Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0896540 | XP_013452832.2 | 98.378 | 370 | 6 | 0 | 1 | 370 | 1 | 370 | 0.0 | 751 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0896540 | sp|Q9SX73|KIP1L_ARATH | 33.083 | 266 | 148 | 3 | 41 | 306 | 7 | 242 | 6.14e-38 | 140 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0896540 | A0A396HGY0 | 98.378 | 370 | 6 | 0 | 1 | 370 | 1 | 370 | 0.0 | 751 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000190 | Msa0896540 | 0.824387 | 8.298153e-54 | -8.615850e-47 |
| Msa0003700 | Msa0896540 | 0.829130 | 6.114955e-55 | -8.615850e-47 |
| Msa0005890 | Msa0896540 | 0.808701 | 2.721828e-50 | -8.615850e-47 |
| Msa0007480 | Msa0896540 | 0.816981 | 4.178679e-52 | -8.615850e-47 |
| Msa0008670 | Msa0896540 | 0.807483 | 4.944638e-50 | -8.615850e-47 |
| Msa0014990 | Msa0896540 | 0.805180 | 1.511591e-49 | -8.615850e-47 |
| Msa0017510 | Msa0896540 | 0.845656 | 3.543950e-59 | -8.615850e-47 |
| Msa0018000 | Msa0896540 | 0.813989 | 1.935647e-51 | -8.615850e-47 |
| Msa0021500 | Msa0896540 | 0.802255 | 6.118708e-49 | -8.615850e-47 |
| Msa0027230 | Msa0896540 | 0.805086 | 1.581612e-49 | -8.615850e-47 |
| Msa0028420 | Msa0896540 | 0.866546 | 2.635096e-65 | -8.615850e-47 |
| Msa0028640 | Msa0896540 | 0.809509 | 1.827165e-50 | -8.615850e-47 |
| Msa0034270 | Msa0896540 | 0.815237 | 1.024615e-51 | -8.615850e-47 |
| Msa0040240 | Msa0896540 | 0.822344 | 2.491516e-53 | -8.615850e-47 |
| Msa0042610 | Msa0896540 | 0.834707 | 2.565129e-56 | -8.615850e-47 |
| Msa0044020 | Msa0896540 | 0.802411 | 5.682129e-49 | -8.615850e-47 |
| Msa0053780 | Msa0896540 | 0.810826 | 9.502756e-51 | -8.615850e-47 |
| Msa0061380 | Msa0896540 | 0.803677 | 3.110452e-49 | -8.615850e-47 |
| Msa0069330 | Msa0896540 | 0.822179 | 2.720955e-53 | -8.615850e-47 |
| Msa0074240 | Msa0896540 | 0.806908 | 6.544982e-50 | -8.615850e-47 |
| Msa0075220 | Msa0896540 | 0.809925 | 1.486839e-50 | -8.615850e-47 |
| Msa0076250 | Msa0896540 | 0.833192 | 6.141396e-56 | -8.615850e-47 |
| Msa0078650 | Msa0896540 | 0.829158 | 6.021200e-55 | -8.615850e-47 |
| Msa0081520 | Msa0896540 | 0.832729 | 8.007071e-56 | -8.615850e-47 |
| Msa0087940 | Msa0896540 | 0.823826 | 1.123945e-53 | -8.615850e-47 |
| Msa0089630 | Msa0896540 | 0.814016 | 1.909622e-51 | -8.615850e-47 |
| Msa0090400 | Msa0896540 | 0.809404 | 1.924141e-50 | -8.615850e-47 |
| Msa0090590 | Msa0896540 | 0.801718 | 7.890266e-49 | -8.615850e-47 |
| Msa0092790 | Msa0896540 | 0.825677 | 4.115542e-54 | -8.615850e-47 |
| Msa0094130 | Msa0896540 | 0.811828 | 5.757983e-51 | -8.615850e-47 |
| Msa0094140 | Msa0896540 | 0.846968 | 1.555885e-59 | -8.615850e-47 |
| Msa0094850 | Msa0896540 | 0.813426 | 2.575704e-51 | -8.615850e-47 |
| Msa0104550 | Msa0896540 | 0.813747 | 2.188160e-51 | -8.615850e-47 |
| Msa0110970 | Msa0896540 | 0.856040 | 4.208330e-62 | -8.615850e-47 |
| Msa0115000 | Msa0896540 | 0.805191 | 1.503717e-49 | -8.615850e-47 |
| Msa0118570 | Msa0896540 | 0.824273 | 8.826671e-54 | -8.615850e-47 |
| Msa0614000 | Msa0896540 | 0.803248 | 3.816915e-49 | -8.615850e-47 |
| Msa0625630 | Msa0896540 | 0.802230 | 6.192481e-49 | -8.615850e-47 |
| Msa0626450 | Msa0896540 | 0.822714 | 2.043189e-53 | -8.615850e-47 |
| Msa0626490 | Msa0896540 | 0.822701 | 2.057329e-53 | -8.615850e-47 |
| Msa0626510 | Msa0896540 | 0.800120 | 1.672642e-48 | -8.615850e-47 |
| Msa0627450 | Msa0896540 | 0.814794 | 1.284657e-51 | -8.615850e-47 |
| Msa0628360 | Msa0896540 | 0.801112 | 1.050018e-48 | -8.615850e-47 |
| Msa0637560 | Msa0896540 | 0.828971 | 6.681431e-55 | -8.615850e-47 |
| Msa0637580 | Msa0896540 | 0.819545 | 1.098179e-52 | -8.615850e-47 |
| Msa0638480 | Msa0896540 | 0.806714 | 7.195068e-50 | -8.615850e-47 |
| Msa0643080 | Msa0896540 | 0.824388 | 8.292914e-54 | -8.615850e-47 |
| Msa0643300 | Msa0896540 | 0.839552 | 1.479677e-57 | -8.615850e-47 |
| Msa0655560 | Msa0896540 | 0.807903 | 4.026595e-50 | -8.615850e-47 |
| Msa0663300 | Msa0896540 | 0.836030 | 1.187944e-56 | -8.615850e-47 |
| Msa0663390 | Msa0896540 | 0.816483 | 5.404290e-52 | -8.615850e-47 |
| Msa0664060 | Msa0896540 | 0.828109 | 1.078988e-54 | -8.615850e-47 |
| Msa0664600 | Msa0896540 | 0.820264 | 7.520939e-53 | -8.615850e-47 |
| Msa0667050 | Msa0896540 | 0.827009 | 1.982353e-54 | -8.615850e-47 |
| Msa0669320 | Msa0896540 | 0.800245 | 1.577523e-48 | -8.615850e-47 |
| Msa0677410 | Msa0896540 | 0.806815 | 6.848296e-50 | -8.615850e-47 |
| Msa0679870 | Msa0896540 | 0.815294 | 9.954005e-52 | -8.615850e-47 |
| Msa0682330 | Msa0896540 | 0.830580 | 2.710275e-55 | -8.615850e-47 |
| Msa0683510 | Msa0896540 | 0.808416 | 3.130536e-50 | -8.615850e-47 |
| Msa0683570 | Msa0896540 | 0.853046 | 3.094821e-61 | -8.615850e-47 |
| Msa0697160 | Msa0896540 | 0.800363 | 1.492495e-48 | -8.615850e-47 |
| Msa0703050 | Msa0896540 | 0.815472 | 9.086905e-52 | -8.615850e-47 |
| Msa0724910 | Msa0896540 | 0.825907 | 3.628095e-54 | -8.615850e-47 |
| Msa0730430 | Msa0896540 | 0.816317 | 5.884953e-52 | -8.615850e-47 |
| Msa0741240 | Msa0896540 | 0.825605 | 4.280411e-54 | -8.615850e-47 |
| Msa0750880 | Msa0896540 | 0.810084 | 1.373964e-50 | -8.615850e-47 |
| Msa0754230 | Msa0896540 | 0.800902 | 1.159008e-48 | -8.615850e-47 |
| Msa0754520 | Msa0896540 | 0.819296 | 1.251339e-52 | -8.615850e-47 |
| Msa0766580 | Msa0896540 | 0.810101 | 1.362606e-50 | -8.615850e-47 |
| Msa0769180 | Msa0896540 | 0.820428 | 6.895239e-53 | -8.615850e-47 |
| Msa0770720 | Msa0896540 | 0.808722 | 2.693404e-50 | -8.615850e-47 |
| Msa0775700 | Msa0896540 | 0.814415 | 1.558438e-51 | -8.615850e-47 |
| Msa0779870 | Msa0896540 | 0.802750 | 4.837142e-49 | -8.615850e-47 |
| Msa0780270 | Msa0896540 | 0.815268 | 1.008501e-51 | -8.615850e-47 |
| Msa0795870 | Msa0896540 | 0.824066 | 9.871946e-54 | -8.615850e-47 |
| Msa0816710 | Msa0896540 | 0.803034 | 4.226516e-49 | -8.615850e-47 |
| Msa0818310 | Msa0896540 | 0.801330 | 9.474497e-49 | -8.615850e-47 |
| Msa0823820 | Msa0896540 | 0.805160 | 1.526616e-49 | -8.615850e-47 |
| Msa0826130 | Msa0896540 | 0.833927 | 4.024805e-56 | -8.615850e-47 |
| Msa0828560 | Msa0896540 | 0.828699 | 7.773495e-55 | -8.615850e-47 |
| Msa0833220 | Msa0896540 | 0.820806 | 5.645046e-53 | -8.615850e-47 |
| Msa0833650 | Msa0896540 | 0.819007 | 1.455853e-52 | -8.615850e-47 |
| Msa0835960 | Msa0896540 | 0.815287 | 9.988363e-52 | -8.615850e-47 |
| Msa0123100 | Msa0896540 | 0.806813 | 6.854733e-50 | -8.615850e-47 |
| Msa0124060 | Msa0896540 | 0.827846 | 1.248792e-54 | -8.615850e-47 |
| Msa0124280 | Msa0896540 | 0.832751 | 7.906250e-56 | -8.615850e-47 |
| Msa0126370 | Msa0896540 | 0.823467 | 1.363524e-53 | -8.615850e-47 |
| Msa0129940 | Msa0896540 | 0.810989 | 8.758754e-51 | -8.615850e-47 |
| Msa0134610 | Msa0896540 | 0.809887 | 1.515141e-50 | -8.615850e-47 |
| Msa0137880 | Msa0896540 | 0.812045 | 5.166140e-51 | -8.615850e-47 |
| Msa0140780 | Msa0896540 | 0.825359 | 4.894313e-54 | -8.615850e-47 |
| Msa0142200 | Msa0896540 | 0.801569 | 8.463926e-49 | -8.615850e-47 |
| Msa0144360 | Msa0896540 | 0.802596 | 5.205068e-49 | -8.615850e-47 |
| Msa0146260 | Msa0896540 | 0.851494 | 8.555891e-61 | -8.615850e-47 |
| Msa0146280 | Msa0896540 | 0.804637 | 1.963188e-49 | -8.615850e-47 |
| Msa0152400 | Msa0896540 | 0.814089 | 1.840298e-51 | -8.615850e-47 |
| Msa0152430 | Msa0896540 | 0.802399 | 5.713741e-49 | -8.615850e-47 |
| Msa0157290 | Msa0896540 | 0.846436 | 2.174667e-59 | -8.615850e-47 |
| Msa0163980 | Msa0896540 | 0.806021 | 1.006960e-49 | -8.615850e-47 |
| Msa0167520 | Msa0896540 | 0.815104 | 1.096549e-51 | -8.615850e-47 |
| Msa0168500 | Msa0896540 | 0.841373 | 4.942141e-58 | -8.615850e-47 |
| Msa0168650 | Msa0896540 | 0.821165 | 4.667996e-53 | -8.615850e-47 |
| Msa0171290 | Msa0896540 | 0.828883 | 7.016300e-55 | -8.615850e-47 |
| Msa0173890 | Msa0896540 | 0.826055 | 3.345762e-54 | -8.615850e-47 |
| Msa0178560 | Msa0896540 | 0.801012 | 1.100752e-48 | -8.615850e-47 |
| Msa0185490 | Msa0896540 | 0.808816 | 2.572030e-50 | -8.615850e-47 |
| Msa0197420 | Msa0896540 | 0.853011 | 3.167822e-61 | -8.615850e-47 |
| Msa0197930 | Msa0896540 | 0.863037 | 3.313035e-64 | -8.615850e-47 |
| Msa0198620 | Msa0896540 | 0.804118 | 2.518691e-49 | -8.615850e-47 |
| Msa0200260 | Msa0896540 | 0.823977 | 1.035631e-53 | -8.615850e-47 |
| Msa0203030 | Msa0896540 | 0.809595 | 1.750859e-50 | -8.615850e-47 |
| Msa0206840 | Msa0896540 | 0.812356 | 4.418391e-51 | -8.615850e-47 |
| Msa0213280 | Msa0896540 | 0.813824 | 2.105160e-51 | -8.615850e-47 |
| Msa0219190 | Msa0896540 | 0.804110 | 2.527984e-49 | -8.615850e-47 |
| Msa0221290 | Msa0896540 | 0.837726 | 4.385400e-57 | -8.615850e-47 |
| Msa0223080 | Msa0896540 | 0.819771 | 9.751637e-53 | -8.615850e-47 |
| Msa0225460 | Msa0896540 | 0.815134 | 1.080250e-51 | -8.615850e-47 |
| Msa0225680 | Msa0896540 | 0.818818 | 1.607152e-52 | -8.615850e-47 |
| Msa0225750 | Msa0896540 | 0.814134 | 1.798058e-51 | -8.615850e-47 |
| Msa0225760 | Msa0896540 | 0.836454 | 9.270494e-57 | -8.615850e-47 |
| Msa0225860 | Msa0896540 | 0.814796 | 1.283391e-51 | -8.615850e-47 |
| Msa0230740 | Msa0896540 | 0.805956 | 1.039298e-49 | -8.615850e-47 |
| Msa0230750 | Msa0896540 | 0.814466 | 1.518707e-51 | -8.615850e-47 |
| Msa0371170 | Msa0896540 | 0.801861 | 7.372745e-49 | -8.615850e-47 |
| Msa0376350 | Msa0896540 | 0.837893 | 3.972076e-57 | -8.615850e-47 |
| Msa0378720 | Msa0896540 | 0.803785 | 2.953353e-49 | -8.615850e-47 |
| Msa0385390 | Msa0896540 | 0.832458 | 9.346395e-56 | -8.615850e-47 |
| Msa0388960 | Msa0896540 | 0.814755 | 1.311009e-51 | -8.615850e-47 |
| Msa0392420 | Msa0896540 | 0.867368 | 1.441490e-65 | -8.615850e-47 |
| Msa0392460 | Msa0896540 | 0.865725 | 4.795829e-65 | -8.615850e-47 |
| Msa0392490 | Msa0896540 | 0.872058 | 4.254926e-67 | -8.615850e-47 |
| Msa0392510 | Msa0896540 | 0.804350 | 2.253399e-49 | -8.615850e-47 |
| Msa0393080 | Msa0896540 | 0.806177 | 9.338153e-50 | -8.615850e-47 |
| Msa0407920 | Msa0896540 | 0.802941 | 4.417549e-49 | -8.615850e-47 |
| Msa0410500 | Msa0896540 | 0.830447 | 2.921525e-55 | -8.615850e-47 |
| Msa0410650 | Msa0896540 | 0.847907 | 8.591128e-60 | -8.615850e-47 |
| Msa0415320 | Msa0896540 | 0.821636 | 3.633646e-53 | -8.615850e-47 |
| Msa0417270 | Msa0896540 | 0.802305 | 5.975428e-49 | -8.615850e-47 |
| Msa0417880 | Msa0896540 | 0.839912 | 1.192829e-57 | -8.615850e-47 |
| Msa0422850 | Msa0896540 | 0.837797 | 4.203911e-57 | -8.615850e-47 |
| Msa0422930 | Msa0896540 | 0.840626 | 7.762066e-58 | -8.615850e-47 |
| Msa0424790 | Msa0896540 | 0.830143 | 3.467193e-55 | -8.615850e-47 |
| Msa0428150 | Msa0896540 | 0.811879 | 5.613074e-51 | -8.615850e-47 |
| Msa0428590 | Msa0896540 | 0.822867 | 1.882504e-53 | -8.615850e-47 |
| Msa0434350 | Msa0896540 | 0.814218 | 1.723185e-51 | -8.615850e-47 |
| Msa0440750 | Msa0896540 | 0.805668 | 1.194426e-49 | -8.615850e-47 |
| Msa0450720 | Msa0896540 | 0.800114 | 1.677687e-48 | -8.615850e-47 |
| Msa0452920 | Msa0896540 | 0.804257 | 2.355607e-49 | -8.615850e-47 |
| Msa0462500 | Msa0896540 | 0.807504 | 4.893522e-50 | -8.615850e-47 |
| Msa0464680 | Msa0896540 | 0.800155 | 1.645744e-48 | -8.615850e-47 |
| Msa0467430 | Msa0896540 | 0.807845 | 4.142178e-50 | -8.615850e-47 |
| Msa0468290 | Msa0896540 | 0.813610 | 2.345599e-51 | -8.615850e-47 |
| Msa0475790 | Msa0896540 | 0.866635 | 2.468442e-65 | -8.615850e-47 |
| Msa0479170 | Msa0896540 | 0.823208 | 1.567679e-53 | -8.615850e-47 |
| Msa0481530 | Msa0896540 | 0.807469 | 4.978879e-50 | -8.615850e-47 |
| Msa0239190 | Msa0896540 | 0.841772 | 3.879730e-58 | -8.615850e-47 |
| Msa0239570 | Msa0896540 | 0.850123 | 2.080463e-60 | -8.615850e-47 |
| Msa0240110 | Msa0896540 | 0.807551 | 4.782460e-50 | -8.615850e-47 |
| Msa0240150 | Msa0896540 | 0.803802 | 2.929758e-49 | -8.615850e-47 |
| Msa0243100 | Msa0896540 | 0.846862 | 1.663289e-59 | -8.615850e-47 |
| Msa0244860 | Msa0896540 | 0.804766 | 1.845500e-49 | -8.615850e-47 |
| Msa0248970 | Msa0896540 | 0.801757 | 7.746245e-49 | -8.615850e-47 |
| Msa0253700 | Msa0896540 | 0.821930 | 3.107524e-53 | -8.615850e-47 |
| Msa0254790 | Msa0896540 | 0.804677 | 1.926197e-49 | -8.615850e-47 |
| Msa0255090 | Msa0896540 | 0.852285 | 5.105070e-61 | -8.615850e-47 |
| Msa0258310 | Msa0896540 | 0.800550 | 1.367228e-48 | -8.615850e-47 |
| Msa0259380 | Msa0896540 | 0.840954 | 6.370535e-58 | -8.615850e-47 |
| Msa0260610 | Msa0896540 | 0.824233 | 9.017020e-54 | -8.615850e-47 |
| Msa0260670 | Msa0896540 | 0.831347 | 1.757270e-55 | -8.615850e-47 |
| Msa0261340 | Msa0896540 | 0.867432 | 1.374433e-65 | -8.615850e-47 |
| Msa0264870 | Msa0896540 | 0.812748 | 3.626261e-51 | -8.615850e-47 |
| Msa0265850 | Msa0896540 | 0.801548 | 8.550482e-49 | -8.615850e-47 |
| Msa0267110 | Msa0896540 | 0.828482 | 8.770785e-55 | -8.615850e-47 |
| Msa0274680 | Msa0896540 | 0.800543 | 1.371637e-48 | -8.615850e-47 |
| Msa0277180 | Msa0896540 | 0.849535 | 3.038934e-60 | -8.615850e-47 |
| Msa0283450 | Msa0896540 | 0.804824 | 1.794855e-49 | -8.615850e-47 |
| Msa0283520 | Msa0896540 | 0.812343 | 4.447095e-51 | -8.615850e-47 |
| Msa0285170 | Msa0896540 | 0.811488 | 6.828229e-51 | -8.615850e-47 |
| Msa0287650 | Msa0896540 | 0.863563 | 2.276806e-64 | -8.615850e-47 |
| Msa0292400 | Msa0896540 | 0.829132 | 6.107021e-55 | -8.615850e-47 |
| Msa0294160 | Msa0896540 | 0.824698 | 7.009753e-54 | -8.615850e-47 |
| Msa0300270 | Msa0896540 | 0.830230 | 3.301496e-55 | -8.615850e-47 |
| Msa0300320 | Msa0896540 | 0.822164 | 2.741869e-53 | -8.615850e-47 |
| Msa0300690 | Msa0896540 | 0.818825 | 1.601093e-52 | -8.615850e-47 |
| Msa0302160 | Msa0896540 | 0.818840 | 1.588863e-52 | -8.615850e-47 |
| Msa0302170 | Msa0896540 | 0.844251 | 8.485307e-59 | -8.615850e-47 |
| Msa0305700 | Msa0896540 | 0.800274 | 1.556486e-48 | -8.615850e-47 |
| Msa0308830 | Msa0896540 | 0.814912 | 1.210034e-51 | -8.615850e-47 |
| Msa0314340 | Msa0896540 | 0.818227 | 2.188508e-52 | -8.615850e-47 |
| Msa0316810 | Msa0896540 | 0.857994 | 1.116982e-62 | -8.615850e-47 |
| Msa0317280 | Msa0896540 | 0.860420 | 2.092304e-63 | -8.615850e-47 |
| Msa0317340 | Msa0896540 | 0.815942 | 7.138447e-52 | -8.615850e-47 |
| Msa0317730 | Msa0896540 | 0.809156 | 2.175218e-50 | -8.615850e-47 |
| Msa0318700 | Msa0896540 | 0.805918 | 1.058486e-49 | -8.615850e-47 |
| Msa0323610 | Msa0896540 | 0.805258 | 1.456031e-49 | -8.615850e-47 |
| Msa0332000 | Msa0896540 | 0.820019 | 8.553937e-53 | -8.615850e-47 |
| Msa0333920 | Msa0896540 | 0.825869 | 3.704953e-54 | -8.615850e-47 |
| Msa0333930 | Msa0896540 | 0.802820 | 4.678257e-49 | -8.615850e-47 |
| Msa0334040 | Msa0896540 | 0.823090 | 1.670530e-53 | -8.615850e-47 |
| Msa0337700 | Msa0896540 | 0.819843 | 9.387690e-53 | -8.615850e-47 |
| Msa0338210 | Msa0896540 | 0.803261 | 3.793924e-49 | -8.615850e-47 |
| Msa0339490 | Msa0896540 | 0.824131 | 9.528829e-54 | -8.615850e-47 |
| Msa0339500 | Msa0896540 | 0.825083 | 5.688602e-54 | -8.615850e-47 |
| Msa0340090 | Msa0896540 | 0.809173 | 2.156649e-50 | -8.615850e-47 |
| Msa0341540 | Msa0896540 | 0.804424 | 2.174500e-49 | -8.615850e-47 |
| Msa0344570 | Msa0896540 | 0.858660 | 7.075181e-63 | -8.615850e-47 |
| Msa0348880 | Msa0896540 | 0.801200 | 1.007340e-48 | -8.615850e-47 |
| Msa0357020 | Msa0896540 | 0.808785 | 2.611214e-50 | -8.615850e-47 |
| Msa0359250 | Msa0896540 | 0.805961 | 1.036452e-49 | -8.615850e-47 |
| Msa0363200 | Msa0896540 | 0.826351 | 2.845580e-54 | -8.615850e-47 |
| Msa0487570 | Msa0896540 | 0.866400 | 2.932218e-65 | -8.615850e-47 |
| Msa0487630 | Msa0896540 | 0.873875 | 1.047487e-67 | -8.615850e-47 |
| Msa0498060 | Msa0896540 | 0.819407 | 1.180745e-52 | -8.615850e-47 |
| Msa0503060 | Msa0896540 | 0.809662 | 1.693629e-50 | -8.615850e-47 |
| Msa0507680 | Msa0896540 | 0.842712 | 2.187745e-58 | -8.615850e-47 |
| Msa0509610 | Msa0896540 | 0.809176 | 2.153228e-50 | -8.615850e-47 |
| Msa0513160 | Msa0896540 | 0.815343 | 9.707409e-52 | -8.615850e-47 |
| Msa0516170 | Msa0896540 | 0.815979 | 7.004738e-52 | -8.615850e-47 |
| Msa0523000 | Msa0896540 | 0.809980 | 1.446666e-50 | -8.615850e-47 |
| Msa0527550 | Msa0896540 | 0.841659 | 4.156177e-58 | -8.615850e-47 |
| Msa0527860 | Msa0896540 | 0.838109 | 3.494657e-57 | -8.615850e-47 |
| Msa0532070 | Msa0896540 | 0.833980 | 3.904929e-56 | -8.615850e-47 |
| Msa0534930 | Msa0896540 | 0.809553 | 1.787444e-50 | -8.615850e-47 |
| Msa0535040 | Msa0896540 | 0.851316 | 9.609901e-61 | -8.615850e-47 |
| Msa0545340 | Msa0896540 | 0.838835 | 2.270500e-57 | -8.615850e-47 |
| Msa0546680 | Msa0896540 | 0.822643 | 2.122081e-53 | -8.615850e-47 |
| Msa0547720 | Msa0896540 | 0.825342 | 4.939193e-54 | -8.615850e-47 |
| Msa0557070 | Msa0896540 | 0.800538 | 1.374886e-48 | -8.615850e-47 |
| Msa0569200 | Msa0896540 | 0.834221 | 3.397351e-56 | -8.615850e-47 |
| Msa0571130 | Msa0896540 | 0.802692 | 4.973300e-49 | -8.615850e-47 |
| Msa0574890 | Msa0896540 | 0.835953 | 1.242433e-56 | -8.615850e-47 |
| Msa0576880 | Msa0896540 | 0.817080 | 3.969848e-52 | -8.615850e-47 |
| Msa0580370 | Msa0896540 | 0.821171 | 4.652413e-53 | -8.615850e-47 |
| Msa0582450 | Msa0896540 | 0.832373 | 9.808494e-56 | -8.615850e-47 |
| Msa0585560 | Msa0896540 | 0.809480 | 1.853267e-50 | -8.615850e-47 |
| Msa0586190 | Msa0896540 | 0.831692 | 1.445188e-55 | -8.615850e-47 |
| Msa0591790 | Msa0896540 | 0.812426 | 4.264651e-51 | -8.615850e-47 |
| Msa0597790 | Msa0896540 | 0.811636 | 6.339994e-51 | -8.615850e-47 |
| Msa0600930 | Msa0896540 | 0.830532 | 2.784977e-55 | -8.615850e-47 |
| Msa0602240 | Msa0896540 | 0.813123 | 3.000801e-51 | -8.615850e-47 |
| Msa0602250 | Msa0896540 | 0.816160 | 6.382421e-52 | -8.615850e-47 |
| Msa0853660 | Msa0896540 | 0.800259 | 1.567275e-48 | -8.615850e-47 |
| Msa0856920 | Msa0896540 | 0.807705 | 4.435982e-50 | -8.615850e-47 |
| Msa0861510 | Msa0896540 | 0.835804 | 1.355534e-56 | -8.615850e-47 |
| Msa0861530 | Msa0896540 | 0.814907 | 1.212861e-51 | -8.615850e-47 |
| Msa0861600 | Msa0896540 | 0.838187 | 3.338271e-57 | -8.615850e-47 |
| Msa0861870 | Msa0896540 | 0.825764 | 3.924093e-54 | -8.615850e-47 |
| Msa0863010 | Msa0896540 | 0.808124 | 3.613860e-50 | -8.615850e-47 |
| Msa0869780 | Msa0896540 | 0.805742 | 1.152463e-49 | -8.615850e-47 |
| Msa0880140 | Msa0896540 | 0.842482 | 2.517330e-58 | -8.615850e-47 |
| Msa0881090 | Msa0896540 | 0.801377 | 9.265261e-49 | -8.615850e-47 |
| Msa0896540 | Msa0896750 | 0.817273 | 3.591739e-52 | -8.615850e-47 |
| Msa0896540 | Msa0896970 | 0.847836 | 8.988202e-60 | -8.615850e-47 |
| Msa0896540 | Msa0903070 | 0.803975 | 2.696825e-49 | -8.615850e-47 |
| Msa0896540 | Msa0908050 | 0.816801 | 4.584451e-52 | -8.615850e-47 |
| Msa0896540 | Msa0909230 | 0.802503 | 5.440880e-49 | -8.615850e-47 |
| Msa0896540 | Msa0910430 | 0.804001 | 2.663099e-49 | -8.615850e-47 |
| Msa0896540 | Msa0925180 | 0.833555 | 4.985614e-56 | -8.615850e-47 |
| Msa0896540 | Msa0930780 | 0.823519 | 1.326240e-53 | -8.615850e-47 |
| Msa0896540 | Msa0936340 | 0.816316 | 5.888706e-52 | -8.615850e-47 |
| Msa0896540 | Msa0936410 | 0.833439 | 5.330826e-56 | -8.615850e-47 |
| Msa0896540 | Msa0944030 | 0.808133 | 3.597127e-50 | -8.615850e-47 |
| Msa0896540 | Msa0944700 | 0.807665 | 4.524925e-50 | -8.615850e-47 |
| Msa0896540 | Msa0944760 | 0.811657 | 6.274958e-51 | -8.615850e-47 |
| Msa0896540 | Msa0944880 | 0.814803 | 1.279382e-51 | -8.615850e-47 |
| Msa0896540 | Msa0945110 | 0.839826 | 1.256154e-57 | -8.615850e-47 |
| Msa0896540 | Msa0948290 | 0.812058 | 5.131534e-51 | -8.615850e-47 |
| Msa0896540 | Msa0961690 | 0.854985 | 8.543345e-62 | -8.615850e-47 |
| Msa0896540 | Msa0967380 | 0.806517 | 7.915688e-50 | -8.615850e-47 |
| Msa0896540 | Msa0969200 | 0.815678 | 8.176117e-52 | -8.615850e-47 |
| Msa0896540 | Msa0973250 | 0.835527 | 1.593111e-56 | -8.615850e-47 |
| Msa0896540 | Msa0996390 | 0.843021 | 1.809595e-58 | -8.615850e-47 |
| Msa0896540 | Msa1004550 | 0.809482 | 1.851588e-50 | -8.615850e-47 |
| Msa0896540 | Msa1004600 | 0.808653 | 2.785944e-50 | -8.615850e-47 |
| Msa0896540 | Msa1005870 | 0.842289 | 2.831964e-58 | -8.615850e-47 |
| Msa0896540 | Msa1013400 | 0.801340 | 9.428840e-49 | -8.615850e-47 |
| Msa0896540 | Msa1019430 | 0.801276 | 9.718412e-49 | -8.615850e-47 |
| Msa0896540 | Msa1019470 | 0.812422 | 4.272913e-51 | -8.615850e-47 |
| Msa0896540 | Msa1020670 | 0.802800 | 4.724460e-49 | -8.615850e-47 |
| Msa0896540 | Msa1021210 | 0.807775 | 4.286315e-50 | -8.615850e-47 |
| Msa0896540 | Msa1024100 | 0.807461 | 4.999268e-50 | -8.615850e-47 |
| Msa0896540 | Msa1029250 | 0.802506 | 5.430918e-49 | -8.615850e-47 |
| Msa0896540 | Msa1037900 | 0.800269 | 1.560001e-48 | -8.615850e-47 |
| Msa0896540 | Msa1037920 | 0.813374 | 2.644449e-51 | -8.615850e-47 |
| Msa0896540 | Msa1041670 | 0.814633 | 1.394907e-51 | -8.615850e-47 |
| Msa0896540 | Msa1043370 | 0.805920 | 1.057288e-49 | -8.615850e-47 |
| Msa0896540 | Msa1045140 | 0.819660 | 1.033385e-52 | -8.615850e-47 |
| Msa0896540 | Msa1047870 | 0.800644 | 1.308265e-48 | -8.615850e-47 |
| Msa0896540 | Msa1047980 | 0.814805 | 1.277941e-51 | -8.615850e-47 |
| Msa0896540 | Msa1048920 | 0.806553 | 7.777548e-50 | -8.615850e-47 |
| Msa0896540 | Msa1050390 | 0.807535 | 4.820787e-50 | -8.615850e-47 |
| Msa0896540 | Msa1050910 | 0.808002 | 3.836246e-50 | -8.615850e-47 |
| Msa0896540 | Msa1051830 | 0.805893 | 1.071342e-49 | -8.615850e-47 |
| Msa0896540 | Msa1063950 | 0.817335 | 3.477874e-52 | -8.615850e-47 |
| Msa0896540 | Msa1066490 | 0.819820 | 9.503287e-53 | -8.615850e-47 |
| Msa0896540 | Msa1070000 | 0.800544 | 1.371493e-48 | -8.615850e-47 |
| Msa0896540 | Msa1078170 | 0.828887 | 7.001075e-55 | -8.615850e-47 |
| Msa0896540 | Msa1085200 | 0.842223 | 2.948158e-58 | -8.615850e-47 |
| Msa0896540 | Msa1092010 | 0.843018 | 1.813916e-58 | -8.615850e-47 |
| Msa0896540 | Msa1093840 | 0.827177 | 1.807123e-54 | -8.615850e-47 |
| Msa0896540 | Msa1102770 | 0.818435 | 1.963429e-52 | -8.615850e-47 |
| Msa0896540 | Msa1103990 | 0.814464 | 1.520547e-51 | -8.615850e-47 |
| Msa0896540 | Msa1108160 | 0.834076 | 3.693524e-56 | -8.615850e-47 |
| Msa0896540 | Msa1123380 | 0.835315 | 1.802451e-56 | -8.615850e-47 |
| Msa0896540 | Msa1125940 | 0.842674 | 2.239150e-58 | -8.615850e-47 |
| Msa0896540 | Msa1128710 | 0.821812 | 3.309476e-53 | -8.615850e-47 |
| Msa0896540 | Msa1129980 | 0.806087 | 9.753248e-50 | -8.615850e-47 |
| Msa0896540 | Msa1132840 | 0.822562 | 2.216174e-53 | -8.615850e-47 |
| Msa0896540 | Msa1135270 | 0.802902 | 4.501177e-49 | -8.615850e-47 |
| Msa0896540 | Msa1139810 | 0.818331 | 2.072876e-52 | -8.615850e-47 |
| Msa0896540 | Msa1140210 | 0.826126 | 3.219536e-54 | -8.615850e-47 |
| Msa0896540 | Msa1140690 | 0.832323 | 1.009138e-55 | -8.615850e-47 |
| Msa0896540 | Msa1147900 | 0.802924 | 4.454218e-49 | -8.615850e-47 |
| Msa0896540 | Msa1151910 | 0.850032 | 2.206786e-60 | -8.615850e-47 |
| Msa0896540 | Msa1157870 | 0.832080 | 1.159291e-55 | -8.615850e-47 |
| Msa0896540 | Msa1166560 | 0.815372 | 9.560129e-52 | -8.615850e-47 |
| Msa0896540 | Msa1168160 | 0.809795 | 1.586030e-50 | -8.615850e-47 |
| Msa0896540 | Msa1169710 | 0.803696 | 3.081230e-49 | -8.615850e-47 |
| Msa0896540 | Msa1172450 | 0.814168 | 1.767313e-51 | -8.615850e-47 |
| Msa0896540 | Msa1189070 | 0.830969 | 2.176637e-55 | -8.615850e-47 |
| Msa0896540 | Msa1193290 | 0.827180 | 1.803406e-54 | -8.615850e-47 |
| Msa0896540 | Msa1196440 | 0.837754 | 4.314108e-57 | -8.615850e-47 |
| Msa0896540 | Msa1199570 | 0.839287 | 1.734050e-57 | -8.615850e-47 |
| Msa0896540 | Msa1199830 | -0.801232 | 9.924557e-49 | -8.615850e-47 |
| Msa0896540 | Msa1209460 | 0.833516 | 5.100208e-56 | -8.615850e-47 |
| Msa0896540 | Msa1213360 | 0.805356 | 1.389059e-49 | -8.615850e-47 |
| Msa0896540 | Msa1213420 | 0.808051 | 3.743909e-50 | -8.615850e-47 |
| Msa0896540 | Msa1218600 | 0.801106 | 1.052889e-48 | -8.615850e-47 |
| Msa0896540 | Msa1221060 | 0.829826 | 4.143072e-55 | -8.615850e-47 |
| Msa0896540 | Msa1228200 | 0.810708 | 1.007618e-50 | -8.615850e-47 |
| Msa0896540 | Msa1230520 | 0.805854 | 1.091498e-49 | -8.615850e-47 |
| Msa0896540 | Msa1232710 | 0.812061 | 5.124588e-51 | -8.615850e-47 |
| Msa0896540 | Msa1239920 | 0.806728 | 7.143874e-50 | -8.615850e-47 |
| Msa0896540 | Msa1251160 | 0.827719 | 1.339110e-54 | -8.615850e-47 |
| Msa0896540 | Msa1252190 | 0.826464 | 2.674031e-54 | -8.615850e-47 |
| Msa0896540 | Msa1264710 | 0.824910 | 6.249401e-54 | -8.615850e-47 |
| Msa0896540 | Msa1267900 | 0.813686 | 2.257430e-51 | -8.615850e-47 |
| Msa0896540 | Msa1269480 | 0.805871 | 1.082831e-49 | -8.615850e-47 |
| Msa0896540 | Msa1271990 | 0.802922 | 4.457291e-49 | -8.615850e-47 |
| Msa0896540 | Msa1276660 | 0.827944 | 1.182263e-54 | -8.615850e-47 |
| Msa0896540 | Msa1284550 | 0.828457 | 8.896313e-55 | -8.615850e-47 |
| Msa0896540 | Msa1292830 | 0.810831 | 9.476558e-51 | -8.615850e-47 |
| Msa0896540 | Msa1294920 | 0.801624 | 8.246504e-49 | -8.615850e-47 |
| Msa0896540 | Msa1298370 | 0.800175 | 1.629999e-48 | -8.615850e-47 |
| Msa0896540 | Msa1300490 | 0.805614 | 1.226000e-49 | -8.615850e-47 |
| Msa0896540 | Msa1302830 | 0.801587 | 8.390925e-49 | -8.615850e-47 |
| Msa0896540 | Msa1303240 | 0.820289 | 7.419341e-53 | -8.615850e-47 |
| Msa0896540 | Msa1303250 | 0.851858 | 6.748185e-61 | -8.615850e-47 |
| Msa0896540 | Msa1313150 | 0.816072 | 6.677942e-52 | -8.615850e-47 |
| Msa0896540 | Msa1313300 | 0.807505 | 4.891376e-50 | -8.615850e-47 |
| Msa0896540 | Msa1320740 | 0.800146 | 1.652204e-48 | -8.615850e-47 |
| Msa0896540 | Msa1328640 | 0.805402 | 1.358417e-49 | -8.615850e-47 |
| Msa0896540 | Msa1328710 | 0.842526 | 2.450234e-58 | -8.615850e-47 |
| Msa0896540 | Msa1346280 | 0.820751 | 5.812933e-53 | -8.615850e-47 |
| Msa0896540 | Msa1346370 | 0.806614 | 7.551722e-50 | -8.615850e-47 |
| Msa0896540 | Msa1353060 | 0.810355 | 1.201034e-50 | -8.615850e-47 |
| Msa0896540 | Msa1356830 | 0.808098 | 3.659083e-50 | -8.615850e-47 |
| Msa0896540 | Msa1357240 | 0.831254 | 1.853082e-55 | -8.615850e-47 |
| Msa0896540 | Msa1361400 | 0.839027 | 2.025748e-57 | -8.615850e-47 |
| Msa0896540 | Msa1361410 | 0.832787 | 7.743684e-56 | -8.615850e-47 |
| Msa0896540 | Msa1369150 | 0.828509 | 8.639961e-55 | -8.615850e-47 |
| Msa0896540 | Msa1372230 | 0.823521 | 1.324462e-53 | -8.615850e-47 |
| Msa0896540 | Msa1372760 | 0.800060 | 1.720275e-48 | -8.615850e-47 |
| Msa0896540 | Msa1373100 | 0.825004 | 5.935507e-54 | -8.615850e-47 |
| Msa0896540 | Msa1374040 | 0.859806 | 3.205930e-63 | -8.615850e-47 |
| Msa0896540 | Msa1374060 | 0.805775 | 1.134465e-49 | -8.615850e-47 |
| Msa0896540 | Msa1374550 | 0.861405 | 1.049647e-63 | -8.615850e-47 |
| Msa0896540 | Msa1382560 | 0.804880 | 1.746586e-49 | -8.615850e-47 |
| Msa0896540 | Msa1391770 | 0.818911 | 1.530577e-52 | -8.615850e-47 |
| Msa0896540 | Msa1402400 | 0.813547 | 2.421746e-51 | -8.615850e-47 |
| Msa0896540 | Msa1409870 | 0.805572 | 1.251138e-49 | -8.615850e-47 |
| Msa0896540 | Msa1421550 | 0.803722 | 3.043152e-49 | -8.615850e-47 |
| Msa0896540 | Msa1422950 | 0.824652 | 7.188296e-54 | -8.615850e-47 |
| Msa0896540 | Msa1423460 | 0.809646 | 1.707216e-50 | -8.615850e-47 |
| Msa0896540 | Msa1423880 | 0.811297 | 7.512936e-51 | -8.615850e-47 |
| Msa0896540 | Msa1430240 | 0.840413 | 8.824970e-58 | -8.615850e-47 |
| Msa0896540 | Msa1437940 | 0.815595 | 8.530687e-52 | -8.615850e-47 |
| Msa0896540 | Msa1439610 | 0.814934 | 1.196038e-51 | -8.615850e-47 |
| Msa0896540 | Msa1440960 | 0.808401 | 3.153224e-50 | -8.615850e-47 |
| Msa0896540 | Msa1445190 | 0.815044 | 1.130726e-51 | -8.615850e-47 |
| Msa0896540 | Msa1446810 | 0.833588 | 4.893960e-56 | -8.615850e-47 |
| Msa0896540 | Msa1446820 | 0.822668 | 2.094548e-53 | -8.615850e-47 |
| Msa0896540 | Msa1451160 | 0.837819 | 4.149310e-57 | -8.615850e-47 |
| Msa0896540 | Msa1454140 | 0.807627 | 4.609628e-50 | -8.615850e-47 |
| Msa0896540 | Msa1457910 | 0.804274 | 2.336980e-49 | -8.615850e-47 |
| Msa0896540 | Msa1459380 | 0.812271 | 4.611204e-51 | -8.615850e-47 |
| Msa0896540 | Msa1459690 | 0.828822 | 7.259473e-55 | -8.615850e-47 |
| Msa0896540 | Msa1460020 | 0.832054 | 1.176372e-55 | -8.615850e-47 |
| Msa0896540 | Msa1465440 | 0.804816 | 1.800978e-49 | -8.615850e-47 |
| Msa0896540 | Msa1466920 | 0.825596 | 4.300267e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0896540 | MtrunA17_Chr6g0481301 | 98.378 | 370 | 6 | 0 | 1 | 370 | 1 | 370 | 0.0 | 751 |
| Msa0896540 | MtrunA17_Chr5g0394641 | 33.673 | 98 | 51 | 4 | 37 | 130 | 19 | 106 | 5.96e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0896540 | AT1G48405.1 | 33.083 | 266 | 148 | 3 | 41 | 306 | 7 | 242 | 6.24e-39 | 140 |
| Msa0896540 | AT3G17680.1 | 42.259 | 239 | 124 | 5 | 45 | 277 | 12 | 242 | 2.99e-34 | 129 |
| Msa0896540 | AT3G17680.3 | 42.259 | 239 | 124 | 5 | 45 | 277 | 44 | 274 | 5.56e-34 | 129 |
| Msa0896540 | AT3G17680.2 | 41.702 | 235 | 123 | 5 | 49 | 277 | 60 | 286 | 4.17e-32 | 124 |
| Msa0896540 | AT1G03470.2 | 37.647 | 85 | 46 | 3 | 34 | 115 | 13 | 93 | 2.27e-11 | 64.3 |
| Msa0896540 | AT1G03470.3 | 37.647 | 85 | 46 | 3 | 34 | 115 | 13 | 93 | 2.27e-11 | 64.3 |
| Msa0896540 | AT1G03470.1 | 37.647 | 85 | 46 | 3 | 34 | 115 | 13 | 93 | 2.27e-11 | 64.3 |
| Msa0896540 | AT1G03470.4 | 37.647 | 85 | 46 | 3 | 34 | 115 | 13 | 93 | 2.27e-11 | 64.3 |
| Msa0896540 | AT1G03080.3 | 33.028 | 109 | 57 | 5 | 32 | 137 | 17 | 112 | 7.99e-11 | 64.3 |
| Msa0896540 | AT1G03080.1 | 33.028 | 109 | 57 | 5 | 32 | 137 | 17 | 112 | 7.99e-11 | 64.3 |
| Msa0896540 | AT1G03080.2 | 33.028 | 109 | 57 | 5 | 32 | 137 | 17 | 112 | 7.99e-11 | 64.3 |
Find 89 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGCTTCTCACCAGCATTTC+TGG | 0.111146 | 6_1:+86720280 | Msa0896540:CDS |
| TTGATTTCTTCATGCATAAA+AGG | 0.151774 | 6_1:+86720217 | Msa0896540:CDS |
| AGTAGTAATAGTAGATTTCT+AGG | 0.224081 | 6_1:+86724603 | Msa0896540:three_prime_UTR |
| TCTTTCCACTTAAACCTTCT+AGG | 0.230863 | 6_1:-86724369 | None:intergenic |
| CCTTGTGTAGAGGGGCTTAT+AGG | 0.278491 | 6_1:+86720119 | None:intergenic |
| GGTTTGAGTTATAGAGTTAA+TGG | 0.288202 | 6_1:+86724057 | Msa0896540:CDS |
| AAAGTATACATATAAATCTT+TGG | 0.360180 | 6_1:-86724564 | None:intergenic |
| AGAAGAGAGAGTCAAGAAAA+TGG | 0.366420 | 6_1:+86724273 | Msa0896540:CDS |
| GAAGAGTTTGCTTGAGGTGC+TGG | 0.369627 | 6_1:+86723999 | Msa0896540:CDS |
| AAGAAGAAGGAAATTCTTCT+AGG | 0.372880 | 6_1:+86724388 | Msa0896540:CDS |
| TAGGTTACTAAGCATGTGTT+TGG | 0.380988 | 6_1:+86724622 | Msa0896540:three_prime_UTR |
| AAAGTAGTTGAGGTCTCTTT+TGG | 0.388432 | 6_1:-86723630 | None:intergenic |
| TTCATATCCACAATAATGTT+GGG | 0.408849 | 6_1:-86720166 | None:intergenic |
| TCAAGGACAGATACATGGTT+TGG | 0.408986 | 6_1:+86724215 | Msa0896540:CDS |
| CAAGTTTCAACTTTGGAAGA+AGG | 0.410477 | 6_1:+86723748 | Msa0896540:CDS |
| TTCAAATGGAGAAGCCTAGA+AGG | 0.411732 | 6_1:+86724355 | Msa0896540:CDS |
| ACAAATGTTGCCATTGATGA+AGG | 0.414356 | 6_1:+86723846 | Msa0896540:CDS |
| AGGATGAAAATGTTGGCAAT+TGG | 0.428892 | 6_1:+86723550 | Msa0896540:CDS |
| CTCTTCACAAGTTTCAACTT+TGG | 0.429231 | 6_1:+86723741 | Msa0896540:CDS |
| TGGTGGTAGATTTGGAAGAA+AGG | 0.431166 | 6_1:+86723530 | Msa0896540:intron |
| GTTCATATCCACAATAATGT+TGG | 0.442137 | 6_1:-86720167 | None:intergenic |
| GATCAAGAAGAAGTTATTAG+TGG | 0.443016 | 6_1:+86723778 | Msa0896540:CDS |
| CCACCAACAACATGCCCTCC+TGG | 0.444437 | 6_1:+86720260 | Msa0896540:CDS |
| TGGCGGTGAAGGAATAGCTT+TGG | 0.449383 | 6_1:+86724323 | Msa0896540:CDS |
| GAAAGTATTGCGAGTCTTCG+AGG | 0.458677 | 6_1:+86723962 | Msa0896540:CDS |
| GAAATCGCAGCAAAAGCATA+TGG | 0.462751 | 6_1:-86724678 | None:intergenic |
| TGGTGTGAGTCAAGTTGATT+CGG | 0.464121 | 6_1:+86723798 | Msa0896540:CDS |
| TGATTTCTTCATGCATAAAA+GGG | 0.465405 | 6_1:+86720218 | Msa0896540:CDS |
| GGAAGAAAGGATGAAAATGT+TGG | 0.467904 | 6_1:+86723543 | Msa0896540:CDS |
| TCTACAATTAGTTTATCAAA+AGG | 0.468091 | 6_1:-86724764 | None:intergenic |
| AAACATAACTACACAGAACT+TGG | 0.470956 | 6_1:-86724960 | None:intergenic |
| TTTGGAAGTTCATGTTCAAA+TGG | 0.473753 | 6_1:+86724341 | Msa0896540:CDS |
| TTTGCCTCTAGTATTATAGC+TGG | 0.478070 | 6_1:+86724817 | Msa0896540:three_prime_UTR |
| CAAGAAAATGGCGGTTGTAT+CGG | 0.480959 | 6_1:+86724285 | Msa0896540:CDS |
| ACAAATGAAGAAGAAGAAGA+AGG | 0.483902 | 6_1:+86723574 | Msa0896540:CDS |
| TAAATACATACCAGAAATGC+TGG | 0.485585 | 6_1:-86720290 | None:intergenic |
| CTTCTGCATGATTTGTACAA+TGG | 0.492890 | 6_1:+86723655 | Msa0896540:CDS |
| AGGTTTAAGTGGAAAGAAGA+AGG | 0.501263 | 6_1:+86724375 | Msa0896540:CDS |
| GGTTCATGAGGTTGGTGTCA+TGG | 0.507161 | 6_1:+86723936 | Msa0896540:CDS |
| GCCATTGATGAAGGGTTCCA+TGG | 0.510454 | 6_1:+86723855 | Msa0896540:CDS |
| TGCGCTTGATCTTGATCAGA+CGG | 0.511806 | 6_1:+86724495 | Msa0896540:exon |
| AGATACATGGTTTGGAGAAG+AGG | 0.513312 | 6_1:+86724223 | Msa0896540:CDS |
| GGCGGTTGTATCGGCAACAA+AGG | 0.518796 | 6_1:+86724294 | Msa0896540:CDS |
| AGAAATGCTGGTGAGAAGCC+AGG | 0.522647 | 6_1:-86720278 | None:intergenic |
| ACCATGGAACCCTTCATCAA+TGG | 0.524354 | 6_1:-86723856 | None:intergenic |
| GCCTCTAGTATTATAGCTGG+TGG | 0.528981 | 6_1:+86724820 | Msa0896540:three_prime_UTR |
| GAGTTATAGAGTTAATGGTT+TGG | 0.530044 | 6_1:+86724062 | Msa0896540:CDS |
| AAAGGGAAGAATGGCGGTGA+AGG | 0.530751 | 6_1:+86724312 | Msa0896540:CDS |
| GATCTTCAAGGACAGATACA+TGG | 0.532234 | 6_1:+86724210 | Msa0896540:CDS |
| TCGCAGCAAAAGCATATGGT+TGG | 0.543610 | 6_1:-86724674 | None:intergenic |
| GCAAGGGATATTGATGGAGA+AGG | 0.547971 | 6_1:+86720141 | Msa0896540:exon |
| AGAAGCCTAGAAGGTTTAAG+TGG | 0.552094 | 6_1:+86724364 | Msa0896540:CDS |
| AGCTATAATACTAGAGGCAA+AGG | 0.553045 | 6_1:-86724815 | None:intergenic |
| ATAGAGTTTATCTATTGCAT+AGG | 0.555558 | 6_1:+86724178 | Msa0896540:CDS |
| TTATAGGCAAGGGATATTGA+TGG | 0.556980 | 6_1:+86720135 | Msa0896540:exon |
| GATCAAGATCAAGCGCAAGT+TGG | 0.564528 | 6_1:-86724489 | None:intergenic |
| CAAGGGATATTGATGGAGAA+GGG | 0.564640 | 6_1:+86720142 | Msa0896540:exon |
| CCAGGAGGGCATGTTGTTGG+TGG | 0.564949 | 6_1:-86720260 | None:intergenic |
| CAAAGAGCTTGCGTCCGAGT+CGG | 0.566207 | 6_1:+86724095 | Msa0896540:CDS |
| TGCAGAAGAGAAAGTAGTTG+AGG | 0.566991 | 6_1:-86723640 | None:intergenic |
| ATCGGCAACAAAGGGAAGAA+TGG | 0.569240 | 6_1:+86724303 | Msa0896540:CDS |
| CAAATGTTGCCATTGATGAA+GGG | 0.570533 | 6_1:+86723847 | Msa0896540:CDS |
| AAGCCAGGAGGGCATGTTGT+TGG | 0.572709 | 6_1:-86720263 | None:intergenic |
| TGTAGAGGGGCTTATAGGCA+AGG | 0.584632 | 6_1:+86720124 | None:intergenic |
| AGGAAGATTGAAGATCTTCA+AGG | 0.588415 | 6_1:+86724198 | Msa0896540:CDS |
| GCGGTTGTATCGGCAACAAA+GGG | 0.593239 | 6_1:+86724295 | Msa0896540:CDS |
| AAGTGTCTGTATATATCGAT+CGG | 0.595319 | 6_1:-86723692 | None:intergenic |
| AACATGGACTTGTTGCTATG+TGG | 0.596720 | 6_1:+86724459 | Msa0896540:CDS |
| CTAAGTGTGTGCTGAAGATG+AGG | 0.598254 | 6_1:+86724148 | Msa0896540:CDS |
| GAAGGGACCCAACATTATTG+TGG | 0.599311 | 6_1:+86720159 | Msa0896540:CDS |
| ACATGGACTTGTTGCTATGT+GGG | 0.605405 | 6_1:+86724460 | Msa0896540:CDS |
| GTTACAGAAGAGTTTGCTTG+AGG | 0.610285 | 6_1:+86723993 | Msa0896540:CDS |
| TTGATCAGACGGTTCAGATG+TGG | 0.617813 | 6_1:+86724506 | Msa0896540:three_prime_UTR |
| TCTCTTGATGAAAACCGACT+CGG | 0.619580 | 6_1:-86724109 | None:intergenic |
| ATGCTGGTGAGAAGCCAGGA+GGG | 0.624757 | 6_1:-86720274 | None:intergenic |
| CACACACTTAGCTAACTCAC+CGG | 0.626155 | 6_1:-86724136 | None:intergenic |
| AATTGCATCAACATCAACCA+TGG | 0.628092 | 6_1:-86723872 | None:intergenic |
| ACCACGTGATTGTACGTAGT+CGG | 0.637839 | 6_1:-86724529 | None:intergenic |
| GTAGAGGGGCTTATAGGCAA+GGG | 0.650679 | 6_1:+86720125 | None:intergenic |
| TGTTATGCATCATCAAACAA+TGG | 0.651527 | 6_1:+86724868 | Msa0896540:three_prime_UTR |
| ACCACCAGCTATAATACTAG+AGG | 0.659287 | 6_1:-86724821 | None:intergenic |
| GGAACAAGGAGTATTATGAG+AGG | 0.665037 | 6_1:+86724244 | Msa0896540:CDS |
| GGCAACAAAGGGAAGAATGG+CGG | 0.694360 | 6_1:+86724306 | Msa0896540:CDS |
| AATGCTGGTGAGAAGCCAGG+AGG | 0.697605 | 6_1:-86720275 | None:intergenic |
| TGGTTTGGAGAAGAGGAACA+AGG | 0.704148 | 6_1:+86724230 | Msa0896540:CDS |
| GCCGACTACGTACAATCACG+TGG | 0.714108 | 6_1:+86724528 | Msa0896540:three_prime_UTR |
| AGAGAGAGTCAAGAAAATGG+CGG | 0.718855 | 6_1:+86724276 | Msa0896540:CDS |
| GTGTGTGCTGAAGATGAGGG+AGG | 0.735654 | 6_1:+86724152 | Msa0896540:CDS |
| TAAGTGTGTGCTGAAGATGA+GGG | 0.745974 | 6_1:+86724149 | Msa0896540:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATGAAATGAAATTTTTTTT+TGG | + | chr6_1:86720950-86720969 | Msa0896540:intron | 10.0% |
| !!! | AGTTGTATTTTTTATTTTTA+TGG | + | chr6_1:86723348-86723367 | Msa0896540:intron | 10.0% |
| !!! | TGAAATTTTTTTTGTCAATA+AGG | - | chr6_1:86720644-86720663 | None:intergenic | 15.0% |
| !! | TTAGATTAATAATTCTCATA+GGG | - | chr6_1:86720675-86720694 | None:intergenic | 15.0% |
| !! | TTTAGATTAATAATTCTCAT+AGG | - | chr6_1:86720676-86720695 | None:intergenic | 15.0% |
| !! | AATTTCTCATTTATTACTAT+AGG | - | chr6_1:86721322-86721341 | None:intergenic | 15.0% |
| !! | TTAAATTCATATATCAATCT+AGG | - | chr6_1:86721709-86721728 | None:intergenic | 15.0% |
| !!! | GGTTTAAAATACTATATTAT+AGG | - | chr6_1:86722222-86722241 | None:intergenic | 15.0% |
| !!! | AAGAAACTTTATTATAGTTT+TGG | + | chr6_1:86722704-86722723 | Msa0896540:intron | 15.0% |
| !! | TATGACAAAAATAATAATGT+AGG | - | chr6_1:86723042-86723061 | None:intergenic | 15.0% |
| !! | AAATAAAAAATTCTCTTACA+TGG | - | chr6_1:86723399-86723418 | None:intergenic | 15.0% |
| !!! | TTTAATGTTTTTTTTCTTCA+TGG | + | chr6_1:86723446-86723465 | Msa0896540:intron | 15.0% |
| !! | AAAGTATACATATAAATCTT+TGG | - | chr6_1:86724567-86724586 | None:intergenic | 15.0% |
| !!! | AGATTTATATGTATACTTTT+TGG | + | chr6_1:86724568-86724587 | Msa0896540:three_prime_UTR | 15.0% |
| !! | TGAAGAAATTAATATAGGTA+CGG | - | chr6_1:86720326-86720345 | None:intergenic | 20.0% |
| !!! | GTTCATTCTTTTATTTTTAC+CGG | + | chr6_1:86720440-86720459 | Msa0896540:intron | 20.0% |
| !! | ACAAATTGTAAGACATAAAT+TGG | + | chr6_1:86720518-86720537 | Msa0896540:intron | 20.0% |
| !! | TAGATTAATAATTCTCATAG+GGG | - | chr6_1:86720674-86720693 | None:intergenic | 20.0% |
| !! | GACAAAATAAAAACTAAAAG+TGG | - | chr6_1:86720703-86720722 | None:intergenic | 20.0% |
| !! | TTTATGTTAATAATTCTCGT+AGG | + | chr6_1:86720925-86720944 | Msa0896540:intron | 20.0% |
| !! | TTATGTTAATAATTCTCGTA+GGG | + | chr6_1:86720926-86720945 | Msa0896540:intron | 20.0% |
| !!! | GAAATTTTTTTTTGGCAATA+AGG | + | chr6_1:86720958-86720977 | Msa0896540:intron | 20.0% |
| !! | AGGAAAAAAATATATTCTTG+AGG | + | chr6_1:86720983-86721002 | Msa0896540:intron | 20.0% |
| !! | TCTTTCAAAAAAAACCAAAT+AGG | + | chr6_1:86721225-86721244 | Msa0896540:intron | 20.0% |
| !!! | TAATTTTCTTGTTCCATTTA+TGG | - | chr6_1:86721358-86721377 | None:intergenic | 20.0% |
| !! | TAGAAAAATGTTGTATTGTA+AGG | - | chr6_1:86721481-86721500 | None:intergenic | 20.0% |
| !!! | ATTTTTCTATCAATCATCAA+TGG | + | chr6_1:86721492-86721511 | Msa0896540:intron | 20.0% |
| !!! | TTTTTCTATCAATCATCAAT+GGG | + | chr6_1:86721493-86721512 | Msa0896540:intron | 20.0% |
| !! | ATATAATGTGGTTATAGTAT+AGG | + | chr6_1:86722008-86722027 | Msa0896540:intron | 20.0% |
| !! | TATAATGTGGTTATAGTATA+GGG | + | chr6_1:86722009-86722028 | Msa0896540:intron | 20.0% |
| !! | AATCATATAAATCACATCAT+TGG | - | chr6_1:86722133-86722152 | None:intergenic | 20.0% |
| !! | AATTAATCACAAATTAGACA+CGG | - | chr6_1:86722289-86722308 | None:intergenic | 20.0% |
| !!! | AATGTAAGAATCTTTTTCAT+AGG | + | chr6_1:86722462-86722481 | Msa0896540:intron | 20.0% |
| !! | AAAATTGGTATGTAAAGTTA+TGG | - | chr6_1:86722655-86722674 | None:intergenic | 20.0% |
| !!! | TTTCTTTGAAAAACGAAAAT+TGG | - | chr6_1:86722670-86722689 | None:intergenic | 20.0% |
| !! | CTATAATAAAGTTTCTTCAT+TGG | - | chr6_1:86722701-86722720 | None:intergenic | 20.0% |
| !! | ACAAAAACCATAAATAATTC+TGG | - | chr6_1:86723096-86723115 | None:intergenic | 20.0% |
| !!! | TCTACAATTAGTTTATCAAA+AGG | - | chr6_1:86724767-86724786 | None:intergenic | 20.0% |
| !!! | TGCATAACATAATTTTGTTA+AGG | - | chr6_1:86724857-86724876 | None:intergenic | 20.0% |
| ! | TTCATATCCACAATAATGTT+GGG | - | chr6_1:86720169-86720188 | None:intergenic | 25.0% |
| ! | TTGATTTCTTCATGCATAAA+AGG | + | chr6_1:86720217-86720236 | Msa0896540:CDS | 25.0% |
| ! | TGATTTCTTCATGCATAAAA+GGG | + | chr6_1:86720218-86720237 | Msa0896540:CDS | 25.0% |
| ! | CGTCATGAAGAAATTAATAT+AGG | - | chr6_1:86720331-86720350 | None:intergenic | 25.0% |
| ! | ATATGATTGAACTATTCAAC+CGG | - | chr6_1:86720462-86720481 | None:intergenic | 25.0% |
| !!! | CAACTATGTTTGAGATTTTA+AGG | - | chr6_1:86720545-86720564 | None:intergenic | 25.0% |
| !!! | TTAGTTTTTATTTTGTCCTG+TGG | + | chr6_1:86720706-86720725 | Msa0896540:intron | 25.0% |
| ! | ATTACAACCAAATGTAATGA+CGG | + | chr6_1:86720734-86720753 | Msa0896540:intron | 25.0% |
| !!! | TTTTTTTTAAACAGTTGTCC+AGG | - | chr6_1:86720806-86720825 | None:intergenic | 25.0% |
| ! | GGACAACTGTTTAAAAAAAA+CGG | + | chr6_1:86720806-86720825 | Msa0896540:intron | 25.0% |
| ! | TATGTTAATAATTCTCGTAG+GGG | + | chr6_1:86720927-86720946 | Msa0896540:intron | 25.0% |
| !!! | TTTTTTTTGGCAATAAGGTT+AGG | + | chr6_1:86720963-86720982 | Msa0896540:intron | 25.0% |
| ! | ACTAGTTATCTGATTTCAAA+TGG | - | chr6_1:86721164-86721183 | None:intergenic | 25.0% |
| ! | CTATATCAATGACATCAAAT+TGG | - | chr6_1:86721268-86721287 | None:intergenic | 25.0% |
| ! | CAATTTGATGTCATTGATAT+AGG | + | chr6_1:86721266-86721285 | Msa0896540:intron | 25.0% |
| ! | GTGAAGAAATCTGAATTAAA+TGG | + | chr6_1:86721418-86721437 | Msa0896540:intron | 25.0% |
| ! | TGAGTAAAAATGTAGTAACA+TGG | - | chr6_1:86721650-86721669 | None:intergenic | 25.0% |
| ! | AGACAATATAATACTACTTG+TGG | - | chr6_1:86722046-86722065 | None:intergenic | 25.0% |
| ! | ATCCAAAACAAACATATTGT+AGG | - | chr6_1:86722258-86722277 | None:intergenic | 25.0% |
| ! | ACAATGTTGTAGAATAGTAT+AGG | - | chr6_1:86722985-86723004 | None:intergenic | 25.0% |
| ! | TGTACTACCAGAATTATTTA+TGG | + | chr6_1:86723086-86723105 | Msa0896540:intron | 25.0% |
| ! | CAAACAAAGACACAATAAAA+GGG | - | chr6_1:86723126-86723145 | None:intergenic | 25.0% |
| !!! | AAGTTGTGTTTTTTTCTTCA+TGG | + | chr6_1:86723246-86723265 | Msa0896540:intron | 25.0% |
| !!! | TTTTTATGGTTTTGTACCTA+TGG | + | chr6_1:86723362-86723381 | Msa0896540:intron | 25.0% |
| ! | ATGTGAACTTGGTTTATTTA+TGG | + | chr6_1:86723510-86723529 | Msa0896540:intron | 25.0% |
| ! | TTTATTTATGGTGGTAGATT+TGG | + | chr6_1:86723522-86723541 | Msa0896540:intron | 25.0% |
| !!! | GAATGTTATGTGTGATTTTT+TGG | + | chr6_1:86723915-86723934 | Msa0896540:CDS | 25.0% |
| ! | ATAGAGTTTATCTATTGCAT+AGG | + | chr6_1:86724178-86724197 | Msa0896540:CDS | 25.0% |
| ! | AGTAGTAATAGTAGATTTCT+AGG | + | chr6_1:86724603-86724622 | Msa0896540:three_prime_UTR | 25.0% |
| !! | AAAATCAAGCTTTTAAGCTA+TGG | + | chr6_1:86724712-86724731 | Msa0896540:three_prime_UTR | 25.0% |
| GTTCATATCCACAATAATGT+TGG | - | chr6_1:86720170-86720189 | None:intergenic | 30.0% | |
| TAAATACATACCAGAAATGC+TGG | - | chr6_1:86720293-86720312 | None:intergenic | 30.0% | |
| AATGTGAACTAGAGAAATGT+AGG | + | chr6_1:86720361-86720380 | Msa0896540:intron | 30.0% | |
| ATGTGAACTAGAGAAATGTA+GGG | + | chr6_1:86720362-86720381 | Msa0896540:intron | 30.0% | |
| AGTTGAATTATCCCTTTGTA+AGG | + | chr6_1:86720560-86720579 | Msa0896540:intron | 30.0% | |
| ! | AATCAAACCTACCATCTTTT+AGG | - | chr6_1:86720597-86720616 | None:intergenic | 30.0% |
| TTCCAACCAATATTTGATCT+CGG | + | chr6_1:86721098-86721117 | Msa0896540:intron | 30.0% | |
| ATGAATCCGAGATCAAATAT+TGG | - | chr6_1:86721107-86721126 | None:intergenic | 30.0% | |
| AAAAGAAAGTGACACCTATT+TGG | - | chr6_1:86721242-86721261 | None:intergenic | 30.0% | |
| TTTCAAAAGCTTGCCATAAA+TGG | + | chr6_1:86721342-86721361 | Msa0896540:intron | 30.0% | |
| TTCAGTATCATACAGTATGA+TGG | - | chr6_1:86721549-86721568 | None:intergenic | 30.0% | |
| ACATGGTATACAATGATGTA+CGG | - | chr6_1:86721633-86721652 | None:intergenic | 30.0% | |
| !! | TTGAAGTGTTGCTAATAGAT+TGG | + | chr6_1:86721979-86721998 | Msa0896540:intron | 30.0% |
| ! | GATTGGTGGTTAATATAATG+TGG | + | chr6_1:86721996-86722015 | Msa0896540:intron | 30.0% |
| AACATATTGTAGGACAACAA+AGG | - | chr6_1:86722248-86722267 | None:intergenic | 30.0% | |
| ! | GTCCTACAATATGTTTGTTT+TGG | + | chr6_1:86722253-86722272 | Msa0896540:intron | 30.0% |
| !! | ATGTGTCAATCTTTTTCACA+TGG | + | chr6_1:86722439-86722458 | Msa0896540:intron | 30.0% |
| AATCTTGGTTGAAATCAGAT+TGG | - | chr6_1:86722548-86722567 | None:intergenic | 30.0% | |
| TTATGGCAAAGGTTAAAGAA+AGG | - | chr6_1:86722638-86722657 | None:intergenic | 30.0% | |
| GTACTTCAAATATGTTGATG+TGG | - | chr6_1:86722731-86722750 | None:intergenic | 30.0% | |
| TGGGAAATGTGTAATTCTAA+CGG | - | chr6_1:86722793-86722812 | None:intergenic | 30.0% | |
| ACAAGACATGAGGATAAAAT+GGG | - | chr6_1:86722812-86722831 | None:intergenic | 30.0% | |
| GTTGTAGAATAGTATAGGTT+AGG | - | chr6_1:86722980-86722999 | None:intergenic | 30.0% | |
| CCAAACAAAGACACAATAAA+AGG | - | chr6_1:86723127-86723146 | None:intergenic | 30.0% | |
| ! | CCTTTTATTGTGTCTTTGTT+TGG | + | chr6_1:86723124-86723143 | Msa0896540:intron | 30.0% |
| ATATAGACCAGATCTCAATA+AGG | - | chr6_1:86723187-86723206 | None:intergenic | 30.0% | |
| ! | GGTCTATATTAACCTTCTTT+TGG | + | chr6_1:86723198-86723217 | Msa0896540:intron | 30.0% |
| !!! | TCTTCATGGTTTTGAAGTTA+TGG | + | chr6_1:86723460-86723479 | Msa0896540:intron | 30.0% |
| TACTAACTCAAATGTGAACT+TGG | + | chr6_1:86723499-86723518 | Msa0896540:intron | 30.0% | |
| TGAACTTGGTTTATTTATGG+TGG | + | chr6_1:86723513-86723532 | Msa0896540:intron | 30.0% | |
| ACAAATGAAGAAGAAGAAGA+AGG | + | chr6_1:86723574-86723593 | Msa0896540:CDS | 30.0% | |
| CAAATGAAGAAGAAGAAGAA+GGG | + | chr6_1:86723575-86723594 | Msa0896540:CDS | 30.0% | |
| AAATGAAGAAGAAGAAGAAG+GGG | + | chr6_1:86723576-86723595 | Msa0896540:CDS | 30.0% | |
| AAGTGTCTGTATATATCGAT+CGG | - | chr6_1:86723695-86723714 | None:intergenic | 30.0% | |
| GATCAAGAAGAAGTTATTAG+TGG | + | chr6_1:86723778-86723797 | Msa0896540:CDS | 30.0% | |
| ! | GGTTTGAGTTATAGAGTTAA+TGG | + | chr6_1:86724057-86724076 | Msa0896540:CDS | 30.0% |
| GAGTTATAGAGTTAATGGTT+TGG | + | chr6_1:86724062-86724081 | Msa0896540:CDS | 30.0% | |
| TTTGGAAGTTCATGTTCAAA+TGG | + | chr6_1:86724341-86724360 | Msa0896540:CDS | 30.0% | |
| AAGAAGAAGGAAATTCTTCT+AGG | + | chr6_1:86724388-86724407 | Msa0896540:CDS | 30.0% | |
| ! | AAGAATTTTGCTGGGAAAAA+AGG | + | chr6_1:86724411-86724430 | Msa0896540:CDS | 30.0% |
| TGTTATGCATCATCAAACAA+TGG | + | chr6_1:86724868-86724887 | Msa0896540:three_prime_UTR | 30.0% | |
| ! | CTACTCTTTCTCCAATTTTT+AGG | + | chr6_1:86724923-86724942 | Msa0896540:three_prime_UTR | 30.0% |
| ATAGATGCACACCTAAAAAT+TGG | - | chr6_1:86724937-86724956 | None:intergenic | 30.0% | |
| AAACATAACTACACAGAACT+TGG | - | chr6_1:86724963-86724982 | None:intergenic | 30.0% | |
| TTATAGGCAAGGGATATTGA+TGG | + | chr6_1:86720135-86720154 | Msa0896540:exon | 35.0% | |
| AGAGATTCTGACCTTACAAA+GGG | - | chr6_1:86720574-86720593 | None:intergenic | 35.0% | |
| TCAGAATCTCTCCTAAAAGA+TGG | + | chr6_1:86720583-86720602 | Msa0896540:intron | 35.0% | |
| AATCTCTCCTAAAAGATGGT+AGG | + | chr6_1:86720587-86720606 | Msa0896540:intron | 35.0% | |
| ACCAAATGTAATGACGGTAA+TGG | + | chr6_1:86720740-86720759 | Msa0896540:intron | 35.0% | |
| TTGTCCAGGACAACAAAAAA+CGG | - | chr6_1:86720792-86720811 | None:intergenic | 35.0% | |
| TTCGTTACAGCCAAATGAAA+TGG | - | chr6_1:86720867-86720886 | None:intergenic | 35.0% | |
| CAATTCACACATCAATTGGA+GGG | - | chr6_1:86721048-86721067 | None:intergenic | 35.0% | |
| ATCCGAGATCAAATATTGGT+TGG | - | chr6_1:86721103-86721122 | None:intergenic | 35.0% | |
| ATCAATCATCAATGGGAAGA+AGG | + | chr6_1:86721500-86721519 | Msa0896540:intron | 35.0% | |
| TCAATCATCAATGGGAAGAA+GGG | + | chr6_1:86721501-86721520 | Msa0896540:intron | 35.0% | |
| ! | AAGTGTTGCTAATAGATTGG+TGG | + | chr6_1:86721982-86722001 | Msa0896540:intron | 35.0% |
| ATTGTAGGACAACAAAGGTA+AGG | - | chr6_1:86722243-86722262 | None:intergenic | 35.0% | |
| AACAGATTGACACCATCATA+GGG | - | chr6_1:86722509-86722528 | None:intergenic | 35.0% | |
| AAACAGATTGACACCATCAT+AGG | - | chr6_1:86722510-86722529 | None:intergenic | 35.0% | |
| GTTGAAATCAGATTGGAGAT+TGG | - | chr6_1:86722541-86722560 | None:intergenic | 35.0% | |
| ! | TGACAATGGATTTGGAATCT+TGG | - | chr6_1:86722563-86722582 | None:intergenic | 35.0% |
| ! | CAGAACAATGACAATGGATT+TGG | - | chr6_1:86722571-86722590 | None:intergenic | 35.0% |
| CAAATCCATTGTCATTGTTC+TGG | + | chr6_1:86722569-86722588 | Msa0896540:intron | 35.0% | |
| GGTATGTAAAGTTATGGCAA+AGG | - | chr6_1:86722649-86722668 | None:intergenic | 35.0% | |
| TAACGGTTACATACACAACA+TGG | - | chr6_1:86722776-86722795 | None:intergenic | 35.0% | |
| CACAAGACATGAGGATAAAA+TGG | - | chr6_1:86722813-86722832 | None:intergenic | 35.0% | |
| TATAAAGTGCACAAGACATG+AGG | - | chr6_1:86722822-86722841 | None:intergenic | 35.0% | |
| TCATCAACCTTATTGAGATC+TGG | + | chr6_1:86723177-86723196 | Msa0896540:intron | 35.0% | |
| GCTATGAACTTGAGTAAATC+AGG | + | chr6_1:86723276-86723295 | Msa0896540:intron | 35.0% | |
| CATGGTTAATTCAGTTCCAT+AGG | - | chr6_1:86723381-86723400 | None:intergenic | 35.0% | |
| GGAAGAAAGGATGAAAATGT+TGG | + | chr6_1:86723543-86723562 | Msa0896540:CDS | 35.0% | |
| AGGATGAAAATGTTGGCAAT+TGG | + | chr6_1:86723550-86723569 | Msa0896540:CDS | 35.0% | |
| ! | AAAGTAGTTGAGGTCTCTTT+TGG | - | chr6_1:86723633-86723652 | None:intergenic | 35.0% |
| ! | CTTCTGCATGATTTGTACAA+TGG | + | chr6_1:86723655-86723674 | Msa0896540:CDS | 35.0% |
| CTCTTCACAAGTTTCAACTT+TGG | + | chr6_1:86723741-86723760 | Msa0896540:CDS | 35.0% | |
| ! | CAAGTTTCAACTTTGGAAGA+AGG | + | chr6_1:86723748-86723767 | Msa0896540:CDS | 35.0% |
| ACAAATGTTGCCATTGATGA+AGG | + | chr6_1:86723846-86723865 | Msa0896540:CDS | 35.0% | |
| CAAATGTTGCCATTGATGAA+GGG | + | chr6_1:86723847-86723866 | Msa0896540:CDS | 35.0% | |
| AATTGCATCAACATCAACCA+TGG | - | chr6_1:86723875-86723894 | None:intergenic | 35.0% | |
| !!! | GTGTGATTTTTTGGTTCATG+AGG | + | chr6_1:86723924-86723943 | Msa0896540:CDS | 35.0% |
| !!! | GATTTTTTGGTTCATGAGGT+TGG | + | chr6_1:86723928-86723947 | Msa0896540:CDS | 35.0% |
| !! | GTTTTGTTGAATGAGAATGC+TGG | + | chr6_1:86724036-86724055 | Msa0896540:CDS | 35.0% |
| ! | GTTTTCATCAAGAGAAAAGC+CGG | + | chr6_1:86724117-86724136 | Msa0896540:CDS | 35.0% |
| AGGAAGATTGAAGATCTTCA+AGG | + | chr6_1:86724198-86724217 | Msa0896540:CDS | 35.0% | |
| AGAAGAGAGAGTCAAGAAAA+TGG | + | chr6_1:86724273-86724292 | Msa0896540:CDS | 35.0% | |
| TCTTTCCACTTAAACCTTCT+AGG | - | chr6_1:86724372-86724391 | None:intergenic | 35.0% | |
| AGGTTTAAGTGGAAAGAAGA+AGG | + | chr6_1:86724375-86724394 | Msa0896540:CDS | 35.0% | |
| !! | TCTTCTAGGAAGAATTTTGC+TGG | + | chr6_1:86724402-86724421 | Msa0896540:CDS | 35.0% |
| !! | CTTCTAGGAAGAATTTTGCT+GGG | + | chr6_1:86724403-86724422 | Msa0896540:CDS | 35.0% |
| GGAAAAAAGGTCATAGTTTG+TGG | + | chr6_1:86724424-86724443 | Msa0896540:CDS | 35.0% | |
| GTGGAAAAAGTTGAAGAACA+TGG | + | chr6_1:86724443-86724462 | Msa0896540:CDS | 35.0% | |
| TAGGTTACTAAGCATGTGTT+TGG | + | chr6_1:86724622-86724641 | Msa0896540:three_prime_UTR | 35.0% | |
| AGCTATAATACTAGAGGCAA+AGG | - | chr6_1:86724818-86724837 | None:intergenic | 35.0% | |
| TTTGCCTCTAGTATTATAGC+TGG | + | chr6_1:86724817-86724836 | Msa0896540:three_prime_UTR | 35.0% | |
| CAAGGGATATTGATGGAGAA+GGG | + | chr6_1:86720142-86720161 | Msa0896540:exon | 40.0% | |
| GAGAGATTCTGACCTTACAA+AGG | - | chr6_1:86720575-86720594 | None:intergenic | 40.0% | |
| GCCATTACCGTCATTACATT+TGG | - | chr6_1:86720744-86720763 | None:intergenic | 40.0% | |
| GTTACAGCCAAATGAAATGG+CGG | - | chr6_1:86720864-86720883 | None:intergenic | 40.0% | |
| CCAATTCACACATCAATTGG+AGG | - | chr6_1:86721049-86721068 | None:intergenic | 40.0% | |
| CCTCCAATTGATGTGTGAAT+TGG | + | chr6_1:86721046-86721065 | Msa0896540:intron | 40.0% | |
| GGACCAATTCACACATCAAT+TGG | - | chr6_1:86721052-86721071 | None:intergenic | 40.0% | |
| ATTGATGTGTGAATTGGTCC+TGG | + | chr6_1:86721052-86721071 | Msa0896540:intron | 40.0% | |
| ACAAACGTCCAAGTCTACTT+TGG | + | chr6_1:86721595-86721614 | Msa0896540:intron | 40.0% | |
| !! | TGCTGTTTCCAAAGTAGACT+TGG | - | chr6_1:86721606-86721625 | None:intergenic | 40.0% |
| CAATGTGTCTTCGACTCATA+TGG | - | chr6_1:86721923-86721942 | None:intergenic | 40.0% | |
| TTTCATAGGCTGCTATTGAC+AGG | + | chr6_1:86722476-86722495 | Msa0896540:intron | 40.0% | |
| ACAGATTGACACCATCATAG+GGG | - | chr6_1:86722508-86722527 | None:intergenic | 40.0% | |
| ATGAGCCAGAACAATGACAA+TGG | - | chr6_1:86722577-86722596 | None:intergenic | 40.0% | |
| CCAATGAGAACACCAAAAGA+AGG | - | chr6_1:86723213-86723232 | None:intergenic | 40.0% | |
| !!! | CCTTCTTTTGGTGTTCTCAT+TGG | + | chr6_1:86723210-86723229 | Msa0896540:intron | 40.0% |
| TGGTGGTAGATTTGGAAGAA+AGG | + | chr6_1:86723530-86723549 | Msa0896540:intron | 40.0% | |
| TGCAGAAGAGAAAGTAGTTG+AGG | - | chr6_1:86723643-86723662 | None:intergenic | 40.0% | |
| !! | TGGTGTGAGTCAAGTTGATT+CGG | + | chr6_1:86723798-86723817 | Msa0896540:CDS | 40.0% |
| ! | GTTACAGAAGAGTTTGCTTG+AGG | + | chr6_1:86723993-86724012 | Msa0896540:CDS | 40.0% |
| TCTCTTGATGAAAACCGACT+CGG | - | chr6_1:86724112-86724131 | None:intergenic | 40.0% | |
| TAAGTGTGTGCTGAAGATGA+GGG | + | chr6_1:86724149-86724168 | Msa0896540:CDS | 40.0% | |
| GATCTTCAAGGACAGATACA+TGG | + | chr6_1:86724210-86724229 | Msa0896540:CDS | 40.0% | |
| TCAAGGACAGATACATGGTT+TGG | + | chr6_1:86724215-86724234 | Msa0896540:CDS | 40.0% | |
| ! | AGATACATGGTTTGGAGAAG+AGG | + | chr6_1:86724223-86724242 | Msa0896540:CDS | 40.0% |
| !! | GGAACAAGGAGTATTATGAG+AGG | + | chr6_1:86724244-86724263 | Msa0896540:CDS | 40.0% |
| AGAGAGAGTCAAGAAAATGG+CGG | + | chr6_1:86724276-86724295 | Msa0896540:CDS | 40.0% | |
| CAAGAAAATGGCGGTTGTAT+CGG | + | chr6_1:86724285-86724304 | Msa0896540:CDS | 40.0% | |
| TTCAAATGGAGAAGCCTAGA+AGG | + | chr6_1:86724355-86724374 | Msa0896540:CDS | 40.0% | |
| AGAAGCCTAGAAGGTTTAAG+TGG | + | chr6_1:86724364-86724383 | Msa0896540:CDS | 40.0% | |
| !! | AACATGGACTTGTTGCTATG+TGG | + | chr6_1:86724459-86724478 | Msa0896540:CDS | 40.0% |
| !! | ACATGGACTTGTTGCTATGT+GGG | + | chr6_1:86724460-86724479 | Msa0896540:CDS | 40.0% |
| ! | GAAATCGCAGCAAAAGCATA+TGG | - | chr6_1:86724681-86724700 | None:intergenic | 40.0% |
| ACCACCAGCTATAATACTAG+AGG | - | chr6_1:86724824-86724843 | None:intergenic | 40.0% | |
| GCAAGGGATATTGATGGAGA+AGG | + | chr6_1:86720141-86720160 | Msa0896540:exon | 45.0% | |
| GAAGGGACCCAACATTATTG+TGG | + | chr6_1:86720159-86720178 | Msa0896540:CDS | 45.0% | |
| TTGGTTGTAATGAGCACCAC+AGG | - | chr6_1:86720725-86720744 | None:intergenic | 45.0% | |
| GCCATTACCGCCATTTCATT+TGG | + | chr6_1:86720854-86720873 | Msa0896540:intron | 45.0% | |
| GCCAAATGAAATGGCGGTAA+TGG | - | chr6_1:86720858-86720877 | None:intergenic | 45.0% | |
| GTGAATTGGTCCTGGCAATT+CGG | + | chr6_1:86721060-86721079 | Msa0896540:intron | 45.0% | |
| ATCAATGGGAAGAAGGGATG+AGG | + | chr6_1:86721507-86721526 | Msa0896540:intron | 45.0% | |
| ACAGGTATCTACCCCTATGA+TGG | + | chr6_1:86722494-86722513 | Msa0896540:intron | 45.0% | |
| ACCATGGAACCCTTCATCAA+TGG | - | chr6_1:86723859-86723878 | None:intergenic | 45.0% | |
| !! | GAAAGTATTGCGAGTCTTCG+AGG | + | chr6_1:86723962-86723981 | Msa0896540:CDS | 45.0% |
| CACACACTTAGCTAACTCAC+CGG | - | chr6_1:86724139-86724158 | None:intergenic | 45.0% | |
| CTAAGTGTGTGCTGAAGATG+AGG | + | chr6_1:86724148-86724167 | Msa0896540:CDS | 45.0% | |
| ! | TGGTTTGGAGAAGAGGAACA+AGG | + | chr6_1:86724230-86724249 | Msa0896540:CDS | 45.0% |
| ATCGGCAACAAAGGGAAGAA+TGG | + | chr6_1:86724303-86724322 | Msa0896540:CDS | 45.0% | |
| GATCAAGATCAAGCGCAAGT+TGG | - | chr6_1:86724492-86724511 | None:intergenic | 45.0% | |
| TGCGCTTGATCTTGATCAGA+CGG | + | chr6_1:86724495-86724514 | Msa0896540:exon | 45.0% | |
| TTGATCAGACGGTTCAGATG+TGG | + | chr6_1:86724506-86724525 | Msa0896540:three_prime_UTR | 45.0% | |
| ACCACGTGATTGTACGTAGT+CGG | - | chr6_1:86724532-86724551 | None:intergenic | 45.0% | |
| ! | TCGCAGCAAAAGCATATGGT+TGG | - | chr6_1:86724677-86724696 | None:intergenic | 45.0% |
| GCCTCTAGTATTATAGCTGG+TGG | + | chr6_1:86724820-86724839 | Msa0896540:three_prime_UTR | 45.0% | |
| AGAAATGCTGGTGAGAAGCC+AGG | - | chr6_1:86720281-86720300 | None:intergenic | 50.0% | |
| TGGCTTCTCACCAGCATTTC+TGG | + | chr6_1:86720280-86720299 | Msa0896540:CDS | 50.0% | |
| CAGAACGCGACACATGTTCT+GGG | + | chr6_1:86720763-86720782 | Msa0896540:intron | 50.0% | |
| !!! | GCAGCCGTTTTTTGTTGTCC+TGG | + | chr6_1:86720785-86720804 | Msa0896540:intron | 50.0% |
| AATTGGTCCTGGCAATTCGG+AGG | + | chr6_1:86721063-86721082 | Msa0896540:intron | 50.0% | |
| ATGGGAAGAAGGGATGAGGA+AGG | + | chr6_1:86721511-86721530 | Msa0896540:intron | 50.0% | |
| GAAGAAGGGATGAGGAAGGA+AGG | + | chr6_1:86721515-86721534 | Msa0896540:intron | 50.0% | |
| ! | AAGAGAAGCGCGTGACAACA+TGG | - | chr6_1:86721678-86721697 | None:intergenic | 50.0% |
| GCACTTAGCACATGCATCTC+AGG | + | chr6_1:86722885-86722904 | Msa0896540:intron | 50.0% | |
| GCCATTGATGAAGGGTTCCA+TGG | + | chr6_1:86723855-86723874 | Msa0896540:CDS | 50.0% | |
| !! | GGTTCATGAGGTTGGTGTCA+TGG | + | chr6_1:86723936-86723955 | Msa0896540:CDS | 50.0% |
| ! | GAAGAGTTTGCTTGAGGTGC+TGG | + | chr6_1:86723999-86724018 | Msa0896540:CDS | 50.0% |
| ! | GCGGTTGTATCGGCAACAAA+GGG | + | chr6_1:86724295-86724314 | Msa0896540:CDS | 50.0% |
| GGCAACAAAGGGAAGAATGG+CGG | + | chr6_1:86724306-86724325 | Msa0896540:CDS | 50.0% | |
| AAAGGGAAGAATGGCGGTGA+AGG | + | chr6_1:86724312-86724331 | Msa0896540:CDS | 50.0% | |
| TGGCGGTGAAGGAATAGCTT+TGG | + | chr6_1:86724323-86724342 | Msa0896540:CDS | 50.0% | |
| ! | AAGCCAGGAGGGCATGTTGT+TGG | - | chr6_1:86720266-86720285 | None:intergenic | 55.0% |
| ATGCTGGTGAGAAGCCAGGA+GGG | - | chr6_1:86720277-86720296 | None:intergenic | 55.0% | |
| AATGCTGGTGAGAAGCCAGG+AGG | - | chr6_1:86720278-86720297 | None:intergenic | 55.0% | |
| GCAGAACGCGACACATGTTC+TGG | + | chr6_1:86720762-86720781 | Msa0896540:intron | 55.0% | |
| GCAGAACGCGACAAGTGTCA+TGG | - | chr6_1:86720836-86720855 | None:intergenic | 55.0% | |
| CAAAGAGCTTGCGTCCGAGT+CGG | + | chr6_1:86724095-86724114 | Msa0896540:CDS | 55.0% | |
| GTGTGTGCTGAAGATGAGGG+AGG | + | chr6_1:86724152-86724171 | Msa0896540:CDS | 55.0% | |
| ! | GGCGGTTGTATCGGCAACAA+AGG | + | chr6_1:86724294-86724313 | Msa0896540:CDS | 55.0% |
| GCCGACTACGTACAATCACG+TGG | + | chr6_1:86724528-86724547 | Msa0896540:three_prime_UTR | 55.0% | |
| ! | CCAGGAGGGCATGTTGTTGG+TGG | - | chr6_1:86720263-86720282 | None:intergenic | 60.0% |
| CCACCAACAACATGCCCTCC+TGG | + | chr6_1:86720260-86720279 | Msa0896540:CDS | 60.0% | |
| GTCCTGGCAATTCGGAGGTC+AGG | + | chr6_1:86721068-86721087 | Msa0896540:intron | 60.0% | |
| TGCCTGACCTCCGAATTGCC+AGG | - | chr6_1:86721073-86721092 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 86720129 | 86725020 | 86720129 | ID=Msa0896540;Name=Msa0896540 |
| chr6_1 | mRNA | 86720129 | 86725020 | 86720129 | ID=Msa0896540-mRNA-1;Parent=Msa0896540;Name=Msa0896540-mRNA-1;_AED=0.08;_eAED=0.08;_QI=25|1|0.5|1|1|1|2|517|370 |
| chr6_1 | exon | 86720129 | 86720301 | 86720129 | ID=Msa0896540-mRNA-1:exon:14685;Parent=Msa0896540-mRNA-1 |
| chr6_1 | exon | 86723539 | 86725020 | 86723539 | ID=Msa0896540-mRNA-1:exon:14686;Parent=Msa0896540-mRNA-1 |
| chr6_1 | five_prime_UTR | 86720129 | 86720153 | 86720129 | ID=Msa0896540-mRNA-1:five_prime_utr;Parent=Msa0896540-mRNA-1 |
| chr6_1 | CDS | 86720154 | 86720301 | 86720154 | ID=Msa0896540-mRNA-1:cds;Parent=Msa0896540-mRNA-1 |
| chr6_1 | CDS | 86723539 | 86724503 | 86723539 | ID=Msa0896540-mRNA-1:cds;Parent=Msa0896540-mRNA-1 |
| chr6_1 | three_prime_UTR | 86724504 | 86725020 | 86724504 | ID=Msa0896540-mRNA-1:three_prime_utr;Parent=Msa0896540-mRNA-1 |
| Gene Sequence |
| Protein sequence |
