAATA+AGG + chr2_2:32944633-32944652 None:intergenic 25.0%
!! TTTGATGTTCTGAATTTAGA+AGG + chr2_2:32944770-32944789 None:intergenic 25.0%
! TACCAACATAAATTATGTAG+TGG - chr2_2:32944838-32944857 Msa0248600:intron 25.0%
!! CACTTTTGACACATTTATAT+AGG - chr2_2:32945022-32945041 Msa0248600:CDS 25.0%
!! TTTTGACACATTTATATAGG+AGG - chr2_2:32945025-32945044 Msa0248600:CDS 25.0%
!!! GTTAGTTTTACCATCTAAAA+AGG + chr2_2:32945217-32945236 None:intergenic 25.0%
! ATTAAAATCATTCATGGACA+CGG - chr2_2:32945240-32945259 Msa0248600:CDS 25.0%
! AGTGAAAGGTAAATAAGATA+AGG - chr2_2:32945383-32945402 Msa0248600:intron 25.0%
! TCGAAAATATGTCATGAAAA+TGG + chr2_2:32946010-32946029 None:intergenic 25.0%
! GCTAAGTATTAGACATATTT+GGG - chr2_2:32946188-32946207 Msa0248600:intron 25.0%
! TTGTTTGATACTATTTGTTC+AGG - chr2_2:32946287-32946306 Msa0248600:intron 25.0%
! TGCTTTACTTAACTTTCATT+TGG - chr2_2:32946481-32946500 Msa0248600:intron 25.0%
!! AAGAAGCTAAAGAAATTTTG+AGG - chr2_2:32946537-32946556 Msa0248600:intron 25.0%
! GACAATACATAATATATGCA+AGG - chr2_2:32947201-32947220 Msa0248600:intron 25.0%
!! TCAGTATTGTTATTAGACAT+TGG + chr2_2:32947245-32947264 None:intergenic 25.0%
! ATATATCCATTAAGATACAG+AGG - chr2_2:32947465-32947484 Msa0248600:intron 25.0%
!!! GAACCTTGAATTTTAAGTTT+TGG - chr2_2:32947697-32947716 Msa0248600:CDS 25.0%
! TTGCCAAAACTTAAAATTCA+AGG + chr2_2:32947703-32947722 None:intergenic 25.0%
!!! TGAATTTTAAGTTTTGGCAA+AGG - chr2_2:32947703-32947722 Msa0248600:CDS 25.0%
! TGTAACAAGTTATTATGTGA+TGG - chr2_2:32947900-32947919 Msa0248600:five_prime_UTR 25.0%
! CTAGTCTCTTCTACATTTTA+TGG - chr2_2:32942878-32942897 Msa0248600:three_prime_UTR 30.0%
AGCAGTATATAAGAAACTGA+AGG + chr2_2:32942948-32942967 None:intergenic 30.0%
TAATTGTTGAAAATGGAAGG+AGG - chr2_2:32942973-32942992 Msa0248600:three_prime_UTR 30.0%
!! ACAATAAAAAGTGTTAGAGC+TGG - chr2_2:32943292-32943311 Msa0248600:CDS 30.0%
AGCTGGTGATTAATTAATGA+TGG - chr2_2:32943309-32943328 Msa0248600:CDS 30.0%
GCTGGTGATTAATTAATGAT+GGG - chr2_2:32943310-32943329 Msa0248600:CDS 30.0%
!!! TTTTTTATGAATGAGACCGA+AGG + chr2_2:32943456-32943475 None:intergenic 30.0%
CTAACTCCAATCACATTAAT+AGG + chr2_2:32943554-32943573 None:intergenic 30.0%
AACTATTCCATCAAAGCTAA+TGG + chr2_2:32943649-32943668 None:intergenic 30.0%
!! TTAGCTTTGATGGAATAGTT+AGG - chr2_2:32943649-32943668 Msa0248600:intron 30.0%
CATATAATAATCTCTCGAGT+CGG + chr2_2:32943742-32943761 None:intergenic 30.0%
GCAAGGTAAAATGGTTATAA+AGG + chr2_2:32943816-32943835 None:intergenic 30.0%
!!! AAACTTTTTCATCCACATCT+TGG - chr2_2:32944106-32944125 Msa0248600:CDS 30.0%
CAACATATATCATGTACTCA+TGG + chr2_2:32944221-32944240 None:intergenic 30.0%
CATGAGTACATGATATATGT+TGG - chr2_2:32944219-32944238 Msa0248600:CDS 30.0%
! TTCTTTGGTCTGTATTTTCA+AGG + chr2_2:32944257-32944276 None:intergenic 30.0%
TGCATAATATATGCAAGATC+CGG - chr2_2:32944425-32944444 Msa0248600:CDS 30.0%
! ATAGTATGCTTTTGTAAGGT+TGG - chr2_2:32944493-32944512 Msa0248600:intron 30.0%
CTCACTTACTCAATCAAATA+AGG - chr2_2:32944527-32944546 Msa0248600:intron 30.0%
! TGTCTAACACCTTGAATTTT+TGG - chr2_2:32944569-32944588 Msa0248600:intron 30.0%
! GTCTAACACCTTGAATTTTT+GGG - chr2_2:32944570-32944589 Msa0248600:intron 30.0%
AACTATTGCCCAAAAATTCA+AGG + chr2_2:32944581-32944600 None:intergenic 30.0%
AAATATTGTCTAACGGTCTA+CGG + chr2_2:32944801-32944820 None:intergenic 30.0%
TGCCACTACATAATTTATGT+TGG + chr2_2:32944843-32944862 None:intergenic 30.0%
AAATTATGTAGTGGCAAAGA+TGG - chr2_2:32944847-32944866 Msa0248600:intron 30.0%
AATTATGTAGTGGCAAAGAT+GGG - chr2_2:32944848-32944867 Msa0248600:intron 30.0%
CACATTTATATAGGAGGAAT+AGG - chr2_2:32945031-32945050 Msa0248600:CDS 30.0%
TAGGAGGAATAGGATTAATA+AGG - chr2_2:32945041-32945060 Msa0248600:CDS 30.0%
AAAAATTACGCATAAGTCGA+AGG - chr2_2:32945163-32945182 Msa0248600:CDS 30.0%
TATTGTTATACATGATCGTC+AGG - chr2_2:32945274-32945293 Msa0248600:CDS 30.0%
!! ATGCTTCTGAGATGTATAAA+GGG + chr2_2:32945698-32945717 None:intergenic 30.0%
!! CGGTTTTATAAAGTTGAGTT+AGG + chr2_2:32945824-32945843 None:intergenic 30.0%
TTTAAGTGTGTTTATGAGTC+AGG + chr2_2:32945866-32945885 None:intergenic 30.0%
TATGCAGTTCTCATTGTAAA+AGG + chr2_2:32945924-32945943 None:intergenic 30.0%
TGCATATTTGTAGTGTGATT+CGG - chr2_2:32945938-32945957 Msa0248600:intron 30.0%
TGTTAGAATCAGCAATATCA+AGG + chr2_2:32946097-32946116 None:intergenic 30.0%
ATAGAAACTATTTAGATCCG+AGG - chr2_2:32946134-32946153 Msa0248600:intron 30.0%
GGCTAAGTATTAGACATATT+TGG - chr2_2:32946187-32946206 Msa0248600:intron 30.0%
AATACGATTTGTGTTAAAGC+CGG + chr2_2:32946354-32946373 None:intergenic 30.0%
AAATAGATTACATGCAGTCA+TGG + chr2_2:32946440-32946459 None:intergenic 30.0%
ATTTCATCTTCAACATCTTG+TGG + chr2_2:32946575-32946594 None:intergenic 30.0%
TCTAAAAGAATCAGTCGAAA+TGG - chr2_2:32946601-32946620 Msa0248600:intron 30.0%
AAAACCAAAACAGTAAGAAG+AGG - chr2_2:32946674-32946693 Msa0248600:intron 30.0%
! TAAACCTCTTCTTACTGTTT+TGG + chr2_2:32946681-32946700 None:intergenic 30.0%
CAAATCTTCCAACAATTTGT+CGG - chr2_2:32946719-32946738 Msa0248600:intron 30.0%
!! TGGTTTTGCATCAAACAAAA+CGG - chr2_2:32946787-32946806 Msa0248600:intron 30.0%
CAACAAAAGTTTCTTTCTTC+CGG + chr2_2:32946888-32946907 None:intergenic 30.0%
!!! CTTTTGTTGTTTAGTTTGTC+CGG - chr2_2:32946899-32946918 Msa0248600:intron 30.0%
GTTTCAATTTCACTAACCAT+AGG + chr2_2:32946983-32947002 None:intergenic 30.0%
TACATAATATATGCAAGGTC+CGG - chr2_2:32947206-32947225 Msa0248600:intron 30.0%
CATATTCCTCTGTATCTTAA+TGG + chr2_2:32947474-32947493 None:intergenic 30.0%
TTAAGATACAGAGGAATATG+TGG - chr2_2:32947474-32947493 Msa0248600:intron 30.0%
GAATAGCATCAACATCAAAT+TGG - chr2_2:32947499-32947518 Msa0248600:intron 30.0%
GAGAATGTTTGTCTCTATCA+TGG - chr2_2:32943025-32943044 Msa0248600:exon 35.0%
AAAGCAAGACGAAGAACATA+AGG + chr2_2:32943057-32943076 None:intergenic 35.0%
TTTCTCTTTGGCTATGATAC+TGG - chr2_2:32943096-32943115 Msa0248600:CDS 35.0%
TATATTGCAGGAGTCATATC+TGG - chr2_2:32943341-32943360 Msa0248600:CDS 35.0%
ATATTGCAGGAGTCATATCT+GGG - chr2_2:32943342-32943361 Msa0248600:CDS 35.0%
CATAGTGTGTCCAACTAAAA+TGG + chr2_2:32943586-32943605 None:intergenic 35.0%
CGAGTCGGATAATATTGTAT+CGG + chr2_2:32943727-32943746 None:intergenic 35.0%
! TTTTATTGGCATCAATGGCA+AGG + chr2_2:32943833-32943852 None:intergenic 35.0%
TTCTATAGGAAAACGTAACC+TGG - chr2_2:32943898-32943917 Msa0248600:CDS 35.0%
GCATAATATATGCAAGATCC+GGG - chr2_2:32944426-32944445 Msa0248600:CDS 35.0%
CATAATATATGCAAGATCCG+GGG - chr2_2:32944427-32944446 Msa0248600:CDS 35.0%
TACTCAATCAAATAAGGGTG+TGG - chr2_2:32944533-32944552 Msa0248600:intron 35.0%
! ATTCAAGGTGTTAGACAGTT+CGG + chr2_2:32944566-32944585 None:intergenic 35.0%
!! ATTTTTGGGCAATAGTTGTG+TGG - chr2_2:32944584-32944603 Msa0248600:intron 35.0%
TACCATCTAAAAAGGCTTAG+CGG + chr2_2:32945209-32945228 None:intergenic 35.0%
!! TTTCATTGGCTCAGTTGTTA+TGG - chr2_2:32945593-32945612 Msa0248600:intron 35.0%
AATCCAGCTATTCTCATTGT+TGG - chr2_2:32945627-32945646 Msa0248600:intron 35.0%
! ATTGTTGGTAGAGTCTTTGT+TGG - chr2_2:32945642-32945661 Msa0248600:intron 35.0%
!! TGCTTCTGAGATGTATAAAG+GGG + chr2_2:32945697-32945716 None:intergenic 35.0%
!! GATGCTTCTGAGATGTATAA+AGG + chr2_2:32945699-32945718 None:intergenic 35.0%
!! CCAAGTTGATAACATAGGAA+AGG + chr2_2:32945785-32945804 None:intergenic 35.0%
CCTTTCCTATGTTATCAACT+TGG - chr2_2:32945782-32945801 Msa0248600:intron 35.0%
!! GAATGCCAAGTTGATAACAT+AGG + chr2_2:32945790-32945809 None:intergenic 35.0%
! TATTTGTAGTGTGATTCGGA+TGG - chr2_2:32945942-32945961 Msa0248600:intron 35.0%
TTCTATTAGGTCACCTCAAT+TGG + chr2_2:32945969-32945988 None:intergenic 35.0%
AATTGAGGTGACCTAATAGA+AGG - chr2_2:32945968-32945987 Msa0248600:intron 35.0%
TCAATTGGTCACCTTCTATT+AGG + chr2_2:32945982-32946001 None:intergenic 35.0%
TAACCTTTCTGAACAACCAA+CGG + chr2_2:32946401-32946420 None:intergenic 35.0%
GTAAGAAGAGGTTTATATGC+AGG - chr2_2:32946686-32946705 Msa0248600:intron 35.0%
!! TGTTGATTCCGACAAATTGT+TGG + chr2_2:32946730-32946749 None:intergenic 35.0%
ACAGCTGGAATTAATGCATT+TGG - chr2_2:32946830-32946849 Msa0248600:intron 35.0%
AACAAGAGAGACAATAACAC+CGG + chr2_2:32946921-32946940 None:intergenic 35.0%
GAGAATGAGTAGTAGTTTGA+TGG + chr2_2:32946961-32946980 None:intergenic 35.0%
AACTACTACTCATTCTCCTA+TGG - chr2_2:32946964-32946983 Msa0248600:intron 35.0%
CCAAAGCAGTTCTATAATCA+GGG + chr2_2:32947027-32947046 None:intergenic 35.0%
TCCAAAGCAGTTCTATAATC+AGG + chr2_2:32947028-32947047 None:intergenic 35.0%
GGATTGCATGAAATGTCTTA+AGG - chr2_2:32947060-32947079 Msa0248600:intron 35.0%
ACATAATATATGCAAGGTCC+GGG - chr2_2:32947207-32947226 Msa0248600:intron 35.0%
ATTATTGTGCAGCTATTACC+TGG - chr2_2:32947264-32947283 Msa0248600:intron 35.0%
TTATTGTGCAGCTATTACCT+GGG - chr2_2:32947265-32947284 Msa0248600:intron 35.0%
TTGATCTTCTGTTGTGTCAT+TGG + chr2_2:32947304-32947323 None:intergenic 35.0%
!!! ATTGTCGACTTTGCTCTTTT+TGG + chr2_2:32947329-32947348 None:intergenic 35.0%
ATTTCAGAGTTTACAACCCA+TGG + chr2_2:32947447-32947466 None:intergenic 35.0%
! CTATCATTGACTGATGCTAT+TGG - chr2_2:32947552-32947571 Msa0248600:intron 35.0%
!! TGTTTTTGTGCCAGAAACAA+AGG - chr2_2:32947635-32947654 Msa0248600:intron 35.0%
! GTTTTTGTGCCAGAAACAAA+GGG - chr2_2:32947636-32947655 Msa0248600:intron 35.0%
ATGTTCTCAACCTCTTCAAT+AGG + chr2_2:32947666-32947685 None:intergenic 35.0%
! TAGAAAGCGTGCTAGTCAAA+AGG + chr2_2:32942861-32942880 None:intergenic 40.0%
!! GGAATTGGTGGTTTTCTCTT+TGG - chr2_2:32943084-32943103 Msa0248600:CDS 40.0%
TGGGTATTTGGGTATATTGC+AGG - chr2_2:32943329-32943348 Msa0248600:CDS 40.0%
TATTGCAGGAGTCATATCTG+GGG - chr2_2:32943343-32943362 Msa0248600:CDS 40.0%
AAGAGATGATTTCAAGGCTG+TGG - chr2_2:32943379-32943398 Msa0248600:CDS 40.0%
GTCGGATAATATTGTATCGG+AGG + chr2_2:32943724-32943743 None:intergenic 40.0%
GCATCAATGGCAAGGTAAAA+TGG + chr2_2:32943825-32943844 None:intergenic 40.0%
! TTCAAGGTGTTAGACAGTTC+GGG + chr2_2:32944565-32944584 None:intergenic 40.0%
! CTTTTGCATAAGATCAGCAG+AGG + chr2_2:32944982-32945001 None:intergenic 40.0%
!! GCAGATGCACTCTTTTTCAT+TGG - chr2_2:32945579-32945598 Msa0248600:intron 40.0%
CTACCAACAATGAGAATAGC+TGG + chr2_2:32945633-32945652 None:intergenic 40.0%
! CTCAATGGATTTCTCATCAC+TGG - chr2_2:32945750-32945769 Msa0248600:intron 40.0%
! AATGGATTTCTCATCACTGG+TGG - chr2_2:32945753-32945772 Msa0248600:intron 40.0%
GACACTGACGACATACATAT+CGG + chr2_2:32945844-32945863 None:intergenic 40.0%
AATCGATGTGACCTTTATCG+CGG - chr2_2:32946062-32946081 Msa0248600:intron 40.0%
TAAGATGATGAGTCACACCT+CGG + chr2_2:32946154-32946173 None:intergenic 40.0%
AGGTGTGACTCATCATCTTA+GGG - chr2_2:32946154-32946173 Msa0248600:intron 40.0%
ATCATCTTAGGGAGATCCAT+CGG - chr2_2:32946165-32946184 Msa0248600:intron 40.0%
ATGTCTAATACTTAGCCCGA+TGG + chr2_2:32946184-32946203 None:intergenic 40.0%
ATACTATTTGTTCAGGCACC+AGG - chr2_2:32946294-32946313 Msa0248600:intron 40.0%
AACCTTTCTGAACAACCAAC+GGG + chr2_2:32946400-32946419 None:intergenic 40.0%
CATCTTCAACATCTTGTGGA+GGG + chr2_2:32946571-32946590 None:intergenic 40.0%
TCATCTTCAACATCTTGTGG+AGG + chr2_2:32946572-32946591 None:intergenic 40.0%
GTTTGAAGACGAATCGTCTT+TGG + chr2_2:32946630-32946649 None:intergenic 40.0%
AAGAGGTTTATATGCAGGAG+TGG - chr2_2:32946691-32946710 Msa0248600:intron 40.0%
AGAGGTTTATATGCAGGAGT+GGG - chr2_2:32946692-32946711 Msa0248600:intron 40.0%
GGTTGGACTGTAGTACATTA+CGG + chr2_2:32946753-32946772 None:intergenic 40.0%
AAAACCAGCTAGTTGAACGA+TGG + chr2_2:32946774-32946793 None:intergenic 40.0%
CCCTGATTATAGAACTGCTT+TGG - chr2_2:32947024-32947043 Msa0248600:intron 40.0%
GAAGCACAAAATCCACATTC+AGG + chr2_2:32947091-32947110 None:intergenic 40.0%
TATTGTGCAGCTATTACCTG+GGG - chr2_2:32947266-32947285 Msa0248600:intron 40.0%
AGAGGATGTCCAAGCAAAAA+TGG - chr2_2:32947357-32947376 Msa0248600:intron 40.0%
GATGTCCAAGCAAAAATGGT+TGG - chr2_2:32947361-32947380 Msa0248600:intron 40.0%
! AATGGTTGGCTAGCACTAAT+TGG - chr2_2:32947375-32947394 Msa0248600:intron 40.0%
TACATCCTATTCTTCTCACC+AGG - chr2_2:32947408-32947427 Msa0248600:CDS 40.0%
CTATTCTTCTCACCAGGAAT+GGG - chr2_2:32947414-32947433 Msa0248600:CDS 40.0%
AGATACAGAGGAATATGTGG+AGG - chr2_2:32947477-32947496 Msa0248600:intron 40.0%
! ATAGGAAGTCCCTTTGTTTC+TGG + chr2_2:32947648-32947667 None:intergenic 40.0%
AAAGGGACTTCCTATTGAAG+AGG - chr2_2:32947653-32947672 Msa0248600:intron 40.0%
TGAAGAGGTTGAGAACATGT+TGG - chr2_2:32947668-32947687 Msa0248600:intron 40.0%
ATGAGTTAGATGTTGCATGC+TGG - chr2_2:32947796-32947815 Msa0248600:exon 40.0%
TAGATGTTGCATGCTGGATT+AGG - chr2_2:32947802-32947821 Msa0248600:exon 40.0%
AAGCAGAGACATCAGCTTCA+GGG + chr2_2:32943002-32943021 None:intergenic 45.0%
AAAGCAGAGACATCAGCTTC+AGG + chr2_2:32943003-32943022 None:intergenic 45.0%
CTTGCTTTCTCTGCTGGAAT+TGG - chr2_2:32943069-32943088 Msa0248600:CDS 45.0%
AGGCTGTGGATAGACAAACT+TGG - chr2_2:32943393-32943412 Msa0248600:CDS 45.0%
! TGTATCGGAGGAAGCATGAT+TGG + chr2_2:32943712-32943731 None:intergenic 45.0%
! TGCAAGTGCTGTACTCACTA+TGG + chr2_2:32945487-32945506 None:intergenic 45.0%
ATAGTGAGTACAGCACTTGC+AGG - chr2_2:32945486-32945505 Msa0248600:intron 45.0%
GCAATCATAGGTGCATCAGT+TGG - chr2_2:32945510-32945529 Msa0248600:intron 45.0%
ATCATAGGTGCATCAGTTGG+TGG - chr2_2:32945513-32945532 Msa0248600:intron 45.0%
GGATGGATCAACGATCGATT+TGG - chr2_2:32945534-32945553 Msa0248600:intron 45.0%
!! GGATCAACGATCGATTTGGA+AGG - chr2_2:32945538-32945557 Msa0248600:intron 45.0%
! GGTAGAGTCTTTGTTGGTCT+TGG - chr2_2:32945648-32945667 Msa0248600:intron 45.0%
!! GTCTTTGTTGGTCTTGGTGT+TGG - chr2_2:32945654-32945673 Msa0248600:intron 45.0%
!! TGTTGGTCTTGGTGTTGGAA+TGG - chr2_2:32945659-32945678 Msa0248600:intron 45.0%
! TGGTGTTGGAATGGCTTCAA+TGG - chr2_2:32945668-32945687 Msa0248600:intron 45.0%
GCATCTCCAACTAGAGTTAG+AGG - chr2_2:32945714-32945733 Msa0248600:intron 45.0%
AGTGCTCCTCTAACTCTAGT+TGG + chr2_2:32945723-32945742 None:intergenic 45.0%
! GGAGCACTTGTTAGTCTCAA+TGG - chr2_2:32945735-32945754 Msa0248600:intron 45.0%
! TGATTCGGATGGTCCAATTG+AGG - chr2_2:32945953-32945972 Msa0248600:intron 45.0%
GGTTTATGCAACCGCGATAA+AGG + chr2_2:32946076-32946095 None:intergenic 45.0%
GAGGTGTGACTCATCATCTT+AGG - chr2_2:32946153-32946172 Msa0248600:intron 45.0%
TCATCTTAGGGAGATCCATC+GGG - chr2_2:32946166-32946185 Msa0248600:intron 45.0%
ACCTTTCTGAACAACCAACG+GGG + chr2_2:32946399-32946418 None:intergenic 45.0%
ATGCAGTCATGGACGATGTT+AGG + chr2_2:32946429-32946448 None:intergenic 45.0%
! TGCTTTGGATGCTGCTCAAT+GGG - chr2_2:32947039-32947058 Msa0248600:intron 45.0%
CTTAAGGCTTCTCCTGAATG+TGG - chr2_2:32947076-32947095 Msa0248600:intron 45.0%
! TGTGGATTTTGTGCTTCTGC+CGG - chr2_2:32947094-32947113 Msa0248600:intron 45.0%
TTGTGCTTCTGCCGGTAATA+AGG - chr2_2:32947102-32947121 Msa0248600:intron 45.0%
!! GCTAGCCAACCATTTTTGCT+TGG + chr2_2:32947369-32947388 None:intergenic 45.0%
CCATTCCTGGTGAGAAGAAT+AGG + chr2_2:32947416-32947435 None:intergenic 45.0%
CCTATTCTTCTCACCAGGAA+TGG - chr2_2:32947413-32947432 Msa0248600:CDS 45.0%
AGGAATGGGAACAGTTCCAT+GGG - chr2_2:32947428-32947447 Msa0248600:CDS 45.0%
!!! TTATTTTTTATTTTATTCTT+TGG + chr2_2:32944272-32944291 None:intergenic 5.0%
!! TGTAATTATTAAAAATATAA+AGG + chr2_2:32944682-32944701 None:intergenic 5.0%
CTTCGTCTTGCTTTCTCTGC+TGG - chr2_2:32943063-32943082 Msa0248600:CDS 50.0%
GCTTTCTCTGCTGGAATTGG+TGG - chr2_2:32943072-32943091 Msa0248600:CDS 50.0%
GGATAGACAAACTTGGCTGC+AGG - chr2_2:32943400-32943419 Msa0248600:CDS 50.0%
TCGTGTCTAGATTCGAACCC+CGG + chr2_2:32944447-32944466 None:intergenic 50.0%
GGTGTTAGACAGTTCGGGAA+GGG + chr2_2:32944560-32944579 None:intergenic 50.0%
AGGTGTTAGACAGTTCGGGA+AGG + chr2_2:32944561-32944580 None:intergenic 50.0%
! CGCCGCTAAGCCTTTTTAGA+TGG - chr2_2:32945204-32945223 Msa0248600:CDS 50.0%
GCACTTGCAGGAGCAATCAT+AGG - chr2_2:32945498-32945517 Msa0248600:intron 50.0%
!! TAGGTGCATCAGTTGGTGGA+TGG - chr2_2:32945517-32945536 Msa0248600:intron 50.0%
TTGTTCAGGCACCAGGAACA+TGG - chr2_2:32946301-32946320 Msa0248600:intron 50.0%
AACATCCACCTCCATGTTCC+TGG + chr2_2:32946315-32946334 None:intergenic 50.0%
GGAACATGGAGGTGGATGTT+AGG - chr2_2:32946315-32946334 Msa0248600:intron 50.0%
! GTTAGGTGTTGCAGCAGTAC+CGG - chr2_2:32946332-32946351 Msa0248600:intron 50.0%
CCAGCTAGTTGAACGATGGT+TGG + chr2_2:32946770-32946789 None:intergenic 50.0%
CCAACCATCGTTCAACTAGC+TGG - chr2_2:32946767-32946786 Msa0248600:intron 50.0%
! CTTCTGTCACTTGTCACAGC+TGG - chr2_2:32946815-32946834 Msa0248600:intron 50.0%
! CTGCTTTGGATGCTGCTCAA+TGG - chr2_2:32947038-32947057 Msa0248600:intron 50.0%
TGAGCTTAGCTCAGCTGGTA+AGG - chr2_2:32947179-32947198 Msa0248600:intron 50.0%
CAAGGTCCGGGTTCAAATCT+CGG - chr2_2:32947219-32947238 Msa0248600:intron 50.0%
CATTGGCCGAGATTTGAACC+CGG + chr2_2:32947228-32947247 None:intergenic 50.0%
TTGGATATCAGACATGCCCC+AGG + chr2_2:32947285-32947304 None:intergenic 50.0%
CATGGAACTGTTCCCATTCC+TGG + chr2_2:32947429-32947448 None:intergenic 50.0%
CAGGAATGGGAACAGTTCCA+TGG - chr2_2:32947427-32947446 Msa0248600:CDS 50.0%
TTCAGGCACCAGGAACATGG+AGG - chr2_2:32946304-32946323 Msa0248600:intron 55.0%
ACAACCAACGGGGCGATTCT+GGG + chr2_2:32946389-32946408 None:intergenic 55.0%
AACAACCAACGGGGCGATTC+TGG + chr2_2:32946390-32946409 None:intergenic 55.0%
! GCCCCGTTGGTTGTTCAGAA+AGG - chr2_2:32946395-32946414 Msa0248600:intron 55.0%
AGGCACCAGGAACATGGAGG+TGG - chr2_2:32946307-32946326 Msa0248600:intron 60.0%
CCAGCTGAGCTAAGCTCACG+AGG + chr2_2:32947177-32947196 None:intergenic 60.0%
CCTCGTGAGCTTAGCTCAGC+TGG - chr2_2:32947174-32947193 Msa0248600:intron 60.0%
TGCTCCCAGAATCGCCCCGT+TGG - chr2_2:32946382-32946401 Msa0248600:intron 65.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 32942851 32947948 32942851 ID=Msa0248600;Name=Msa0248600
chr2_2 mRNA 32942851 32947948 32942851 ID=Msa0248600-mRNA-1;Parent=Msa0248600;Name=Msa0248600-mRNA-1;_AED=0.05;_eAED=0.05;_QI=134|1|1|1|1|1|6|175|580
chr2_2 exon 32942851 32943523 32942851 ID=Msa0248600-mRNA-1:exon:11169;Parent=Msa0248600-mRNA-1
chr2_2 exon 32943676 32944272 32943676 ID=Msa0248600-mRNA-1:exon:11168;Parent=Msa0248600-mRNA-1
chr2_2 exon 32944383 32944490 32944383 ID=Msa0248600-mRNA-1:exon:11167;Parent=Msa0248600-mRNA-1
chr2_2 exon 32944984 32945319 32944984 ID=Msa0248600-mRNA-1:exon:11166;Parent=Msa0248600-mRNA-1
chr2_2 exon 32947378 32947448 32947378 ID=Msa0248600-mRNA-1:exon:11165;Parent=Msa0248600-mRNA-1
chr2_2 exon 32947682 32947948 32947682 ID=Msa0248600-mRNA-1:exon:11164;Parent=Msa0248600-mRNA-1
chr2_2 five_prime_UTR 32947815 32947948 32947815 ID=Msa0248600-mRNA-1:five_prime_utr;Parent=Msa0248600-mRNA-1
chr2_2 CDS 32947682 32947814 32947682 ID=Msa0248600-mRNA-1:cds;Parent=Msa0248600-mRNA-1
chr2_2 CDS 32947378 32947448 32947378 ID=Msa0248600-mRNA-1:cds;Parent=Msa0248600-mRNA-1
chr2_2 CDS 32944984 32945319 32944984 ID=Msa0248600-mRNA-1:cds;Parent=Msa0248600-mRNA-1
chr2_2 CDS 32944383 32944490 32944383 ID=Msa0248600-mRNA-1:cds;Parent=Msa0248600-mRNA-1
chr2_2 CDS 32943676 32944272 32943676 ID=Msa0248600-mRNA-1:cds;Parent=Msa0248600-mRNA-1
chr2_2 CDS 32943026 32943523 32943026 ID=Msa0248600-mRNA-1:cds;Parent=Msa0248600-mRNA-1
chr2_2 three_prime_UTR 32942851 32943025 32942851 ID=Msa0248600-mRNA-1:three_prime_utr;Parent=Msa0248600-mRNA-1
Gene Sequence

>Msa0248600

ATGGAAGGAGGAGTCCCTGAAGCTGATGTCTCTGCTTTCAGAGAATGTTTGTCTCTATCATGGAAAAATCCTTATGTTCTTCGTCTTGCTTTCTCTGCTGGAATTGGTGGTTTTCTCTTTGGCTATGATACTGGAGTCATATCTGGGGCTCTTTTGTATATAAGAGATGATTTCAAGGCTGTGGATAGACAAACTTGGCTGCAGGAAGCCATAGTGAGTACAGCACTTGCAGGAGCAATCATAGGTGCATCAGTTGGTGGATGGATCAACGATCGATTTGGAAGGAAAAAAGCAATAATTCTTGCAGATGCACTCTTTTTCATTGGCTCAGTTGTTATGGCTGCTGCAATCAATCCAGCTATTCTCATTGTTGGTAGAGTCTTTGTTGGTCTTGGTGTTGGAATGGCTTCAATGGCTTCCCCTTTATACATCTCAGAAGCATCTCCAACTAGAGTTAGAGGAGCACTTGTTAGTCTCAATGGATTTCTCATCACTGGTGGACAATTCCTTTCCTATGTTATCAACTTGGCATTCACAAATGCACCAGGAACATGGAGGTGGATGTTAGGTGTTGCAGCAGTACCGGCTTTAACACAAATCGTATTGATGCTTATGCTCCCAGAATCGCCCCGTTGGTTGTTCAGAAAGGGAAAAGAAGAAGAAGCTAAAGAAATTTTGAGGAAGATATACCCTCCACAAGATGTTGAAGATGAAATCATTGCTCTAAAAGAATCAGTCGAAATGGAAACCAAAGACGATTCGTCTTCAAACAAAGTCAGCATTATCAAACTTCTGAAAACCAAAACAGTAAGAAGAGGTTTATATGCAGGAGTGGGACTACAAATCTTCCAACAATTTGTCGGAATCAACACCGTAATGTACTACAGTCCAACCATCGTTCAACTAGCTGGTTTTGCATCAAACAAAACGGCACTTCTTCTGTCACTTGTCACAGCTGGAATTAATGCATTTGGTTCGATTTTGAGCATATATTTTATTGACAAGACCGGAAGAAAGAAACTTTTGTTGTTTAGTTTGTCCGGTGTTATTGTCTCTCTTGTTGTTTTGACTGTCGTGTTCCATCAAACTACTACTCATTCTCCTATGGTTAGTGAAATTGAAACTTCTAAGTTCAATAATACTTGCCCTGATTATAGAACTGCTTTGGATGCTGCTCAATGGGATTGCATGAAATGTCTTAAGGCTTCTCCTGAATGTGGATTTTGTGCTTCTGCCGGTAATAAGCTATTACCTGGGGCATGTCTGATATCCAATGACACAACAGAAGATCAATGCCAAAAAGAGCAAAGTCGACAATGGTACACAAGAGGATGTCCAAGCAAAAATGGTTGGCTAGCACTAATTGGTCTTTCACTATACATCCTATTCTTCTCACCAGGAATGGGAACAGTTCCATGGGTTGTAAACTCTGAAATATATCCATTAAGATACAGAGGAATATGTGGAGGAATAGCATCAACATCAAATTGGATTTCAAATCTCATTGTTGCACAATCTTTTCTATCATTGACTGATGCTATTGGAACTTCATACACATTCATGATATTCATTTTCATCACTGTTGCTGCCATTGTTTTTGTCATTGTTTTTGTGCCAGAAACAAAGGGACTTCCTATTGAAGAGGTTGAGAACATGTTGGAAAGAAGAACCTTGAATTTTAAGTTTTGGCAAAGGAATTCTGACTCTGATCAAGCATTGACTCAAAAGAATGTGTCATTTTGA
Protein sequence

>Msa0248600

MEGGVPEADVSAFRECLSLSWKNPYVLRLAFSAGIGGFLFGYDTGVISGALLYIRDDFKAVDRQTWLQEAIVSTALAGAIIGASVGGWINDRFGRKKAIILADALFFIGSVVMAAAINPAILIVGRVFVGLGVGMASMASPLYISEASPTRVRGALVSLNGFLITGGQFLSYVINLAFTNAPGTWRWMLGVAAVPALTQIVLMLMLPESPRWLFRKGKEEEAKEILRKIYPPQDVEDEIIALKESVEMETKDDSSSNKVSIIKLLKTKTVRRGLYAGVGLQIFQQFVGINTVMYYSPTIVQLAGFASNKTALLLSLVTAGINAFGSILSIYFIDKTGRKKLLLFSLSGVIVSLVVLTVVFHQTTTHSPMVSEIETSKFNNTCPDYRTALDAAQWDCMKCLKASPECGFCASAGNKLLPGACLISNDTTEDQCQKEQSRQWYTRGCPSKNGWLALIGLSLYILFFSPGMGTVPWVVNSEIYPLRYRGICGGIASTSNWISNLIVAQSFLSLTDAIGTSYTFMIFIFITVAAIVFVIVFVPETKGLPIEEVENMLERRTLNFKFWQRNSDSDQALTQKNVSF*