Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1230520 | XP_003597346.1 | 96.203 | 79 | 3 | 0 | 2 | 80 | 70 | 148 | 5.59e-45 | 151 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1230520 | sp|Q2HU68|H2A1_MEDTR | 96.203 | 79 | 3 | 0 | 2 | 80 | 70 | 148 | 6.98e-48 | 151 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0417270 | Msa1230520 | 0.802913 | 4.477240e-49 | -8.615850e-47 |
| Msa1004550 | Msa1230520 | 0.802483 | 5.490348e-49 | -8.615850e-47 |
| Msa0302170 | Msa1230520 | 0.813813 | 2.116623e-51 | -8.615850e-47 |
| Msa0574890 | Msa1230520 | 0.809964 | 1.458091e-50 | -8.615850e-47 |
| Msa0896540 | Msa1230520 | 0.805854 | 1.091498e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1230520 | MtrunA17_Chr2g0327951 | 96.203 | 79 | 3 | 0 | 2 | 80 | 107 | 185 | 6.90e-49 | 152 |
| Msa1230520 | MtrunA17_Chr4g0035621 | 87.654 | 81 | 8 | 1 | 2 | 80 | 72 | 152 | 4.57e-43 | 136 |
| Msa1230520 | MtrunA17_Chr4g0031041 | 88.750 | 80 | 8 | 1 | 2 | 80 | 66 | 145 | 1.14e-41 | 132 |
| Msa1230520 | MtrunA17_Chr2g0327931 | 81.928 | 83 | 11 | 1 | 2 | 80 | 71 | 153 | 1.49e-41 | 132 |
| Msa1230520 | MtrunA17_Chr4g0031001 | 88.608 | 79 | 7 | 1 | 2 | 80 | 72 | 148 | 1.84e-41 | 132 |
| Msa1230520 | MtrunA17_Chr4g0031651 | 87.342 | 79 | 8 | 1 | 2 | 80 | 72 | 148 | 2.68e-41 | 132 |
| Msa1230520 | MtrunA17_Chr4g0032301 | 88.608 | 79 | 7 | 1 | 2 | 80 | 72 | 148 | 2.68e-41 | 132 |
| Msa1230520 | MtrunA17_Chr8g0379311 | 95.082 | 61 | 3 | 0 | 2 | 62 | 72 | 132 | 1.44e-36 | 120 |
| Msa1230520 | MtrunA17_Chr7g0272611 | 78.873 | 71 | 15 | 0 | 2 | 72 | 74 | 144 | 1.19e-33 | 112 |
| Msa1230520 | MtrunA17_Chr7g0268831 | 71.831 | 71 | 20 | 0 | 2 | 72 | 70 | 140 | 8.38e-29 | 100 |
| Msa1230520 | MtrunA17_Chr7g0273351 | 71.831 | 71 | 20 | 0 | 2 | 72 | 67 | 137 | 1.64e-28 | 99.4 |
| Msa1230520 | MtrunA17_Chr6g0449661 | 70.886 | 79 | 17 | 2 | 2 | 79 | 125 | 198 | 5.33e-28 | 99.8 |
| Msa1230520 | MtrunA17_Chr3g0119971 | 69.620 | 79 | 18 | 2 | 2 | 79 | 120 | 193 | 7.45e-28 | 99.4 |
| Msa1230520 | MtrunA17_Chr7g0273331 | 71.831 | 71 | 20 | 0 | 2 | 72 | 123 | 193 | 9.81e-28 | 99.0 |
| Msa1230520 | MtrunA17_Chr7g0259151 | 82.759 | 58 | 10 | 0 | 2 | 59 | 70 | 127 | 1.12e-27 | 97.4 |
| Msa1230520 | MtrunA17_Chr4g0031031 | 65.823 | 79 | 22 | 1 | 2 | 80 | 37 | 110 | 3.54e-27 | 95.1 |
| Msa1230520 | MtrunA17_Chr2g0319191 | 79.310 | 58 | 12 | 0 | 2 | 59 | 64 | 121 | 6.52e-27 | 95.1 |
| Msa1230520 | MtrunA17_Chr2g0319181 | 79.310 | 58 | 12 | 0 | 2 | 59 | 64 | 121 | 7.89e-27 | 94.7 |
| Msa1230520 | MtrunA17_Chr1g0183701 | 58.824 | 68 | 28 | 0 | 2 | 69 | 35 | 102 | 1.10e-23 | 86.3 |
| Msa1230520 | MtrunA17_Chr7g0273341 | 60.606 | 66 | 19 | 1 | 7 | 72 | 107 | 165 | 6.47e-17 | 70.5 |
| Msa1230520 | MtrunA17_Chr4g0000531 | 71.111 | 45 | 13 | 0 | 15 | 59 | 5 | 49 | 2.39e-16 | 66.2 |
| Msa1230520 | MtrunA17_Chr1g0211651 | 63.158 | 57 | 20 | 1 | 2 | 58 | 72 | 127 | 9.81e-16 | 66.6 |
| Msa1230520 | MtrunA17_Chr1g0148961 | 57.377 | 61 | 25 | 1 | 2 | 62 | 75 | 134 | 1.38e-15 | 66.2 |
| Msa1230520 | MtrunA17_Chr1g0148951 | 57.377 | 61 | 25 | 1 | 2 | 62 | 75 | 134 | 1.38e-15 | 66.2 |
| Msa1230520 | MtrunA17_Chr1g0184901 | 61.404 | 57 | 21 | 1 | 2 | 58 | 75 | 130 | 2.39e-15 | 65.9 |
| Msa1230520 | MtrunA17_Chr4g0024701 | 59.649 | 57 | 22 | 1 | 2 | 58 | 55 | 110 | 1.21e-12 | 58.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1230520 | AT5G02560.2 | 86.585 | 82 | 8 | 1 | 2 | 80 | 96 | 177 | 2.04e-43 | 138 |
| Msa1230520 | AT5G02560.1 | 86.585 | 82 | 8 | 1 | 2 | 80 | 72 | 153 | 2.74e-43 | 137 |
| Msa1230520 | AT5G59870.1 | 75.949 | 79 | 19 | 0 | 2 | 80 | 72 | 150 | 5.38e-36 | 119 |
| Msa1230520 | AT5G27670.1 | 77.215 | 79 | 17 | 1 | 2 | 80 | 73 | 150 | 7.55e-36 | 118 |
| Msa1230520 | AT3G20670.1 | 79.310 | 58 | 12 | 0 | 2 | 59 | 64 | 121 | 3.22e-27 | 96.3 |
| Msa1230520 | AT4G27230.2 | 79.310 | 58 | 12 | 0 | 2 | 59 | 64 | 121 | 6.96e-27 | 95.5 |
| Msa1230520 | AT4G27230.1 | 79.310 | 58 | 12 | 0 | 2 | 59 | 64 | 121 | 6.96e-27 | 95.5 |
| Msa1230520 | AT1G51060.1 | 79.310 | 58 | 12 | 0 | 2 | 59 | 64 | 121 | 7.80e-27 | 95.1 |
| Msa1230520 | AT5G54640.1 | 79.310 | 58 | 12 | 0 | 2 | 59 | 64 | 121 | 8.61e-27 | 95.1 |
| Msa1230520 | AT1G54690.1 | 79.310 | 58 | 12 | 0 | 2 | 59 | 70 | 127 | 9.57e-27 | 95.5 |
| Msa1230520 | AT1G08880.1 | 79.310 | 58 | 12 | 0 | 2 | 59 | 70 | 127 | 9.57e-27 | 95.5 |
| Msa1230520 | AT3G54560.1 | 57.377 | 61 | 25 | 1 | 2 | 62 | 77 | 136 | 2.66e-15 | 65.9 |
| Msa1230520 | AT3G54560.2 | 57.377 | 61 | 25 | 1 | 2 | 62 | 77 | 136 | 2.66e-15 | 65.9 |
| Msa1230520 | AT2G38810.1 | 61.404 | 57 | 21 | 1 | 2 | 58 | 77 | 132 | 3.09e-15 | 65.9 |
| Msa1230520 | AT2G38810.4 | 61.404 | 57 | 21 | 1 | 2 | 58 | 77 | 132 | 3.09e-15 | 65.9 |
| Msa1230520 | AT2G38810.3 | 61.404 | 57 | 21 | 1 | 2 | 58 | 77 | 132 | 3.09e-15 | 65.9 |
| Msa1230520 | AT2G38810.2 | 61.404 | 57 | 21 | 1 | 2 | 58 | 77 | 132 | 3.09e-15 | 65.9 |
| Msa1230520 | AT1G52740.1 | 61.404 | 57 | 21 | 1 | 2 | 58 | 75 | 130 | 7.41e-15 | 64.7 |
| Msa1230520 | AT4G13570.2 | 54.902 | 51 | 22 | 1 | 2 | 52 | 75 | 124 | 6.18e-11 | 54.3 |
| Msa1230520 | AT4G13570.1 | 54.902 | 51 | 22 | 1 | 2 | 52 | 69 | 118 | 6.64e-11 | 54.3 |
Find 25 sgRNAs with CRISPR-Local
Find 264 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTAAGCCTTCTTTGGAGATT+TGG | 0.253652 | 8_2:-6533057 | None:intergenic |
| AACTAAATCTAAGCCTTCTT+TGG | 0.259152 | 8_2:-6533065 | None:intergenic |
| GAAGCCTTCTCATTCTTCTT+AGG | 0.278405 | 8_2:-6533005 | None:intergenic |
| TTCTTCTTAGGCAAAAGAAT+TGG | 0.290939 | 8_2:-6532993 | None:intergenic |
| GGTAGCCTTGGATGGAGATT+TGG | 0.359896 | 8_2:-6533036 | None:intergenic |
| CTTTGGAGATTTGGTAGCCT+TGG | 0.379306 | 8_2:-6533048 | None:intergenic |
| AAAAGAATTGGGTTGATGTT+TGG | 0.400275 | 8_2:-6532981 | None:intergenic |
| TTGTGTTCAGGTTCTTGAAT+TGG | 0.410177 | 8_2:+6532830 | Msa1230520:intron |
| TCTTCTTAGGCAAAAGAATT+GGG | 0.424182 | 8_2:-6532992 | None:intergenic |
| CACGTGACAACAAGAAGAAC+AGG | 0.464610 | 8_2:+6532865 | Msa1230520:CDS |
| GTTCAGGTTCTTGAATTGGC+TGG | 0.491391 | 8_2:+6532834 | Msa1230520:intron |
| CATCCCTAGGCATTTGCTGT+TGG | 0.495579 | 8_2:+6532890 | Msa1230520:CDS |
| GAACTTGGAAAGTTGCTAGC+TGG | 0.514674 | 8_2:+6532930 | Msa1230520:CDS |
| GGCTACCAAATCTCCAAAGA+AGG | 0.519492 | 8_2:+6533052 | Msa1230520:CDS |
| GGAGATTTGGTAGCCTTGGA+TGG | 0.524077 | 8_2:-6533044 | None:intergenic |
| GTGAGGAATGATGAAGAACT+TGG | 0.529342 | 8_2:+6532915 | Msa1230520:CDS |
| ACTGCCAACAGCAAATGCCT+AGG | 0.578012 | 8_2:-6532894 | None:intergenic |
| TTTGCCTAAGAAGAATGAGA+AGG | 0.583712 | 8_2:+6533001 | Msa1230520:CDS |
| TGCTACCAAATCTCCATCCA+AGG | 0.591170 | 8_2:+6533031 | Msa1230520:CDS |
| TCTTGAATTGGCTGGAAATG+CGG | 0.593153 | 8_2:+6532842 | Msa1230520:CDS |
| GGCATTTGCTGTTGGCAGTG+AGG | 0.603106 | 8_2:+6532898 | Msa1230520:CDS |
| CTGCCAACAGCAAATGCCTA+GGG | 0.606589 | 8_2:-6532893 | None:intergenic |
| AGAAGAACAGGATCATCCCT+AGG | 0.619121 | 8_2:+6532877 | Msa1230520:CDS |
| GCTGGAGTTACAATTGCACA+TGG | 0.698871 | 8_2:+6532948 | Msa1230520:CDS |
| GGAGTTACAATTGCACATGG+TGG | 0.781867 | 8_2:+6532951 | Msa1230520:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATAGATTTATGATTTTATT+TGG | - | chr8_2:6531745-6531764 | None:intergenic | 10.0% |
| !! | TTTGTATTTAAATTAGTTAA+GGG | - | chr8_2:6532002-6532021 | None:intergenic | 10.0% |
| !!! | TTTTGTATTTAAATTAGTTA+AGG | - | chr8_2:6532003-6532022 | None:intergenic | 10.0% |
| !!! | AATAGATTTATGATTTTATT+TGG | - | chr8_2:6531745-6531764 | None:intergenic | 10.0% |
| !! | TTTGTATTTAAATTAGTTAA+GGG | - | chr8_2:6532002-6532021 | None:intergenic | 10.0% |
| !!! | TTTTGTATTTAAATTAGTTA+AGG | - | chr8_2:6532003-6532022 | None:intergenic | 10.0% |
| !! | TACAAAAAAAAGTTACAAAT+AGG | + | chr8_2:6531916-6531935 | Msa1230520:intron | 15.0% |
| !! | TTGTATTTAAATTAGTTAAG+GGG | - | chr8_2:6532001-6532020 | None:intergenic | 15.0% |
| !!! | TAAATTTTTTTAAATGTTGC+AGG | + | chr8_2:6532143-6532162 | Msa1230520:intron | 15.0% |
| !! | TACAAAAAAAAGTTACAAAT+AGG | + | chr8_2:6531916-6531935 | Msa1230520:intron | 15.0% |
| !! | TTGTATTTAAATTAGTTAAG+GGG | - | chr8_2:6532001-6532020 | None:intergenic | 15.0% |
| !!! | TAAATTTTTTTAAATGTTGC+AGG | + | chr8_2:6532143-6532162 | Msa1230520:intron | 15.0% |
| !! | GTTACAAATAGGTAAATAAA+AGG | + | chr8_2:6531927-6531946 | Msa1230520:intron | 20.0% |
| !! | AAAAAAAAAAAATATCCACG+TGG | - | chr8_2:6532124-6532143 | None:intergenic | 20.0% |
| !! | AATAGTGAAATTGAGAAAAA+GGG | - | chr8_2:6532773-6532792 | None:intergenic | 20.0% |
| !! | TAATAGTGAAATTGAGAAAA+AGG | - | chr8_2:6532774-6532793 | None:intergenic | 20.0% |
| !! | GTTACAAATAGGTAAATAAA+AGG | + | chr8_2:6531927-6531946 | Msa1230520:intron | 20.0% |
| !! | AAAAAAAAAAAATATCCACG+TGG | - | chr8_2:6532124-6532143 | None:intergenic | 20.0% |
| !! | AATAGTGAAATTGAGAAAAA+GGG | - | chr8_2:6532773-6532792 | None:intergenic | 20.0% |
| !! | TAATAGTGAAATTGAGAAAA+AGG | - | chr8_2:6532774-6532793 | None:intergenic | 20.0% |
| ! | AAATTGAGAAAAAGGGAAAA+TGG | - | chr8_2:6532766-6532785 | None:intergenic | 25.0% |
| ! | TGAACACAAAACACAAATTA+CGG | - | chr8_2:6532819-6532838 | None:intergenic | 25.0% |
| ! | AAATTGAGAAAAAGGGAAAA+TGG | - | chr8_2:6532766-6532785 | None:intergenic | 25.0% |
| ! | TGAACACAAAACACAAATTA+CGG | - | chr8_2:6532819-6532838 | None:intergenic | 25.0% |
| !!! | TGGTGACTACTTTTTAACAA+AGG | + | chr8_2:6531698-6531717 | Msa1230520:intron | 30.0% |
| !!! | TGCAGGCTTTTTTAAATTGT+AGG | + | chr8_2:6532160-6532179 | Msa1230520:intron | 30.0% |
| !!! | GTTTTGATTGTTTGGAATTG+TGG | - | chr8_2:6532240-6532259 | None:intergenic | 30.0% |
| !!! | TTTGAGAGGTTTTGATTGTT+TGG | - | chr8_2:6532248-6532267 | None:intergenic | 30.0% |
| !! | TGGTTATGATGATTTGTTGA+TGG | - | chr8_2:6532284-6532303 | None:intergenic | 30.0% |
| TTATGAATGGCTATAGGTTA+TGG | - | chr8_2:6532327-6532346 | None:intergenic | 30.0% | |
| ATTTGAATGGCTATAGGTTA+CGG | - | chr8_2:6532441-6532460 | None:intergenic | 30.0% | |
| ! | TTGATTGATGATTTGAGGTT+GGG | - | chr8_2:6532483-6532502 | None:intergenic | 30.0% |
| AGCAAGATATTCAAGAATAG+CGG | - | chr8_2:6532722-6532741 | None:intergenic | 30.0% | |
| !! | GTAATTTGTGTTTTGTGTTC+AGG | + | chr8_2:6532818-6532837 | Msa1230520:intron | 30.0% |
| !! | AAAAGAATTGGGTTGATGTT+TGG | - | chr8_2:6532984-6533003 | None:intergenic | 30.0% |
| TCTTCTTAGGCAAAAGAATT+GGG | - | chr8_2:6532995-6533014 | None:intergenic | 30.0% | |
| TTCTTCTTAGGCAAAAGAAT+TGG | - | chr8_2:6532996-6533015 | None:intergenic | 30.0% | |
| !!! | TGGTGACTACTTTTTAACAA+AGG | + | chr8_2:6531698-6531717 | Msa1230520:intron | 30.0% |
| !!! | TGCAGGCTTTTTTAAATTGT+AGG | + | chr8_2:6532160-6532179 | Msa1230520:intron | 30.0% |
| !!! | GTTTTGATTGTTTGGAATTG+TGG | - | chr8_2:6532240-6532259 | None:intergenic | 30.0% |
| !!! | TTTGAGAGGTTTTGATTGTT+TGG | - | chr8_2:6532248-6532267 | None:intergenic | 30.0% |
| !! | TGGTTATGATGATTTGTTGA+TGG | - | chr8_2:6532284-6532303 | None:intergenic | 30.0% |
| TTATGAATGGCTATAGGTTA+TGG | - | chr8_2:6532327-6532346 | None:intergenic | 30.0% | |
| ATTTGAATGGCTATAGGTTA+CGG | - | chr8_2:6532441-6532460 | None:intergenic | 30.0% | |
| ! | TTGATTGATGATTTGAGGTT+GGG | - | chr8_2:6532483-6532502 | None:intergenic | 30.0% |
| AGCAAGATATTCAAGAATAG+CGG | - | chr8_2:6532722-6532741 | None:intergenic | 30.0% | |
| !! | GTAATTTGTGTTTTGTGTTC+AGG | + | chr8_2:6532818-6532837 | Msa1230520:intron | 30.0% |
| !! | AAAAGAATTGGGTTGATGTT+TGG | - | chr8_2:6532984-6533003 | None:intergenic | 30.0% |
| TCTTCTTAGGCAAAAGAATT+GGG | - | chr8_2:6532995-6533014 | None:intergenic | 30.0% | |
| TTCTTCTTAGGCAAAAGAAT+TGG | - | chr8_2:6532996-6533015 | None:intergenic | 30.0% | |
| !! | GCAAGTTTTGTAAAGATAGG+GGG | - | chr8_2:6531970-6531989 | None:intergenic | 35.0% |
| !! | CGCAAGTTTTGTAAAGATAG+GGG | - | chr8_2:6531971-6531990 | None:intergenic | 35.0% |
| !! | CCGCAAGTTTTGTAAAGATA+GGG | - | chr8_2:6531972-6531991 | None:intergenic | 35.0% |
| CCCTATCTTTACAAAACTTG+CGG | + | chr8_2:6531969-6531988 | Msa1230520:intron | 35.0% | |
| !! | ACCGCAAGTTTTGTAAAGAT+AGG | - | chr8_2:6531973-6531992 | None:intergenic | 35.0% |
| TGCCATAGAATCCAAACTTA+GGG | - | chr8_2:6532031-6532050 | None:intergenic | 35.0% | |
| ! | TTTGGATTCTATGGCAGTTT+TGG | + | chr8_2:6532035-6532054 | Msa1230520:intron | 35.0% |
| ! | TTTGGAATTGTGGTGATTAC+TGG | - | chr8_2:6532230-6532249 | None:intergenic | 35.0% |
| !! | TTGTTGATGGTGTATGATGA+GGG | - | chr8_2:6532271-6532290 | None:intergenic | 35.0% |
| !! | TTTGTTGATGGTGTATGATG+AGG | - | chr8_2:6532272-6532291 | None:intergenic | 35.0% |
| ! | ATTGATGTGGTTTGGAATTG+TGG | - | chr8_2:6532304-6532323 | None:intergenic | 35.0% |
| ! | CTATAGGTTATGGATTGATG+TGG | - | chr8_2:6532317-6532336 | None:intergenic | 35.0% |
| ATGTGGTTATGAATGGCTAT+AGG | - | chr8_2:6532333-6532352 | None:intergenic | 35.0% | |
| ATGTTTGCGTTGGATTTGAA+TGG | - | chr8_2:6532454-6532473 | None:intergenic | 35.0% | |
| ! | GTTGATTGATGATTTGAGGT+TGG | - | chr8_2:6532484-6532503 | None:intergenic | 35.0% |
| !! | CTGTGTTGATTGATGATTTG+AGG | - | chr8_2:6532488-6532507 | None:intergenic | 35.0% |
| CAATTTCCAGTTGGAAGAAT+CGG | + | chr8_2:6532635-6532654 | Msa1230520:intron | 35.0% | |
| !! | TCTTGAATATCTTGCTGTTG+AGG | + | chr8_2:6532726-6532745 | Msa1230520:intron | 35.0% |
| ! | TTGTGTTCAGGTTCTTGAAT+TGG | + | chr8_2:6532830-6532849 | Msa1230520:intron | 35.0% |
| TTTGCCTAAGAAGAATGAGA+AGG | + | chr8_2:6533001-6533020 | Msa1230520:CDS | 35.0% | |
| !! | GCAAGTTTTGTAAAGATAGG+GGG | - | chr8_2:6531970-6531989 | None:intergenic | 35.0% |
| !! | CGCAAGTTTTGTAAAGATAG+GGG | - | chr8_2:6531971-6531990 | None:intergenic | 35.0% |
| !! | CCGCAAGTTTTGTAAAGATA+GGG | - | chr8_2:6531972-6531991 | None:intergenic | 35.0% |
| CCCTATCTTTACAAAACTTG+CGG | + | chr8_2:6531969-6531988 | Msa1230520:intron | 35.0% | |
| !! | ACCGCAAGTTTTGTAAAGAT+AGG | - | chr8_2:6531973-6531992 | None:intergenic | 35.0% |
| TGCCATAGAATCCAAACTTA+GGG | - | chr8_2:6532031-6532050 | None:intergenic | 35.0% | |
| ! | TTTGGATTCTATGGCAGTTT+TGG | + | chr8_2:6532035-6532054 | Msa1230520:intron | 35.0% |
| ! | TTTGGAATTGTGGTGATTAC+TGG | - | chr8_2:6532230-6532249 | None:intergenic | 35.0% |
| !! | TTGTTGATGGTGTATGATGA+GGG | - | chr8_2:6532271-6532290 | None:intergenic | 35.0% |
| !! | TTTGTTGATGGTGTATGATG+AGG | - | chr8_2:6532272-6532291 | None:intergenic | 35.0% |
| ! | ATTGATGTGGTTTGGAATTG+TGG | - | chr8_2:6532304-6532323 | None:intergenic | 35.0% |
| ! | CTATAGGTTATGGATTGATG+TGG | - | chr8_2:6532317-6532336 | None:intergenic | 35.0% |
| ATGTGGTTATGAATGGCTAT+AGG | - | chr8_2:6532333-6532352 | None:intergenic | 35.0% | |
| ATGTTTGCGTTGGATTTGAA+TGG | - | chr8_2:6532454-6532473 | None:intergenic | 35.0% | |
| ! | GTTGATTGATGATTTGAGGT+TGG | - | chr8_2:6532484-6532503 | None:intergenic | 35.0% |
| !! | CTGTGTTGATTGATGATTTG+AGG | - | chr8_2:6532488-6532507 | None:intergenic | 35.0% |
| CAATTTCCAGTTGGAAGAAT+CGG | + | chr8_2:6532635-6532654 | Msa1230520:intron | 35.0% | |
| !! | TCTTGAATATCTTGCTGTTG+AGG | + | chr8_2:6532726-6532745 | Msa1230520:intron | 35.0% |
| ! | TTGTGTTCAGGTTCTTGAAT+TGG | + | chr8_2:6532830-6532849 | Msa1230520:intron | 35.0% |
| TTTGCCTAAGAAGAATGAGA+AGG | + | chr8_2:6533001-6533020 | Msa1230520:CDS | 35.0% | |
| CCATAGAATCCAAACTTAGG+GGG | - | chr8_2:6532029-6532048 | None:intergenic | 40.0% | |
| GCCATAGAATCCAAACTTAG+GGG | - | chr8_2:6532030-6532049 | None:intergenic | 40.0% | |
| CTGCCATAGAATCCAAACTT+AGG | - | chr8_2:6532032-6532051 | None:intergenic | 40.0% | |
| !! | ACCAAGTCAAAAAAGCACCA+GGG | - | chr8_2:6532063-6532082 | None:intergenic | 40.0% |
| ! | GGTTATGGATTGATGTGGTT+TGG | - | chr8_2:6532312-6532331 | None:intergenic | 40.0% |
| ! | GGTGATGATGTGGTTATGAA+TGG | - | chr8_2:6532340-6532359 | None:intergenic | 40.0% |
| ! | TGATGATGATTCGATGATGC+TGG | - | chr8_2:6532361-6532380 | None:intergenic | 40.0% |
| !! | GTGTTGGTTTGTTGATGGAA+CGG | - | chr8_2:6532393-6532412 | None:intergenic | 40.0% |
| !! | CTTGAGTGTTGGTTTGTTGA+TGG | - | chr8_2:6532398-6532417 | None:intergenic | 40.0% |
| !! | CTATAGGTTACGGTTTTGTG+AGG | - | chr8_2:6532431-6532450 | None:intergenic | 40.0% |
| CGTTGGATTTGAATGGCTAT+AGG | - | chr8_2:6532447-6532466 | None:intergenic | 40.0% | |
| CAACACAGCAATCACAAAAC+CGG | + | chr8_2:6532500-6532519 | Msa1230520:intron | 40.0% | |
| TCTTGAATTGGCTGGAAATG+CGG | + | chr8_2:6532842-6532861 | Msa1230520:CDS | 40.0% | |
| GTGAGGAATGATGAAGAACT+TGG | + | chr8_2:6532915-6532934 | Msa1230520:CDS | 40.0% | |
| GAAGCCTTCTCATTCTTCTT+AGG | - | chr8_2:6533008-6533027 | None:intergenic | 40.0% | |
| ! | CTAAGCCTTCTTTGGAGATT+TGG | - | chr8_2:6533060-6533079 | None:intergenic | 40.0% |
| CCATAGAATCCAAACTTAGG+GGG | - | chr8_2:6532029-6532048 | None:intergenic | 40.0% | |
| GCCATAGAATCCAAACTTAG+GGG | - | chr8_2:6532030-6532049 | None:intergenic | 40.0% | |
| CTGCCATAGAATCCAAACTT+AGG | - | chr8_2:6532032-6532051 | None:intergenic | 40.0% | |
| !! | ACCAAGTCAAAAAAGCACCA+GGG | - | chr8_2:6532063-6532082 | None:intergenic | 40.0% |
| ! | GGTTATGGATTGATGTGGTT+TGG | - | chr8_2:6532312-6532331 | None:intergenic | 40.0% |
| ! | GGTGATGATGTGGTTATGAA+TGG | - | chr8_2:6532340-6532359 | None:intergenic | 40.0% |
| ! | TGATGATGATTCGATGATGC+TGG | - | chr8_2:6532361-6532380 | None:intergenic | 40.0% |
| !! | GTGTTGGTTTGTTGATGGAA+CGG | - | chr8_2:6532393-6532412 | None:intergenic | 40.0% |
| !! | CTTGAGTGTTGGTTTGTTGA+TGG | - | chr8_2:6532398-6532417 | None:intergenic | 40.0% |
| !! | CTATAGGTTACGGTTTTGTG+AGG | - | chr8_2:6532431-6532450 | None:intergenic | 40.0% |
| CGTTGGATTTGAATGGCTAT+AGG | - | chr8_2:6532447-6532466 | None:intergenic | 40.0% | |
| CAACACAGCAATCACAAAAC+CGG | + | chr8_2:6532500-6532519 | Msa1230520:intron | 40.0% | |
| TCTTGAATTGGCTGGAAATG+CGG | + | chr8_2:6532842-6532861 | Msa1230520:CDS | 40.0% | |
| GTGAGGAATGATGAAGAACT+TGG | + | chr8_2:6532915-6532934 | Msa1230520:CDS | 40.0% | |
| GAAGCCTTCTCATTCTTCTT+AGG | - | chr8_2:6533008-6533027 | None:intergenic | 40.0% | |
| ! | CTAAGCCTTCTTTGGAGATT+TGG | - | chr8_2:6533060-6533079 | None:intergenic | 40.0% |
| ACAAAACAGCCCCCTAAGTT+TGG | + | chr8_2:6532017-6532036 | Msa1230520:intron | 45.0% | |
| CCCCCTAAGTTTGGATTCTA+TGG | + | chr8_2:6532026-6532045 | Msa1230520:intron | 45.0% | |
| !! | CAAGTCAAAAAAGCACCAGG+GGG | - | chr8_2:6532061-6532080 | None:intergenic | 45.0% |
| !! | CCAAGTCAAAAAAGCACCAG+GGG | - | chr8_2:6532062-6532081 | None:intergenic | 45.0% |
| !! | GACCAAGTCAAAAAAGCACC+AGG | - | chr8_2:6532064-6532083 | None:intergenic | 45.0% |
| GCACCAAACATAAGGGGTTT+GGG | - | chr8_2:6532102-6532121 | None:intergenic | 45.0% | |
| GTGTATGATGAGGGTTTGAG+AGG | - | chr8_2:6532262-6532281 | None:intergenic | 45.0% | |
| ! | GTTTGTTGATGGAACGGTTC+AGG | - | chr8_2:6532387-6532406 | None:intergenic | 45.0% |
| ! | GATGATTTGAGGTTGGGTAC+TGG | - | chr8_2:6532477-6532496 | None:intergenic | 45.0% |
| !! | TTCCGGATCGGTTTGTATTG+GGG | - | chr8_2:6532526-6532545 | None:intergenic | 45.0% |
| !! | GTTCCGGATCGGTTTGTATT+GGG | - | chr8_2:6532527-6532546 | None:intergenic | 45.0% |
| AGTAGGACGTAACCGTAGAA+GGG | + | chr8_2:6532548-6532567 | Msa1230520:intron | 45.0% | |
| TTGTCACTGCCTTCTTCCTT+GGG | - | chr8_2:6532595-6532614 | None:intergenic | 45.0% | |
| ! | AAATTGAAGACCAGCTCTGG+TGG | - | chr8_2:6532621-6532640 | None:intergenic | 45.0% |
| TGGAAATTGAAGACCAGCTC+TGG | - | chr8_2:6532624-6532643 | None:intergenic | 45.0% | |
| !! | GCTGGTCTTCAATTTCCAGT+TGG | + | chr8_2:6532626-6532645 | Msa1230520:intron | 45.0% |
| TTCCAGTTGGAAGAATCGGT+CGG | + | chr8_2:6532639-6532658 | Msa1230520:intron | 45.0% | |
| ATCGGTCGGTACTTGAAGAA+AGG | + | chr8_2:6532653-6532672 | Msa1230520:intron | 45.0% | |
| GATATTCAAGAATAGCGGCG+AGG | - | chr8_2:6532717-6532736 | None:intergenic | 45.0% | |
| ! | GTTCAGGTTCTTGAATTGGC+TGG | + | chr8_2:6532834-6532853 | Msa1230520:intron | 45.0% |
| CACGTGACAACAAGAAGAAC+AGG | + | chr8_2:6532865-6532884 | Msa1230520:CDS | 45.0% | |
| AGAAGAACAGGATCATCCCT+AGG | + | chr8_2:6532877-6532896 | Msa1230520:CDS | 45.0% | |
| GAACTTGGAAAGTTGCTAGC+TGG | + | chr8_2:6532930-6532949 | Msa1230520:CDS | 45.0% | |
| GCTGGAGTTACAATTGCACA+TGG | + | chr8_2:6532948-6532967 | Msa1230520:CDS | 45.0% | |
| GGAGTTACAATTGCACATGG+TGG | + | chr8_2:6532951-6532970 | Msa1230520:CDS | 45.0% | |
| TGCTACCAAATCTCCATCCA+AGG | + | chr8_2:6533031-6533050 | Msa1230520:CDS | 45.0% | |
| ! | CTTTGGAGATTTGGTAGCCT+TGG | - | chr8_2:6533051-6533070 | None:intergenic | 45.0% |
| GGCTACCAAATCTCCAAAGA+AGG | + | chr8_2:6533052-6533071 | Msa1230520:CDS | 45.0% | |
| ACAAAACAGCCCCCTAAGTT+TGG | + | chr8_2:6532017-6532036 | Msa1230520:intron | 45.0% | |
| CCCCCTAAGTTTGGATTCTA+TGG | + | chr8_2:6532026-6532045 | Msa1230520:intron | 45.0% | |
| !! | CAAGTCAAAAAAGCACCAGG+GGG | - | chr8_2:6532061-6532080 | None:intergenic | 45.0% |
| !! | CCAAGTCAAAAAAGCACCAG+GGG | - | chr8_2:6532062-6532081 | None:intergenic | 45.0% |
| !! | GACCAAGTCAAAAAAGCACC+AGG | - | chr8_2:6532064-6532083 | None:intergenic | 45.0% |
| GCACCAAACATAAGGGGTTT+GGG | - | chr8_2:6532102-6532121 | None:intergenic | 45.0% | |
| GTGTATGATGAGGGTTTGAG+AGG | - | chr8_2:6532262-6532281 | None:intergenic | 45.0% | |
| ! | GTTTGTTGATGGAACGGTTC+AGG | - | chr8_2:6532387-6532406 | None:intergenic | 45.0% |
| ! | GATGATTTGAGGTTGGGTAC+TGG | - | chr8_2:6532477-6532496 | None:intergenic | 45.0% |
| !! | TTCCGGATCGGTTTGTATTG+GGG | - | chr8_2:6532526-6532545 | None:intergenic | 45.0% |
| !! | GTTCCGGATCGGTTTGTATT+GGG | - | chr8_2:6532527-6532546 | None:intergenic | 45.0% |
| AGTAGGACGTAACCGTAGAA+GGG | + | chr8_2:6532548-6532567 | Msa1230520:intron | 45.0% | |
| TTGTCACTGCCTTCTTCCTT+GGG | - | chr8_2:6532595-6532614 | None:intergenic | 45.0% | |
| ! | AAATTGAAGACCAGCTCTGG+TGG | - | chr8_2:6532621-6532640 | None:intergenic | 45.0% |
| TGGAAATTGAAGACCAGCTC+TGG | - | chr8_2:6532624-6532643 | None:intergenic | 45.0% | |
| !! | GCTGGTCTTCAATTTCCAGT+TGG | + | chr8_2:6532626-6532645 | Msa1230520:intron | 45.0% |
| TTCCAGTTGGAAGAATCGGT+CGG | + | chr8_2:6532639-6532658 | Msa1230520:intron | 45.0% | |
| ATCGGTCGGTACTTGAAGAA+AGG | + | chr8_2:6532653-6532672 | Msa1230520:intron | 45.0% | |
| GATATTCAAGAATAGCGGCG+AGG | - | chr8_2:6532717-6532736 | None:intergenic | 45.0% | |
| ! | GTTCAGGTTCTTGAATTGGC+TGG | + | chr8_2:6532834-6532853 | Msa1230520:intron | 45.0% |
| CACGTGACAACAAGAAGAAC+AGG | + | chr8_2:6532865-6532884 | Msa1230520:CDS | 45.0% | |
| AGAAGAACAGGATCATCCCT+AGG | + | chr8_2:6532877-6532896 | Msa1230520:CDS | 45.0% | |
| GAACTTGGAAAGTTGCTAGC+TGG | + | chr8_2:6532930-6532949 | Msa1230520:CDS | 45.0% | |
| GCTGGAGTTACAATTGCACA+TGG | + | chr8_2:6532948-6532967 | Msa1230520:CDS | 45.0% | |
| GGAGTTACAATTGCACATGG+TGG | + | chr8_2:6532951-6532970 | Msa1230520:CDS | 45.0% | |
| TGCTACCAAATCTCCATCCA+AGG | + | chr8_2:6533031-6533050 | Msa1230520:CDS | 45.0% | |
| ! | CTTTGGAGATTTGGTAGCCT+TGG | - | chr8_2:6533051-6533070 | None:intergenic | 45.0% |
| GGCTACCAAATCTCCAAAGA+AGG | + | chr8_2:6533052-6533071 | Msa1230520:CDS | 45.0% | |
| !! | AATAAAACAAATTAAAAAAA+AGG | + | chr8_2:6532194-6532213 | Msa1230520:intron | 5.0% |
| !! | ATAAAACAAATTAAAAAAAA+GGG | + | chr8_2:6532195-6532214 | Msa1230520:intron | 5.0% |
| !! | AATAAAACAAATTAAAAAAA+AGG | + | chr8_2:6532194-6532213 | Msa1230520:intron | 5.0% |
| !! | ATAAAACAAATTAAAAAAAA+GGG | + | chr8_2:6532195-6532214 | Msa1230520:intron | 5.0% |
| !!! | CCCCTGGTGCTTTTTTGACT+TGG | + | chr8_2:6532059-6532078 | Msa1230520:intron | 50.0% |
| !! | TGACTTGGTCAGTGATGACG+TGG | + | chr8_2:6532074-6532093 | Msa1230520:intron | 50.0% |
| GCACCCAAACCCCTTATGTT+TGG | + | chr8_2:6532096-6532115 | Msa1230520:intron | 50.0% | |
| GGCACCAAACATAAGGGGTT+TGG | - | chr8_2:6532103-6532122 | None:intergenic | 50.0% | |
| CACGTGGCACCAAACATAAG+GGG | - | chr8_2:6532108-6532127 | None:intergenic | 50.0% | |
| CCACGTGGCACCAAACATAA+GGG | - | chr8_2:6532109-6532128 | None:intergenic | 50.0% | |
| TCCACGTGGCACCAAACATA+AGG | - | chr8_2:6532110-6532129 | None:intergenic | 50.0% | |
| ! | CGATGATGCTGGTGATGATG+TGG | - | chr8_2:6532350-6532369 | None:intergenic | 50.0% |
| !! | CGGTTTTGTGAGGTTTGCGA+CGG | - | chr8_2:6532421-6532440 | None:intergenic | 50.0% |
| !! | TGGGTACTGGATGTTTGCGT+TGG | - | chr8_2:6532464-6532483 | None:intergenic | 50.0% |
| !! | GGTTCCGGATCGGTTTGTAT+TGG | - | chr8_2:6532528-6532547 | None:intergenic | 50.0% |
| CTTCTACGGTTACGTCCTAC+TGG | - | chr8_2:6532549-6532568 | None:intergenic | 50.0% | |
| CAGTAGGACGTAACCGTAGA+AGG | + | chr8_2:6532547-6532566 | Msa1230520:intron | 50.0% | |
| CTTGTCACTGCCTTCTTCCT+TGG | - | chr8_2:6532596-6532615 | None:intergenic | 50.0% | |
| ! | TACCGACCGATTCTTCCAAC+TGG | - | chr8_2:6532644-6532663 | None:intergenic | 50.0% |
| AGGAAGATACGCTCAACGTG+TGG | + | chr8_2:6532673-6532692 | Msa1230520:intron | 50.0% | |
| ATACGCTCAACGTGTGGTAC+TGG | + | chr8_2:6532679-6532698 | Msa1230520:intron | 50.0% | |
| AGAATAGCGGCGAGGTAAAC+AGG | - | chr8_2:6532709-6532728 | None:intergenic | 50.0% | |
| !! | CATCCCTAGGCATTTGCTGT+TGG | + | chr8_2:6532890-6532909 | Msa1230520:CDS | 50.0% |
| CTGCCAACAGCAAATGCCTA+GGG | - | chr8_2:6532896-6532915 | None:intergenic | 50.0% | |
| ACTGCCAACAGCAAATGCCT+AGG | - | chr8_2:6532897-6532916 | None:intergenic | 50.0% | |
| ! | GGTAGCCTTGGATGGAGATT+TGG | - | chr8_2:6533039-6533058 | None:intergenic | 50.0% |
| ! | GGAGATTTGGTAGCCTTGGA+TGG | - | chr8_2:6533047-6533066 | None:intergenic | 50.0% |
| !!! | CCCCTGGTGCTTTTTTGACT+TGG | + | chr8_2:6532059-6532078 | Msa1230520:intron | 50.0% |
| !! | TGACTTGGTCAGTGATGACG+TGG | + | chr8_2:6532074-6532093 | Msa1230520:intron | 50.0% |
| GCACCCAAACCCCTTATGTT+TGG | + | chr8_2:6532096-6532115 | Msa1230520:intron | 50.0% | |
| GGCACCAAACATAAGGGGTT+TGG | - | chr8_2:6532103-6532122 | None:intergenic | 50.0% | |
| CACGTGGCACCAAACATAAG+GGG | - | chr8_2:6532108-6532127 | None:intergenic | 50.0% | |
| CCACGTGGCACCAAACATAA+GGG | - | chr8_2:6532109-6532128 | None:intergenic | 50.0% | |
| TCCACGTGGCACCAAACATA+AGG | - | chr8_2:6532110-6532129 | None:intergenic | 50.0% | |
| ! | CGATGATGCTGGTGATGATG+TGG | - | chr8_2:6532350-6532369 | None:intergenic | 50.0% |
| !! | CGGTTTTGTGAGGTTTGCGA+CGG | - | chr8_2:6532421-6532440 | None:intergenic | 50.0% |
| !! | TGGGTACTGGATGTTTGCGT+TGG | - | chr8_2:6532464-6532483 | None:intergenic | 50.0% |
| !! | GGTTCCGGATCGGTTTGTAT+TGG | - | chr8_2:6532528-6532547 | None:intergenic | 50.0% |
| CTTCTACGGTTACGTCCTAC+TGG | - | chr8_2:6532549-6532568 | None:intergenic | 50.0% | |
| CAGTAGGACGTAACCGTAGA+AGG | + | chr8_2:6532547-6532566 | Msa1230520:intron | 50.0% | |
| CTTGTCACTGCCTTCTTCCT+TGG | - | chr8_2:6532596-6532615 | None:intergenic | 50.0% | |
| ! | TACCGACCGATTCTTCCAAC+TGG | - | chr8_2:6532644-6532663 | None:intergenic | 50.0% |
| AGGAAGATACGCTCAACGTG+TGG | + | chr8_2:6532673-6532692 | Msa1230520:intron | 50.0% | |
| ATACGCTCAACGTGTGGTAC+TGG | + | chr8_2:6532679-6532698 | Msa1230520:intron | 50.0% | |
| AGAATAGCGGCGAGGTAAAC+AGG | - | chr8_2:6532709-6532728 | None:intergenic | 50.0% | |
| !! | CATCCCTAGGCATTTGCTGT+TGG | + | chr8_2:6532890-6532909 | Msa1230520:CDS | 50.0% |
| CTGCCAACAGCAAATGCCTA+GGG | - | chr8_2:6532896-6532915 | None:intergenic | 50.0% | |
| ACTGCCAACAGCAAATGCCT+AGG | - | chr8_2:6532897-6532916 | None:intergenic | 50.0% | |
| ! | GGTAGCCTTGGATGGAGATT+TGG | - | chr8_2:6533039-6533058 | None:intergenic | 50.0% |
| ! | GGAGATTTGGTAGCCTTGGA+TGG | - | chr8_2:6533047-6533066 | None:intergenic | 50.0% |
| !! | CCCTTATGTTTGGTGCCACG+TGG | + | chr8_2:6532106-6532125 | Msa1230520:intron | 55.0% |
| GTTTGCGACGGCTTGAGTGT+TGG | - | chr8_2:6532409-6532428 | None:intergenic | 55.0% | |
| !! | GGATCGGTTTGTATTGGGGC+CGG | - | chr8_2:6532522-6532541 | None:intergenic | 55.0% |
| GGCCCCAATACAAACCGATC+CGG | + | chr8_2:6532521-6532540 | Msa1230520:intron | 55.0% | |
| CAAACCGATCCGGAACCAGT+AGG | + | chr8_2:6532531-6532550 | Msa1230520:intron | 55.0% | |
| !! | ACGTCCTACTGGTTCCGGAT+CGG | - | chr8_2:6532538-6532557 | None:intergenic | 55.0% |
| !! | CGGTTACGTCCTACTGGTTC+CGG | - | chr8_2:6532543-6532562 | None:intergenic | 55.0% |
| GAAAGGTGGCCCAAGGAAGA+AGG | + | chr8_2:6532583-6532602 | Msa1230520:intron | 55.0% | |
| GTGACAAGATCCACCAGAGC+TGG | + | chr8_2:6532608-6532627 | Msa1230520:intron | 55.0% | |
| !! | GGCATTTGCTGTTGGCAGTG+AGG | + | chr8_2:6532898-6532917 | Msa1230520:CDS | 55.0% |
| !! | CCCTTATGTTTGGTGCCACG+TGG | + | chr8_2:6532106-6532125 | Msa1230520:intron | 55.0% |
| GTTTGCGACGGCTTGAGTGT+TGG | - | chr8_2:6532409-6532428 | None:intergenic | 55.0% | |
| !! | GGATCGGTTTGTATTGGGGC+CGG | - | chr8_2:6532522-6532541 | None:intergenic | 55.0% |
| GGCCCCAATACAAACCGATC+CGG | + | chr8_2:6532521-6532540 | Msa1230520:intron | 55.0% | |
| CAAACCGATCCGGAACCAGT+AGG | + | chr8_2:6532531-6532550 | Msa1230520:intron | 55.0% | |
| !! | ACGTCCTACTGGTTCCGGAT+CGG | - | chr8_2:6532538-6532557 | None:intergenic | 55.0% |
| !! | CGGTTACGTCCTACTGGTTC+CGG | - | chr8_2:6532543-6532562 | None:intergenic | 55.0% |
| GAAAGGTGGCCCAAGGAAGA+AGG | + | chr8_2:6532583-6532602 | Msa1230520:intron | 55.0% | |
| GTGACAAGATCCACCAGAGC+TGG | + | chr8_2:6532608-6532627 | Msa1230520:intron | 55.0% | |
| !! | GGCATTTGCTGTTGGCAGTG+AGG | + | chr8_2:6532898-6532917 | Msa1230520:CDS | 55.0% |
| !! | CTATGGCAGTTTTGGCCCCC+TGG | + | chr8_2:6532043-6532062 | Msa1230520:intron | 60.0% |
| ! | ACGTAACCGTAGAAGGGCGC+TGG | + | chr8_2:6532554-6532573 | Msa1230520:intron | 60.0% |
| !! | TAACCGTAGAAGGGCGCTGG+TGG | + | chr8_2:6532557-6532576 | Msa1230520:intron | 60.0% |
| CTTCCACCAGCGCCCTTCTA+CGG | - | chr8_2:6532563-6532582 | None:intergenic | 60.0% | |
| !! | AAGGGCGCTGGTGGAAGGAA+AGG | + | chr8_2:6532566-6532585 | Msa1230520:intron | 60.0% |
| GTGGAAGGAAAGGTGGCCCA+AGG | + | chr8_2:6532576-6532595 | Msa1230520:intron | 60.0% | |
| !! | CTATGGCAGTTTTGGCCCCC+TGG | + | chr8_2:6532043-6532062 | Msa1230520:intron | 60.0% |
| ! | ACGTAACCGTAGAAGGGCGC+TGG | + | chr8_2:6532554-6532573 | Msa1230520:intron | 60.0% |
| !! | TAACCGTAGAAGGGCGCTGG+TGG | + | chr8_2:6532557-6532576 | Msa1230520:intron | 60.0% |
| CTTCCACCAGCGCCCTTCTA+CGG | - | chr8_2:6532563-6532582 | None:intergenic | 60.0% | |
| !! | AAGGGCGCTGGTGGAAGGAA+AGG | + | chr8_2:6532566-6532585 | Msa1230520:intron | 60.0% |
| GTGGAAGGAAAGGTGGCCCA+AGG | + | chr8_2:6532576-6532595 | Msa1230520:intron | 60.0% | |
| !! | CGTAGAAGGGCGCTGGTGGA+AGG | + | chr8_2:6532561-6532580 | Msa1230520:intron | 65.0% |
| !! | GGCGCTGGTGGAAGGAAAGG+TGG | + | chr8_2:6532569-6532588 | Msa1230520:intron | 65.0% |
| !! | CGTAGAAGGGCGCTGGTGGA+AGG | + | chr8_2:6532561-6532580 | Msa1230520:intron | 65.0% |
| !! | GGCGCTGGTGGAAGGAAAGG+TGG | + | chr8_2:6532569-6532588 | Msa1230520:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 6531697 | 6533079 | 6531697 | ID=Msa1230520;Name=Msa1230520 |
| chr8_2 | mRNA | 6531697 | 6533079 | 6531697 | ID=Msa1230520-mRNA-1;Parent=Msa1230520;Name=Msa1230520-mRNA-1;_AED=0.24;_eAED=0.24;_QI=0|0|0|0.5|1|1|2|0|80 |
| chr8_2 | exon | 6531697 | 6531699 | 6531697 | ID=Msa1230520-mRNA-1:exon:2437;Parent=Msa1230520-mRNA-1 |
| chr8_2 | exon | 6532840 | 6533079 | 6532840 | ID=Msa1230520-mRNA-1:exon:2438;Parent=Msa1230520-mRNA-1 |
| chr8_2 | CDS | 6531697 | 6531699 | 6531697 | ID=Msa1230520-mRNA-1:cds;Parent=Msa1230520-mRNA-1 |
| chr8_2 | CDS | 6532840 | 6533079 | 6532840 | ID=Msa1230520-mRNA-1:cds;Parent=Msa1230520-mRNA-1 |
| Gene Sequence |
| Protein sequence |
