Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1232790 | XP_013442054.1 | 26.490 | 302 | 168 | 10 | 3 | 279 | 4 | 276 | 1.63e-19 | 97.1 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1232790 | sp|Q6XPT5|MCA7_ARATH | 28.313 | 166 | 108 | 5 | 1 | 163 | 1 | 158 | 5.38e-15 | 77.8 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1232790 | A0A072TET9 | 26.490 | 302 | 168 | 10 | 3 | 279 | 4 | 276 | 7.77e-20 | 97.1 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1232620 | Msa1232790 | 0.968982 | 1.856289e-129 | -8.615850e-47 |
| Msa1232790 | Msa1313340 | 0.973433 | 2.023247e-136 | -8.615850e-47 |
| Msa1232790 | Msa1313410 | 0.982695 | 9.304086e-156 | -8.615850e-47 |
| Msa1178420 | Msa1232790 | 0.970713 | 4.885090e-132 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1232790 | MtrunA17_Chr8g0356911 | 26.490 | 302 | 168 | 10 | 3 | 279 | 4 | 276 | 1.50e-23 | 97.1 |
| Msa1232790 | MtrunA17_Chr2g0309701 | 27.660 | 235 | 146 | 8 | 1 | 223 | 4 | 226 | 1.14e-17 | 82.4 |
| Msa1232790 | MtrunA17_Chr1g0175941 | 24.296 | 284 | 167 | 7 | 17 | 279 | 32 | 288 | 2.89e-17 | 81.6 |
| Msa1232790 | MtrunA17_Chr8g0356311 | 28.659 | 164 | 106 | 4 | 1 | 161 | 1 | 156 | 7.51e-15 | 73.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1232790 | AT1G79310.1 | 28.313 | 166 | 108 | 5 | 1 | 163 | 1 | 158 | 5.47e-16 | 77.8 |
| Msa1232790 | AT1G79340.1 | 29.268 | 164 | 105 | 4 | 1 | 161 | 1 | 156 | 3.08e-15 | 75.5 |
| Msa1232790 | AT1G79330.1 | 28.049 | 164 | 107 | 4 | 1 | 161 | 1 | 156 | 1.81e-14 | 73.2 |
| Msa1232790 | AT1G79320.1 | 28.659 | 164 | 106 | 4 | 1 | 161 | 1 | 156 | 1.41e-13 | 70.5 |
Find 71 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGATGAAAGATTCGATATA+GGG | 0.266282 | 8_2:-9387794 | Msa1232790:CDS |
| GCGAAGGATTGCTAGGCTTT+TGG | 0.269483 | 8_2:-9386617 | Msa1232790:CDS |
| GGTGAGAGGTTCAATGGATT+TGG | 0.295447 | 8_2:-9386787 | Msa1232790:CDS |
| TGCACTTTCTCTTCTTCCCT+TGG | 0.325486 | 8_2:+9386662 | None:intergenic |
| CTCTCCTCAAGGCTGTTAAA+AGG | 0.327370 | 8_2:-9386705 | Msa1232790:CDS |
| GAGGATGAAAGATTCGATAT+AGG | 0.329537 | 8_2:-9387795 | Msa1232790:CDS |
| TCGAATCTTTCATCCTCCTT+AGG | 0.336446 | 8_2:+9387801 | None:intergenic |
| CAAGCAAGGCTGGACTTTCT+AGG | 0.356897 | 8_2:-9386535 | Msa1232790:CDS |
| ACCGATGATTCTCGTATCTA+TGG | 0.370000 | 8_2:-9387106 | Msa1232790:intron |
| AGAACTAAAGCTAAAAGATA+TGG | 0.401543 | 8_2:-9387754 | Msa1232790:CDS |
| CTTTCTCTTCTTCCCTTGGT+GGG | 0.408662 | 8_2:+9386666 | None:intergenic |
| CGAATCTTTCATCCTCCTTA+GGG | 0.417346 | 8_2:+9387802 | None:intergenic |
| AGAAGATTGTTTGTTGCAGC+AGG | 0.433609 | 8_2:+9386813 | None:intergenic |
| TGAAGCACTTACTATGCAAT+TGG | 0.434616 | 8_2:+9386511 | None:intergenic |
| GGCGCCGCTAAGGAACAAAT+TGG | 0.441061 | 8_2:-9386898 | Msa1232790:CDS |
| AGTTGCATGTATATCAAATC+CGG | 0.442599 | 8_2:-9387940 | Msa1232790:CDS |
| ACTTTCTCTTCTTCCCTTGG+TGG | 0.444200 | 8_2:+9386665 | None:intergenic |
| GGAGCTCCTGATGCACGTCC+AGG | 0.447425 | 8_2:-9387918 | Msa1232790:CDS |
| TCTATAGGTGAGAGGTTCAA+TGG | 0.447603 | 8_2:-9386793 | Msa1232790:CDS |
| AAAGCGTGGCACCTTGTTTG+TGG | 0.447697 | 8_2:-9386731 | Msa1232790:CDS |
| TGCAACAAACAATCTTCTAT+AGG | 0.464135 | 8_2:-9386808 | Msa1232790:CDS |
| CTAGAAAGTCCAGCCTTGCT+TGG | 0.464626 | 8_2:+9386536 | None:intergenic |
| AGATGGGGAAACCCAACAAC+CGG | 0.467871 | 8_2:-9386578 | Msa1232790:CDS |
| ACCATCCCCGGGTACAGATT+CGG | 0.474186 | 8_2:+9387728 | None:intergenic |
| ATACAACCTGGACGTGCATC+AGG | 0.474598 | 8_2:+9387912 | None:intergenic |
| AAACAATACCACACCATCCC+CGG | 0.480304 | 8_2:+9387716 | None:intergenic |
| AGATTAAGCTGATATGTTTG+CGG | 0.481248 | 8_2:+9387838 | None:intergenic |
| ACGATATGACTTGTAGAGTT+GGG | 0.481724 | 8_2:+9386874 | None:intergenic |
| GACGCTATCATTACTGCATT+AGG | 0.482601 | 8_2:+9386835 | None:intergenic |
| CCTTAGCGGCGCCTTCGAAA+AGG | 0.483351 | 8_2:+9386908 | None:intergenic |
| GCATGGAGGAACTGTGGAGG+AGG | 0.484418 | 8_2:-9387170 | Msa1232790:CDS |
| CCTCTCTTGTACGGTGATTG+TGG | 0.490171 | 8_2:-9386950 | Msa1232790:CDS |
| TAGCGACACCCAAGCAAGGC+TGG | 0.490789 | 8_2:-9386545 | Msa1232790:CDS |
| TAGAAAGTCCAGCCTTGCTT+GGG | 0.500080 | 8_2:+9386537 | None:intergenic |
| GGGACCAATTTGTTCCTTAG+CGG | 0.507529 | 8_2:+9386894 | None:intergenic |
| ATGGTCTCCGAATCTGTACC+CGG | 0.509670 | 8_2:-9387735 | Msa1232790:CDS |
| GACGATATGACTTGTAGAGT+TGG | 0.510842 | 8_2:+9386873 | None:intergenic |
| GAATTCAAGTGATTACTACT+TGG | 0.517361 | 8_2:-9387134 | Msa1232790:CDS |
| GGATGAAAGATTCGATATAG+GGG | 0.520357 | 8_2:-9387793 | Msa1232790:CDS |
| TCCGAATCTGTACCCGGGGA+TGG | 0.522031 | 8_2:-9387729 | Msa1232790:CDS |
| ATCTGTACCCGGGGATGGTG+TGG | 0.522914 | 8_2:-9387724 | Msa1232790:CDS |
| ACCGTACAAGAGAGGTTAGC+AGG | 0.524948 | 8_2:+9386958 | None:intergenic |
| GTTTGTGGAATCTCTCCTCA+AGG | 0.525811 | 8_2:-9386716 | Msa1232790:CDS |
| GGACGTGCATCAGGAGCTCC+CGG | 0.526298 | 8_2:+9387921 | None:intergenic |
| GGTTGGTGCGAAGGATTGCT+AGG | 0.526445 | 8_2:-9386624 | Msa1232790:CDS |
| CTTAGATATAAAACACCCTA+AGG | 0.531876 | 8_2:-9387817 | Msa1232790:CDS |
| AGTGCAGAGTCACCAACAAA+AGG | 0.536032 | 8_2:-9386645 | Msa1232790:CDS |
| AACAATACCACACCATCCCC+GGG | 0.553758 | 8_2:+9387717 | None:intergenic |
| AGCGGCGCCTTCGAAAAGGC+CGG | 0.554536 | 8_2:+9386912 | None:intergenic |
| GTGGACGCTTGTTTCAGCGC+CGG | 0.555105 | 8_2:-9386931 | Msa1232790:CDS |
| TTTATGAACCTCGGGAACAA+TGG | 0.557196 | 8_2:+9386757 | None:intergenic |
| CCAACAAAAGGTTGGTGCGA+AGG | 0.564541 | 8_2:-9386633 | Msa1232790:CDS |
| TCCTGCTAACCTCTCTTGTA+CGG | 0.566296 | 8_2:-9386959 | Msa1232790:CDS |
| ACCATAGATACGAGAATCAT+CGG | 0.570225 | 8_2:+9387105 | None:intergenic |
| TAAGCAGACGTGATACAACC+TGG | 0.577441 | 8_2:+9387900 | None:intergenic |
| AGCGTAGAGTCACCCACCAA+GGG | 0.591381 | 8_2:-9386678 | Msa1232790:CDS |
| CAGAGTCACCAACAAAAGGT+TGG | 0.603892 | 8_2:-9386641 | Msa1232790:CDS |
| GTTGCATGTATATCAAATCC+GGG | 0.606506 | 8_2:-9387939 | Msa1232790:CDS |
| GATATCATCCATTGTTCCCG+AGG | 0.609122 | 8_2:-9386765 | Msa1232790:CDS |
| GATGAAAGATTCGATATAGG+GGG | 0.619536 | 8_2:-9387792 | Msa1232790:CDS |
| TTTGTAGCGACACCCAAGCA+AGG | 0.619617 | 8_2:-9386549 | Msa1232790:CDS |
| TGGTCTCCGAATCTGTACCC+GGG | 0.625032 | 8_2:-9387734 | Msa1232790:CDS |
| AAGCGTAGAGTCACCCACCA+AGG | 0.632729 | 8_2:-9386679 | Msa1232790:CDS |
| AACAATCTTCTATAGGTGAG+AGG | 0.633433 | 8_2:-9386801 | Msa1232790:CDS |
| AGATATAAAACACCCTAAGG+AGG | 0.640748 | 8_2:-9387814 | Msa1232790:CDS |
| TACAGGGCATGGAGGAACTG+TGG | 0.641620 | 8_2:-9387176 | Msa1232790:intron |
| GAGGAGAGATTCCACAAACA+AGG | 0.648421 | 8_2:+9386720 | None:intergenic |
| AGGGCATGGAGGAACTGTGG+AGG | 0.649291 | 8_2:-9387173 | Msa1232790:CDS |
| CCACAATCACCGTACAAGAG+AGG | 0.649619 | 8_2:+9386950 | None:intergenic |
| GGTCTCCGAATCTGTACCCG+GGG | 0.650650 | 8_2:-9387733 | Msa1232790:CDS |
| AATTTGTATACAGGGCATGG+AGG | 0.718727 | 8_2:-9387184 | Msa1232790:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTCTTTTTTCGAAATTTTT+AGG | - | chr8_2:9386924-9386943 | Msa1232790:CDS | 15.0% |
| !!! | CATTTTTTAGGATAAATTTT+AGG | - | chr8_2:9387122-9387141 | Msa1232790:CDS | 15.0% |
| !! | AAAAAATATTGGAAAAAGAT+GGG | - | chr8_2:9387885-9387904 | Msa1232790:CDS | 15.0% |
| !!! | ATTCTTTTTTCGAAATTTTT+AGG | - | chr8_2:9386924-9386943 | Msa1232790:CDS | 15.0% |
| !!! | CATTTTTTAGGATAAATTTT+AGG | - | chr8_2:9387122-9387141 | Msa1232790:CDS | 15.0% |
| !! | AAAAAATATTGGAAAAAGAT+GGG | - | chr8_2:9387885-9387904 | Msa1232790:CDS | 15.0% |
| !!! | AAACTTTTGATCAAAAGATA+TGG | - | chr8_2:9386612-9386631 | Msa1232790:CDS | 20.0% |
| !!! | AACTTTTGATCAAAAGATAT+GGG | - | chr8_2:9386613-9386632 | Msa1232790:CDS | 20.0% |
| !!! | TTTTAGGATAAATTTTAGGA+AGG | - | chr8_2:9387126-9387145 | Msa1232790:CDS | 20.0% |
| !!! | TTTAGGATAAATTTTAGGAA+GGG | - | chr8_2:9387127-9387146 | Msa1232790:CDS | 20.0% |
| !! | AGATTTATGAATTTGTATAC+AGG | - | chr8_2:9387286-9387305 | Msa1232790:intron | 20.0% |
| !! | GATTTATGAATTTGTATACA+GGG | - | chr8_2:9387287-9387306 | Msa1232790:intron | 20.0% |
| !!! | TTGTTCTTATCATTTTTTGA+AGG | + | chr8_2:9387499-9387518 | None:intergenic | 20.0% |
| !! | GAAAAAATATTGGAAAAAGA+TGG | - | chr8_2:9387884-9387903 | Msa1232790:CDS | 20.0% |
| !! | AAAAATATTGGAAAAAGATG+GGG | - | chr8_2:9387886-9387905 | Msa1232790:CDS | 20.0% |
| !!! | AAACTTTTGATCAAAAGATA+TGG | - | chr8_2:9386612-9386631 | Msa1232790:CDS | 20.0% |
| !!! | AACTTTTGATCAAAAGATAT+GGG | - | chr8_2:9386613-9386632 | Msa1232790:CDS | 20.0% |
| !!! | TTTTAGGATAAATTTTAGGA+AGG | - | chr8_2:9387126-9387145 | Msa1232790:CDS | 20.0% |
| !!! | TTTAGGATAAATTTTAGGAA+GGG | - | chr8_2:9387127-9387146 | Msa1232790:CDS | 20.0% |
| !! | AGATTTATGAATTTGTATAC+AGG | - | chr8_2:9387286-9387305 | Msa1232790:intron | 20.0% |
| !! | GATTTATGAATTTGTATACA+GGG | - | chr8_2:9387287-9387306 | Msa1232790:intron | 20.0% |
| !!! | TTGTTCTTATCATTTTTTGA+AGG | + | chr8_2:9387499-9387518 | None:intergenic | 20.0% |
| !! | GAAAAAATATTGGAAAAAGA+TGG | - | chr8_2:9387884-9387903 | Msa1232790:CDS | 20.0% |
| !! | AAAAATATTGGAAAAAGATG+GGG | - | chr8_2:9387886-9387905 | Msa1232790:CDS | 20.0% |
| ! | AGAACTAAAGCTAAAAGATA+TGG | - | chr8_2:9386725-9386744 | Msa1232790:CDS | 25.0% |
| !!! | TCGATTAAGCTTTAAAGAAA+CGG | + | chr8_2:9386884-9386903 | None:intergenic | 25.0% |
| ! | CGAAAAAAGAATTAAGCTAA+GGG | + | chr8_2:9386916-9386935 | None:intergenic | 25.0% |
| ! | TCGAAAAAAGAATTAAGCTA+AGG | + | chr8_2:9386917-9386936 | None:intergenic | 25.0% |
| !!! | TTTTTCGAAATTTTTAGGCA+AGG | - | chr8_2:9386929-9386948 | Msa1232790:CDS | 25.0% |
| !!! | TTTTCGAAATTTTTAGGCAA+GGG | - | chr8_2:9386930-9386949 | Msa1232790:CDS | 25.0% |
| !! | TTGTTTCACATAGTTTCTTT+TGG | - | chr8_2:9387091-9387110 | Msa1232790:intron | 25.0% |
| !! | TGTTTCACATAGTTTCTTTT+GGG | - | chr8_2:9387092-9387111 | Msa1232790:intron | 25.0% |
| !!! | TGATGAATTCTGGAAATTTT+TGG | - | chr8_2:9387185-9387204 | Msa1232790:intron | 25.0% |
| !!! | GATGAATTCTGGAAATTTTT+GGG | - | chr8_2:9387186-9387205 | Msa1232790:intron | 25.0% |
| !!! | TAGGCTTTTGGAAAAAATAT+TGG | - | chr8_2:9387874-9387893 | Msa1232790:CDS | 25.0% |
| ! | AGAACTAAAGCTAAAAGATA+TGG | - | chr8_2:9386725-9386744 | Msa1232790:CDS | 25.0% |
| !!! | TCGATTAAGCTTTAAAGAAA+CGG | + | chr8_2:9386884-9386903 | None:intergenic | 25.0% |
| ! | CGAAAAAAGAATTAAGCTAA+GGG | + | chr8_2:9386916-9386935 | None:intergenic | 25.0% |
| ! | TCGAAAAAAGAATTAAGCTA+AGG | + | chr8_2:9386917-9386936 | None:intergenic | 25.0% |
| !!! | TTTTTCGAAATTTTTAGGCA+AGG | - | chr8_2:9386929-9386948 | Msa1232790:CDS | 25.0% |
| !!! | TTTTCGAAATTTTTAGGCAA+GGG | - | chr8_2:9386930-9386949 | Msa1232790:CDS | 25.0% |
| !! | TTGTTTCACATAGTTTCTTT+TGG | - | chr8_2:9387091-9387110 | Msa1232790:intron | 25.0% |
| !! | TGTTTCACATAGTTTCTTTT+GGG | - | chr8_2:9387092-9387111 | Msa1232790:intron | 25.0% |
| !!! | TGATGAATTCTGGAAATTTT+TGG | - | chr8_2:9387185-9387204 | Msa1232790:intron | 25.0% |
| !!! | GATGAATTCTGGAAATTTTT+GGG | - | chr8_2:9387186-9387205 | Msa1232790:intron | 25.0% |
| !!! | TAGGCTTTTGGAAAAAATAT+TGG | - | chr8_2:9387874-9387893 | Msa1232790:CDS | 25.0% |
| AGTTGCATGTATATCAAATC+CGG | - | chr8_2:9386539-9386558 | Msa1232790:CDS | 30.0% | |
| AGATTAAGCTGATATGTTTG+CGG | + | chr8_2:9386644-9386663 | None:intergenic | 30.0% | |
| CTTAGATATAAAACACCCTA+AGG | - | chr8_2:9386662-9386681 | Msa1232790:CDS | 30.0% | |
| AGGATGAAAGATTCGATATA+GGG | - | chr8_2:9386685-9386704 | Msa1232790:CDS | 30.0% | |
| AAAAGAATTAAGCTAAGGGA+CGG | + | chr8_2:9386912-9386931 | None:intergenic | 30.0% | |
| !! | TTTCGAAATTTTTAGGCAAG+GGG | - | chr8_2:9386931-9386950 | Msa1232790:CDS | 30.0% |
| ! | GGTTTTCTGTTTATTCACAA+AGG | - | chr8_2:9387025-9387044 | Msa1232790:intron | 30.0% |
| !!! | TTGGGTGCTATTCATTTTTT+AGG | - | chr8_2:9387110-9387129 | Msa1232790:CDS | 30.0% |
| !!! | ATTTTTGGGTCAACAAATTC+TGG | - | chr8_2:9387200-9387219 | Msa1232790:intron | 30.0% |
| GAATTCAAGTGATTACTACT+TGG | - | chr8_2:9387345-9387364 | Msa1232790:intron | 30.0% | |
| TGCAACAAACAATCTTCTAT+AGG | - | chr8_2:9387671-9387690 | Msa1232790:intron | 30.0% | |
| AGTTGCATGTATATCAAATC+CGG | - | chr8_2:9386539-9386558 | Msa1232790:CDS | 30.0% | |
| AGATTAAGCTGATATGTTTG+CGG | + | chr8_2:9386644-9386663 | None:intergenic | 30.0% | |
| CTTAGATATAAAACACCCTA+AGG | - | chr8_2:9386662-9386681 | Msa1232790:CDS | 30.0% | |
| AGGATGAAAGATTCGATATA+GGG | - | chr8_2:9386685-9386704 | Msa1232790:CDS | 30.0% | |
| AAAAGAATTAAGCTAAGGGA+CGG | + | chr8_2:9386912-9386931 | None:intergenic | 30.0% | |
| !! | TTTCGAAATTTTTAGGCAAG+GGG | - | chr8_2:9386931-9386950 | Msa1232790:CDS | 30.0% |
| ! | GGTTTTCTGTTTATTCACAA+AGG | - | chr8_2:9387025-9387044 | Msa1232790:intron | 30.0% |
| !!! | TTGGGTGCTATTCATTTTTT+AGG | - | chr8_2:9387110-9387129 | Msa1232790:CDS | 30.0% |
| !!! | ATTTTTGGGTCAACAAATTC+TGG | - | chr8_2:9387200-9387219 | Msa1232790:intron | 30.0% |
| GAATTCAAGTGATTACTACT+TGG | - | chr8_2:9387345-9387364 | Msa1232790:intron | 30.0% | |
| TGCAACAAACAATCTTCTAT+AGG | - | chr8_2:9387671-9387690 | Msa1232790:intron | 30.0% | |
| GTTGCATGTATATCAAATCC+GGG | - | chr8_2:9386540-9386559 | Msa1232790:CDS | 35.0% | |
| AGATATAAAACACCCTAAGG+AGG | - | chr8_2:9386665-9386684 | Msa1232790:CDS | 35.0% | |
| GAGGATGAAAGATTCGATAT+AGG | - | chr8_2:9386684-9386703 | Msa1232790:CDS | 35.0% | |
| GGATGAAAGATTCGATATAG+GGG | - | chr8_2:9386686-9386705 | Msa1232790:CDS | 35.0% | |
| GATGAAAGATTCGATATAGG+GGG | - | chr8_2:9386687-9386706 | Msa1232790:CDS | 35.0% | |
| !!! | GGTATTGTTTTTGACAGGTA+TGG | - | chr8_2:9386776-9386795 | Msa1232790:CDS | 35.0% |
| AAAGAATTAAGCTAAGGGAC+GGG | + | chr8_2:9386911-9386930 | None:intergenic | 35.0% | |
| TCTGTTTATTCACAAAGGTC+TGG | - | chr8_2:9387030-9387049 | Msa1232790:intron | 35.0% | |
| CTGTTTATTCACAAAGGTCT+GGG | - | chr8_2:9387031-9387050 | Msa1232790:intron | 35.0% | |
| !! | AGGATAAATTTTAGGAAGGG+TGG | - | chr8_2:9387130-9387149 | Msa1232790:CDS | 35.0% |
| ! | ATGAAGATGGTGATGAATTC+TGG | - | chr8_2:9387175-9387194 | Msa1232790:intron | 35.0% |
| ATGAATTTGTATACAGGGCA+TGG | - | chr8_2:9387292-9387311 | Msa1232790:intron | 35.0% | |
| ACCATAGATACGAGAATCAT+CGG | + | chr8_2:9387377-9387396 | None:intergenic | 35.0% | |
| ! | ACGATATGACTTGTAGAGTT+GGG | + | chr8_2:9387608-9387627 | None:intergenic | 35.0% |
| AACAATCTTCTATAGGTGAG+AGG | - | chr8_2:9387678-9387697 | Msa1232790:intron | 35.0% | |
| ! | GCTTTCTTTTTATGAACCTC+GGG | + | chr8_2:9387733-9387752 | None:intergenic | 35.0% |
| ! | CGCTTTCTTTTTATGAACCT+CGG | + | chr8_2:9387734-9387753 | None:intergenic | 35.0% |
| AGGTTCATAAAAAGAAAGCG+TGG | - | chr8_2:9387734-9387753 | Msa1232790:CDS | 35.0% | |
| GTTGCATGTATATCAAATCC+GGG | - | chr8_2:9386540-9386559 | Msa1232790:CDS | 35.0% | |
| AGATATAAAACACCCTAAGG+AGG | - | chr8_2:9386665-9386684 | Msa1232790:CDS | 35.0% | |
| GAGGATGAAAGATTCGATAT+AGG | - | chr8_2:9386684-9386703 | Msa1232790:CDS | 35.0% | |
| GGATGAAAGATTCGATATAG+GGG | - | chr8_2:9386686-9386705 | Msa1232790:CDS | 35.0% | |
| GATGAAAGATTCGATATAGG+GGG | - | chr8_2:9386687-9386706 | Msa1232790:CDS | 35.0% | |
| !!! | GGTATTGTTTTTGACAGGTA+TGG | - | chr8_2:9386776-9386795 | Msa1232790:CDS | 35.0% |
| AAAGAATTAAGCTAAGGGAC+GGG | + | chr8_2:9386911-9386930 | None:intergenic | 35.0% | |
| TCTGTTTATTCACAAAGGTC+TGG | - | chr8_2:9387030-9387049 | Msa1232790:intron | 35.0% | |
| CTGTTTATTCACAAAGGTCT+GGG | - | chr8_2:9387031-9387050 | Msa1232790:intron | 35.0% | |
| !! | AGGATAAATTTTAGGAAGGG+TGG | - | chr8_2:9387130-9387149 | Msa1232790:CDS | 35.0% |
| ! | ATGAAGATGGTGATGAATTC+TGG | - | chr8_2:9387175-9387194 | Msa1232790:intron | 35.0% |
| ATGAATTTGTATACAGGGCA+TGG | - | chr8_2:9387292-9387311 | Msa1232790:intron | 35.0% | |
| ACCATAGATACGAGAATCAT+CGG | + | chr8_2:9387377-9387396 | None:intergenic | 35.0% | |
| ! | ACGATATGACTTGTAGAGTT+GGG | + | chr8_2:9387608-9387627 | None:intergenic | 35.0% |
| AACAATCTTCTATAGGTGAG+AGG | - | chr8_2:9387678-9387697 | Msa1232790:intron | 35.0% | |
| ! | GCTTTCTTTTTATGAACCTC+GGG | + | chr8_2:9387733-9387752 | None:intergenic | 35.0% |
| ! | CGCTTTCTTTTTATGAACCT+CGG | + | chr8_2:9387734-9387753 | None:intergenic | 35.0% |
| AGGTTCATAAAAAGAAAGCG+TGG | - | chr8_2:9387734-9387753 | Msa1232790:CDS | 35.0% | |
| CGAATCTTTCATCCTCCTTA+GGG | + | chr8_2:9386680-9386699 | None:intergenic | 40.0% | |
| TCGAATCTTTCATCCTCCTT+AGG | + | chr8_2:9386681-9386700 | None:intergenic | 40.0% | |
| !!! | GGTGTGGTATTGTTTTTGAC+AGG | - | chr8_2:9386771-9386790 | Msa1232790:CDS | 40.0% |
| AATTTGTATACAGGGCATGG+AGG | - | chr8_2:9387295-9387314 | Msa1232790:intron | 40.0% | |
| ACCGATGATTCTCGTATCTA+TGG | - | chr8_2:9387373-9387392 | Msa1232790:intron | 40.0% | |
| ! | GACGATATGACTTGTAGAGT+TGG | + | chr8_2:9387609-9387628 | None:intergenic | 40.0% |
| GACGCTATCATTACTGCATT+AGG | + | chr8_2:9387647-9387666 | None:intergenic | 40.0% | |
| ! | AGAAGATTGTTTGTTGCAGC+AGG | + | chr8_2:9387669-9387688 | None:intergenic | 40.0% |
| TCTATAGGTGAGAGGTTCAA+TGG | - | chr8_2:9387686-9387705 | Msa1232790:intron | 40.0% | |
| TTTATGAACCTCGGGAACAA+TGG | + | chr8_2:9387725-9387744 | None:intergenic | 40.0% | |
| ! | TTCTCCTTTTAACAGCCTTG+AGG | + | chr8_2:9387781-9387800 | None:intergenic | 40.0% |
| !! | ACAAAAAAGTGCCGGTTGTT+GGG | + | chr8_2:9387915-9387934 | None:intergenic | 40.0% |
| !! | TACAAAAAAGTGCCGGTTGT+TGG | + | chr8_2:9387916-9387935 | None:intergenic | 40.0% |
| CGAATCTTTCATCCTCCTTA+GGG | + | chr8_2:9386680-9386699 | None:intergenic | 40.0% | |
| TCGAATCTTTCATCCTCCTT+AGG | + | chr8_2:9386681-9386700 | None:intergenic | 40.0% | |
| !!! | GGTGTGGTATTGTTTTTGAC+AGG | - | chr8_2:9386771-9386790 | Msa1232790:CDS | 40.0% |
| AATTTGTATACAGGGCATGG+AGG | - | chr8_2:9387295-9387314 | Msa1232790:intron | 40.0% | |
| ACCGATGATTCTCGTATCTA+TGG | - | chr8_2:9387373-9387392 | Msa1232790:intron | 40.0% | |
| ! | GACGATATGACTTGTAGAGT+TGG | + | chr8_2:9387609-9387628 | None:intergenic | 40.0% |
| GACGCTATCATTACTGCATT+AGG | + | chr8_2:9387647-9387666 | None:intergenic | 40.0% | |
| ! | AGAAGATTGTTTGTTGCAGC+AGG | + | chr8_2:9387669-9387688 | None:intergenic | 40.0% |
| TCTATAGGTGAGAGGTTCAA+TGG | - | chr8_2:9387686-9387705 | Msa1232790:intron | 40.0% | |
| TTTATGAACCTCGGGAACAA+TGG | + | chr8_2:9387725-9387744 | None:intergenic | 40.0% | |
| ! | TTCTCCTTTTAACAGCCTTG+AGG | + | chr8_2:9387781-9387800 | None:intergenic | 40.0% |
| !! | ACAAAAAAGTGCCGGTTGTT+GGG | + | chr8_2:9387915-9387934 | None:intergenic | 40.0% |
| !! | TACAAAAAAGTGCCGGTTGT+TGG | + | chr8_2:9387916-9387935 | None:intergenic | 40.0% |
| TAAGCAGACGTGATACAACC+TGG | + | chr8_2:9386582-9386601 | None:intergenic | 45.0% | |
| AAACAATACCACACCATCCC+CGG | + | chr8_2:9386766-9386785 | None:intergenic | 45.0% | |
| !! | GGGGATTTTGCTGTGTTGTA+TGG | - | chr8_2:9386950-9386969 | Msa1232790:CDS | 45.0% |
| TGCTGTGTTGTATGGTGTGA+TGG | - | chr8_2:9386958-9386977 | Msa1232790:CDS | 45.0% | |
| TATGGTGTGATGGTCACTAG+TGG | - | chr8_2:9386968-9386987 | Msa1232790:CDS | 45.0% | |
| ! | GTATTGTCTCATGGTCTTGC+TGG | - | chr8_2:9386998-9387017 | Msa1232790:intron | 45.0% |
| !! | TCTCATGGTCTTGCTGGTTT+CGG | - | chr8_2:9387004-9387023 | Msa1232790:intron | 45.0% |
| ! | CGGTGTTGGAAAGATGAAGA+TGG | - | chr8_2:9387162-9387181 | Msa1232790:CDS | 45.0% |
| TATCACATCTCCTTTGCTGC+AGG | - | chr8_2:9387467-9387486 | Msa1232790:intron | 45.0% | |
| TCCTGCTAACCTCTCTTGTA+CGG | - | chr8_2:9387520-9387539 | Msa1232790:intron | 45.0% | |
| ! | GGGACCAATTTGTTCCTTAG+CGG | + | chr8_2:9387588-9387607 | None:intergenic | 45.0% |
| ! | GGTGAGAGGTTCAATGGATT+TGG | - | chr8_2:9387692-9387711 | Msa1232790:intron | 45.0% |
| GATATCATCCATTGTTCCCG+AGG | - | chr8_2:9387714-9387733 | Msa1232790:CDS | 45.0% | |
| GAGGAGAGATTCCACAAACA+AGG | + | chr8_2:9387762-9387781 | None:intergenic | 45.0% | |
| GTTTGTGGAATCTCTCCTCA+AGG | - | chr8_2:9387763-9387782 | Msa1232790:CDS | 45.0% | |
| CTCTCCTCAAGGCTGTTAAA+AGG | - | chr8_2:9387774-9387793 | Msa1232790:CDS | 45.0% | |
| CTTTCTCTTCTTCCCTTGGT+GGG | + | chr8_2:9387816-9387835 | None:intergenic | 45.0% | |
| ACTTTCTCTTCTTCCCTTGG+TGG | + | chr8_2:9387817-9387836 | None:intergenic | 45.0% | |
| TGCACTTTCTCTTCTTCCCT+TGG | + | chr8_2:9387820-9387839 | None:intergenic | 45.0% | |
| AGTGCAGAGTCACCAACAAA+AGG | - | chr8_2:9387834-9387853 | Msa1232790:CDS | 45.0% | |
| CAGAGTCACCAACAAAAGGT+TGG | - | chr8_2:9387838-9387857 | Msa1232790:CDS | 45.0% | |
| ! | GTGTCGCTACAAAAAAGTGC+CGG | + | chr8_2:9387923-9387942 | None:intergenic | 45.0% |
| TAGAAAGTCCAGCCTTGCTT+GGG | + | chr8_2:9387945-9387964 | None:intergenic | 45.0% | |
| TAAGCAGACGTGATACAACC+TGG | + | chr8_2:9386582-9386601 | None:intergenic | 45.0% | |
| AAACAATACCACACCATCCC+CGG | + | chr8_2:9386766-9386785 | None:intergenic | 45.0% | |
| !! | GGGGATTTTGCTGTGTTGTA+TGG | - | chr8_2:9386950-9386969 | Msa1232790:CDS | 45.0% |
| TGCTGTGTTGTATGGTGTGA+TGG | - | chr8_2:9386958-9386977 | Msa1232790:CDS | 45.0% | |
| TATGGTGTGATGGTCACTAG+TGG | - | chr8_2:9386968-9386987 | Msa1232790:CDS | 45.0% | |
| ! | GTATTGTCTCATGGTCTTGC+TGG | - | chr8_2:9386998-9387017 | Msa1232790:intron | 45.0% |
| !! | TCTCATGGTCTTGCTGGTTT+CGG | - | chr8_2:9387004-9387023 | Msa1232790:intron | 45.0% |
| ! | CGGTGTTGGAAAGATGAAGA+TGG | - | chr8_2:9387162-9387181 | Msa1232790:CDS | 45.0% |
| TATCACATCTCCTTTGCTGC+AGG | - | chr8_2:9387467-9387486 | Msa1232790:intron | 45.0% | |
| TCCTGCTAACCTCTCTTGTA+CGG | - | chr8_2:9387520-9387539 | Msa1232790:intron | 45.0% | |
| ! | GGGACCAATTTGTTCCTTAG+CGG | + | chr8_2:9387588-9387607 | None:intergenic | 45.0% |
| ! | GGTGAGAGGTTCAATGGATT+TGG | - | chr8_2:9387692-9387711 | Msa1232790:intron | 45.0% |
| GATATCATCCATTGTTCCCG+AGG | - | chr8_2:9387714-9387733 | Msa1232790:CDS | 45.0% | |
| GAGGAGAGATTCCACAAACA+AGG | + | chr8_2:9387762-9387781 | None:intergenic | 45.0% | |
| GTTTGTGGAATCTCTCCTCA+AGG | - | chr8_2:9387763-9387782 | Msa1232790:CDS | 45.0% | |
| CTCTCCTCAAGGCTGTTAAA+AGG | - | chr8_2:9387774-9387793 | Msa1232790:CDS | 45.0% | |
| CTTTCTCTTCTTCCCTTGGT+GGG | + | chr8_2:9387816-9387835 | None:intergenic | 45.0% | |
| ACTTTCTCTTCTTCCCTTGG+TGG | + | chr8_2:9387817-9387836 | None:intergenic | 45.0% | |
| TGCACTTTCTCTTCTTCCCT+TGG | + | chr8_2:9387820-9387839 | None:intergenic | 45.0% | |
| AGTGCAGAGTCACCAACAAA+AGG | - | chr8_2:9387834-9387853 | Msa1232790:CDS | 45.0% | |
| CAGAGTCACCAACAAAAGGT+TGG | - | chr8_2:9387838-9387857 | Msa1232790:CDS | 45.0% | |
| ! | GTGTCGCTACAAAAAAGTGC+CGG | + | chr8_2:9387923-9387942 | None:intergenic | 45.0% |
| TAGAAAGTCCAGCCTTGCTT+GGG | + | chr8_2:9387945-9387964 | None:intergenic | 45.0% | |
| ATACAACCTGGACGTGCATC+AGG | + | chr8_2:9386570-9386589 | None:intergenic | 50.0% | |
| CGATATAGGGGGAACTTCTG+AGG | - | chr8_2:9386698-9386717 | Msa1232790:CDS | 50.0% | |
| ATGGTCTCCGAATCTGTACC+CGG | - | chr8_2:9386744-9386763 | Msa1232790:CDS | 50.0% | |
| AACAATACCACACCATCCCC+GGG | + | chr8_2:9386765-9386784 | None:intergenic | 50.0% | |
| GTGTGATGGTCACTAGTGGT+GGG | - | chr8_2:9386972-9386991 | Msa1232790:CDS | 50.0% | |
| ! | GGTGGGAGTGTATTGTCTCA+TGG | - | chr8_2:9386989-9387008 | Msa1232790:CDS | 50.0% |
| AGGAAGGGTGGTGAAGATGA+CGG | - | chr8_2:9387142-9387161 | Msa1232790:CDS | 50.0% | |
| AAGGTCTGAACCTGCAGCAA+AGG | + | chr8_2:9387480-9387499 | None:intergenic | 50.0% | |
| ACCGTACAAGAGAGGTTAGC+AGG | + | chr8_2:9387524-9387543 | None:intergenic | 50.0% | |
| CCACAATCACCGTACAAGAG+AGG | + | chr8_2:9387532-9387551 | None:intergenic | 50.0% | |
| CCTCTCTTGTACGGTGATTG+TGG | - | chr8_2:9387529-9387548 | Msa1232790:intron | 50.0% | |
| ! | AAAGCGTGGCACCTTGTTTG+TGG | - | chr8_2:9387748-9387767 | Msa1232790:CDS | 50.0% |
| ! | CCTTCGCACCAACCTTTTGT+TGG | + | chr8_2:9387849-9387868 | None:intergenic | 50.0% |
| !! | CCAACAAAAGGTTGGTGCGA+AGG | - | chr8_2:9387846-9387865 | Msa1232790:CDS | 50.0% |
| ! | GCGAAGGATTGCTAGGCTTT+TGG | - | chr8_2:9387862-9387881 | Msa1232790:CDS | 50.0% |
| AGATGGGGAAACCCAACAAC+CGG | - | chr8_2:9387901-9387920 | Msa1232790:CDS | 50.0% | |
| TTTGTAGCGACACCCAAGCA+AGG | - | chr8_2:9387930-9387949 | Msa1232790:CDS | 50.0% | |
| CTAGAAAGTCCAGCCTTGCT+TGG | + | chr8_2:9387946-9387965 | None:intergenic | 50.0% | |
| CAAGCAAGGCTGGACTTTCT+AGG | - | chr8_2:9387944-9387963 | Msa1232790:CDS | 50.0% | |
| ATACAACCTGGACGTGCATC+AGG | + | chr8_2:9386570-9386589 | None:intergenic | 50.0% | |
| CGATATAGGGGGAACTTCTG+AGG | - | chr8_2:9386698-9386717 | Msa1232790:CDS | 50.0% | |
| ATGGTCTCCGAATCTGTACC+CGG | - | chr8_2:9386744-9386763 | Msa1232790:CDS | 50.0% | |
| AACAATACCACACCATCCCC+GGG | + | chr8_2:9386765-9386784 | None:intergenic | 50.0% | |
| GTGTGATGGTCACTAGTGGT+GGG | - | chr8_2:9386972-9386991 | Msa1232790:CDS | 50.0% | |
| ! | GGTGGGAGTGTATTGTCTCA+TGG | - | chr8_2:9386989-9387008 | Msa1232790:CDS | 50.0% |
| AGGAAGGGTGGTGAAGATGA+CGG | - | chr8_2:9387142-9387161 | Msa1232790:CDS | 50.0% | |
| AAGGTCTGAACCTGCAGCAA+AGG | + | chr8_2:9387480-9387499 | None:intergenic | 50.0% | |
| ACCGTACAAGAGAGGTTAGC+AGG | + | chr8_2:9387524-9387543 | None:intergenic | 50.0% | |
| CCACAATCACCGTACAAGAG+AGG | + | chr8_2:9387532-9387551 | None:intergenic | 50.0% | |
| CCTCTCTTGTACGGTGATTG+TGG | - | chr8_2:9387529-9387548 | Msa1232790:intron | 50.0% | |
| ! | AAAGCGTGGCACCTTGTTTG+TGG | - | chr8_2:9387748-9387767 | Msa1232790:CDS | 50.0% |
| ! | CCTTCGCACCAACCTTTTGT+TGG | + | chr8_2:9387849-9387868 | None:intergenic | 50.0% |
| !! | CCAACAAAAGGTTGGTGCGA+AGG | - | chr8_2:9387846-9387865 | Msa1232790:CDS | 50.0% |
| ! | GCGAAGGATTGCTAGGCTTT+TGG | - | chr8_2:9387862-9387881 | Msa1232790:CDS | 50.0% |
| AGATGGGGAAACCCAACAAC+CGG | - | chr8_2:9387901-9387920 | Msa1232790:CDS | 50.0% | |
| TTTGTAGCGACACCCAAGCA+AGG | - | chr8_2:9387930-9387949 | Msa1232790:CDS | 50.0% | |
| CTAGAAAGTCCAGCCTTGCT+TGG | + | chr8_2:9387946-9387965 | None:intergenic | 50.0% | |
| CAAGCAAGGCTGGACTTTCT+AGG | - | chr8_2:9387944-9387963 | Msa1232790:CDS | 50.0% | |
| TGGTCTCCGAATCTGTACCC+GGG | - | chr8_2:9386745-9386764 | Msa1232790:CDS | 55.0% | |
| ACCATCCCCGGGTACAGATT+CGG | + | chr8_2:9386754-9386773 | None:intergenic | 55.0% | |
| GGTGTGATGGTCACTAGTGG+TGG | - | chr8_2:9386971-9386990 | Msa1232790:CDS | 55.0% | |
| ! | GGTGGTGAAGATGACGGTGT+TGG | - | chr8_2:9387148-9387167 | Msa1232790:CDS | 55.0% |
| TACAGGGCATGGAGGAACTG+TGG | - | chr8_2:9387303-9387322 | Msa1232790:intron | 55.0% | |
| GGCGCCGCTAAGGAACAAAT+TGG | - | chr8_2:9387581-9387600 | Msa1232790:intron | 55.0% | |
| AAGCGTAGAGTCACCCACCA+AGG | - | chr8_2:9387800-9387819 | Msa1232790:CDS | 55.0% | |
| AGCGTAGAGTCACCCACCAA+GGG | - | chr8_2:9387801-9387820 | Msa1232790:CDS | 55.0% | |
| ! | GGTTGGTGCGAAGGATTGCT+AGG | - | chr8_2:9387855-9387874 | Msa1232790:CDS | 55.0% |
| TGGTCTCCGAATCTGTACCC+GGG | - | chr8_2:9386745-9386764 | Msa1232790:CDS | 55.0% | |
| ACCATCCCCGGGTACAGATT+CGG | + | chr8_2:9386754-9386773 | None:intergenic | 55.0% | |
| GGTGTGATGGTCACTAGTGG+TGG | - | chr8_2:9386971-9386990 | Msa1232790:CDS | 55.0% | |
| ! | GGTGGTGAAGATGACGGTGT+TGG | - | chr8_2:9387148-9387167 | Msa1232790:CDS | 55.0% |
| TACAGGGCATGGAGGAACTG+TGG | - | chr8_2:9387303-9387322 | Msa1232790:intron | 55.0% | |
| GGCGCCGCTAAGGAACAAAT+TGG | - | chr8_2:9387581-9387600 | Msa1232790:intron | 55.0% | |
| AAGCGTAGAGTCACCCACCA+AGG | - | chr8_2:9387800-9387819 | Msa1232790:CDS | 55.0% | |
| AGCGTAGAGTCACCCACCAA+GGG | - | chr8_2:9387801-9387820 | Msa1232790:CDS | 55.0% | |
| ! | GGTTGGTGCGAAGGATTGCT+AGG | - | chr8_2:9387855-9387874 | Msa1232790:CDS | 55.0% |
| GGTCTCCGAATCTGTACCCG+GGG | - | chr8_2:9386746-9386765 | Msa1232790:CDS | 60.0% | |
| TCCGAATCTGTACCCGGGGA+TGG | - | chr8_2:9386750-9386769 | Msa1232790:CDS | 60.0% | |
| ATCTGTACCCGGGGATGGTG+TGG | - | chr8_2:9386755-9386774 | Msa1232790:CDS | 60.0% | |
| AGGGCATGGAGGAACTGTGG+AGG | - | chr8_2:9387306-9387325 | Msa1232790:intron | 60.0% | |
| GCATGGAGGAACTGTGGAGG+AGG | - | chr8_2:9387309-9387328 | Msa1232790:intron | 60.0% | |
| GTGGACGCTTGTTTCAGCGC+CGG | - | chr8_2:9387548-9387567 | Msa1232790:intron | 60.0% | |
| !!! | TTCAGCGCCGGCCTTTTCGA+AGG | - | chr8_2:9387560-9387579 | Msa1232790:intron | 60.0% |
| CCTTAGCGGCGCCTTCGAAA+AGG | + | chr8_2:9387574-9387593 | None:intergenic | 60.0% | |
| !!! | CCTTTTCGAAGGCGCCGCTA+AGG | - | chr8_2:9387571-9387590 | Msa1232790:intron | 60.0% |
| TAGCGACACCCAAGCAAGGC+TGG | - | chr8_2:9387934-9387953 | Msa1232790:CDS | 60.0% | |
| GGTCTCCGAATCTGTACCCG+GGG | - | chr8_2:9386746-9386765 | Msa1232790:CDS | 60.0% | |
| TCCGAATCTGTACCCGGGGA+TGG | - | chr8_2:9386750-9386769 | Msa1232790:CDS | 60.0% | |
| ATCTGTACCCGGGGATGGTG+TGG | - | chr8_2:9386755-9386774 | Msa1232790:CDS | 60.0% | |
| AGGGCATGGAGGAACTGTGG+AGG | - | chr8_2:9387306-9387325 | Msa1232790:intron | 60.0% | |
| GCATGGAGGAACTGTGGAGG+AGG | - | chr8_2:9387309-9387328 | Msa1232790:intron | 60.0% | |
| GTGGACGCTTGTTTCAGCGC+CGG | - | chr8_2:9387548-9387567 | Msa1232790:intron | 60.0% | |
| !!! | TTCAGCGCCGGCCTTTTCGA+AGG | - | chr8_2:9387560-9387579 | Msa1232790:intron | 60.0% |
| CCTTAGCGGCGCCTTCGAAA+AGG | + | chr8_2:9387574-9387593 | None:intergenic | 60.0% | |
| !!! | CCTTTTCGAAGGCGCCGCTA+AGG | - | chr8_2:9387571-9387590 | Msa1232790:intron | 60.0% |
| TAGCGACACCCAAGCAAGGC+TGG | - | chr8_2:9387934-9387953 | Msa1232790:CDS | 60.0% | |
| GGACGTGCATCAGGAGCTCC+CGG | + | chr8_2:9386561-9386580 | None:intergenic | 65.0% | |
| GGAGCTCCTGATGCACGTCC+AGG | - | chr8_2:9386561-9386580 | Msa1232790:CDS | 65.0% | |
| AGCGGCGCCTTCGAAAAGGC+CGG | + | chr8_2:9387570-9387589 | None:intergenic | 65.0% | |
| GGACGTGCATCAGGAGCTCC+CGG | + | chr8_2:9386561-9386580 | None:intergenic | 65.0% | |
| GGAGCTCCTGATGCACGTCC+AGG | - | chr8_2:9386561-9386580 | Msa1232790:CDS | 65.0% | |
| AGCGGCGCCTTCGAAAAGGC+CGG | + | chr8_2:9387570-9387589 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 9386522 | 9387979 | 9386522 | ID=Msa1232790;Name=Msa1232790 |
| chr8_2 | mRNA | 9386522 | 9387979 | 9386522 | ID=Msa1232790-mRNA-1;Parent=Msa1232790;Name=Msa1232790-mRNA-1;_AED=0.64;_eAED=0.64;_QI=0|0|0|0.33|1|1|3|0|282 |
| chr8_2 | exon | 9387709 | 9387979 | 9387709 | ID=Msa1232790-mRNA-1:exon:3772;Parent=Msa1232790-mRNA-1 |
| chr8_2 | exon | 9387107 | 9387193 | 9387107 | ID=Msa1232790-mRNA-1:exon:3771;Parent=Msa1232790-mRNA-1 |
| chr8_2 | exon | 9386522 | 9387012 | 9386522 | ID=Msa1232790-mRNA-1:exon:3770;Parent=Msa1232790-mRNA-1 |
| chr8_2 | CDS | 9387709 | 9387979 | 9387709 | ID=Msa1232790-mRNA-1:cds;Parent=Msa1232790-mRNA-1 |
| chr8_2 | CDS | 9387107 | 9387193 | 9387107 | ID=Msa1232790-mRNA-1:cds;Parent=Msa1232790-mRNA-1 |
| chr8_2 | CDS | 9386522 | 9387012 | 9386522 | ID=Msa1232790-mRNA-1:cds;Parent=Msa1232790-mRNA-1 |
| Gene Sequence |
| Protein sequence |
