Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1313410 | sp|Q6XPT5|MCA7_ARATH | 28.313 | 166 | 108 | 5 | 1 | 163 | 1 | 158 | 5.38e-15 | 77.8 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1313410 | A0A072TET9 | 26.490 | 302 | 168 | 10 | 3 | 279 | 4 | 276 | 7.77e-20 | 97.1 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0758760 | Msa1313410 | 0.803508 | 3.370667e-49 | -8.615850e-47 |
| Msa1232620 | Msa1313410 | 0.977229 | 2.294121e-143 | -8.615850e-47 |
| Msa1232790 | Msa1313410 | 0.982695 | 9.304086e-156 | -8.615850e-47 |
| Msa1313340 | Msa1313410 | 0.959952 | 5.177634e-118 | -8.615850e-47 |
| Msa0434180 | Msa1313410 | 0.800246 | 1.576640e-48 | -8.615850e-47 |
| Msa1178420 | Msa1313410 | 0.979752 | 1.154692e-148 | -8.615850e-47 |
| Msa0864070 | Msa1313410 | 0.800624 | 1.320437e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1313410 | MtrunA17_Chr8g0356911 | 26.490 | 302 | 168 | 10 | 3 | 279 | 4 | 276 | 1.50e-23 | 97.1 |
| Msa1313410 | MtrunA17_Chr2g0309701 | 27.660 | 235 | 146 | 8 | 1 | 223 | 4 | 226 | 1.14e-17 | 82.4 |
| Msa1313410 | MtrunA17_Chr1g0175941 | 24.296 | 284 | 167 | 7 | 17 | 279 | 32 | 288 | 2.89e-17 | 81.6 |
| Msa1313410 | MtrunA17_Chr8g0356311 | 28.659 | 164 | 106 | 4 | 1 | 161 | 1 | 156 | 7.51e-15 | 73.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1313410 | AT1G79310.1 | 28.313 | 166 | 108 | 5 | 1 | 163 | 1 | 158 | 5.47e-16 | 77.8 |
| Msa1313410 | AT1G79340.1 | 29.268 | 164 | 105 | 4 | 1 | 161 | 1 | 156 | 3.08e-15 | 75.5 |
| Msa1313410 | AT1G79330.1 | 28.049 | 164 | 107 | 4 | 1 | 161 | 1 | 156 | 1.81e-14 | 73.2 |
| Msa1313410 | AT1G79320.1 | 28.659 | 164 | 106 | 4 | 1 | 161 | 1 | 156 | 1.41e-13 | 70.5 |
Find 71 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGATGAAAGATTCGATATA+GGG | 0.266282 | 8_4:-11348915 | Msa1313410:CDS |
| GCGAAGGATTGCTAGGCTTT+TGG | 0.269483 | 8_4:-11347738 | Msa1313410:CDS |
| GGTGAGAGGTTCAATGGATT+TGG | 0.295447 | 8_4:-11347908 | Msa1313410:CDS |
| TGCACTTTCTCTTCTTCCCT+TGG | 0.325486 | 8_4:+11347783 | None:intergenic |
| CTCTCCTCAAGGCTGTTAAA+AGG | 0.327370 | 8_4:-11347826 | Msa1313410:CDS |
| GAGGATGAAAGATTCGATAT+AGG | 0.329537 | 8_4:-11348916 | Msa1313410:CDS |
| TCGAATCTTTCATCCTCCTT+AGG | 0.336446 | 8_4:+11348922 | None:intergenic |
| CAAGCAAGGCTGGACTTTCT+AGG | 0.356897 | 8_4:-11347656 | Msa1313410:CDS |
| ACCGATGATTCTCGTATCTA+TGG | 0.370000 | 8_4:-11348227 | Msa1313410:intron |
| AGAACTAAAGCTAAAAGATA+TGG | 0.401543 | 8_4:-11348875 | Msa1313410:CDS |
| CTTTCTCTTCTTCCCTTGGT+GGG | 0.408662 | 8_4:+11347787 | None:intergenic |
| CGAATCTTTCATCCTCCTTA+GGG | 0.417346 | 8_4:+11348923 | None:intergenic |
| AGAAGATTGTTTGTTGCAGC+AGG | 0.433609 | 8_4:+11347934 | None:intergenic |
| TGAAGCACTTACTATGCAAT+TGG | 0.434616 | 8_4:+11347632 | None:intergenic |
| GGCGCCGCTAAGGAACAAAT+TGG | 0.441061 | 8_4:-11348019 | Msa1313410:CDS |
| AGTTGCATGTATATCAAATC+CGG | 0.442599 | 8_4:-11349061 | Msa1313410:CDS |
| ACTTTCTCTTCTTCCCTTGG+TGG | 0.444200 | 8_4:+11347786 | None:intergenic |
| GGAGCTCCTGATGCACGTCC+AGG | 0.447425 | 8_4:-11349039 | Msa1313410:CDS |
| TCTATAGGTGAGAGGTTCAA+TGG | 0.447603 | 8_4:-11347914 | Msa1313410:CDS |
| AAAGCGTGGCACCTTGTTTG+TGG | 0.447697 | 8_4:-11347852 | Msa1313410:CDS |
| TGCAACAAACAATCTTCTAT+AGG | 0.464135 | 8_4:-11347929 | Msa1313410:CDS |
| CTAGAAAGTCCAGCCTTGCT+TGG | 0.464626 | 8_4:+11347657 | None:intergenic |
| AGATGGGGAAACCCAACAAC+CGG | 0.467871 | 8_4:-11347699 | Msa1313410:CDS |
| ACCATCCCCGGGTACAGATT+CGG | 0.474186 | 8_4:+11348849 | None:intergenic |
| ATACAACCTGGACGTGCATC+AGG | 0.474598 | 8_4:+11349033 | None:intergenic |
| AAACAATACCACACCATCCC+CGG | 0.480304 | 8_4:+11348837 | None:intergenic |
| AGATTAAGCTGATATGTTTG+CGG | 0.481248 | 8_4:+11348959 | None:intergenic |
| ACGATATGACTTGTAGAGTT+GGG | 0.481724 | 8_4:+11347995 | None:intergenic |
| GACGCTATCATTACTGCATT+AGG | 0.482601 | 8_4:+11347956 | None:intergenic |
| CCTTAGCGGCGCCTTCGAAA+AGG | 0.483351 | 8_4:+11348029 | None:intergenic |
| GCATGGAGGAACTGTGGAGG+AGG | 0.484418 | 8_4:-11348291 | Msa1313410:CDS |
| CCTCTCTTGTACGGTGATTG+TGG | 0.490171 | 8_4:-11348071 | Msa1313410:CDS |
| TAGCGACACCCAAGCAAGGC+TGG | 0.490789 | 8_4:-11347666 | Msa1313410:CDS |
| TAGAAAGTCCAGCCTTGCTT+GGG | 0.500080 | 8_4:+11347658 | None:intergenic |
| GGGACCAATTTGTTCCTTAG+CGG | 0.507529 | 8_4:+11348015 | None:intergenic |
| ATGGTCTCCGAATCTGTACC+CGG | 0.509670 | 8_4:-11348856 | Msa1313410:CDS |
| GACGATATGACTTGTAGAGT+TGG | 0.510842 | 8_4:+11347994 | None:intergenic |
| GAATTCAAGTGATTACTACT+TGG | 0.517361 | 8_4:-11348255 | Msa1313410:CDS |
| GGATGAAAGATTCGATATAG+GGG | 0.520357 | 8_4:-11348914 | Msa1313410:CDS |
| TCCGAATCTGTACCCGGGGA+TGG | 0.522031 | 8_4:-11348850 | Msa1313410:CDS |
| ATCTGTACCCGGGGATGGTG+TGG | 0.522914 | 8_4:-11348845 | Msa1313410:CDS |
| ACCGTACAAGAGAGGTTAGC+AGG | 0.524948 | 8_4:+11348079 | None:intergenic |
| GTTTGTGGAATCTCTCCTCA+AGG | 0.525811 | 8_4:-11347837 | Msa1313410:CDS |
| GGACGTGCATCAGGAGCTCC+CGG | 0.526298 | 8_4:+11349042 | None:intergenic |
| GGTTGGTGCGAAGGATTGCT+AGG | 0.526445 | 8_4:-11347745 | Msa1313410:CDS |
| CTTAGATATAAAACACCCTA+AGG | 0.531876 | 8_4:-11348938 | Msa1313410:CDS |
| AGTGCAGAGTCACCAACAAA+AGG | 0.536032 | 8_4:-11347766 | Msa1313410:CDS |
| AACAATACCACACCATCCCC+GGG | 0.553758 | 8_4:+11348838 | None:intergenic |
| AGCGGCGCCTTCGAAAAGGC+CGG | 0.554536 | 8_4:+11348033 | None:intergenic |
| GTGGACGCTTGTTTCAGCGC+CGG | 0.555105 | 8_4:-11348052 | Msa1313410:CDS |
| TTTATGAACCTCGGGAACAA+TGG | 0.557196 | 8_4:+11347878 | None:intergenic |
| CCAACAAAAGGTTGGTGCGA+AGG | 0.564541 | 8_4:-11347754 | Msa1313410:CDS |
| TCCTGCTAACCTCTCTTGTA+CGG | 0.566296 | 8_4:-11348080 | Msa1313410:CDS |
| ACCATAGATACGAGAATCAT+CGG | 0.570225 | 8_4:+11348226 | None:intergenic |
| TAAGCAGACGTGATACAACC+TGG | 0.577441 | 8_4:+11349021 | None:intergenic |
| AGCGTAGAGTCACCCACCAA+GGG | 0.591381 | 8_4:-11347799 | Msa1313410:CDS |
| CAGAGTCACCAACAAAAGGT+TGG | 0.603892 | 8_4:-11347762 | Msa1313410:CDS |
| GTTGCATGTATATCAAATCC+GGG | 0.606506 | 8_4:-11349060 | Msa1313410:CDS |
| GATATCATCCATTGTTCCCG+AGG | 0.609122 | 8_4:-11347886 | Msa1313410:CDS |
| GATGAAAGATTCGATATAGG+GGG | 0.619536 | 8_4:-11348913 | Msa1313410:CDS |
| TTTGTAGCGACACCCAAGCA+AGG | 0.619617 | 8_4:-11347670 | Msa1313410:CDS |
| TGGTCTCCGAATCTGTACCC+GGG | 0.625032 | 8_4:-11348855 | Msa1313410:CDS |
| AAGCGTAGAGTCACCCACCA+AGG | 0.632729 | 8_4:-11347800 | Msa1313410:CDS |
| AACAATCTTCTATAGGTGAG+AGG | 0.633433 | 8_4:-11347922 | Msa1313410:CDS |
| AGATATAAAACACCCTAAGG+AGG | 0.640748 | 8_4:-11348935 | Msa1313410:CDS |
| TACAGGGCATGGAGGAACTG+TGG | 0.641620 | 8_4:-11348297 | Msa1313410:intron |
| GAGGAGAGATTCCACAAACA+AGG | 0.648421 | 8_4:+11347841 | None:intergenic |
| AGGGCATGGAGGAACTGTGG+AGG | 0.649291 | 8_4:-11348294 | Msa1313410:CDS |
| CCACAATCACCGTACAAGAG+AGG | 0.649619 | 8_4:+11348071 | None:intergenic |
| GGTCTCCGAATCTGTACCCG+GGG | 0.650650 | 8_4:-11348854 | Msa1313410:CDS |
| AATTTGTATACAGGGCATGG+AGG | 0.718727 | 8_4:-11348305 | Msa1313410:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTCTTTTTTCGAAATTTTT+AGG | - | chr8_4:11348045-11348064 | Msa1313410:CDS | 15.0% |
| !!! | CATTTTTTAGGATAAATTTT+AGG | - | chr8_4:11348243-11348262 | Msa1313410:CDS | 15.0% |
| !! | AAAAAATATTGGAAAAAGAT+GGG | - | chr8_4:11349006-11349025 | Msa1313410:CDS | 15.0% |
| !!! | ATTCTTTTTTCGAAATTTTT+AGG | - | chr8_4:11348045-11348064 | Msa1313410:CDS | 15.0% |
| !!! | CATTTTTTAGGATAAATTTT+AGG | - | chr8_4:11348243-11348262 | Msa1313410:CDS | 15.0% |
| !! | AAAAAATATTGGAAAAAGAT+GGG | - | chr8_4:11349006-11349025 | Msa1313410:CDS | 15.0% |
| !!! | AAACTTTTGATCAAAAGATA+TGG | - | chr8_4:11347733-11347752 | Msa1313410:CDS | 20.0% |
| !!! | AACTTTTGATCAAAAGATAT+GGG | - | chr8_4:11347734-11347753 | Msa1313410:CDS | 20.0% |
| !!! | TTTTAGGATAAATTTTAGGA+AGG | - | chr8_4:11348247-11348266 | Msa1313410:CDS | 20.0% |
| !!! | TTTAGGATAAATTTTAGGAA+GGG | - | chr8_4:11348248-11348267 | Msa1313410:CDS | 20.0% |
| !! | AGATTTATGAATTTGTATAC+AGG | - | chr8_4:11348407-11348426 | Msa1313410:intron | 20.0% |
| !! | GATTTATGAATTTGTATACA+GGG | - | chr8_4:11348408-11348427 | Msa1313410:intron | 20.0% |
| !!! | TTGTTCTTATCATTTTTTGA+AGG | + | chr8_4:11348620-11348639 | None:intergenic | 20.0% |
| !! | GAAAAAATATTGGAAAAAGA+TGG | - | chr8_4:11349005-11349024 | Msa1313410:CDS | 20.0% |
| !! | AAAAATATTGGAAAAAGATG+GGG | - | chr8_4:11349007-11349026 | Msa1313410:CDS | 20.0% |
| !!! | AAACTTTTGATCAAAAGATA+TGG | - | chr8_4:11347733-11347752 | Msa1313410:CDS | 20.0% |
| !!! | AACTTTTGATCAAAAGATAT+GGG | - | chr8_4:11347734-11347753 | Msa1313410:CDS | 20.0% |
| !!! | TTTTAGGATAAATTTTAGGA+AGG | - | chr8_4:11348247-11348266 | Msa1313410:CDS | 20.0% |
| !!! | TTTAGGATAAATTTTAGGAA+GGG | - | chr8_4:11348248-11348267 | Msa1313410:CDS | 20.0% |
| !! | AGATTTATGAATTTGTATAC+AGG | - | chr8_4:11348407-11348426 | Msa1313410:intron | 20.0% |
| !! | GATTTATGAATTTGTATACA+GGG | - | chr8_4:11348408-11348427 | Msa1313410:intron | 20.0% |
| !!! | TTGTTCTTATCATTTTTTGA+AGG | + | chr8_4:11348620-11348639 | None:intergenic | 20.0% |
| !! | GAAAAAATATTGGAAAAAGA+TGG | - | chr8_4:11349005-11349024 | Msa1313410:CDS | 20.0% |
| !! | AAAAATATTGGAAAAAGATG+GGG | - | chr8_4:11349007-11349026 | Msa1313410:CDS | 20.0% |
| ! | AGAACTAAAGCTAAAAGATA+TGG | - | chr8_4:11347846-11347865 | Msa1313410:CDS | 25.0% |
| !!! | TCGATTAAGCTTTAAAGAAA+CGG | + | chr8_4:11348005-11348024 | None:intergenic | 25.0% |
| ! | CGAAAAAAGAATTAAGCTAA+GGG | + | chr8_4:11348037-11348056 | None:intergenic | 25.0% |
| ! | TCGAAAAAAGAATTAAGCTA+AGG | + | chr8_4:11348038-11348057 | None:intergenic | 25.0% |
| !!! | TTTTTCGAAATTTTTAGGCA+AGG | - | chr8_4:11348050-11348069 | Msa1313410:CDS | 25.0% |
| !!! | TTTTCGAAATTTTTAGGCAA+GGG | - | chr8_4:11348051-11348070 | Msa1313410:CDS | 25.0% |
| !! | TTGTTTCACATAGTTTCTTT+TGG | - | chr8_4:11348212-11348231 | Msa1313410:intron | 25.0% |
| !! | TGTTTCACATAGTTTCTTTT+GGG | - | chr8_4:11348213-11348232 | Msa1313410:intron | 25.0% |
| !!! | TGATGAATTCTGGAAATTTT+TGG | - | chr8_4:11348306-11348325 | Msa1313410:intron | 25.0% |
| !!! | GATGAATTCTGGAAATTTTT+GGG | - | chr8_4:11348307-11348326 | Msa1313410:intron | 25.0% |
| !!! | TAGGCTTTTGGAAAAAATAT+TGG | - | chr8_4:11348995-11349014 | Msa1313410:CDS | 25.0% |
| ! | AGAACTAAAGCTAAAAGATA+TGG | - | chr8_4:11347846-11347865 | Msa1313410:CDS | 25.0% |
| !!! | TCGATTAAGCTTTAAAGAAA+CGG | + | chr8_4:11348005-11348024 | None:intergenic | 25.0% |
| ! | CGAAAAAAGAATTAAGCTAA+GGG | + | chr8_4:11348037-11348056 | None:intergenic | 25.0% |
| ! | TCGAAAAAAGAATTAAGCTA+AGG | + | chr8_4:11348038-11348057 | None:intergenic | 25.0% |
| !!! | TTTTTCGAAATTTTTAGGCA+AGG | - | chr8_4:11348050-11348069 | Msa1313410:CDS | 25.0% |
| !!! | TTTTCGAAATTTTTAGGCAA+GGG | - | chr8_4:11348051-11348070 | Msa1313410:CDS | 25.0% |
| !! | TTGTTTCACATAGTTTCTTT+TGG | - | chr8_4:11348212-11348231 | Msa1313410:intron | 25.0% |
| !! | TGTTTCACATAGTTTCTTTT+GGG | - | chr8_4:11348213-11348232 | Msa1313410:intron | 25.0% |
| !!! | TGATGAATTCTGGAAATTTT+TGG | - | chr8_4:11348306-11348325 | Msa1313410:intron | 25.0% |
| !!! | GATGAATTCTGGAAATTTTT+GGG | - | chr8_4:11348307-11348326 | Msa1313410:intron | 25.0% |
| !!! | TAGGCTTTTGGAAAAAATAT+TGG | - | chr8_4:11348995-11349014 | Msa1313410:CDS | 25.0% |
| AGTTGCATGTATATCAAATC+CGG | - | chr8_4:11347660-11347679 | Msa1313410:CDS | 30.0% | |
| AGATTAAGCTGATATGTTTG+CGG | + | chr8_4:11347765-11347784 | None:intergenic | 30.0% | |
| CTTAGATATAAAACACCCTA+AGG | - | chr8_4:11347783-11347802 | Msa1313410:CDS | 30.0% | |
| AGGATGAAAGATTCGATATA+GGG | - | chr8_4:11347806-11347825 | Msa1313410:CDS | 30.0% | |
| AAAAGAATTAAGCTAAGGGA+CGG | + | chr8_4:11348033-11348052 | None:intergenic | 30.0% | |
| !! | TTTCGAAATTTTTAGGCAAG+GGG | - | chr8_4:11348052-11348071 | Msa1313410:CDS | 30.0% |
| ! | GGTTTTCTGTTTATTCACAA+AGG | - | chr8_4:11348146-11348165 | Msa1313410:intron | 30.0% |
| !!! | TTGGGTGCTATTCATTTTTT+AGG | - | chr8_4:11348231-11348250 | Msa1313410:CDS | 30.0% |
| !!! | ATTTTTGGGTCAACAAATTC+TGG | - | chr8_4:11348321-11348340 | Msa1313410:intron | 30.0% |
| GAATTCAAGTGATTACTACT+TGG | - | chr8_4:11348466-11348485 | Msa1313410:intron | 30.0% | |
| TGCAACAAACAATCTTCTAT+AGG | - | chr8_4:11348792-11348811 | Msa1313410:intron | 30.0% | |
| AGTTGCATGTATATCAAATC+CGG | - | chr8_4:11347660-11347679 | Msa1313410:CDS | 30.0% | |
| AGATTAAGCTGATATGTTTG+CGG | + | chr8_4:11347765-11347784 | None:intergenic | 30.0% | |
| CTTAGATATAAAACACCCTA+AGG | - | chr8_4:11347783-11347802 | Msa1313410:CDS | 30.0% | |
| AGGATGAAAGATTCGATATA+GGG | - | chr8_4:11347806-11347825 | Msa1313410:CDS | 30.0% | |
| AAAAGAATTAAGCTAAGGGA+CGG | + | chr8_4:11348033-11348052 | None:intergenic | 30.0% | |
| !! | TTTCGAAATTTTTAGGCAAG+GGG | - | chr8_4:11348052-11348071 | Msa1313410:CDS | 30.0% |
| ! | GGTTTTCTGTTTATTCACAA+AGG | - | chr8_4:11348146-11348165 | Msa1313410:intron | 30.0% |
| !!! | TTGGGTGCTATTCATTTTTT+AGG | - | chr8_4:11348231-11348250 | Msa1313410:CDS | 30.0% |
| !!! | ATTTTTGGGTCAACAAATTC+TGG | - | chr8_4:11348321-11348340 | Msa1313410:intron | 30.0% |
| GAATTCAAGTGATTACTACT+TGG | - | chr8_4:11348466-11348485 | Msa1313410:intron | 30.0% | |
| TGCAACAAACAATCTTCTAT+AGG | - | chr8_4:11348792-11348811 | Msa1313410:intron | 30.0% | |
| GTTGCATGTATATCAAATCC+GGG | - | chr8_4:11347661-11347680 | Msa1313410:CDS | 35.0% | |
| AGATATAAAACACCCTAAGG+AGG | - | chr8_4:11347786-11347805 | Msa1313410:CDS | 35.0% | |
| GAGGATGAAAGATTCGATAT+AGG | - | chr8_4:11347805-11347824 | Msa1313410:CDS | 35.0% | |
| GGATGAAAGATTCGATATAG+GGG | - | chr8_4:11347807-11347826 | Msa1313410:CDS | 35.0% | |
| GATGAAAGATTCGATATAGG+GGG | - | chr8_4:11347808-11347827 | Msa1313410:CDS | 35.0% | |
| !!! | GGTATTGTTTTTGACAGGTA+TGG | - | chr8_4:11347897-11347916 | Msa1313410:CDS | 35.0% |
| AAAGAATTAAGCTAAGGGAC+GGG | + | chr8_4:11348032-11348051 | None:intergenic | 35.0% | |
| TCTGTTTATTCACAAAGGTC+TGG | - | chr8_4:11348151-11348170 | Msa1313410:intron | 35.0% | |
| CTGTTTATTCACAAAGGTCT+GGG | - | chr8_4:11348152-11348171 | Msa1313410:intron | 35.0% | |
| !! | AGGATAAATTTTAGGAAGGG+TGG | - | chr8_4:11348251-11348270 | Msa1313410:CDS | 35.0% |
| ! | ATGAAGATGGTGATGAATTC+TGG | - | chr8_4:11348296-11348315 | Msa1313410:intron | 35.0% |
| ATGAATTTGTATACAGGGCA+TGG | - | chr8_4:11348413-11348432 | Msa1313410:intron | 35.0% | |
| ACCATAGATACGAGAATCAT+CGG | + | chr8_4:11348498-11348517 | None:intergenic | 35.0% | |
| ! | ACGATATGACTTGTAGAGTT+GGG | + | chr8_4:11348729-11348748 | None:intergenic | 35.0% |
| AACAATCTTCTATAGGTGAG+AGG | - | chr8_4:11348799-11348818 | Msa1313410:intron | 35.0% | |
| ! | GCTTTCTTTTTATGAACCTC+GGG | + | chr8_4:11348854-11348873 | None:intergenic | 35.0% |
| ! | CGCTTTCTTTTTATGAACCT+CGG | + | chr8_4:11348855-11348874 | None:intergenic | 35.0% |
| AGGTTCATAAAAAGAAAGCG+TGG | - | chr8_4:11348855-11348874 | Msa1313410:CDS | 35.0% | |
| GTTGCATGTATATCAAATCC+GGG | - | chr8_4:11347661-11347680 | Msa1313410:CDS | 35.0% | |
| AGATATAAAACACCCTAAGG+AGG | - | chr8_4:11347786-11347805 | Msa1313410:CDS | 35.0% | |
| GAGGATGAAAGATTCGATAT+AGG | - | chr8_4:11347805-11347824 | Msa1313410:CDS | 35.0% | |
| GGATGAAAGATTCGATATAG+GGG | - | chr8_4:11347807-11347826 | Msa1313410:CDS | 35.0% | |
| GATGAAAGATTCGATATAGG+GGG | - | chr8_4:11347808-11347827 | Msa1313410:CDS | 35.0% | |
| !!! | GGTATTGTTTTTGACAGGTA+TGG | - | chr8_4:11347897-11347916 | Msa1313410:CDS | 35.0% |
| AAAGAATTAAGCTAAGGGAC+GGG | + | chr8_4:11348032-11348051 | None:intergenic | 35.0% | |
| TCTGTTTATTCACAAAGGTC+TGG | - | chr8_4:11348151-11348170 | Msa1313410:intron | 35.0% | |
| CTGTTTATTCACAAAGGTCT+GGG | - | chr8_4:11348152-11348171 | Msa1313410:intron | 35.0% | |
| !! | AGGATAAATTTTAGGAAGGG+TGG | - | chr8_4:11348251-11348270 | Msa1313410:CDS | 35.0% |
| ! | ATGAAGATGGTGATGAATTC+TGG | - | chr8_4:11348296-11348315 | Msa1313410:intron | 35.0% |
| ATGAATTTGTATACAGGGCA+TGG | - | chr8_4:11348413-11348432 | Msa1313410:intron | 35.0% | |
| ACCATAGATACGAGAATCAT+CGG | + | chr8_4:11348498-11348517 | None:intergenic | 35.0% | |
| ! | ACGATATGACTTGTAGAGTT+GGG | + | chr8_4:11348729-11348748 | None:intergenic | 35.0% |
| AACAATCTTCTATAGGTGAG+AGG | - | chr8_4:11348799-11348818 | Msa1313410:intron | 35.0% | |
| ! | GCTTTCTTTTTATGAACCTC+GGG | + | chr8_4:11348854-11348873 | None:intergenic | 35.0% |
| ! | CGCTTTCTTTTTATGAACCT+CGG | + | chr8_4:11348855-11348874 | None:intergenic | 35.0% |
| AGGTTCATAAAAAGAAAGCG+TGG | - | chr8_4:11348855-11348874 | Msa1313410:CDS | 35.0% | |
| CGAATCTTTCATCCTCCTTA+GGG | + | chr8_4:11347801-11347820 | None:intergenic | 40.0% | |
| TCGAATCTTTCATCCTCCTT+AGG | + | chr8_4:11347802-11347821 | None:intergenic | 40.0% | |
| !!! | GGTGTGGTATTGTTTTTGAC+AGG | - | chr8_4:11347892-11347911 | Msa1313410:CDS | 40.0% |
| AATTTGTATACAGGGCATGG+AGG | - | chr8_4:11348416-11348435 | Msa1313410:intron | 40.0% | |
| ACCGATGATTCTCGTATCTA+TGG | - | chr8_4:11348494-11348513 | Msa1313410:intron | 40.0% | |
| ! | GACGATATGACTTGTAGAGT+TGG | + | chr8_4:11348730-11348749 | None:intergenic | 40.0% |
| GACGCTATCATTACTGCATT+AGG | + | chr8_4:11348768-11348787 | None:intergenic | 40.0% | |
| ! | AGAAGATTGTTTGTTGCAGC+AGG | + | chr8_4:11348790-11348809 | None:intergenic | 40.0% |
| TCTATAGGTGAGAGGTTCAA+TGG | - | chr8_4:11348807-11348826 | Msa1313410:intron | 40.0% | |
| TTTATGAACCTCGGGAACAA+TGG | + | chr8_4:11348846-11348865 | None:intergenic | 40.0% | |
| ! | TTCTCCTTTTAACAGCCTTG+AGG | + | chr8_4:11348902-11348921 | None:intergenic | 40.0% |
| !! | ACAAAAAAGTGCCGGTTGTT+GGG | + | chr8_4:11349036-11349055 | None:intergenic | 40.0% |
| !! | TACAAAAAAGTGCCGGTTGT+TGG | + | chr8_4:11349037-11349056 | None:intergenic | 40.0% |
| CGAATCTTTCATCCTCCTTA+GGG | + | chr8_4:11347801-11347820 | None:intergenic | 40.0% | |
| TCGAATCTTTCATCCTCCTT+AGG | + | chr8_4:11347802-11347821 | None:intergenic | 40.0% | |
| !!! | GGTGTGGTATTGTTTTTGAC+AGG | - | chr8_4:11347892-11347911 | Msa1313410:CDS | 40.0% |
| AATTTGTATACAGGGCATGG+AGG | - | chr8_4:11348416-11348435 | Msa1313410:intron | 40.0% | |
| ACCGATGATTCTCGTATCTA+TGG | - | chr8_4:11348494-11348513 | Msa1313410:intron | 40.0% | |
| ! | GACGATATGACTTGTAGAGT+TGG | + | chr8_4:11348730-11348749 | None:intergenic | 40.0% |
| GACGCTATCATTACTGCATT+AGG | + | chr8_4:11348768-11348787 | None:intergenic | 40.0% | |
| ! | AGAAGATTGTTTGTTGCAGC+AGG | + | chr8_4:11348790-11348809 | None:intergenic | 40.0% |
| TCTATAGGTGAGAGGTTCAA+TGG | - | chr8_4:11348807-11348826 | Msa1313410:intron | 40.0% | |
| TTTATGAACCTCGGGAACAA+TGG | + | chr8_4:11348846-11348865 | None:intergenic | 40.0% | |
| ! | TTCTCCTTTTAACAGCCTTG+AGG | + | chr8_4:11348902-11348921 | None:intergenic | 40.0% |
| !! | ACAAAAAAGTGCCGGTTGTT+GGG | + | chr8_4:11349036-11349055 | None:intergenic | 40.0% |
| !! | TACAAAAAAGTGCCGGTTGT+TGG | + | chr8_4:11349037-11349056 | None:intergenic | 40.0% |
| TAAGCAGACGTGATACAACC+TGG | + | chr8_4:11347703-11347722 | None:intergenic | 45.0% | |
| AAACAATACCACACCATCCC+CGG | + | chr8_4:11347887-11347906 | None:intergenic | 45.0% | |
| !! | GGGGATTTTGCTGTGTTGTA+TGG | - | chr8_4:11348071-11348090 | Msa1313410:CDS | 45.0% |
| TGCTGTGTTGTATGGTGTGA+TGG | - | chr8_4:11348079-11348098 | Msa1313410:CDS | 45.0% | |
| TATGGTGTGATGGTCACTAG+TGG | - | chr8_4:11348089-11348108 | Msa1313410:CDS | 45.0% | |
| ! | GTATTGTCTCATGGTCTTGC+TGG | - | chr8_4:11348119-11348138 | Msa1313410:intron | 45.0% |
| !! | TCTCATGGTCTTGCTGGTTT+CGG | - | chr8_4:11348125-11348144 | Msa1313410:intron | 45.0% |
| ! | CGGTGTTGGAAAGATGAAGA+TGG | - | chr8_4:11348283-11348302 | Msa1313410:CDS | 45.0% |
| TATCACATCTCCTTTGCTGC+AGG | - | chr8_4:11348588-11348607 | Msa1313410:intron | 45.0% | |
| TCCTGCTAACCTCTCTTGTA+CGG | - | chr8_4:11348641-11348660 | Msa1313410:intron | 45.0% | |
| ! | GGGACCAATTTGTTCCTTAG+CGG | + | chr8_4:11348709-11348728 | None:intergenic | 45.0% |
| ! | GGTGAGAGGTTCAATGGATT+TGG | - | chr8_4:11348813-11348832 | Msa1313410:intron | 45.0% |
| GATATCATCCATTGTTCCCG+AGG | - | chr8_4:11348835-11348854 | Msa1313410:CDS | 45.0% | |
| GAGGAGAGATTCCACAAACA+AGG | + | chr8_4:11348883-11348902 | None:intergenic | 45.0% | |
| GTTTGTGGAATCTCTCCTCA+AGG | - | chr8_4:11348884-11348903 | Msa1313410:CDS | 45.0% | |
| CTCTCCTCAAGGCTGTTAAA+AGG | - | chr8_4:11348895-11348914 | Msa1313410:CDS | 45.0% | |
| CTTTCTCTTCTTCCCTTGGT+GGG | + | chr8_4:11348937-11348956 | None:intergenic | 45.0% | |
| ACTTTCTCTTCTTCCCTTGG+TGG | + | chr8_4:11348938-11348957 | None:intergenic | 45.0% | |
| TGCACTTTCTCTTCTTCCCT+TGG | + | chr8_4:11348941-11348960 | None:intergenic | 45.0% | |
| AGTGCAGAGTCACCAACAAA+AGG | - | chr8_4:11348955-11348974 | Msa1313410:CDS | 45.0% | |
| CAGAGTCACCAACAAAAGGT+TGG | - | chr8_4:11348959-11348978 | Msa1313410:CDS | 45.0% | |
| ! | GTGTCGCTACAAAAAAGTGC+CGG | + | chr8_4:11349044-11349063 | None:intergenic | 45.0% |
| TAGAAAGTCCAGCCTTGCTT+GGG | + | chr8_4:11349066-11349085 | None:intergenic | 45.0% | |
| TAAGCAGACGTGATACAACC+TGG | + | chr8_4:11347703-11347722 | None:intergenic | 45.0% | |
| AAACAATACCACACCATCCC+CGG | + | chr8_4:11347887-11347906 | None:intergenic | 45.0% | |
| !! | GGGGATTTTGCTGTGTTGTA+TGG | - | chr8_4:11348071-11348090 | Msa1313410:CDS | 45.0% |
| TGCTGTGTTGTATGGTGTGA+TGG | - | chr8_4:11348079-11348098 | Msa1313410:CDS | 45.0% | |
| TATGGTGTGATGGTCACTAG+TGG | - | chr8_4:11348089-11348108 | Msa1313410:CDS | 45.0% | |
| ! | GTATTGTCTCATGGTCTTGC+TGG | - | chr8_4:11348119-11348138 | Msa1313410:intron | 45.0% |
| !! | TCTCATGGTCTTGCTGGTTT+CGG | - | chr8_4:11348125-11348144 | Msa1313410:intron | 45.0% |
| ! | CGGTGTTGGAAAGATGAAGA+TGG | - | chr8_4:11348283-11348302 | Msa1313410:CDS | 45.0% |
| TATCACATCTCCTTTGCTGC+AGG | - | chr8_4:11348588-11348607 | Msa1313410:intron | 45.0% | |
| TCCTGCTAACCTCTCTTGTA+CGG | - | chr8_4:11348641-11348660 | Msa1313410:intron | 45.0% | |
| ! | GGGACCAATTTGTTCCTTAG+CGG | + | chr8_4:11348709-11348728 | None:intergenic | 45.0% |
| ! | GGTGAGAGGTTCAATGGATT+TGG | - | chr8_4:11348813-11348832 | Msa1313410:intron | 45.0% |
| GATATCATCCATTGTTCCCG+AGG | - | chr8_4:11348835-11348854 | Msa1313410:CDS | 45.0% | |
| GAGGAGAGATTCCACAAACA+AGG | + | chr8_4:11348883-11348902 | None:intergenic | 45.0% | |
| GTTTGTGGAATCTCTCCTCA+AGG | - | chr8_4:11348884-11348903 | Msa1313410:CDS | 45.0% | |
| CTCTCCTCAAGGCTGTTAAA+AGG | - | chr8_4:11348895-11348914 | Msa1313410:CDS | 45.0% | |
| CTTTCTCTTCTTCCCTTGGT+GGG | + | chr8_4:11348937-11348956 | None:intergenic | 45.0% | |
| ACTTTCTCTTCTTCCCTTGG+TGG | + | chr8_4:11348938-11348957 | None:intergenic | 45.0% | |
| TGCACTTTCTCTTCTTCCCT+TGG | + | chr8_4:11348941-11348960 | None:intergenic | 45.0% | |
| AGTGCAGAGTCACCAACAAA+AGG | - | chr8_4:11348955-11348974 | Msa1313410:CDS | 45.0% | |
| CAGAGTCACCAACAAAAGGT+TGG | - | chr8_4:11348959-11348978 | Msa1313410:CDS | 45.0% | |
| ! | GTGTCGCTACAAAAAAGTGC+CGG | + | chr8_4:11349044-11349063 | None:intergenic | 45.0% |
| TAGAAAGTCCAGCCTTGCTT+GGG | + | chr8_4:11349066-11349085 | None:intergenic | 45.0% | |
| ATACAACCTGGACGTGCATC+AGG | + | chr8_4:11347691-11347710 | None:intergenic | 50.0% | |
| CGATATAGGGGGAACTTCTG+AGG | - | chr8_4:11347819-11347838 | Msa1313410:CDS | 50.0% | |
| ATGGTCTCCGAATCTGTACC+CGG | - | chr8_4:11347865-11347884 | Msa1313410:CDS | 50.0% | |
| AACAATACCACACCATCCCC+GGG | + | chr8_4:11347886-11347905 | None:intergenic | 50.0% | |
| GTGTGATGGTCACTAGTGGT+GGG | - | chr8_4:11348093-11348112 | Msa1313410:CDS | 50.0% | |
| ! | GGTGGGAGTGTATTGTCTCA+TGG | - | chr8_4:11348110-11348129 | Msa1313410:CDS | 50.0% |
| AGGAAGGGTGGTGAAGATGA+CGG | - | chr8_4:11348263-11348282 | Msa1313410:CDS | 50.0% | |
| AAGGTCTGAACCTGCAGCAA+AGG | + | chr8_4:11348601-11348620 | None:intergenic | 50.0% | |
| ACCGTACAAGAGAGGTTAGC+AGG | + | chr8_4:11348645-11348664 | None:intergenic | 50.0% | |
| CCACAATCACCGTACAAGAG+AGG | + | chr8_4:11348653-11348672 | None:intergenic | 50.0% | |
| CCTCTCTTGTACGGTGATTG+TGG | - | chr8_4:11348650-11348669 | Msa1313410:intron | 50.0% | |
| ! | AAAGCGTGGCACCTTGTTTG+TGG | - | chr8_4:11348869-11348888 | Msa1313410:CDS | 50.0% |
| ! | CCTTCGCACCAACCTTTTGT+TGG | + | chr8_4:11348970-11348989 | None:intergenic | 50.0% |
| !! | CCAACAAAAGGTTGGTGCGA+AGG | - | chr8_4:11348967-11348986 | Msa1313410:CDS | 50.0% |
| ! | GCGAAGGATTGCTAGGCTTT+TGG | - | chr8_4:11348983-11349002 | Msa1313410:CDS | 50.0% |
| AGATGGGGAAACCCAACAAC+CGG | - | chr8_4:11349022-11349041 | Msa1313410:CDS | 50.0% | |
| TTTGTAGCGACACCCAAGCA+AGG | - | chr8_4:11349051-11349070 | Msa1313410:CDS | 50.0% | |
| CTAGAAAGTCCAGCCTTGCT+TGG | + | chr8_4:11349067-11349086 | None:intergenic | 50.0% | |
| CAAGCAAGGCTGGACTTTCT+AGG | - | chr8_4:11349065-11349084 | Msa1313410:CDS | 50.0% | |
| ATACAACCTGGACGTGCATC+AGG | + | chr8_4:11347691-11347710 | None:intergenic | 50.0% | |
| CGATATAGGGGGAACTTCTG+AGG | - | chr8_4:11347819-11347838 | Msa1313410:CDS | 50.0% | |
| ATGGTCTCCGAATCTGTACC+CGG | - | chr8_4:11347865-11347884 | Msa1313410:CDS | 50.0% | |
| AACAATACCACACCATCCCC+GGG | + | chr8_4:11347886-11347905 | None:intergenic | 50.0% | |
| GTGTGATGGTCACTAGTGGT+GGG | - | chr8_4:11348093-11348112 | Msa1313410:CDS | 50.0% | |
| ! | GGTGGGAGTGTATTGTCTCA+TGG | - | chr8_4:11348110-11348129 | Msa1313410:CDS | 50.0% |
| AGGAAGGGTGGTGAAGATGA+CGG | - | chr8_4:11348263-11348282 | Msa1313410:CDS | 50.0% | |
| AAGGTCTGAACCTGCAGCAA+AGG | + | chr8_4:11348601-11348620 | None:intergenic | 50.0% | |
| ACCGTACAAGAGAGGTTAGC+AGG | + | chr8_4:11348645-11348664 | None:intergenic | 50.0% | |
| CCACAATCACCGTACAAGAG+AGG | + | chr8_4:11348653-11348672 | None:intergenic | 50.0% | |
| CCTCTCTTGTACGGTGATTG+TGG | - | chr8_4:11348650-11348669 | Msa1313410:intron | 50.0% | |
| ! | AAAGCGTGGCACCTTGTTTG+TGG | - | chr8_4:11348869-11348888 | Msa1313410:CDS | 50.0% |
| ! | CCTTCGCACCAACCTTTTGT+TGG | + | chr8_4:11348970-11348989 | None:intergenic | 50.0% |
| !! | CCAACAAAAGGTTGGTGCGA+AGG | - | chr8_4:11348967-11348986 | Msa1313410:CDS | 50.0% |
| ! | GCGAAGGATTGCTAGGCTTT+TGG | - | chr8_4:11348983-11349002 | Msa1313410:CDS | 50.0% |
| AGATGGGGAAACCCAACAAC+CGG | - | chr8_4:11349022-11349041 | Msa1313410:CDS | 50.0% | |
| TTTGTAGCGACACCCAAGCA+AGG | - | chr8_4:11349051-11349070 | Msa1313410:CDS | 50.0% | |
| CTAGAAAGTCCAGCCTTGCT+TGG | + | chr8_4:11349067-11349086 | None:intergenic | 50.0% | |
| CAAGCAAGGCTGGACTTTCT+AGG | - | chr8_4:11349065-11349084 | Msa1313410:CDS | 50.0% | |
| TGGTCTCCGAATCTGTACCC+GGG | - | chr8_4:11347866-11347885 | Msa1313410:CDS | 55.0% | |
| ACCATCCCCGGGTACAGATT+CGG | + | chr8_4:11347875-11347894 | None:intergenic | 55.0% | |
| GGTGTGATGGTCACTAGTGG+TGG | - | chr8_4:11348092-11348111 | Msa1313410:CDS | 55.0% | |
| ! | GGTGGTGAAGATGACGGTGT+TGG | - | chr8_4:11348269-11348288 | Msa1313410:CDS | 55.0% |
| TACAGGGCATGGAGGAACTG+TGG | - | chr8_4:11348424-11348443 | Msa1313410:intron | 55.0% | |
| GGCGCCGCTAAGGAACAAAT+TGG | - | chr8_4:11348702-11348721 | Msa1313410:intron | 55.0% | |
| AAGCGTAGAGTCACCCACCA+AGG | - | chr8_4:11348921-11348940 | Msa1313410:CDS | 55.0% | |
| AGCGTAGAGTCACCCACCAA+GGG | - | chr8_4:11348922-11348941 | Msa1313410:CDS | 55.0% | |
| ! | GGTTGGTGCGAAGGATTGCT+AGG | - | chr8_4:11348976-11348995 | Msa1313410:CDS | 55.0% |
| TGGTCTCCGAATCTGTACCC+GGG | - | chr8_4:11347866-11347885 | Msa1313410:CDS | 55.0% | |
| ACCATCCCCGGGTACAGATT+CGG | + | chr8_4:11347875-11347894 | None:intergenic | 55.0% | |
| GGTGTGATGGTCACTAGTGG+TGG | - | chr8_4:11348092-11348111 | Msa1313410:CDS | 55.0% | |
| ! | GGTGGTGAAGATGACGGTGT+TGG | - | chr8_4:11348269-11348288 | Msa1313410:CDS | 55.0% |
| TACAGGGCATGGAGGAACTG+TGG | - | chr8_4:11348424-11348443 | Msa1313410:intron | 55.0% | |
| GGCGCCGCTAAGGAACAAAT+TGG | - | chr8_4:11348702-11348721 | Msa1313410:intron | 55.0% | |
| AAGCGTAGAGTCACCCACCA+AGG | - | chr8_4:11348921-11348940 | Msa1313410:CDS | 55.0% | |
| AGCGTAGAGTCACCCACCAA+GGG | - | chr8_4:11348922-11348941 | Msa1313410:CDS | 55.0% | |
| ! | GGTTGGTGCGAAGGATTGCT+AGG | - | chr8_4:11348976-11348995 | Msa1313410:CDS | 55.0% |
| GGTCTCCGAATCTGTACCCG+GGG | - | chr8_4:11347867-11347886 | Msa1313410:CDS | 60.0% | |
| TCCGAATCTGTACCCGGGGA+TGG | - | chr8_4:11347871-11347890 | Msa1313410:CDS | 60.0% | |
| ATCTGTACCCGGGGATGGTG+TGG | - | chr8_4:11347876-11347895 | Msa1313410:CDS | 60.0% | |
| AGGGCATGGAGGAACTGTGG+AGG | - | chr8_4:11348427-11348446 | Msa1313410:intron | 60.0% | |
| GCATGGAGGAACTGTGGAGG+AGG | - | chr8_4:11348430-11348449 | Msa1313410:intron | 60.0% | |
| GTGGACGCTTGTTTCAGCGC+CGG | - | chr8_4:11348669-11348688 | Msa1313410:intron | 60.0% | |
| !!! | TTCAGCGCCGGCCTTTTCGA+AGG | - | chr8_4:11348681-11348700 | Msa1313410:intron | 60.0% |
| CCTTAGCGGCGCCTTCGAAA+AGG | + | chr8_4:11348695-11348714 | None:intergenic | 60.0% | |
| !!! | CCTTTTCGAAGGCGCCGCTA+AGG | - | chr8_4:11348692-11348711 | Msa1313410:intron | 60.0% |
| TAGCGACACCCAAGCAAGGC+TGG | - | chr8_4:11349055-11349074 | Msa1313410:CDS | 60.0% | |
| GGTCTCCGAATCTGTACCCG+GGG | - | chr8_4:11347867-11347886 | Msa1313410:CDS | 60.0% | |
| TCCGAATCTGTACCCGGGGA+TGG | - | chr8_4:11347871-11347890 | Msa1313410:CDS | 60.0% | |
| ATCTGTACCCGGGGATGGTG+TGG | - | chr8_4:11347876-11347895 | Msa1313410:CDS | 60.0% | |
| AGGGCATGGAGGAACTGTGG+AGG | - | chr8_4:11348427-11348446 | Msa1313410:intron | 60.0% | |
| GCATGGAGGAACTGTGGAGG+AGG | - | chr8_4:11348430-11348449 | Msa1313410:intron | 60.0% | |
| GTGGACGCTTGTTTCAGCGC+CGG | - | chr8_4:11348669-11348688 | Msa1313410:intron | 60.0% | |
| !!! | TTCAGCGCCGGCCTTTTCGA+AGG | - | chr8_4:11348681-11348700 | Msa1313410:intron | 60.0% |
| CCTTAGCGGCGCCTTCGAAA+AGG | + | chr8_4:11348695-11348714 | None:intergenic | 60.0% | |
| !!! | CCTTTTCGAAGGCGCCGCTA+AGG | - | chr8_4:11348692-11348711 | Msa1313410:intron | 60.0% |
| TAGCGACACCCAAGCAAGGC+TGG | - | chr8_4:11349055-11349074 | Msa1313410:CDS | 60.0% | |
| GGACGTGCATCAGGAGCTCC+CGG | + | chr8_4:11347682-11347701 | None:intergenic | 65.0% | |
| GGAGCTCCTGATGCACGTCC+AGG | - | chr8_4:11347682-11347701 | Msa1313410:CDS | 65.0% | |
| AGCGGCGCCTTCGAAAAGGC+CGG | + | chr8_4:11348691-11348710 | None:intergenic | 65.0% | |
| GGACGTGCATCAGGAGCTCC+CGG | + | chr8_4:11347682-11347701 | None:intergenic | 65.0% | |
| GGAGCTCCTGATGCACGTCC+AGG | - | chr8_4:11347682-11347701 | Msa1313410:CDS | 65.0% | |
| AGCGGCGCCTTCGAAAAGGC+CGG | + | chr8_4:11348691-11348710 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 11347643 | 11349100 | 11347643 | ID=Msa1313410;Name=Msa1313410 |
| chr8_4 | mRNA | 11347643 | 11349100 | 11347643 | ID=Msa1313410-mRNA-1;Parent=Msa1313410;Name=Msa1313410-mRNA-1;_AED=0.64;_eAED=0.64;_QI=0|0|0|0.33|1|1|3|0|282 |
| chr8_4 | exon | 11348830 | 11349100 | 11348830 | ID=Msa1313410-mRNA-1:exon:4284;Parent=Msa1313410-mRNA-1 |
| chr8_4 | exon | 11348228 | 11348314 | 11348228 | ID=Msa1313410-mRNA-1:exon:4283;Parent=Msa1313410-mRNA-1 |
| chr8_4 | exon | 11347643 | 11348133 | 11347643 | ID=Msa1313410-mRNA-1:exon:4282;Parent=Msa1313410-mRNA-1 |
| chr8_4 | CDS | 11348830 | 11349100 | 11348830 | ID=Msa1313410-mRNA-1:cds;Parent=Msa1313410-mRNA-1 |
| chr8_4 | CDS | 11348228 | 11348314 | 11348228 | ID=Msa1313410-mRNA-1:cds;Parent=Msa1313410-mRNA-1 |
| chr8_4 | CDS | 11347643 | 11348133 | 11347643 | ID=Msa1313410-mRNA-1:cds;Parent=Msa1313410-mRNA-1 |
| Gene Sequence |
| Protein sequence |
