Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1178420 | XP_013442054.1 | 26.490 | 302 | 168 | 10 | 3 | 279 | 4 | 276 | 1.63e-19 | 97.1 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1178420 | sp|Q6XPT5|MCA7_ARATH | 28.313 | 166 | 108 | 5 | 1 | 163 | 1 | 158 | 5.38e-15 | 77.8 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0434180 | Msa1178420 | 0.801931 | 7.134324e-49 | -8.615850e-47 |
| Msa1178420 | Msa1232620 | 0.979160 | 2.314958e-147 | -8.615850e-47 |
| Msa1178420 | Msa1232790 | 0.970713 | 4.885090e-132 | -8.615850e-47 |
| Msa1178420 | Msa1313340 | 0.937483 | 3.219414e-98 | -8.615850e-47 |
| Msa1178420 | Msa1313410 | 0.979752 | 1.154692e-148 | -8.615850e-47 |
| Msa0864070 | Msa1178420 | 0.800805 | 1.213084e-48 | -8.615850e-47 |
| Msa0888260 | Msa1178420 | 0.803345 | 3.643849e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1178420 | MtrunA17_Chr8g0356911 | 26.490 | 302 | 168 | 10 | 3 | 279 | 4 | 276 | 1.50e-23 | 97.1 |
| Msa1178420 | MtrunA17_Chr2g0309701 | 27.660 | 235 | 146 | 8 | 1 | 223 | 4 | 226 | 1.14e-17 | 82.4 |
| Msa1178420 | MtrunA17_Chr1g0175941 | 24.296 | 284 | 167 | 7 | 17 | 279 | 32 | 288 | 2.89e-17 | 81.6 |
| Msa1178420 | MtrunA17_Chr8g0356311 | 28.659 | 164 | 106 | 4 | 1 | 161 | 1 | 156 | 7.51e-15 | 73.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1178420 | AT1G79310.1 | 28.313 | 166 | 108 | 5 | 1 | 163 | 1 | 158 | 5.47e-16 | 77.8 |
| Msa1178420 | AT1G79340.1 | 29.268 | 164 | 105 | 4 | 1 | 161 | 1 | 156 | 3.08e-15 | 75.5 |
| Msa1178420 | AT1G79330.1 | 28.049 | 164 | 107 | 4 | 1 | 161 | 1 | 156 | 1.81e-14 | 73.2 |
| Msa1178420 | AT1G79320.1 | 28.659 | 164 | 106 | 4 | 1 | 161 | 1 | 156 | 1.41e-13 | 70.5 |
Find 71 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGATGAAAGATTCGATATA+GGG | 0.266282 | 8_1:-11136802 | Msa1178420:CDS |
| GCGAAGGATTGCTAGGCTTT+TGG | 0.269483 | 8_1:-11135625 | Msa1178420:CDS |
| GGTGAGAGGTTCAATGGATT+TGG | 0.295447 | 8_1:-11135795 | Msa1178420:CDS |
| TGCACTTTCTCTTCTTCCCT+TGG | 0.325486 | 8_1:+11135670 | None:intergenic |
| CTCTCCTCAAGGCTGTTAAA+AGG | 0.327370 | 8_1:-11135713 | Msa1178420:CDS |
| GAGGATGAAAGATTCGATAT+AGG | 0.329537 | 8_1:-11136803 | Msa1178420:CDS |
| TCGAATCTTTCATCCTCCTT+AGG | 0.336446 | 8_1:+11136809 | None:intergenic |
| CAAGCAAGGCTGGACTTTCT+AGG | 0.356897 | 8_1:-11135543 | Msa1178420:CDS |
| ACCGATGATTCTCGTATCTA+TGG | 0.370000 | 8_1:-11136114 | Msa1178420:intron |
| AGAACTAAAGCTAAAAGATA+TGG | 0.401543 | 8_1:-11136762 | Msa1178420:CDS |
| CTTTCTCTTCTTCCCTTGGT+GGG | 0.408662 | 8_1:+11135674 | None:intergenic |
| CGAATCTTTCATCCTCCTTA+GGG | 0.417346 | 8_1:+11136810 | None:intergenic |
| AGAAGATTGTTTGTTGCAGC+AGG | 0.433609 | 8_1:+11135821 | None:intergenic |
| TGAAGCACTTACTATGCAAT+TGG | 0.434616 | 8_1:+11135519 | None:intergenic |
| GGCGCCGCTAAGGAACAAAT+TGG | 0.441061 | 8_1:-11135906 | Msa1178420:CDS |
| AGTTGCATGTATATCAAATC+CGG | 0.442599 | 8_1:-11136948 | Msa1178420:CDS |
| ACTTTCTCTTCTTCCCTTGG+TGG | 0.444200 | 8_1:+11135673 | None:intergenic |
| GGAGCTCCTGATGCACGTCC+AGG | 0.447425 | 8_1:-11136926 | Msa1178420:CDS |
| TCTATAGGTGAGAGGTTCAA+TGG | 0.447603 | 8_1:-11135801 | Msa1178420:CDS |
| AAAGCGTGGCACCTTGTTTG+TGG | 0.447697 | 8_1:-11135739 | Msa1178420:CDS |
| TGCAACAAACAATCTTCTAT+AGG | 0.464135 | 8_1:-11135816 | Msa1178420:CDS |
| CTAGAAAGTCCAGCCTTGCT+TGG | 0.464626 | 8_1:+11135544 | None:intergenic |
| AGATGGGGAAACCCAACAAC+CGG | 0.467871 | 8_1:-11135586 | Msa1178420:CDS |
| ACCATCCCCGGGTACAGATT+CGG | 0.474186 | 8_1:+11136736 | None:intergenic |
| ATACAACCTGGACGTGCATC+AGG | 0.474598 | 8_1:+11136920 | None:intergenic |
| AAACAATACCACACCATCCC+CGG | 0.480304 | 8_1:+11136724 | None:intergenic |
| AGATTAAGCTGATATGTTTG+CGG | 0.481248 | 8_1:+11136846 | None:intergenic |
| ACGATATGACTTGTAGAGTT+GGG | 0.481724 | 8_1:+11135882 | None:intergenic |
| GACGCTATCATTACTGCATT+AGG | 0.482601 | 8_1:+11135843 | None:intergenic |
| CCTTAGCGGCGCCTTCGAAA+AGG | 0.483351 | 8_1:+11135916 | None:intergenic |
| GCATGGAGGAACTGTGGAGG+AGG | 0.484418 | 8_1:-11136178 | Msa1178420:CDS |
| CCTCTCTTGTACGGTGATTG+TGG | 0.490171 | 8_1:-11135958 | Msa1178420:CDS |
| TAGCGACACCCAAGCAAGGC+TGG | 0.490789 | 8_1:-11135553 | Msa1178420:CDS |
| TAGAAAGTCCAGCCTTGCTT+GGG | 0.500080 | 8_1:+11135545 | None:intergenic |
| GGGACCAATTTGTTCCTTAG+CGG | 0.507529 | 8_1:+11135902 | None:intergenic |
| ATGGTCTCCGAATCTGTACC+CGG | 0.509670 | 8_1:-11136743 | Msa1178420:CDS |
| GACGATATGACTTGTAGAGT+TGG | 0.510842 | 8_1:+11135881 | None:intergenic |
| GAATTCAAGTGATTACTACT+TGG | 0.517361 | 8_1:-11136142 | Msa1178420:CDS |
| GGATGAAAGATTCGATATAG+GGG | 0.520357 | 8_1:-11136801 | Msa1178420:CDS |
| TCCGAATCTGTACCCGGGGA+TGG | 0.522031 | 8_1:-11136737 | Msa1178420:CDS |
| ATCTGTACCCGGGGATGGTG+TGG | 0.522914 | 8_1:-11136732 | Msa1178420:CDS |
| ACCGTACAAGAGAGGTTAGC+AGG | 0.524948 | 8_1:+11135966 | None:intergenic |
| GTTTGTGGAATCTCTCCTCA+AGG | 0.525811 | 8_1:-11135724 | Msa1178420:CDS |
| GGACGTGCATCAGGAGCTCC+CGG | 0.526298 | 8_1:+11136929 | None:intergenic |
| GGTTGGTGCGAAGGATTGCT+AGG | 0.526445 | 8_1:-11135632 | Msa1178420:CDS |
| CTTAGATATAAAACACCCTA+AGG | 0.531876 | 8_1:-11136825 | Msa1178420:CDS |
| AGTGCAGAGTCACCAACAAA+AGG | 0.536032 | 8_1:-11135653 | Msa1178420:CDS |
| AACAATACCACACCATCCCC+GGG | 0.553758 | 8_1:+11136725 | None:intergenic |
| AGCGGCGCCTTCGAAAAGGC+CGG | 0.554536 | 8_1:+11135920 | None:intergenic |
| GTGGACGCTTGTTTCAGCGC+CGG | 0.555105 | 8_1:-11135939 | Msa1178420:CDS |
| TTTATGAACCTCGGGAACAA+TGG | 0.557196 | 8_1:+11135765 | None:intergenic |
| CCAACAAAAGGTTGGTGCGA+AGG | 0.564541 | 8_1:-11135641 | Msa1178420:CDS |
| TCCTGCTAACCTCTCTTGTA+CGG | 0.566296 | 8_1:-11135967 | Msa1178420:CDS |
| ACCATAGATACGAGAATCAT+CGG | 0.570225 | 8_1:+11136113 | None:intergenic |
| TAAGCAGACGTGATACAACC+TGG | 0.577441 | 8_1:+11136908 | None:intergenic |
| AGCGTAGAGTCACCCACCAA+GGG | 0.591381 | 8_1:-11135686 | Msa1178420:CDS |
| CAGAGTCACCAACAAAAGGT+TGG | 0.603892 | 8_1:-11135649 | Msa1178420:CDS |
| GTTGCATGTATATCAAATCC+GGG | 0.606506 | 8_1:-11136947 | Msa1178420:CDS |
| GATATCATCCATTGTTCCCG+AGG | 0.609122 | 8_1:-11135773 | Msa1178420:CDS |
| GATGAAAGATTCGATATAGG+GGG | 0.619536 | 8_1:-11136800 | Msa1178420:CDS |
| TTTGTAGCGACACCCAAGCA+AGG | 0.619617 | 8_1:-11135557 | Msa1178420:CDS |
| TGGTCTCCGAATCTGTACCC+GGG | 0.625032 | 8_1:-11136742 | Msa1178420:CDS |
| AAGCGTAGAGTCACCCACCA+AGG | 0.632729 | 8_1:-11135687 | Msa1178420:CDS |
| AACAATCTTCTATAGGTGAG+AGG | 0.633433 | 8_1:-11135809 | Msa1178420:CDS |
| AGATATAAAACACCCTAAGG+AGG | 0.640748 | 8_1:-11136822 | Msa1178420:CDS |
| TACAGGGCATGGAGGAACTG+TGG | 0.641620 | 8_1:-11136184 | Msa1178420:intron |
| GAGGAGAGATTCCACAAACA+AGG | 0.648421 | 8_1:+11135728 | None:intergenic |
| AGGGCATGGAGGAACTGTGG+AGG | 0.649291 | 8_1:-11136181 | Msa1178420:CDS |
| CCACAATCACCGTACAAGAG+AGG | 0.649619 | 8_1:+11135958 | None:intergenic |
| GGTCTCCGAATCTGTACCCG+GGG | 0.650650 | 8_1:-11136741 | Msa1178420:CDS |
| AATTTGTATACAGGGCATGG+AGG | 0.718727 | 8_1:-11136192 | Msa1178420:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTCTTTTTTCGAAATTTTT+AGG | - | chr8_1:11135932-11135951 | Msa1178420:CDS | 15.0% |
| !!! | CATTTTTTAGGATAAATTTT+AGG | - | chr8_1:11136130-11136149 | Msa1178420:CDS | 15.0% |
| !! | AAAAAATATTGGAAAAAGAT+GGG | - | chr8_1:11136893-11136912 | Msa1178420:CDS | 15.0% |
| !!! | ATTCTTTTTTCGAAATTTTT+AGG | - | chr8_1:11135932-11135951 | Msa1178420:CDS | 15.0% |
| !!! | CATTTTTTAGGATAAATTTT+AGG | - | chr8_1:11136130-11136149 | Msa1178420:CDS | 15.0% |
| !! | AAAAAATATTGGAAAAAGAT+GGG | - | chr8_1:11136893-11136912 | Msa1178420:CDS | 15.0% |
| !!! | AAACTTTTGATCAAAAGATA+TGG | - | chr8_1:11135620-11135639 | Msa1178420:CDS | 20.0% |
| !!! | AACTTTTGATCAAAAGATAT+GGG | - | chr8_1:11135621-11135640 | Msa1178420:CDS | 20.0% |
| !!! | TTTTAGGATAAATTTTAGGA+AGG | - | chr8_1:11136134-11136153 | Msa1178420:CDS | 20.0% |
| !!! | TTTAGGATAAATTTTAGGAA+GGG | - | chr8_1:11136135-11136154 | Msa1178420:CDS | 20.0% |
| !! | AGATTTATGAATTTGTATAC+AGG | - | chr8_1:11136294-11136313 | Msa1178420:intron | 20.0% |
| !! | GATTTATGAATTTGTATACA+GGG | - | chr8_1:11136295-11136314 | Msa1178420:intron | 20.0% |
| !!! | TTGTTCTTATCATTTTTTGA+AGG | + | chr8_1:11136507-11136526 | None:intergenic | 20.0% |
| !! | GAAAAAATATTGGAAAAAGA+TGG | - | chr8_1:11136892-11136911 | Msa1178420:CDS | 20.0% |
| !! | AAAAATATTGGAAAAAGATG+GGG | - | chr8_1:11136894-11136913 | Msa1178420:CDS | 20.0% |
| !!! | AAACTTTTGATCAAAAGATA+TGG | - | chr8_1:11135620-11135639 | Msa1178420:CDS | 20.0% |
| !!! | AACTTTTGATCAAAAGATAT+GGG | - | chr8_1:11135621-11135640 | Msa1178420:CDS | 20.0% |
| !!! | TTTTAGGATAAATTTTAGGA+AGG | - | chr8_1:11136134-11136153 | Msa1178420:CDS | 20.0% |
| !!! | TTTAGGATAAATTTTAGGAA+GGG | - | chr8_1:11136135-11136154 | Msa1178420:CDS | 20.0% |
| !! | AGATTTATGAATTTGTATAC+AGG | - | chr8_1:11136294-11136313 | Msa1178420:intron | 20.0% |
| !! | GATTTATGAATTTGTATACA+GGG | - | chr8_1:11136295-11136314 | Msa1178420:intron | 20.0% |
| !!! | TTGTTCTTATCATTTTTTGA+AGG | + | chr8_1:11136507-11136526 | None:intergenic | 20.0% |
| !! | GAAAAAATATTGGAAAAAGA+TGG | - | chr8_1:11136892-11136911 | Msa1178420:CDS | 20.0% |
| !! | AAAAATATTGGAAAAAGATG+GGG | - | chr8_1:11136894-11136913 | Msa1178420:CDS | 20.0% |
| ! | AGAACTAAAGCTAAAAGATA+TGG | - | chr8_1:11135733-11135752 | Msa1178420:CDS | 25.0% |
| !!! | TCGATTAAGCTTTAAAGAAA+CGG | + | chr8_1:11135892-11135911 | None:intergenic | 25.0% |
| ! | CGAAAAAAGAATTAAGCTAA+GGG | + | chr8_1:11135924-11135943 | None:intergenic | 25.0% |
| ! | TCGAAAAAAGAATTAAGCTA+AGG | + | chr8_1:11135925-11135944 | None:intergenic | 25.0% |
| !!! | TTTTTCGAAATTTTTAGGCA+AGG | - | chr8_1:11135937-11135956 | Msa1178420:CDS | 25.0% |
| !!! | TTTTCGAAATTTTTAGGCAA+GGG | - | chr8_1:11135938-11135957 | Msa1178420:CDS | 25.0% |
| !! | TTGTTTCACATAGTTTCTTT+TGG | - | chr8_1:11136099-11136118 | Msa1178420:intron | 25.0% |
| !! | TGTTTCACATAGTTTCTTTT+GGG | - | chr8_1:11136100-11136119 | Msa1178420:intron | 25.0% |
| !!! | TGATGAATTCTGGAAATTTT+TGG | - | chr8_1:11136193-11136212 | Msa1178420:intron | 25.0% |
| !!! | GATGAATTCTGGAAATTTTT+GGG | - | chr8_1:11136194-11136213 | Msa1178420:intron | 25.0% |
| !!! | TAGGCTTTTGGAAAAAATAT+TGG | - | chr8_1:11136882-11136901 | Msa1178420:CDS | 25.0% |
| ! | AGAACTAAAGCTAAAAGATA+TGG | - | chr8_1:11135733-11135752 | Msa1178420:CDS | 25.0% |
| !!! | TCGATTAAGCTTTAAAGAAA+CGG | + | chr8_1:11135892-11135911 | None:intergenic | 25.0% |
| ! | CGAAAAAAGAATTAAGCTAA+GGG | + | chr8_1:11135924-11135943 | None:intergenic | 25.0% |
| ! | TCGAAAAAAGAATTAAGCTA+AGG | + | chr8_1:11135925-11135944 | None:intergenic | 25.0% |
| !!! | TTTTTCGAAATTTTTAGGCA+AGG | - | chr8_1:11135937-11135956 | Msa1178420:CDS | 25.0% |
| !!! | TTTTCGAAATTTTTAGGCAA+GGG | - | chr8_1:11135938-11135957 | Msa1178420:CDS | 25.0% |
| !! | TTGTTTCACATAGTTTCTTT+TGG | - | chr8_1:11136099-11136118 | Msa1178420:intron | 25.0% |
| !! | TGTTTCACATAGTTTCTTTT+GGG | - | chr8_1:11136100-11136119 | Msa1178420:intron | 25.0% |
| !!! | TGATGAATTCTGGAAATTTT+TGG | - | chr8_1:11136193-11136212 | Msa1178420:intron | 25.0% |
| !!! | GATGAATTCTGGAAATTTTT+GGG | - | chr8_1:11136194-11136213 | Msa1178420:intron | 25.0% |
| !!! | TAGGCTTTTGGAAAAAATAT+TGG | - | chr8_1:11136882-11136901 | Msa1178420:CDS | 25.0% |
| AGTTGCATGTATATCAAATC+CGG | - | chr8_1:11135547-11135566 | Msa1178420:CDS | 30.0% | |
| AGATTAAGCTGATATGTTTG+CGG | + | chr8_1:11135652-11135671 | None:intergenic | 30.0% | |
| CTTAGATATAAAACACCCTA+AGG | - | chr8_1:11135670-11135689 | Msa1178420:CDS | 30.0% | |
| AGGATGAAAGATTCGATATA+GGG | - | chr8_1:11135693-11135712 | Msa1178420:CDS | 30.0% | |
| AAAAGAATTAAGCTAAGGGA+CGG | + | chr8_1:11135920-11135939 | None:intergenic | 30.0% | |
| !! | TTTCGAAATTTTTAGGCAAG+GGG | - | chr8_1:11135939-11135958 | Msa1178420:CDS | 30.0% |
| ! | GGTTTTCTGTTTATTCACAA+AGG | - | chr8_1:11136033-11136052 | Msa1178420:intron | 30.0% |
| !!! | TTGGGTGCTATTCATTTTTT+AGG | - | chr8_1:11136118-11136137 | Msa1178420:CDS | 30.0% |
| !!! | ATTTTTGGGTCAACAAATTC+TGG | - | chr8_1:11136208-11136227 | Msa1178420:intron | 30.0% |
| GAATTCAAGTGATTACTACT+TGG | - | chr8_1:11136353-11136372 | Msa1178420:intron | 30.0% | |
| TGCAACAAACAATCTTCTAT+AGG | - | chr8_1:11136679-11136698 | Msa1178420:intron | 30.0% | |
| AGTTGCATGTATATCAAATC+CGG | - | chr8_1:11135547-11135566 | Msa1178420:CDS | 30.0% | |
| AGATTAAGCTGATATGTTTG+CGG | + | chr8_1:11135652-11135671 | None:intergenic | 30.0% | |
| CTTAGATATAAAACACCCTA+AGG | - | chr8_1:11135670-11135689 | Msa1178420:CDS | 30.0% | |
| AGGATGAAAGATTCGATATA+GGG | - | chr8_1:11135693-11135712 | Msa1178420:CDS | 30.0% | |
| AAAAGAATTAAGCTAAGGGA+CGG | + | chr8_1:11135920-11135939 | None:intergenic | 30.0% | |
| !! | TTTCGAAATTTTTAGGCAAG+GGG | - | chr8_1:11135939-11135958 | Msa1178420:CDS | 30.0% |
| ! | GGTTTTCTGTTTATTCACAA+AGG | - | chr8_1:11136033-11136052 | Msa1178420:intron | 30.0% |
| !!! | TTGGGTGCTATTCATTTTTT+AGG | - | chr8_1:11136118-11136137 | Msa1178420:CDS | 30.0% |
| !!! | ATTTTTGGGTCAACAAATTC+TGG | - | chr8_1:11136208-11136227 | Msa1178420:intron | 30.0% |
| GAATTCAAGTGATTACTACT+TGG | - | chr8_1:11136353-11136372 | Msa1178420:intron | 30.0% | |
| TGCAACAAACAATCTTCTAT+AGG | - | chr8_1:11136679-11136698 | Msa1178420:intron | 30.0% | |
| GTTGCATGTATATCAAATCC+GGG | - | chr8_1:11135548-11135567 | Msa1178420:CDS | 35.0% | |
| AGATATAAAACACCCTAAGG+AGG | - | chr8_1:11135673-11135692 | Msa1178420:CDS | 35.0% | |
| GAGGATGAAAGATTCGATAT+AGG | - | chr8_1:11135692-11135711 | Msa1178420:CDS | 35.0% | |
| GGATGAAAGATTCGATATAG+GGG | - | chr8_1:11135694-11135713 | Msa1178420:CDS | 35.0% | |
| GATGAAAGATTCGATATAGG+GGG | - | chr8_1:11135695-11135714 | Msa1178420:CDS | 35.0% | |
| !!! | GGTATTGTTTTTGACAGGTA+TGG | - | chr8_1:11135784-11135803 | Msa1178420:CDS | 35.0% |
| AAAGAATTAAGCTAAGGGAC+GGG | + | chr8_1:11135919-11135938 | None:intergenic | 35.0% | |
| TCTGTTTATTCACAAAGGTC+TGG | - | chr8_1:11136038-11136057 | Msa1178420:intron | 35.0% | |
| CTGTTTATTCACAAAGGTCT+GGG | - | chr8_1:11136039-11136058 | Msa1178420:intron | 35.0% | |
| !! | AGGATAAATTTTAGGAAGGG+TGG | - | chr8_1:11136138-11136157 | Msa1178420:CDS | 35.0% |
| ! | ATGAAGATGGTGATGAATTC+TGG | - | chr8_1:11136183-11136202 | Msa1178420:intron | 35.0% |
| ATGAATTTGTATACAGGGCA+TGG | - | chr8_1:11136300-11136319 | Msa1178420:intron | 35.0% | |
| ACCATAGATACGAGAATCAT+CGG | + | chr8_1:11136385-11136404 | None:intergenic | 35.0% | |
| ! | ACGATATGACTTGTAGAGTT+GGG | + | chr8_1:11136616-11136635 | None:intergenic | 35.0% |
| AACAATCTTCTATAGGTGAG+AGG | - | chr8_1:11136686-11136705 | Msa1178420:intron | 35.0% | |
| ! | GCTTTCTTTTTATGAACCTC+GGG | + | chr8_1:11136741-11136760 | None:intergenic | 35.0% |
| ! | CGCTTTCTTTTTATGAACCT+CGG | + | chr8_1:11136742-11136761 | None:intergenic | 35.0% |
| AGGTTCATAAAAAGAAAGCG+TGG | - | chr8_1:11136742-11136761 | Msa1178420:CDS | 35.0% | |
| GTTGCATGTATATCAAATCC+GGG | - | chr8_1:11135548-11135567 | Msa1178420:CDS | 35.0% | |
| AGATATAAAACACCCTAAGG+AGG | - | chr8_1:11135673-11135692 | Msa1178420:CDS | 35.0% | |
| GAGGATGAAAGATTCGATAT+AGG | - | chr8_1:11135692-11135711 | Msa1178420:CDS | 35.0% | |
| GGATGAAAGATTCGATATAG+GGG | - | chr8_1:11135694-11135713 | Msa1178420:CDS | 35.0% | |
| GATGAAAGATTCGATATAGG+GGG | - | chr8_1:11135695-11135714 | Msa1178420:CDS | 35.0% | |
| !!! | GGTATTGTTTTTGACAGGTA+TGG | - | chr8_1:11135784-11135803 | Msa1178420:CDS | 35.0% |
| AAAGAATTAAGCTAAGGGAC+GGG | + | chr8_1:11135919-11135938 | None:intergenic | 35.0% | |
| TCTGTTTATTCACAAAGGTC+TGG | - | chr8_1:11136038-11136057 | Msa1178420:intron | 35.0% | |
| CTGTTTATTCACAAAGGTCT+GGG | - | chr8_1:11136039-11136058 | Msa1178420:intron | 35.0% | |
| !! | AGGATAAATTTTAGGAAGGG+TGG | - | chr8_1:11136138-11136157 | Msa1178420:CDS | 35.0% |
| ! | ATGAAGATGGTGATGAATTC+TGG | - | chr8_1:11136183-11136202 | Msa1178420:intron | 35.0% |
| ATGAATTTGTATACAGGGCA+TGG | - | chr8_1:11136300-11136319 | Msa1178420:intron | 35.0% | |
| ACCATAGATACGAGAATCAT+CGG | + | chr8_1:11136385-11136404 | None:intergenic | 35.0% | |
| ! | ACGATATGACTTGTAGAGTT+GGG | + | chr8_1:11136616-11136635 | None:intergenic | 35.0% |
| AACAATCTTCTATAGGTGAG+AGG | - | chr8_1:11136686-11136705 | Msa1178420:intron | 35.0% | |
| ! | GCTTTCTTTTTATGAACCTC+GGG | + | chr8_1:11136741-11136760 | None:intergenic | 35.0% |
| ! | CGCTTTCTTTTTATGAACCT+CGG | + | chr8_1:11136742-11136761 | None:intergenic | 35.0% |
| AGGTTCATAAAAAGAAAGCG+TGG | - | chr8_1:11136742-11136761 | Msa1178420:CDS | 35.0% | |
| CGAATCTTTCATCCTCCTTA+GGG | + | chr8_1:11135688-11135707 | None:intergenic | 40.0% | |
| TCGAATCTTTCATCCTCCTT+AGG | + | chr8_1:11135689-11135708 | None:intergenic | 40.0% | |
| !!! | GGTGTGGTATTGTTTTTGAC+AGG | - | chr8_1:11135779-11135798 | Msa1178420:CDS | 40.0% |
| AATTTGTATACAGGGCATGG+AGG | - | chr8_1:11136303-11136322 | Msa1178420:intron | 40.0% | |
| ACCGATGATTCTCGTATCTA+TGG | - | chr8_1:11136381-11136400 | Msa1178420:intron | 40.0% | |
| ! | GACGATATGACTTGTAGAGT+TGG | + | chr8_1:11136617-11136636 | None:intergenic | 40.0% |
| GACGCTATCATTACTGCATT+AGG | + | chr8_1:11136655-11136674 | None:intergenic | 40.0% | |
| ! | AGAAGATTGTTTGTTGCAGC+AGG | + | chr8_1:11136677-11136696 | None:intergenic | 40.0% |
| TCTATAGGTGAGAGGTTCAA+TGG | - | chr8_1:11136694-11136713 | Msa1178420:intron | 40.0% | |
| TTTATGAACCTCGGGAACAA+TGG | + | chr8_1:11136733-11136752 | None:intergenic | 40.0% | |
| ! | TTCTCCTTTTAACAGCCTTG+AGG | + | chr8_1:11136789-11136808 | None:intergenic | 40.0% |
| !! | ACAAAAAAGTGCCGGTTGTT+GGG | + | chr8_1:11136923-11136942 | None:intergenic | 40.0% |
| !! | TACAAAAAAGTGCCGGTTGT+TGG | + | chr8_1:11136924-11136943 | None:intergenic | 40.0% |
| CGAATCTTTCATCCTCCTTA+GGG | + | chr8_1:11135688-11135707 | None:intergenic | 40.0% | |
| TCGAATCTTTCATCCTCCTT+AGG | + | chr8_1:11135689-11135708 | None:intergenic | 40.0% | |
| !!! | GGTGTGGTATTGTTTTTGAC+AGG | - | chr8_1:11135779-11135798 | Msa1178420:CDS | 40.0% |
| AATTTGTATACAGGGCATGG+AGG | - | chr8_1:11136303-11136322 | Msa1178420:intron | 40.0% | |
| ACCGATGATTCTCGTATCTA+TGG | - | chr8_1:11136381-11136400 | Msa1178420:intron | 40.0% | |
| ! | GACGATATGACTTGTAGAGT+TGG | + | chr8_1:11136617-11136636 | None:intergenic | 40.0% |
| GACGCTATCATTACTGCATT+AGG | + | chr8_1:11136655-11136674 | None:intergenic | 40.0% | |
| ! | AGAAGATTGTTTGTTGCAGC+AGG | + | chr8_1:11136677-11136696 | None:intergenic | 40.0% |
| TCTATAGGTGAGAGGTTCAA+TGG | - | chr8_1:11136694-11136713 | Msa1178420:intron | 40.0% | |
| TTTATGAACCTCGGGAACAA+TGG | + | chr8_1:11136733-11136752 | None:intergenic | 40.0% | |
| ! | TTCTCCTTTTAACAGCCTTG+AGG | + | chr8_1:11136789-11136808 | None:intergenic | 40.0% |
| !! | ACAAAAAAGTGCCGGTTGTT+GGG | + | chr8_1:11136923-11136942 | None:intergenic | 40.0% |
| !! | TACAAAAAAGTGCCGGTTGT+TGG | + | chr8_1:11136924-11136943 | None:intergenic | 40.0% |
| TAAGCAGACGTGATACAACC+TGG | + | chr8_1:11135590-11135609 | None:intergenic | 45.0% | |
| AAACAATACCACACCATCCC+CGG | + | chr8_1:11135774-11135793 | None:intergenic | 45.0% | |
| !! | GGGGATTTTGCTGTGTTGTA+TGG | - | chr8_1:11135958-11135977 | Msa1178420:CDS | 45.0% |
| TGCTGTGTTGTATGGTGTGA+TGG | - | chr8_1:11135966-11135985 | Msa1178420:CDS | 45.0% | |
| TATGGTGTGATGGTCACTAG+TGG | - | chr8_1:11135976-11135995 | Msa1178420:CDS | 45.0% | |
| ! | GTATTGTCTCATGGTCTTGC+TGG | - | chr8_1:11136006-11136025 | Msa1178420:intron | 45.0% |
| !! | TCTCATGGTCTTGCTGGTTT+CGG | - | chr8_1:11136012-11136031 | Msa1178420:intron | 45.0% |
| ! | CGGTGTTGGAAAGATGAAGA+TGG | - | chr8_1:11136170-11136189 | Msa1178420:CDS | 45.0% |
| TATCACATCTCCTTTGCTGC+AGG | - | chr8_1:11136475-11136494 | Msa1178420:intron | 45.0% | |
| TCCTGCTAACCTCTCTTGTA+CGG | - | chr8_1:11136528-11136547 | Msa1178420:intron | 45.0% | |
| ! | GGGACCAATTTGTTCCTTAG+CGG | + | chr8_1:11136596-11136615 | None:intergenic | 45.0% |
| ! | GGTGAGAGGTTCAATGGATT+TGG | - | chr8_1:11136700-11136719 | Msa1178420:intron | 45.0% |
| GATATCATCCATTGTTCCCG+AGG | - | chr8_1:11136722-11136741 | Msa1178420:CDS | 45.0% | |
| GAGGAGAGATTCCACAAACA+AGG | + | chr8_1:11136770-11136789 | None:intergenic | 45.0% | |
| GTTTGTGGAATCTCTCCTCA+AGG | - | chr8_1:11136771-11136790 | Msa1178420:CDS | 45.0% | |
| CTCTCCTCAAGGCTGTTAAA+AGG | - | chr8_1:11136782-11136801 | Msa1178420:CDS | 45.0% | |
| CTTTCTCTTCTTCCCTTGGT+GGG | + | chr8_1:11136824-11136843 | None:intergenic | 45.0% | |
| ACTTTCTCTTCTTCCCTTGG+TGG | + | chr8_1:11136825-11136844 | None:intergenic | 45.0% | |
| TGCACTTTCTCTTCTTCCCT+TGG | + | chr8_1:11136828-11136847 | None:intergenic | 45.0% | |
| AGTGCAGAGTCACCAACAAA+AGG | - | chr8_1:11136842-11136861 | Msa1178420:CDS | 45.0% | |
| CAGAGTCACCAACAAAAGGT+TGG | - | chr8_1:11136846-11136865 | Msa1178420:CDS | 45.0% | |
| ! | GTGTCGCTACAAAAAAGTGC+CGG | + | chr8_1:11136931-11136950 | None:intergenic | 45.0% |
| TAGAAAGTCCAGCCTTGCTT+GGG | + | chr8_1:11136953-11136972 | None:intergenic | 45.0% | |
| TAAGCAGACGTGATACAACC+TGG | + | chr8_1:11135590-11135609 | None:intergenic | 45.0% | |
| AAACAATACCACACCATCCC+CGG | + | chr8_1:11135774-11135793 | None:intergenic | 45.0% | |
| !! | GGGGATTTTGCTGTGTTGTA+TGG | - | chr8_1:11135958-11135977 | Msa1178420:CDS | 45.0% |
| TGCTGTGTTGTATGGTGTGA+TGG | - | chr8_1:11135966-11135985 | Msa1178420:CDS | 45.0% | |
| TATGGTGTGATGGTCACTAG+TGG | - | chr8_1:11135976-11135995 | Msa1178420:CDS | 45.0% | |
| ! | GTATTGTCTCATGGTCTTGC+TGG | - | chr8_1:11136006-11136025 | Msa1178420:intron | 45.0% |
| !! | TCTCATGGTCTTGCTGGTTT+CGG | - | chr8_1:11136012-11136031 | Msa1178420:intron | 45.0% |
| ! | CGGTGTTGGAAAGATGAAGA+TGG | - | chr8_1:11136170-11136189 | Msa1178420:CDS | 45.0% |
| TATCACATCTCCTTTGCTGC+AGG | - | chr8_1:11136475-11136494 | Msa1178420:intron | 45.0% | |
| TCCTGCTAACCTCTCTTGTA+CGG | - | chr8_1:11136528-11136547 | Msa1178420:intron | 45.0% | |
| ! | GGGACCAATTTGTTCCTTAG+CGG | + | chr8_1:11136596-11136615 | None:intergenic | 45.0% |
| ! | GGTGAGAGGTTCAATGGATT+TGG | - | chr8_1:11136700-11136719 | Msa1178420:intron | 45.0% |
| GATATCATCCATTGTTCCCG+AGG | - | chr8_1:11136722-11136741 | Msa1178420:CDS | 45.0% | |
| GAGGAGAGATTCCACAAACA+AGG | + | chr8_1:11136770-11136789 | None:intergenic | 45.0% | |
| GTTTGTGGAATCTCTCCTCA+AGG | - | chr8_1:11136771-11136790 | Msa1178420:CDS | 45.0% | |
| CTCTCCTCAAGGCTGTTAAA+AGG | - | chr8_1:11136782-11136801 | Msa1178420:CDS | 45.0% | |
| CTTTCTCTTCTTCCCTTGGT+GGG | + | chr8_1:11136824-11136843 | None:intergenic | 45.0% | |
| ACTTTCTCTTCTTCCCTTGG+TGG | + | chr8_1:11136825-11136844 | None:intergenic | 45.0% | |
| TGCACTTTCTCTTCTTCCCT+TGG | + | chr8_1:11136828-11136847 | None:intergenic | 45.0% | |
| AGTGCAGAGTCACCAACAAA+AGG | - | chr8_1:11136842-11136861 | Msa1178420:CDS | 45.0% | |
| CAGAGTCACCAACAAAAGGT+TGG | - | chr8_1:11136846-11136865 | Msa1178420:CDS | 45.0% | |
| ! | GTGTCGCTACAAAAAAGTGC+CGG | + | chr8_1:11136931-11136950 | None:intergenic | 45.0% |
| TAGAAAGTCCAGCCTTGCTT+GGG | + | chr8_1:11136953-11136972 | None:intergenic | 45.0% | |
| ATACAACCTGGACGTGCATC+AGG | + | chr8_1:11135578-11135597 | None:intergenic | 50.0% | |
| CGATATAGGGGGAACTTCTG+AGG | - | chr8_1:11135706-11135725 | Msa1178420:CDS | 50.0% | |
| ATGGTCTCCGAATCTGTACC+CGG | - | chr8_1:11135752-11135771 | Msa1178420:CDS | 50.0% | |
| AACAATACCACACCATCCCC+GGG | + | chr8_1:11135773-11135792 | None:intergenic | 50.0% | |
| GTGTGATGGTCACTAGTGGT+GGG | - | chr8_1:11135980-11135999 | Msa1178420:CDS | 50.0% | |
| ! | GGTGGGAGTGTATTGTCTCA+TGG | - | chr8_1:11135997-11136016 | Msa1178420:CDS | 50.0% |
| AGGAAGGGTGGTGAAGATGA+CGG | - | chr8_1:11136150-11136169 | Msa1178420:CDS | 50.0% | |
| AAGGTCTGAACCTGCAGCAA+AGG | + | chr8_1:11136488-11136507 | None:intergenic | 50.0% | |
| ACCGTACAAGAGAGGTTAGC+AGG | + | chr8_1:11136532-11136551 | None:intergenic | 50.0% | |
| CCACAATCACCGTACAAGAG+AGG | + | chr8_1:11136540-11136559 | None:intergenic | 50.0% | |
| CCTCTCTTGTACGGTGATTG+TGG | - | chr8_1:11136537-11136556 | Msa1178420:intron | 50.0% | |
| ! | AAAGCGTGGCACCTTGTTTG+TGG | - | chr8_1:11136756-11136775 | Msa1178420:CDS | 50.0% |
| ! | CCTTCGCACCAACCTTTTGT+TGG | + | chr8_1:11136857-11136876 | None:intergenic | 50.0% |
| !! | CCAACAAAAGGTTGGTGCGA+AGG | - | chr8_1:11136854-11136873 | Msa1178420:CDS | 50.0% |
| ! | GCGAAGGATTGCTAGGCTTT+TGG | - | chr8_1:11136870-11136889 | Msa1178420:CDS | 50.0% |
| AGATGGGGAAACCCAACAAC+CGG | - | chr8_1:11136909-11136928 | Msa1178420:CDS | 50.0% | |
| TTTGTAGCGACACCCAAGCA+AGG | - | chr8_1:11136938-11136957 | Msa1178420:CDS | 50.0% | |
| CTAGAAAGTCCAGCCTTGCT+TGG | + | chr8_1:11136954-11136973 | None:intergenic | 50.0% | |
| CAAGCAAGGCTGGACTTTCT+AGG | - | chr8_1:11136952-11136971 | Msa1178420:CDS | 50.0% | |
| ATACAACCTGGACGTGCATC+AGG | + | chr8_1:11135578-11135597 | None:intergenic | 50.0% | |
| CGATATAGGGGGAACTTCTG+AGG | - | chr8_1:11135706-11135725 | Msa1178420:CDS | 50.0% | |
| ATGGTCTCCGAATCTGTACC+CGG | - | chr8_1:11135752-11135771 | Msa1178420:CDS | 50.0% | |
| AACAATACCACACCATCCCC+GGG | + | chr8_1:11135773-11135792 | None:intergenic | 50.0% | |
| GTGTGATGGTCACTAGTGGT+GGG | - | chr8_1:11135980-11135999 | Msa1178420:CDS | 50.0% | |
| ! | GGTGGGAGTGTATTGTCTCA+TGG | - | chr8_1:11135997-11136016 | Msa1178420:CDS | 50.0% |
| AGGAAGGGTGGTGAAGATGA+CGG | - | chr8_1:11136150-11136169 | Msa1178420:CDS | 50.0% | |
| AAGGTCTGAACCTGCAGCAA+AGG | + | chr8_1:11136488-11136507 | None:intergenic | 50.0% | |
| ACCGTACAAGAGAGGTTAGC+AGG | + | chr8_1:11136532-11136551 | None:intergenic | 50.0% | |
| CCACAATCACCGTACAAGAG+AGG | + | chr8_1:11136540-11136559 | None:intergenic | 50.0% | |
| CCTCTCTTGTACGGTGATTG+TGG | - | chr8_1:11136537-11136556 | Msa1178420:intron | 50.0% | |
| ! | AAAGCGTGGCACCTTGTTTG+TGG | - | chr8_1:11136756-11136775 | Msa1178420:CDS | 50.0% |
| ! | CCTTCGCACCAACCTTTTGT+TGG | + | chr8_1:11136857-11136876 | None:intergenic | 50.0% |
| !! | CCAACAAAAGGTTGGTGCGA+AGG | - | chr8_1:11136854-11136873 | Msa1178420:CDS | 50.0% |
| ! | GCGAAGGATTGCTAGGCTTT+TGG | - | chr8_1:11136870-11136889 | Msa1178420:CDS | 50.0% |
| AGATGGGGAAACCCAACAAC+CGG | - | chr8_1:11136909-11136928 | Msa1178420:CDS | 50.0% | |
| TTTGTAGCGACACCCAAGCA+AGG | - | chr8_1:11136938-11136957 | Msa1178420:CDS | 50.0% | |
| CTAGAAAGTCCAGCCTTGCT+TGG | + | chr8_1:11136954-11136973 | None:intergenic | 50.0% | |
| CAAGCAAGGCTGGACTTTCT+AGG | - | chr8_1:11136952-11136971 | Msa1178420:CDS | 50.0% | |
| TGGTCTCCGAATCTGTACCC+GGG | - | chr8_1:11135753-11135772 | Msa1178420:CDS | 55.0% | |
| ACCATCCCCGGGTACAGATT+CGG | + | chr8_1:11135762-11135781 | None:intergenic | 55.0% | |
| GGTGTGATGGTCACTAGTGG+TGG | - | chr8_1:11135979-11135998 | Msa1178420:CDS | 55.0% | |
| ! | GGTGGTGAAGATGACGGTGT+TGG | - | chr8_1:11136156-11136175 | Msa1178420:CDS | 55.0% |
| TACAGGGCATGGAGGAACTG+TGG | - | chr8_1:11136311-11136330 | Msa1178420:intron | 55.0% | |
| GGCGCCGCTAAGGAACAAAT+TGG | - | chr8_1:11136589-11136608 | Msa1178420:intron | 55.0% | |
| AAGCGTAGAGTCACCCACCA+AGG | - | chr8_1:11136808-11136827 | Msa1178420:CDS | 55.0% | |
| AGCGTAGAGTCACCCACCAA+GGG | - | chr8_1:11136809-11136828 | Msa1178420:CDS | 55.0% | |
| ! | GGTTGGTGCGAAGGATTGCT+AGG | - | chr8_1:11136863-11136882 | Msa1178420:CDS | 55.0% |
| TGGTCTCCGAATCTGTACCC+GGG | - | chr8_1:11135753-11135772 | Msa1178420:CDS | 55.0% | |
| ACCATCCCCGGGTACAGATT+CGG | + | chr8_1:11135762-11135781 | None:intergenic | 55.0% | |
| GGTGTGATGGTCACTAGTGG+TGG | - | chr8_1:11135979-11135998 | Msa1178420:CDS | 55.0% | |
| ! | GGTGGTGAAGATGACGGTGT+TGG | - | chr8_1:11136156-11136175 | Msa1178420:CDS | 55.0% |
| TACAGGGCATGGAGGAACTG+TGG | - | chr8_1:11136311-11136330 | Msa1178420:intron | 55.0% | |
| GGCGCCGCTAAGGAACAAAT+TGG | - | chr8_1:11136589-11136608 | Msa1178420:intron | 55.0% | |
| AAGCGTAGAGTCACCCACCA+AGG | - | chr8_1:11136808-11136827 | Msa1178420:CDS | 55.0% | |
| AGCGTAGAGTCACCCACCAA+GGG | - | chr8_1:11136809-11136828 | Msa1178420:CDS | 55.0% | |
| ! | GGTTGGTGCGAAGGATTGCT+AGG | - | chr8_1:11136863-11136882 | Msa1178420:CDS | 55.0% |
| GGTCTCCGAATCTGTACCCG+GGG | - | chr8_1:11135754-11135773 | Msa1178420:CDS | 60.0% | |
| TCCGAATCTGTACCCGGGGA+TGG | - | chr8_1:11135758-11135777 | Msa1178420:CDS | 60.0% | |
| ATCTGTACCCGGGGATGGTG+TGG | - | chr8_1:11135763-11135782 | Msa1178420:CDS | 60.0% | |
| AGGGCATGGAGGAACTGTGG+AGG | - | chr8_1:11136314-11136333 | Msa1178420:intron | 60.0% | |
| GCATGGAGGAACTGTGGAGG+AGG | - | chr8_1:11136317-11136336 | Msa1178420:intron | 60.0% | |
| GTGGACGCTTGTTTCAGCGC+CGG | - | chr8_1:11136556-11136575 | Msa1178420:intron | 60.0% | |
| !!! | TTCAGCGCCGGCCTTTTCGA+AGG | - | chr8_1:11136568-11136587 | Msa1178420:intron | 60.0% |
| CCTTAGCGGCGCCTTCGAAA+AGG | + | chr8_1:11136582-11136601 | None:intergenic | 60.0% | |
| !!! | CCTTTTCGAAGGCGCCGCTA+AGG | - | chr8_1:11136579-11136598 | Msa1178420:intron | 60.0% |
| TAGCGACACCCAAGCAAGGC+TGG | - | chr8_1:11136942-11136961 | Msa1178420:CDS | 60.0% | |
| GGTCTCCGAATCTGTACCCG+GGG | - | chr8_1:11135754-11135773 | Msa1178420:CDS | 60.0% | |
| TCCGAATCTGTACCCGGGGA+TGG | - | chr8_1:11135758-11135777 | Msa1178420:CDS | 60.0% | |
| ATCTGTACCCGGGGATGGTG+TGG | - | chr8_1:11135763-11135782 | Msa1178420:CDS | 60.0% | |
| AGGGCATGGAGGAACTGTGG+AGG | - | chr8_1:11136314-11136333 | Msa1178420:intron | 60.0% | |
| GCATGGAGGAACTGTGGAGG+AGG | - | chr8_1:11136317-11136336 | Msa1178420:intron | 60.0% | |
| GTGGACGCTTGTTTCAGCGC+CGG | - | chr8_1:11136556-11136575 | Msa1178420:intron | 60.0% | |
| !!! | TTCAGCGCCGGCCTTTTCGA+AGG | - | chr8_1:11136568-11136587 | Msa1178420:intron | 60.0% |
| CCTTAGCGGCGCCTTCGAAA+AGG | + | chr8_1:11136582-11136601 | None:intergenic | 60.0% | |
| !!! | CCTTTTCGAAGGCGCCGCTA+AGG | - | chr8_1:11136579-11136598 | Msa1178420:intron | 60.0% |
| TAGCGACACCCAAGCAAGGC+TGG | - | chr8_1:11136942-11136961 | Msa1178420:CDS | 60.0% | |
| GGACGTGCATCAGGAGCTCC+CGG | + | chr8_1:11135569-11135588 | None:intergenic | 65.0% | |
| GGAGCTCCTGATGCACGTCC+AGG | - | chr8_1:11135569-11135588 | Msa1178420:CDS | 65.0% | |
| AGCGGCGCCTTCGAAAAGGC+CGG | + | chr8_1:11136578-11136597 | None:intergenic | 65.0% | |
| GGACGTGCATCAGGAGCTCC+CGG | + | chr8_1:11135569-11135588 | None:intergenic | 65.0% | |
| GGAGCTCCTGATGCACGTCC+AGG | - | chr8_1:11135569-11135588 | Msa1178420:CDS | 65.0% | |
| AGCGGCGCCTTCGAAAAGGC+CGG | + | chr8_1:11136578-11136597 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 11135530 | 11136987 | 11135530 | ID=Msa1178420;Name=Msa1178420 |
| chr8_1 | mRNA | 11135530 | 11136987 | 11135530 | ID=Msa1178420-mRNA-1;Parent=Msa1178420;Name=Msa1178420-mRNA-1;_AED=0.64;_eAED=0.64;_QI=0|0|0|0.33|1|1|3|0|282 |
| chr8_1 | exon | 11136717 | 11136987 | 11136717 | ID=Msa1178420-mRNA-1:exon:3974;Parent=Msa1178420-mRNA-1 |
| chr8_1 | exon | 11136115 | 11136201 | 11136115 | ID=Msa1178420-mRNA-1:exon:3973;Parent=Msa1178420-mRNA-1 |
| chr8_1 | exon | 11135530 | 11136020 | 11135530 | ID=Msa1178420-mRNA-1:exon:3972;Parent=Msa1178420-mRNA-1 |
| chr8_1 | CDS | 11136717 | 11136987 | 11136717 | ID=Msa1178420-mRNA-1:cds;Parent=Msa1178420-mRNA-1 |
| chr8_1 | CDS | 11136115 | 11136201 | 11136115 | ID=Msa1178420-mRNA-1:cds;Parent=Msa1178420-mRNA-1 |
| chr8_1 | CDS | 11135530 | 11136020 | 11135530 | ID=Msa1178420-mRNA-1:cds;Parent=Msa1178420-mRNA-1 |
| Gene Sequence |
| Protein sequence |
