Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1235340 | XP_003627308.1 | 97.087 | 927 | 11 | 1 | 1 | 911 | 1 | 927 | 0.0 | 1858 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1235340 | sp|O24371|LOX31_SOLTU | 71.597 | 933 | 222 | 6 | 1 | 910 | 1 | 913 | 0.0 | 1372 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1235340 | G7L7J8 | 97.087 | 927 | 11 | 1 | 1 | 911 | 1 | 927 | 0.0 | 1858 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa1235340 | Msa1276570 | 0.879370 | 1.316666e-69 | -8.615850e-47 |
Msa1235340 | Msa1314790 | 0.847029 | 1.497413e-59 | -8.615850e-47 |
Msa1235340 | Msa1356050 | 0.855770 | 5.046213e-62 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1235340 | MtrunA17_Chr8g0344201 | 97.087 | 927 | 11 | 1 | 1 | 911 | 1 | 927 | 0.0 | 1858 |
Msa1235340 | MtrunA17_Chr8g0377101 | 52.732 | 842 | 374 | 7 | 89 | 910 | 78 | 915 | 0.0 | 901 |
Msa1235340 | MtrunA17_Chr4g0047281 | 53.025 | 843 | 346 | 11 | 90 | 911 | 82 | 895 | 0.0 | 879 |
Msa1235340 | MtrunA17_Chr3g0118651 | 47.102 | 811 | 396 | 9 | 122 | 910 | 103 | 902 | 0.0 | 777 |
Msa1235340 | MtrunA17_Chr3g0118641 | 46.979 | 811 | 397 | 11 | 122 | 910 | 102 | 901 | 0.0 | 769 |
Msa1235340 | MtrunA17_Chr3g0118621 | 44.787 | 844 | 432 | 11 | 90 | 910 | 32 | 864 | 0.0 | 730 |
Msa1235340 | MtrunA17_Chr1g0191921 | 44.678 | 855 | 446 | 10 | 79 | 910 | 7 | 857 | 0.0 | 722 |
Msa1235340 | MtrunA17_Chr8g0342881 | 45.988 | 835 | 418 | 12 | 99 | 910 | 31 | 855 | 0.0 | 720 |
Msa1235340 | MtrunA17_Chr8g0343021 | 46.229 | 822 | 405 | 12 | 113 | 910 | 55 | 863 | 0.0 | 714 |
Msa1235340 | MtrunA17_Chr8g0343031 | 46.163 | 821 | 405 | 13 | 114 | 910 | 57 | 864 | 0.0 | 713 |
Msa1235340 | MtrunA17_Chr7g0272791 | 45.336 | 847 | 432 | 14 | 91 | 910 | 24 | 866 | 0.0 | 712 |
Msa1235340 | MtrunA17_Chr5g0406871 | 45.687 | 823 | 409 | 14 | 113 | 910 | 57 | 866 | 0.0 | 709 |
Msa1235340 | MtrunA17_Chr2g0329901 | 46.051 | 823 | 404 | 16 | 113 | 910 | 55 | 862 | 0.0 | 706 |
Msa1235340 | MtrunA17_Chr2g0329911 | 45.089 | 845 | 426 | 15 | 91 | 910 | 29 | 860 | 0.0 | 705 |
Msa1235340 | MtrunA17_Chr4g0033171 | 50.212 | 707 | 324 | 10 | 225 | 910 | 25 | 724 | 0.0 | 703 |
Msa1235340 | MtrunA17_Chr8g0342971 | 45.620 | 822 | 412 | 14 | 114 | 910 | 58 | 869 | 0.0 | 696 |
Msa1235340 | MtrunA17_Chr1g0205611 | 43.641 | 857 | 450 | 13 | 84 | 910 | 2 | 855 | 0.0 | 692 |
Msa1235340 | MtrunA17_Chr8g0344211 | 44.336 | 821 | 424 | 12 | 113 | 910 | 57 | 867 | 0.0 | 686 |
Msa1235340 | MtrunA17_Chr8g0343011 | 44.377 | 818 | 423 | 10 | 113 | 910 | 59 | 864 | 0.0 | 684 |
Msa1235340 | MtrunA17_Chr8g0342921 | 44.349 | 814 | 420 | 12 | 120 | 910 | 65 | 868 | 0.0 | 681 |
Msa1235340 | MtrunA17_Chr8g0342931 | 46.245 | 759 | 376 | 10 | 174 | 910 | 1 | 749 | 0.0 | 678 |
Msa1235340 | MtrunA17_Chr3g0120071 | 45.521 | 826 | 405 | 13 | 113 | 910 | 49 | 857 | 0.0 | 676 |
Msa1235340 | MtrunA17_Chr8g0342891 | 43.484 | 821 | 431 | 12 | 113 | 910 | 50 | 860 | 0.0 | 674 |
Msa1235340 | MtrunA17_Chr8g0342951 | 45.067 | 821 | 418 | 12 | 113 | 910 | 57 | 867 | 0.0 | 672 |
Msa1235340 | MtrunA17_Chr8g0342901 | 42.574 | 808 | 401 | 11 | 128 | 910 | 58 | 827 | 0.0 | 642 |
Msa1235340 | MtrunA17_Chr8g0342981 | 43.007 | 765 | 372 | 13 | 177 | 910 | 91 | 822 | 0.0 | 603 |
Msa1235340 | MtrunA17_Chr8g0343001 | 42.112 | 767 | 374 | 10 | 164 | 910 | 90 | 806 | 0.0 | 582 |
Msa1235340 | MtrunA17_Chr8g0342991 | 42.057 | 768 | 373 | 12 | 164 | 910 | 90 | 806 | 0.0 | 575 |
Msa1235340 | MtrunA17_Chr8g0338451 | 37.182 | 866 | 501 | 13 | 65 | 897 | 1 | 856 | 0.0 | 561 |
Msa1235340 | MtrunA17_Chr8g0344241 | 44.810 | 395 | 199 | 4 | 534 | 910 | 67 | 460 | 2.50e-111 | 350 |
Msa1235340 | MtrunA17_Chr6g0471951 | 36.926 | 501 | 259 | 6 | 385 | 866 | 12 | 474 | 2.39e-105 | 335 |
Msa1235340 | MtrunA17_Chr7g0218231 | 52.101 | 119 | 41 | 1 | 578 | 680 | 14 | 132 | 1.29e-33 | 126 |
Msa1235340 | MtrunA17_Chr6g0468081 | 59.551 | 89 | 36 | 0 | 592 | 680 | 1 | 89 | 6.04e-31 | 117 |
Msa1235340 | MtrunA17_Chr4g0047271 | 58.696 | 92 | 38 | 0 | 820 | 911 | 1 | 92 | 8.46e-29 | 110 |
Msa1235340 | MtrunA17_Chr4g0033181 | 33.862 | 189 | 99 | 5 | 44 | 229 | 46 | 211 | 2.86e-27 | 111 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1235340 | AT1G17420.1 | 68.461 | 929 | 263 | 6 | 1 | 910 | 1 | 918 | 0.0 | 1330 |
Msa1235340 | AT1G72520.1 | 69.305 | 935 | 252 | 11 | 1 | 910 | 1 | 925 | 0.0 | 1315 |
Msa1235340 | AT1G67560.1 | 50.162 | 927 | 418 | 15 | 7 | 910 | 11 | 916 | 0.0 | 867 |
Msa1235340 | AT3G45140.1 | 43.088 | 868 | 448 | 15 | 66 | 910 | 51 | 895 | 0.0 | 715 |
Msa1235340 | AT1G55020.1 | 44.799 | 846 | 435 | 14 | 90 | 910 | 20 | 858 | 0.0 | 711 |
Msa1235340 | AT3G22400.1 | 43.735 | 862 | 448 | 12 | 83 | 910 | 27 | 885 | 0.0 | 703 |
Msa1235340 | AT3G45140.2 | 45.921 | 760 | 379 | 11 | 173 | 910 | 4 | 753 | 0.0 | 688 |
Find 196 sgRNAs with CRISPR-Local
Find 513 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CACTGAAAATGTGTTCATTT+TGG | 0.118061 | 8_2:-13300603 | None:intergenic |
TTTACGGTTGACTCAAATTT+TGG | 0.128121 | 8_2:+13297677 | Msa1235340:CDS |
GCAAGATCAATTCCTTTATC+TGG | 0.137436 | 8_2:-13299014 | None:intergenic |
CAACATGCTGCACTTAATTT+TGG | 0.137566 | 8_2:+13305062 | Msa1235340:CDS |
CTTTAGATGCAACTACTAAT+TGG | 0.156046 | 8_2:+13302948 | Msa1235340:CDS |
GAGCAGAAAGACTTGATTTA+AGG | 0.159246 | 8_2:-13300664 | None:intergenic |
TTTGGTCAGCAATAGAAAAT+TGG | 0.164309 | 8_2:+13304847 | Msa1235340:CDS |
ACTCTCTGTCATTGATAATT+AGG | 0.188804 | 8_2:-13304908 | None:intergenic |
TATCAATTCTCTGCGGAAAT+TGG | 0.203663 | 8_2:+13305347 | Msa1235340:CDS |
TTGTCACTGTCGTTCAATTT+TGG | 0.218955 | 8_2:-13304996 | None:intergenic |
CAGAAGATGGTCTTCTAATT+TGG | 0.251107 | 8_2:+13304829 | Msa1235340:CDS |
TCTTGTGGACCATAGATTTC+AGG | 0.265813 | 8_2:-13302045 | None:intergenic |
AAGTCCTAACAATCTTAATT+TGG | 0.267658 | 8_2:+13305027 | Msa1235340:CDS |
CATTCCAAATTAAGATTGTT+AGG | 0.277408 | 8_2:-13305031 | None:intergenic |
TACCCTGGCTTGTGGATTCT+TGG | 0.281500 | 8_2:-13300811 | None:intergenic |
TCGTCTGACGAAGAGTATTT+AGG | 0.285117 | 8_2:+13305269 | Msa1235340:CDS |
GAAAAGAAAATTCTCTTTCC+AGG | 0.286608 | 8_2:-13297833 | None:intergenic |
GATATGAAACTTGTATATTC+AGG | 0.290338 | 8_2:-13305158 | None:intergenic |
GAATTACTTGCTCCTAGTTC+TGG | 0.295134 | 8_2:+13305449 | Msa1235340:CDS |
TCAAAGAAACCTTTGATTCA+TGG | 0.303009 | 8_2:+13297017 | Msa1235340:exon |
TTGATAATTAGGCTTGGATT+TGG | 0.306532 | 8_2:-13304897 | None:intergenic |
TCCTCAAATCTTTCATCTCT+TGG | 0.311154 | 8_2:-13300578 | None:intergenic |
TCAGGATCTAATTTACTAAC+AGG | 0.316657 | 8_2:-13302027 | None:intergenic |
GTTGCAAGCTACAAAATATA+TGG | 0.317917 | 8_2:+13305220 | Msa1235340:CDS |
TAATTACACAGCTGAATTTA+CGG | 0.322203 | 8_2:+13297661 | Msa1235340:CDS |
CCACTCACTTGATATAATCT+TGG | 0.323901 | 8_2:-13300852 | None:intergenic |
AATGAATTCTCAGATGTTGA+TGG | 0.326863 | 8_2:+13300701 | Msa1235340:CDS |
GTCAAAGAAGACTAATATTA+AGG | 0.327000 | 8_2:+13297628 | Msa1235340:CDS |
ATCCTTCAACACTGCTTCAT+TGG | 0.329544 | 8_2:-13297603 | None:intergenic |
GTATTAATCTTCTCATCAAC+GGG | 0.342100 | 8_2:-13305121 | None:intergenic |
GGATCCAATAACTTGAAAAT+TGG | 0.359274 | 8_2:-13303490 | None:intergenic |
GTAAGTCTCTCAATGGTAAC+AGG | 0.380176 | 8_2:-13301994 | None:intergenic |
TTAGAAAATATAACAATTGA+AGG | 0.381425 | 8_2:+13297749 | Msa1235340:CDS |
AGAGGCAACAACCTTCGATT+TGG | 0.381540 | 8_2:+13305294 | Msa1235340:CDS |
GTGCTTCATAACTTGCTTCC+TGG | 0.384287 | 8_2:+13300641 | Msa1235340:CDS |
GATCTTGGAAACCCAGATAA+AGG | 0.388829 | 8_2:+13299002 | Msa1235340:CDS |
GGCCCTAACAAAAGAATTCA+TGG | 0.391351 | 8_2:+13297038 | Msa1235340:CDS |
GGTGAAGAAGAAGGAAATAT+TGG | 0.394404 | 8_2:-13297081 | None:intergenic |
AGAATTCATGGGTTCTTCAT+TGG | 0.395604 | 8_2:+13297050 | Msa1235340:CDS |
TTGAGGAACCGTTGCGGTGC+TGG | 0.401483 | 8_2:+13305413 | Msa1235340:CDS |
TTGGTCAGCAATAGAAAATT+GGG | 0.402009 | 8_2:+13304848 | Msa1235340:CDS |
GAACTTAGCCTGCCTCCATC+TGG | 0.403989 | 8_2:+13302890 | Msa1235340:CDS |
TTTGTTGATTTCTATGAAGA+AGG | 0.407074 | 8_2:-13296967 | None:intergenic |
AATCTTTCATTATTAGCTTT+AGG | 0.408760 | 8_2:-13304797 | None:intergenic |
TATGACACATACAATGATCT+TGG | 0.412730 | 8_2:+13298987 | Msa1235340:CDS |
CACTCACTTGATATAATCTT+GGG | 0.413543 | 8_2:-13300851 | None:intergenic |
AGAAGACCATCTTCTGCATA+AGG | 0.416449 | 8_2:-13304822 | None:intergenic |
TCTTGGGAATGTCATACTTA+AGG | 0.423843 | 8_2:-13300835 | None:intergenic |
AAATTAAGATTGTTAGGACT+TGG | 0.428810 | 8_2:-13305025 | None:intergenic |
TTTAGATGCAACTACTAATT+GGG | 0.429267 | 8_2:+13302949 | Msa1235340:CDS |
TGAGTAGTCCAACACTATAA+AGG | 0.430450 | 8_2:-13300724 | None:intergenic |
GATCTTGAGGGAGGCTATCC+TGG | 0.433367 | 8_2:-13303657 | None:intergenic |
CTGTCATTGATAATTAGGCT+TGG | 0.434975 | 8_2:-13304903 | None:intergenic |
TGTTGGACTACTCATTAAGT+TGG | 0.436827 | 8_2:+13300733 | Msa1235340:CDS |
AGAAGTGGAACAGTGAGAAA+TGG | 0.437846 | 8_2:-13296913 | None:intergenic |
TGCTAAGCATTATGGTTGGT+TGG | 0.439918 | 8_2:+13305565 | Msa1235340:three_prime_UTR |
TGATAATTAGGCTTGGATTT+GGG | 0.441029 | 8_2:-13304896 | None:intergenic |
AGGCTAAGTTCAATTGCAAC+AGG | 0.441630 | 8_2:-13302878 | None:intergenic |
TCTTTAAGTGCAGACTCTTG+TGG | 0.444467 | 8_2:-13302060 | None:intergenic |
CAAGATCAATTCCTTTATCT+GGG | 0.447942 | 8_2:-13299013 | None:intergenic |
ATTGAGTCTTGCTTCACTCC+TGG | 0.448673 | 8_2:+13303580 | Msa1235340:CDS |
CCATGATTCGTCTTTCATAT+CGG | 0.451611 | 8_2:-13304970 | None:intergenic |
GACCAATGAAGCAGTGTTGA+AGG | 0.454038 | 8_2:+13297601 | Msa1235340:CDS |
TTAGGCCATGTGGTTGTGTT+GGG | 0.454721 | 8_2:-13304779 | None:intergenic |
TTTAGGCCATGTGGTTGTGT+TGG | 0.455236 | 8_2:-13304780 | None:intergenic |
ATGGAAACAAAAGAGTTGTA+AGG | 0.456748 | 8_2:+13297157 | Msa1235340:CDS |
TTTGTAGCTTGCAACAAACT+AGG | 0.458682 | 8_2:-13305212 | None:intergenic |
TCTTTCATTTCTCCAAACAT+AGG | 0.459834 | 8_2:+13296936 | Msa1235340:five_prime_UTR |
TTGGTGCACACCAGCATCAT+TGG | 0.460866 | 8_2:-13303002 | None:intergenic |
TTGAGAAGGTGATTGATAGT+AGG | 0.462008 | 8_2:+13305375 | Msa1235340:CDS |
CAAGCTAGGAAAGATCTTCC+TGG | 0.462757 | 8_2:+13297815 | Msa1235340:CDS |
GCTCTAACCTTAAATTTCAC+TGG | 0.462917 | 8_2:-13297291 | None:intergenic |
GAAAGACTTGATTTAAGGCC+AGG | 0.464489 | 8_2:-13300659 | None:intergenic |
ACAATTGAAGGATTTGCTAC+TGG | 0.466343 | 8_2:+13297761 | Msa1235340:CDS |
AAATTAGATCCTGAAATCTA+TGG | 0.468171 | 8_2:+13302036 | Msa1235340:CDS |
GTGGCCTACATTGATTGATT+CGG | 0.469250 | 8_2:-13304946 | None:intergenic |
AACTCCAGCTATTGCTTGAC+GGG | 0.470233 | 8_2:-13301968 | None:intergenic |
TTTGGCACGTACCCTCCATA+AGG | 0.471877 | 8_2:-13305092 | None:intergenic |
TCTTCACTGATAGCTGCAAC+AGG | 0.474972 | 8_2:-13297201 | None:intergenic |
GTTGGACTACTCATTAAGTT+GGG | 0.477312 | 8_2:+13300734 | Msa1235340:CDS |
ACCAAGAGATGAAAGATTTG+AGG | 0.477798 | 8_2:+13300577 | Msa1235340:CDS |
GCAATTCTTGGGTTCAAGCT+AGG | 0.478592 | 8_2:+13297801 | Msa1235340:CDS |
TTTGGAAAGGATCAATGCCT+TGG | 0.478720 | 8_2:+13302793 | Msa1235340:CDS |
GATCTTGCTAGACCAACTCT+TGG | 0.479530 | 8_2:+13299029 | Msa1235340:CDS |
CCATTCTTCTGTTGAAAACA+TGG | 0.484479 | 8_2:-13297102 | None:intergenic |
GAAGATGATGATATAGAAGA+AGG | 0.486786 | 8_2:-13297246 | None:intergenic |
TCATCTCTTGGTATATACAT+AGG | 0.492403 | 8_2:-13300566 | None:intergenic |
TAACTCCAGCTATTGCTTGA+CGG | 0.493184 | 8_2:-13301969 | None:intergenic |
CCATGTGGTTGTGTTGGGTC+AGG | 0.494913 | 8_2:-13304774 | None:intergenic |
CGGCCAGTACGGCACCGTCT+AGG | 0.495310 | 8_2:-13299074 | None:intergenic |
ATGAAGCAGTGTTGAAGGAT+TGG | 0.497542 | 8_2:+13297606 | Msa1235340:CDS |
TACCCTAGACGGTGCCGTAC+TGG | 0.498027 | 8_2:+13299071 | Msa1235340:CDS |
GAAGACCATCTTCTGCATAA+GGG | 0.501628 | 8_2:-13304821 | None:intergenic |
TGCACCAACTTGCCCACCAT+TGG | 0.505334 | 8_2:+13303017 | Msa1235340:CDS |
CTCAAAAGTTTAATCCCAGC+AGG | 0.506743 | 8_2:-13298894 | None:intergenic |
CATGTTTGCTCCAATGATGC+TGG | 0.508665 | 8_2:+13302992 | Msa1235340:CDS |
TGAAAACATGGTGAAGAAGA+AGG | 0.510506 | 8_2:-13297090 | None:intergenic |
GGCCGTGAACCATCTGATAC+AGG | 0.510574 | 8_2:+13299092 | Msa1235340:CDS |
TTTATCACAGTAATAGCTCC+TGG | 0.510933 | 8_2:-13297704 | None:intergenic |
TACCTGTATCAGATGGTTCA+CGG | 0.511896 | 8_2:-13299094 | None:intergenic |
CTGCTGCTTACAAAACCAAC+TGG | 0.511913 | 8_2:+13303626 | Msa1235340:CDS |
GATCCAAGAATCCACAAGCC+AGG | 0.513956 | 8_2:+13300808 | Msa1235340:CDS |
CTTGCTCCTAGTTCTGGACC+TGG | 0.515196 | 8_2:+13305455 | Msa1235340:CDS |
GTACGGCACCGTCTAGGGTA+TGG | 0.515752 | 8_2:-13299068 | None:intergenic |
CTACCCGATGATACACCTGC+TGG | 0.515885 | 8_2:+13298879 | Msa1235340:CDS |
GGTGTATCATCGGGTAGATA+AGG | 0.517991 | 8_2:-13298873 | None:intergenic |
GTTGATGGCCTTTATAGTGT+TGG | 0.523396 | 8_2:+13300716 | Msa1235340:CDS |
CTTAAGGATACCCTGGCTTG+TGG | 0.525590 | 8_2:-13300819 | None:intergenic |
ATCTCCATGGCATAGCGACC+AGG | 0.526081 | 8_2:-13303598 | None:intergenic |
GACCTGGTGTTACATGCAGA+GGG | 0.527475 | 8_2:+13305471 | Msa1235340:CDS |
TGGAGAAATGAAAGAAGAAG+TGG | 0.529072 | 8_2:-13296928 | None:intergenic |
GGTATTAATCTTCTCATCAA+CGG | 0.530886 | 8_2:-13305122 | None:intergenic |
ATATGAAACTTGTATATTCA+GGG | 0.530940 | 8_2:-13305157 | None:intergenic |
TTTGCCCGTCAAGCAATAGC+TGG | 0.532353 | 8_2:+13301964 | Msa1235340:CDS |
CTTACCAATGGTGGGCAAGT+TGG | 0.533372 | 8_2:-13303021 | None:intergenic |
ATCCCAGCAGGTGTATCATC+GGG | 0.533446 | 8_2:-13298882 | None:intergenic |
CACTCCTGGTCGCTATGCCA+TGG | 0.533642 | 8_2:+13303594 | Msa1235340:CDS |
TGTTTGGTCCAGATGGAGGC+AGG | 0.533655 | 8_2:-13302898 | None:intergenic |
ATTTCAGATCCTCCAAGAGT+TGG | 0.535524 | 8_2:-13299041 | None:intergenic |
CCGATATGAAAGACGAATCA+TGG | 0.537046 | 8_2:+13304970 | Msa1235340:CDS |
CTTGCTAGACCAACTCTTGG+AGG | 0.537115 | 8_2:+13299032 | Msa1235340:CDS |
CAACAACCTTCGATTTGGAC+AGG | 0.537155 | 8_2:+13305299 | Msa1235340:CDS |
TAATTATTACCTGTATCAGA+TGG | 0.538174 | 8_2:-13299101 | None:intergenic |
TTGGCACGTACCCTCCATAA+GGG | 0.539174 | 8_2:-13305091 | None:intergenic |
GATTACCCTTATGCAGAAGA+TGG | 0.539224 | 8_2:+13304816 | Msa1235340:CDS |
TTGTTAGGGCCATGAATCAA+AGG | 0.539424 | 8_2:-13297026 | None:intergenic |
GAAAGGATCAATGCCTTGGA+TGG | 0.543205 | 8_2:+13302797 | Msa1235340:CDS |
GTAACACCAGGTCCAGAACT+AGG | 0.543782 | 8_2:-13305461 | None:intergenic |
TTGCTAACAATGTGAGGCAA+TGG | 0.546196 | 8_2:-13300785 | None:intergenic |
TTGATAGTAGGAATGGTGAT+AGG | 0.548139 | 8_2:+13305387 | Msa1235340:CDS |
CTTGGTATATACATAGGAAG+TGG | 0.550676 | 8_2:-13300560 | None:intergenic |
TCCACACATGAGGTACACTT+TGG | 0.551392 | 8_2:+13303510 | Msa1235340:CDS |
GGAATGGTGATAGGAATTTG+AGG | 0.553948 | 8_2:+13305396 | Msa1235340:CDS |
GAACAGTGAGAAATGGTTAG+TGG | 0.555931 | 8_2:-13296906 | None:intergenic |
GGACCTGGTGTTACATGCAG+AGG | 0.558911 | 8_2:+13305470 | Msa1235340:CDS |
AATCCCAGCAGGTGTATCAT+CGG | 0.559593 | 8_2:-13298883 | None:intergenic |
ACCTGCGGATGAGATCTTGA+GGG | 0.562889 | 8_2:-13303669 | None:intergenic |
GGCCAGTACGGCACCGTCTA+GGG | 0.564885 | 8_2:-13299073 | None:intergenic |
GATCGAGTGTTTGGTCCAGA+TGG | 0.566962 | 8_2:-13302905 | None:intergenic |
TTAGTAGTTGCATCTAAAGC+AGG | 0.568173 | 8_2:-13302944 | None:intergenic |
GTTGATGAGAAGATTAATAC+CGG | 0.571822 | 8_2:+13305124 | Msa1235340:CDS |
TCCCTCAAGATCTCATCCGC+AGG | 0.574537 | 8_2:+13303668 | Msa1235340:CDS |
GGATCTAATTTACTAACAGG+TGG | 0.574715 | 8_2:-13302024 | None:intergenic |
GTGCAGAGGATAAATTTGCT+TGG | 0.574838 | 8_2:+13301926 | Msa1235340:intron |
GATCTAATTTACTAACAGGT+GGG | 0.574850 | 8_2:-13302023 | None:intergenic |
AATCTGAGAGGTGATGGAAA+AGG | 0.575229 | 8_2:+13298933 | Msa1235340:CDS |
ATTATTAGCTTTAGGCCATG+TGG | 0.576204 | 8_2:-13304789 | None:intergenic |
GAAAACTGTAAGTCTCTCAA+TGG | 0.578316 | 8_2:-13302001 | None:intergenic |
ATCCTGGTCAAAACGCCAGT+TGG | 0.579614 | 8_2:-13303641 | None:intergenic |
AAATGTATCCATACCCTAGA+CGG | 0.586694 | 8_2:+13299060 | Msa1235340:CDS |
ATCCAAGAATCCACAAGCCA+GGG | 0.589581 | 8_2:+13300809 | Msa1235340:CDS |
TACCCGATGATACACCTGCT+GGG | 0.591254 | 8_2:+13298880 | Msa1235340:CDS |
TTTGGACAGTACCCTTATGG+AGG | 0.594124 | 8_2:+13305080 | Msa1235340:CDS |
TACCTGCGGATGAGATCTTG+AGG | 0.594715 | 8_2:-13303670 | None:intergenic |
CAGATGGTTCACGGCCAGTA+CGG | 0.595137 | 8_2:-13299085 | None:intergenic |
AGCAGCAGAACTAATCTCCA+TGG | 0.597060 | 8_2:-13303611 | None:intergenic |
TTGGACAGTACCCTTATGGA+GGG | 0.597254 | 8_2:+13305081 | Msa1235340:CDS |
TGGATCTTGCTAACAATGTG+AGG | 0.598996 | 8_2:-13300791 | None:intergenic |
GTATGCTTGCTTACCAATGG+TGG | 0.599350 | 8_2:-13303030 | None:intergenic |
GCATCACCTGTCCAAATCGA+AGG | 0.600030 | 8_2:-13305305 | None:intergenic |
AAGGTGATTGATAGTAGGAA+TGG | 0.600577 | 8_2:+13305380 | Msa1235340:CDS |
CAGAGCTTGATCAATGCAGA+TGG | 0.602184 | 8_2:+13303553 | Msa1235340:CDS |
ATATTACTAGTAGACATTGG+TGG | 0.606826 | 8_2:+13305658 | Msa1235340:three_prime_UTR |
TGTCATACTTAAGGATACCC+TGG | 0.608790 | 8_2:-13300826 | None:intergenic |
TAAATATTACTAGTAGACAT+TGG | 0.610626 | 8_2:+13305655 | Msa1235340:three_prime_UTR |
TCCAAAGTGTACCTCATGTG+TGG | 0.612282 | 8_2:-13303511 | None:intergenic |
CTAGGAGCAAGTAATTCATA+CGG | 0.613547 | 8_2:-13305443 | None:intergenic |
CGAGTGTTTGGTCCAGATGG+AGG | 0.614080 | 8_2:-13302902 | None:intergenic |
GCCCTAACAAAAGAATTCAT+GGG | 0.614296 | 8_2:+13297039 | Msa1235340:CDS |
TTTAAATGGTACCTCTTGGA+CGG | 0.616838 | 8_2:-13302115 | None:intergenic |
ACCCCTCTGCATGTAACACC+AGG | 0.617716 | 8_2:-13305473 | None:intergenic |
ATGCAACTACTAATTGGGTG+TGG | 0.623131 | 8_2:+13302954 | Msa1235340:CDS |
ACGAAGAGTATTTAGGTGAG+AGG | 0.628094 | 8_2:+13305276 | Msa1235340:CDS |
ATGACAGAGAGTTACAAGCT+TGG | 0.632533 | 8_2:+13304919 | Msa1235340:CDS |
GAAATGGTTAGTGGTCGTGT+CGG | 0.639946 | 8_2:-13296897 | None:intergenic |
TACTCCGAATCAATCAATGT+AGG | 0.641645 | 8_2:+13304942 | Msa1235340:CDS |
GCAAAACACCAGCACCGCAA+CGG | 0.641663 | 8_2:-13305421 | None:intergenic |
GCTTGAACCCAAGAATTGCA+AGG | 0.647001 | 8_2:-13297797 | None:intergenic |
GGAAATTGGAAAGATTGAGA+AGG | 0.652309 | 8_2:+13305361 | Msa1235340:CDS |
AGGAATTTGAGGAACCGTTG+CGG | 0.653263 | 8_2:+13305407 | Msa1235340:CDS |
TATGCTTGCTTACCAATGGT+GGG | 0.656904 | 8_2:-13303029 | None:intergenic |
TATTACTTGTGAGAGTCGTG+TGG | 0.661476 | 8_2:+13300532 | Msa1235340:CDS |
ATTAAGTGCAGCATGTTGCG+CGG | 0.662601 | 8_2:-13305057 | None:intergenic |
TAATGGCATGACCGTCCAAG+AGG | 0.670114 | 8_2:+13302104 | Msa1235340:CDS |
TGCGGATGAGATCTTGAGGG+AGG | 0.673318 | 8_2:-13303666 | None:intergenic |
AGTGAGGAACAAGATCAAAG+AGG | 0.677524 | 8_2:+13297323 | Msa1235340:CDS |
AGTTATTGGATCCACACATG+AGG | 0.685129 | 8_2:+13303500 | Msa1235340:CDS |
ATTCGTCTTTCATATCGGCG+TGG | 0.688334 | 8_2:-13304965 | None:intergenic |
CCTGACCCAACACAACCACA+TGG | 0.695024 | 8_2:+13304774 | Msa1235340:CDS |
ACCTGGTGTTACATGCAGAG+GGG | 0.702111 | 8_2:+13305472 | Msa1235340:CDS |
AGTAATAGTTCACATAAGTG+CGG | 0.704279 | 8_2:-13304872 | None:intergenic |
ATTAATCTTCTCATCAACGG+GGG | 0.724917 | 8_2:-13305119 | None:intergenic |
TATTAATCTTCTCATCAACG+GGG | 0.754646 | 8_2:-13305120 | None:intergenic |
ATATGAAAGACGAATCATGG+TGG | 0.755805 | 8_2:+13304973 | Msa1235340:CDS |
ACAGGCTTTAGAGTACCAAG+TGG | 0.757581 | 8_2:-13302860 | None:intergenic |
TTAGAGCTGTTGTAACAGTG+AGG | 0.760433 | 8_2:+13297307 | Msa1235340:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | GATTTTGATAATTAAATTAT+TGG | + | chr8_2:13297534-13297553 | Msa1235340:intron | 10.0% |
!!! | AAAGTTTTTTTTTTGAAATA+AGG | + | chr8_2:13298034-13298053 | Msa1235340:intron | 10.0% |
!!! | AATAACATTCAATATTTTTA+CGG | - | chr8_2:13298142-13298161 | None:intergenic | 10.0% |
!! | TAACAATAATTATAAAATCA+CGG | - | chr8_2:13298198-13298217 | None:intergenic | 10.0% |
!! | TTTATTAGATTAAATTAAAG+TGG | + | chr8_2:13298478-13298497 | Msa1235340:intron | 10.0% |
!! | TTATTAGATTAAATTAAAGT+GGG | + | chr8_2:13298479-13298498 | Msa1235340:intron | 10.0% |
!! | TATTTGTATAAATTTACATT+AGG | - | chr8_2:13298703-13298722 | None:intergenic | 10.0% |
!! | AATTTATACAAATAATAAAG+TGG | + | chr8_2:13298709-13298728 | Msa1235340:intron | 10.0% |
!! | AAATAGTTATAATTCAAATA+AGG | - | chr8_2:13299458-13299477 | None:intergenic | 10.0% |
!!! | TTTTTTATATATAAAAGGAA+TGG | - | chr8_2:13301525-13301544 | None:intergenic | 10.0% |
!! | ATATATAAAAAAATTACAAC+TGG | + | chr8_2:13301533-13301552 | Msa1235340:intron | 10.0% |
!! | TATATAAAAAAATTACAACT+GGG | + | chr8_2:13301534-13301553 | Msa1235340:intron | 10.0% |
!! | AGTAATAATTAATAACAAAT+TGG | - | chr8_2:13301560-13301579 | None:intergenic | 10.0% |
!! | AAAAAATGTATAATAAATAG+GGG | - | chr8_2:13303813-13303832 | None:intergenic | 10.0% |
!! | GAAAAAAATGTATAATAAAT+AGG | - | chr8_2:13303815-13303834 | None:intergenic | 10.0% |
!! | TTAGAAAATATAACAATTGA+AGG | + | chr8_2:13297749-13297768 | Msa1235340:CDS | 15.0% |
!!! | CCACTTTATTTTTTTATTTA+GGG | - | chr8_2:13298742-13298761 | None:intergenic | 15.0% |
!!! | ACCACTTTATTTTTTTATTT+AGG | - | chr8_2:13298743-13298762 | None:intergenic | 15.0% |
!! | CTAATAAAAAATTATTGTGA+AGG | - | chr8_2:13299408-13299427 | None:intergenic | 15.0% |
!!! | AATTTTTTATTTTAATCACG+TGG | + | chr8_2:13299512-13299531 | Msa1235340:intron | 15.0% |
!! | TTGGAAAATCAAAAATTAAA+TGG | + | chr8_2:13299612-13299631 | Msa1235340:intron | 15.0% |
!!! | TACAAATCAATTTGATTTTA+AGG | + | chr8_2:13300256-13300275 | Msa1235340:intron | 15.0% |
!! | ATAATTAAGCAAAATTGAAT+TGG | + | chr8_2:13300496-13300515 | Msa1235340:intron | 15.0% |
!!! | TTTTGAGATATAATTTTCTT+AGG | + | chr8_2:13301137-13301156 | Msa1235340:intron | 15.0% |
!!! | TTTGAGATATAATTTTCTTA+GGG | + | chr8_2:13301138-13301157 | Msa1235340:intron | 15.0% |
!!! | TTTAGAAATTTTATACAAAG+AGG | - | chr8_2:13301192-13301211 | None:intergenic | 15.0% |
!! | TATAAAGACATAATTCAATT+TGG | - | chr8_2:13301225-13301244 | None:intergenic | 15.0% |
!! | AAATATTCCTTTAATGTAAT+TGG | - | chr8_2:13301287-13301306 | None:intergenic | 15.0% |
!! | AACTGTTGATATAAAAATTA+AGG | + | chr8_2:13301665-13301684 | Msa1235340:intron | 15.0% |
!!! | AAACAAGAACTTTAATTTTT+GGG | - | chr8_2:13301870-13301889 | None:intergenic | 15.0% |
!!! | TAAACAAGAACTTTAATTTT+TGG | - | chr8_2:13301871-13301890 | None:intergenic | 15.0% |
!!! | GAGAAATATGTTTATTTTTA+AGG | - | chr8_2:13302265-13302284 | None:intergenic | 15.0% |
!! | AAAAATAAACATATTTCTCA+TGG | + | chr8_2:13302266-13302285 | Msa1235340:intron | 15.0% |
!!! | TTTCTTTAAAATCAAGTTAT+AGG | - | chr8_2:13302578-13302597 | None:intergenic | 15.0% |
!! | AAAGAAATAATTAATGTAGT+TGG | - | chr8_2:13303781-13303800 | None:intergenic | 15.0% |
!!! | AACTCTAAAGTTTAAAATAA+GGG | + | chr8_2:13304177-13304196 | Msa1235340:intron | 15.0% |
!! | TAATATTTACAATTTCTCTT+AGG | - | chr8_2:13304314-13304333 | None:intergenic | 15.0% |
!!! | GTTTTATATATATACAAGTG+AGG | - | chr8_2:13296848-13296867 | None:intergenic | 20.0% |
!! | AACAAAAAAACCTTAAAAGA+AGG | + | chr8_2:13296984-13297003 | Msa1235340:five_prime_UTR | 20.0% |
!!! | GATTTTTTTTCCTTCTTTTA+AGG | - | chr8_2:13296997-13297016 | None:intergenic | 20.0% |
!!! | GAGAATTTTCTTTTCTAATA+AGG | + | chr8_2:13297841-13297860 | Msa1235340:CDS | 20.0% |
!!! | CTACTTTTTTTTTTCTTACT+GGG | - | chr8_2:13297935-13297954 | None:intergenic | 20.0% |
!!! | ACTACTTTTTTTTTTCTTAC+TGG | - | chr8_2:13297936-13297955 | None:intergenic | 20.0% |
!!! | ATTTGACTATATGATTTTCT+AGG | - | chr8_2:13298282-13298301 | None:intergenic | 20.0% |
!! | TATAGTCAAATTTATGCATA+TGG | + | chr8_2:13298291-13298310 | Msa1235340:intron | 20.0% |
!! | TCGAAAAATAAAGATAAAGA+GGG | - | chr8_2:13298430-13298449 | None:intergenic | 20.0% |
!! | CCCTAAATAAAAAAATAAAG+TGG | + | chr8_2:13298739-13298758 | Msa1235340:intron | 20.0% |
!!! | ATATTCTTTTCGAAATAAAG+TGG | + | chr8_2:13298810-13298829 | Msa1235340:intron | 20.0% |
!!! | AAACTATATTTCTATCCTTT+AGG | + | chr8_2:13299191-13299210 | Msa1235340:intron | 20.0% |
!!! | AACTATATTTCTATCCTTTA+GGG | + | chr8_2:13299192-13299211 | Msa1235340:intron | 20.0% |
!!! | AAGGAACTTTTTTAAAATCA+AGG | - | chr8_2:13299389-13299408 | None:intergenic | 20.0% |
!!! | GTATTTAAAGTTATATCTTG+TGG | + | chr8_2:13300022-13300041 | Msa1235340:intron | 20.0% |
!!! | TTTGATGTATTTTCTAACAT+AGG | + | chr8_2:13300296-13300315 | Msa1235340:intron | 20.0% |
!!! | ATTTGCTTGCTAAATAAATT+TGG | + | chr8_2:13300904-13300923 | Msa1235340:intron | 20.0% |
!!! | TCTTTTCATAAGTAAATCTT+TGG | + | chr8_2:13300949-13300968 | Msa1235340:intron | 20.0% |
!! | ATTCCATTATAGAATATTCA+TGG | - | chr8_2:13301358-13301377 | None:intergenic | 20.0% |
!! | ACAAGTTAAGAATCTAAAAA+TGG | - | chr8_2:13301822-13301841 | None:intergenic | 20.0% |
!!! | CACATTTTAAATCAACTTAA+TGG | + | chr8_2:13302087-13302106 | Msa1235340:CDS | 20.0% |
!!! | AAGTTTTTGAATGCTTTAAA+TGG | - | chr8_2:13302132-13302151 | None:intergenic | 20.0% |
!!! | TTCAAAAACTTTTTCCTTTT+TGG | + | chr8_2:13302141-13302160 | Msa1235340:intron | 20.0% |
!!! | TGTTTATTTTTAAGGTACAT+GGG | - | chr8_2:13302257-13302276 | None:intergenic | 20.0% |
!!! | ATGTTTATTTTTAAGGTACA+TGG | - | chr8_2:13302258-13302277 | None:intergenic | 20.0% |
!! | ACTTGACATCAAATTTATAA+TGG | + | chr8_2:13302301-13302320 | Msa1235340:intron | 20.0% |
!! | ATTTGGATACTTTAAACAAA+TGG | + | chr8_2:13302358-13302377 | Msa1235340:intron | 20.0% |
!! | ATGCAACTTAAATACTAAAT+TGG | + | chr8_2:13303316-13303335 | Msa1235340:intron | 20.0% |
!!! | TTTCTTTGCTTATTTTTTCT+CGG | + | chr8_2:13303385-13303404 | Msa1235340:intron | 20.0% |
!! | GACAAAAAAAATTCTCAAAA+GGG | - | chr8_2:13303731-13303750 | None:intergenic | 20.0% |
!!! | GTTTTTACATTTTTATCCTT+AGG | - | chr8_2:13303886-13303905 | None:intergenic | 20.0% |
!!! | TATTTTAAACTTTAGAGTTG+AGG | - | chr8_2:13304176-13304195 | None:intergenic | 20.0% |
!!! | CAACTCTAAAGTTTAAAATA+AGG | + | chr8_2:13304176-13304195 | Msa1235340:intron | 20.0% |
!! | TATCAAAATATAATTGAGGA+GGG | - | chr8_2:13304291-13304310 | None:intergenic | 20.0% |
!! | TAGGTATCAAAATATAATTG+AGG | - | chr8_2:13304295-13304314 | None:intergenic | 20.0% |
!!! | TTTCTTTTATGATTTGTTTG+AGG | + | chr8_2:13304337-13304356 | Msa1235340:intron | 20.0% |
!!! | AAACTAAGTTGAATGTAAAA+TGG | - | chr8_2:13304580-13304599 | None:intergenic | 20.0% |
!!! | TAATTGATGTTTGCTTTATT+TGG | + | chr8_2:13304684-13304703 | Msa1235340:intron | 20.0% |
!!! | TTTTCACTTTTTAACATTTC+AGG | + | chr8_2:13304739-13304758 | Msa1235340:intron | 20.0% |
!!! | TTTCACTTTTTAACATTTCA+GGG | + | chr8_2:13304740-13304759 | Msa1235340:intron | 20.0% |
!!! | AATCTTTCATTATTAGCTTT+AGG | - | chr8_2:13304800-13304819 | None:intergenic | 20.0% |
!! | ATATGAAACTTGTATATTCA+GGG | - | chr8_2:13305160-13305179 | None:intergenic | 20.0% |
!!! | CTTAAGACTTTTTTTTTATG+TGG | - | chr8_2:13305513-13305532 | None:intergenic | 20.0% |
!! | TAAATATTACTAGTAGACAT+TGG | + | chr8_2:13305655-13305674 | Msa1235340:three_prime_UTR | 20.0% |
!!! | TTTGTTGATTTCTATGAAGA+AGG | - | chr8_2:13296970-13296989 | None:intergenic | 25.0% |
! | TGAAAAACCAGTGAAATTTA+AGG | + | chr8_2:13297284-13297303 | Msa1235340:CDS | 25.0% |
! | GTCAAAGAAGACTAATATTA+AGG | + | chr8_2:13297628-13297647 | Msa1235340:CDS | 25.0% |
! | TAATTACACAGCTGAATTTA+CGG | + | chr8_2:13297661-13297680 | Msa1235340:CDS | 25.0% |
!!! | TTTTTTCAACGTGAGAAATA+AGG | + | chr8_2:13298002-13298021 | Msa1235340:intron | 25.0% |
!!! | TGTTTTGAAGAATCTTGAAA+AGG | + | chr8_2:13298090-13298109 | Msa1235340:intron | 25.0% |
!! | TTTACGGTAAAATGAACTTT+TGG | - | chr8_2:13298126-13298145 | None:intergenic | 25.0% |
! | ATTAGTATATCACTTTATCG+TGG | - | chr8_2:13298249-13298268 | None:intergenic | 25.0% |
! | ACTACTAGTATTCAATTCAA+CGG | - | chr8_2:13298374-13298393 | None:intergenic | 25.0% |
! | CTCGAAAAATAAAGATAAAG+AGG | - | chr8_2:13298431-13298450 | None:intergenic | 25.0% |
! | TAATTATTACCTGTATCAGA+TGG | - | chr8_2:13299104-13299123 | None:intergenic | 25.0% |
! | AATAGATTTGATGTAGTGTT+TGG | + | chr8_2:13299296-13299315 | Msa1235340:intron | 25.0% |
!!! | TTTTTATTTTAATCACGTGG+TGG | + | chr8_2:13299515-13299534 | Msa1235340:intron | 25.0% |
!!! | TTTTATTTTAATCACGTGGT+GGG | + | chr8_2:13299516-13299535 | Msa1235340:intron | 25.0% |
! | AAGAGAGAATAAATATGACT+GGG | - | chr8_2:13299690-13299709 | None:intergenic | 25.0% |
!!! | CTATCATACTTTTTTTCCAA+GGG | - | chr8_2:13300190-13300209 | None:intergenic | 25.0% |
! | TAATATGTTACTATGCTTTG+TGG | + | chr8_2:13300464-13300483 | Msa1235340:intron | 25.0% |
! | TTAAGCAAAATTGAATTGGA+TGG | + | chr8_2:13300500-13300519 | Msa1235340:intron | 25.0% |
!! | ATTTCTGCATTACTGAATTT+TGG | + | chr8_2:13301040-13301059 | Msa1235340:intron | 25.0% |
!! | TTTCTGCATTACTGAATTTT+GGG | + | chr8_2:13301041-13301060 | Msa1235340:intron | 25.0% |
! | AGAATGAATTAACAAGTCAT+TGG | + | chr8_2:13301090-13301109 | Msa1235340:intron | 25.0% |
!! | AGAGGAAATTTTCTAAATGA+CGG | - | chr8_2:13301174-13301193 | None:intergenic | 25.0% |
! | GTAATTGGTACATGATTTAA+AGG | - | chr8_2:13301272-13301291 | None:intergenic | 25.0% |
! | TCATGTACCAATTACATTAA+AGG | + | chr8_2:13301277-13301296 | Msa1235340:intron | 25.0% |
!! | AACTGAAAACTCATCTTTTT+GGG | - | chr8_2:13301476-13301495 | None:intergenic | 25.0% |
!! | CAACAAAATGTTTCTATCTT+TGG | - | chr8_2:13301730-13301749 | None:intergenic | 25.0% |
!! | CAAAGATAGAAACATTTTGT+TGG | + | chr8_2:13301728-13301747 | Msa1235340:intron | 25.0% |
! | AAATTAGATCCTGAAATCTA+TGG | + | chr8_2:13302036-13302055 | Msa1235340:CDS | 25.0% |
! | GTTTGAAAAAACAATTCACA+AGG | - | chr8_2:13302212-13302231 | None:intergenic | 25.0% |
! | TACATGGGAAATGTTATAAT+TGG | - | chr8_2:13302242-13302261 | None:intergenic | 25.0% |
! | GGAGAAAAATCAGTTAAAAA+TGG | + | chr8_2:13302483-13302502 | Msa1235340:intron | 25.0% |
!! | AATTTTTGTTGGAACCTATT+GGG | - | chr8_2:13302525-13302544 | None:intergenic | 25.0% |
!! | TAATTTTTGTTGGAACCTAT+TGG | - | chr8_2:13302526-13302545 | None:intergenic | 25.0% |
!! | TTAACAGTGGTAATTTTTGT+TGG | - | chr8_2:13302536-13302555 | None:intergenic | 25.0% |
! | ACAAAAATTACCACTGTTAA+AGG | + | chr8_2:13302536-13302555 | Msa1235340:intron | 25.0% |
! | TTTAGATGCAACTACTAATT+GGG | + | chr8_2:13302949-13302968 | Msa1235340:CDS | 25.0% |
!! | CACTTGTCACATAAAATTTT+AGG | - | chr8_2:13303091-13303110 | None:intergenic | 25.0% |
! | TTTCACATGAAAGACATATT+TGG | - | chr8_2:13303213-13303232 | None:intergenic | 25.0% |
!! | TTCTCGGTGAATTTTTATAT+AGG | + | chr8_2:13303401-13303420 | Msa1235340:intron | 25.0% |
! | TAGTATATGATATTTACCTG+CGG | - | chr8_2:13303687-13303706 | None:intergenic | 25.0% |
!! | TCAAAAGGGTCTTATAATTA+GGG | - | chr8_2:13303717-13303736 | None:intergenic | 25.0% |
! | GGACAAAAAAAATTCTCAAA+AGG | - | chr8_2:13303732-13303751 | None:intergenic | 25.0% |
! | TACGATTCTTTGCAATATTA+AGG | + | chr8_2:13304240-13304259 | Msa1235340:intron | 25.0% |
! | GTATCAAAATATAATTGAGG+AGG | - | chr8_2:13304292-13304311 | None:intergenic | 25.0% |
! | TTATATGTTTGAGTGCATTT+CGG | + | chr8_2:13304425-13304444 | Msa1235340:intron | 25.0% |
! | AATGTAAAATGGTTTACGTT+TGG | - | chr8_2:13304569-13304588 | None:intergenic | 25.0% |
!!! | TAGGTGTGTATTTGATTTTA+TGG | - | chr8_2:13304625-13304644 | None:intergenic | 25.0% |
!!! | TACATGTTAAGAAAAGTGTT+GGG | - | chr8_2:13304666-13304685 | None:intergenic | 25.0% |
!! | TTACATGTTAAGAAAAGTGT+TGG | - | chr8_2:13304667-13304686 | None:intergenic | 25.0% |
!!! | TTCACTTTTTAACATTTCAG+GGG | + | chr8_2:13304741-13304760 | Msa1235340:intron | 25.0% |
! | AAATTAAGATTGTTAGGACT+TGG | - | chr8_2:13305028-13305047 | None:intergenic | 25.0% |
! | AAGTCCTAACAATCTTAATT+TGG | + | chr8_2:13305027-13305046 | Msa1235340:CDS | 25.0% |
! | CATTCCAAATTAAGATTGTT+AGG | - | chr8_2:13305034-13305053 | None:intergenic | 25.0% |
! | GATATGAAACTTGTATATTC+AGG | - | chr8_2:13305161-13305180 | None:intergenic | 25.0% |
!! | TCGGTTTTAATGTAAATAGC+TGG | - | chr8_2:13296881-13296900 | None:intergenic | 30.0% |
TCTTTCATTTCTCCAAACAT+AGG | + | chr8_2:13296936-13296955 | Msa1235340:five_prime_UTR | 30.0% | |
!!! | AAGGTTTTGTTTCCTATGTT+TGG | - | chr8_2:13296951-13296970 | None:intergenic | 30.0% |
TCAAAGAAACCTTTGATTCA+TGG | + | chr8_2:13297017-13297036 | Msa1235340:exon | 30.0% | |
! | ACCCATGAATTCTTTTGTTA+GGG | - | chr8_2:13297043-13297062 | None:intergenic | 30.0% |
! | AACCCATGAATTCTTTTGTT+AGG | - | chr8_2:13297044-13297063 | None:intergenic | 30.0% |
TTTCCATAAGGAACAAAAAC+AGG | - | chr8_2:13297144-13297163 | None:intergenic | 30.0% | |
!! | ACAACTCTTTTGTTTCCATA+AGG | - | chr8_2:13297156-13297175 | None:intergenic | 30.0% |
ATGGAAACAAAAGAGTTGTA+AGG | + | chr8_2:13297157-13297176 | Msa1235340:CDS | 30.0% | |
GAAGATGATGATATAGAAGA+AGG | - | chr8_2:13297249-13297268 | None:intergenic | 30.0% | |
! | ATCTTGATGCTTTTACTGAT+AGG | + | chr8_2:13297370-13297389 | Msa1235340:CDS | 30.0% |
CACTAAAGAAAAGTCTTACT+TGG | - | chr8_2:13297441-13297460 | None:intergenic | 30.0% | |
!! | TTTACGGTTGACTCAAATTT+TGG | + | chr8_2:13297677-13297696 | Msa1235340:CDS | 30.0% |
! | TTCATTTTCCTTGCAATTCT+TGG | + | chr8_2:13297789-13297808 | Msa1235340:CDS | 30.0% |
! | TCATTTTCCTTGCAATTCTT+GGG | + | chr8_2:13297790-13297809 | Msa1235340:CDS | 30.0% |
GAAAAGAAAATTCTCTTTCC+AGG | - | chr8_2:13297836-13297855 | None:intergenic | 30.0% | |
ATTTATCTGTCATCAGAACA+TGG | + | chr8_2:13297909-13297928 | Msa1235340:intron | 30.0% | |
GGTGAAAATTGAAAGTTGAA+AGG | + | chr8_2:13298055-13298074 | Msa1235340:intron | 30.0% | |
ACTAGTACTAGTAGTCTTTA+TGG | + | chr8_2:13298625-13298644 | Msa1235340:intron | 30.0% | |
TAAATGCTGAATAATGCCAA+GGG | - | chr8_2:13298680-13298699 | None:intergenic | 30.0% | |
TATGACACATACAATGATCT+TGG | + | chr8_2:13298987-13299006 | Msa1235340:CDS | 30.0% | |
CAAGATCAATTCCTTTATCT+GGG | - | chr8_2:13299016-13299035 | None:intergenic | 30.0% | |
ATTGCATTGTATCCTTTAGT+AGG | + | chr8_2:13299163-13299182 | Msa1235340:intron | 30.0% | |
TTGCATTGTATCCTTTAGTA+GGG | + | chr8_2:13299164-13299183 | Msa1235340:intron | 30.0% | |
ATAGTTTAACACCCTACTAA+AGG | - | chr8_2:13299178-13299197 | None:intergenic | 30.0% | |
TGTGAAACACATGAAACAAA+AGG | + | chr8_2:13299583-13299602 | Msa1235340:intron | 30.0% | |
GTGAAACACATGAAACAAAA+GGG | + | chr8_2:13299584-13299603 | Msa1235340:intron | 30.0% | |
ATGAAACAAAAGGGCAATAT+TGG | + | chr8_2:13299593-13299612 | Msa1235340:intron | 30.0% | |
!!! | ATGTTTTTTTCTTCTCTCCA+AGG | - | chr8_2:13299661-13299680 | None:intergenic | 30.0% |
GAGAGAAGAAAAAAACATGT+GGG | + | chr8_2:13299663-13299682 | Msa1235340:intron | 30.0% | |
GAAGAGAGAATAAATATGAC+TGG | - | chr8_2:13299691-13299710 | None:intergenic | 30.0% | |
TACAATGACATTTGATACGA+TGG | + | chr8_2:13300084-13300103 | Msa1235340:intron | 30.0% | |
!!! | GCTATCATACTTTTTTTCCA+AGG | - | chr8_2:13300191-13300210 | None:intergenic | 30.0% |
! | GGAAAAAAAGTATGATAGCT+TGG | + | chr8_2:13300192-13300211 | Msa1235340:intron | 30.0% |
TCATCTCTTGGTATATACAT+AGG | - | chr8_2:13300569-13300588 | None:intergenic | 30.0% | |
! | CACTGAAAATGTGTTCATTT+TGG | - | chr8_2:13300606-13300625 | None:intergenic | 30.0% |
AATGAATTCTCAGATGTTGA+TGG | + | chr8_2:13300701-13300720 | Msa1235340:CDS | 30.0% | |
CACTCACTTGATATAATCTT+GGG | - | chr8_2:13300854-13300873 | None:intergenic | 30.0% | |
GGAGAATCAAAATTGTGAAT+CGG | - | chr8_2:13301001-13301020 | None:intergenic | 30.0% | |
TGAATTAACAAGTCATTGGA+TGG | + | chr8_2:13301094-13301113 | Msa1235340:intron | 30.0% | |
TGGCCATGAATATTCTATAA+TGG | + | chr8_2:13301352-13301371 | Msa1235340:intron | 30.0% | |
! | TGTAGCACTATCTTTTCATA+TGG | - | chr8_2:13301390-13301409 | None:intergenic | 30.0% |
! | GAACTGAAAACTCATCTTTT+TGG | - | chr8_2:13301477-13301496 | None:intergenic | 30.0% |
ACAATTGATTAGTACAGCTT+TGG | - | chr8_2:13301607-13301626 | None:intergenic | 30.0% | |
AAATTTATCCTCTGCACATT+AGG | - | chr8_2:13301923-13301942 | None:intergenic | 30.0% | |
GATCTAATTTACTAACAGGT+GGG | - | chr8_2:13302026-13302045 | None:intergenic | 30.0% | |
TCAGGATCTAATTTACTAAC+AGG | - | chr8_2:13302030-13302049 | None:intergenic | 30.0% | |
ATGAATGCATTGTACCAAAA+AGG | - | chr8_2:13302158-13302177 | None:intergenic | 30.0% | |
TCAGAGATTTGACTAAAGTT+AGG | + | chr8_2:13302381-13302400 | Msa1235340:intron | 30.0% | |
CAGAGATTTGACTAAAGTTA+GGG | + | chr8_2:13302382-13302401 | Msa1235340:intron | 30.0% | |
TAAAAATGGCGAATCTATCA+TGG | + | chr8_2:13302497-13302516 | Msa1235340:intron | 30.0% | |
CCAAAAGAAGAAAAGAAAGT+GGG | - | chr8_2:13302707-13302726 | None:intergenic | 30.0% | |
TCCAAAAGAAGAAAAGAAAG+TGG | - | chr8_2:13302708-13302727 | None:intergenic | 30.0% | |
!!! | TTCTTCTTTTGGAATTTTGC+AGG | + | chr8_2:13302715-13302734 | Msa1235340:intron | 30.0% |
! | TGATATCTACCTTCCATTTT+TGG | + | chr8_2:13302775-13302794 | Msa1235340:CDS | 30.0% |
! | ATATGATTTTCTACCATCCA+AGG | - | chr8_2:13302813-13302832 | None:intergenic | 30.0% |
! | AAGTGGTGTCAAAAAGTATA+TGG | - | chr8_2:13302846-13302865 | None:intergenic | 30.0% |
!! | ATATACTTTTTGACACCACT+TGG | + | chr8_2:13302845-13302864 | Msa1235340:CDS | 30.0% |
CTTTAGATGCAACTACTAAT+TGG | + | chr8_2:13302948-13302967 | Msa1235340:CDS | 30.0% | |
TGTATCAAATTGACATGTGT+CGG | + | chr8_2:13303184-13303203 | Msa1235340:intron | 30.0% | |
!! | TATTTAAGTTGCATGTGTCA+AGG | - | chr8_2:13303310-13303329 | None:intergenic | 30.0% |
CTATGAGCAGACAATATAAA+TGG | - | chr8_2:13303451-13303470 | None:intergenic | 30.0% | |
CATTTATATTGTCTGCTCAT+AGG | + | chr8_2:13303449-13303468 | Msa1235340:intron | 30.0% | |
!!! | GCATCCAATTTTCAAGTTAT+TGG | + | chr8_2:13303486-13303505 | Msa1235340:CDS | 30.0% |
GGATCCAATAACTTGAAAAT+TGG | - | chr8_2:13303493-13303512 | None:intergenic | 30.0% | |
! | CTCAAAAGGGTCTTATAATT+AGG | - | chr8_2:13303718-13303737 | None:intergenic | 30.0% |
ATGTAGTTGGAAATAGCAAA+GGG | - | chr8_2:13303768-13303787 | None:intergenic | 30.0% | |
AATGTAGTTGGAAATAGCAA+AGG | - | chr8_2:13303769-13303788 | None:intergenic | 30.0% | |
! | AGCAAAAGGGTCTTATATAT+AGG | + | chr8_2:13303964-13303983 | Msa1235340:intron | 30.0% |
! | GCAAAAGGGTCTTATATATA+GGG | + | chr8_2:13303965-13303984 | Msa1235340:intron | 30.0% |
!! | CTAGGATCTTTAAAACAAAG+CGG | - | chr8_2:13304023-13304042 | None:intergenic | 30.0% |
TTGGACAAATTCACATATAG+TGG | - | chr8_2:13304550-13304569 | None:intergenic | 30.0% | |
! | TTTTTAACATTTCAGGGGAA+TGG | + | chr8_2:13304746-13304765 | Msa1235340:intron | 30.0% |
TTTGGTCAGCAATAGAAAAT+TGG | + | chr8_2:13304847-13304866 | Msa1235340:CDS | 30.0% | |
TTGGTCAGCAATAGAAAATT+GGG | + | chr8_2:13304848-13304867 | Msa1235340:CDS | 30.0% | |
AGTAATAGTTCACATAAGTG+CGG | - | chr8_2:13304875-13304894 | None:intergenic | 30.0% | |
TGATAATTAGGCTTGGATTT+GGG | - | chr8_2:13304899-13304918 | None:intergenic | 30.0% | |
! | TTGATAATTAGGCTTGGATT+TGG | - | chr8_2:13304900-13304919 | None:intergenic | 30.0% |
! | ACTCTCTGTCATTGATAATT+AGG | - | chr8_2:13304911-13304930 | None:intergenic | 30.0% |
TATTAATCTTCTCATCAACG+GGG | - | chr8_2:13305123-13305142 | None:intergenic | 30.0% | |
GTATTAATCTTCTCATCAAC+GGG | - | chr8_2:13305124-13305143 | None:intergenic | 30.0% | |
GGTATTAATCTTCTCATCAA+CGG | - | chr8_2:13305125-13305144 | None:intergenic | 30.0% | |
! | GTTGATGAGAAGATTAATAC+CGG | + | chr8_2:13305124-13305143 | Msa1235340:CDS | 30.0% |
! | GCATTGAGAAAATACTTTTG+TGG | - | chr8_2:13305188-13305207 | None:intergenic | 30.0% |
GTTGCAAGCTACAAAATATA+TGG | + | chr8_2:13305220-13305239 | Msa1235340:CDS | 30.0% | |
! | AGCATTTTATCAATTCTCTG+CGG | + | chr8_2:13305340-13305359 | Msa1235340:CDS | 30.0% |
! | TTTTATGTGGACACACTATT+TGG | - | chr8_2:13305500-13305519 | None:intergenic | 30.0% |
! | TCACATTTTGCTAAGCATTA+TGG | + | chr8_2:13305557-13305576 | Msa1235340:three_prime_UTR | 30.0% |
! | ATTTTGCTAAGCATTATGGT+TGG | + | chr8_2:13305561-13305580 | Msa1235340:three_prime_UTR | 30.0% |
ATATTACTAGTAGACATTGG+TGG | + | chr8_2:13305658-13305677 | Msa1235340:three_prime_UTR | 30.0% | |
TGGAGAAATGAAAGAAGAAG+TGG | - | chr8_2:13296931-13296950 | None:intergenic | 35.0% | |
GCCCTAACAAAAGAATTCAT+GGG | + | chr8_2:13297039-13297058 | Msa1235340:CDS | 35.0% | |
AGAATTCATGGGTTCTTCAT+TGG | + | chr8_2:13297050-13297069 | Msa1235340:CDS | 35.0% | |
GGTGAAGAAGAAGGAAATAT+TGG | - | chr8_2:13297084-13297103 | None:intergenic | 35.0% | |
TGAAAACATGGTGAAGAAGA+AGG | - | chr8_2:13297093-13297112 | None:intergenic | 35.0% | |
CCATTCTTCTGTTGAAAACA+TGG | - | chr8_2:13297105-13297124 | None:intergenic | 35.0% | |
! | CCATGTTTTCAACAGAAGAA+TGG | + | chr8_2:13297102-13297121 | Msa1235340:CDS | 35.0% |
! | TGTTTTCAACAGAAGAATGG+TGG | + | chr8_2:13297105-13297124 | Msa1235340:CDS | 35.0% |
!!! | AGTCCTGTTTTTGTTCCTTA+TGG | + | chr8_2:13297138-13297157 | Msa1235340:CDS | 35.0% |
!!! | AATTTCACTGGTTTTTCAGC+AGG | - | chr8_2:13297282-13297301 | None:intergenic | 35.0% |
GCTCTAACCTTAAATTTCAC+TGG | - | chr8_2:13297294-13297313 | None:intergenic | 35.0% | |
! | GATGCTTTTACTGATAGGAT+TGG | + | chr8_2:13297375-13297394 | Msa1235340:CDS | 35.0% |
TTTATCACAGTAATAGCTCC+TGG | - | chr8_2:13297707-13297726 | None:intergenic | 35.0% | |
!! | ACAATTGAAGGATTTGCTAC+TGG | + | chr8_2:13297761-13297780 | Msa1235340:CDS | 35.0% |
GCCAAAAAAGTAGTATCGTA+AGG | + | chr8_2:13297959-13297978 | Msa1235340:intron | 35.0% | |
!!! | GCCTTACGATACTACTTTTT+TGG | - | chr8_2:13297963-13297982 | None:intergenic | 35.0% |
! | TTATAAAATCACGGACTGCT+TGG | - | chr8_2:13298189-13298208 | None:intergenic | 35.0% |
ATACTCACTCTCTTGTTAGA+TGG | - | chr8_2:13298556-13298575 | None:intergenic | 35.0% | |
TGGAACAATAATCTTACCCT+TGG | + | chr8_2:13298661-13298680 | Msa1235340:intron | 35.0% | |
GTAAATGCTGAATAATGCCA+AGG | - | chr8_2:13298681-13298700 | None:intergenic | 35.0% | |
CTTAGTCAAAAGATCGAGAA+AGG | - | chr8_2:13298774-13298793 | None:intergenic | 35.0% | |
AAAGACCTGAAAAATCTGAG+AGG | + | chr8_2:13298921-13298940 | Msa1235340:CDS | 35.0% | |
GCAAGATCAATTCCTTTATC+TGG | - | chr8_2:13299017-13299036 | None:intergenic | 35.0% | |
AAATGTATCCATACCCTAGA+CGG | + | chr8_2:13299060-13299079 | Msa1235340:CDS | 35.0% | |
GAGTATGAGAAGAGAGAAAA+AGG | + | chr8_2:13299263-13299282 | Msa1235340:intron | 35.0% | |
GGAGAGAAGAAAAAAACATG+TGG | + | chr8_2:13299662-13299681 | Msa1235340:intron | 35.0% | |
AAATGGTTACTGTTCACGTT+TGG | - | chr8_2:13299731-13299750 | None:intergenic | 35.0% | |
GAGAGAGAATGCAAAGAAAA+TGG | - | chr8_2:13299748-13299767 | None:intergenic | 35.0% | |
AAGTGCGATGTTAGATGATT+CGG | + | chr8_2:13299816-13299835 | Msa1235340:intron | 35.0% | |
GATGAAATCACAATAGTCGT+TGG | - | chr8_2:13299884-13299903 | None:intergenic | 35.0% | |
TACAATGTGCAACTAAAACG+AGG | - | chr8_2:13299993-13300012 | None:intergenic | 35.0% | |
ACACACTAAGTATAGAGAAG+AGG | - | chr8_2:13300135-13300154 | None:intergenic | 35.0% | |
TTCTAACATAGGATCTTCTC+TGG | + | chr8_2:13300307-13300326 | Msa1235340:intron | 35.0% | |
! | TGTAAAGCATCACAAGATGT+CGG | - | chr8_2:13300348-13300367 | None:intergenic | 35.0% |
CTTGGTATATACATAGGAAG+TGG | - | chr8_2:13300563-13300582 | None:intergenic | 35.0% | |
ACCAAGAGATGAAAGATTTG+AGG | + | chr8_2:13300577-13300596 | Msa1235340:CDS | 35.0% | |
TCCTCAAATCTTTCATCTCT+TGG | - | chr8_2:13300581-13300600 | None:intergenic | 35.0% | |
! | TGAACACATTTTCAGTGAAG+AGG | + | chr8_2:13300609-13300628 | Msa1235340:CDS | 35.0% |
! | TTTTCAGTGAAGAGGCTAAA+AGG | + | chr8_2:13300617-13300636 | Msa1235340:CDS | 35.0% |
GAGCAGAAAGACTTGATTTA+AGG | - | chr8_2:13300667-13300686 | None:intergenic | 35.0% | |
TGAGTAGTCCAACACTATAA+AGG | - | chr8_2:13300727-13300746 | None:intergenic | 35.0% | |
TGTTGGACTACTCATTAAGT+TGG | + | chr8_2:13300733-13300752 | Msa1235340:CDS | 35.0% | |
GTTGGACTACTCATTAAGTT+GGG | + | chr8_2:13300734-13300753 | Msa1235340:CDS | 35.0% | |
TCTTGGGAATGTCATACTTA+AGG | - | chr8_2:13300838-13300857 | None:intergenic | 35.0% | |
CCACTCACTTGATATAATCT+TGG | - | chr8_2:13300855-13300874 | None:intergenic | 35.0% | |
CCAAGATTATATCAAGTGAG+TGG | + | chr8_2:13300852-13300871 | Msa1235340:intron | 35.0% | |
TTTCCCTTTCATTTGCAATG+TGG | + | chr8_2:13301320-13301339 | Msa1235340:intron | 35.0% | |
CCAAATAACATGTTGTAGTG+TGG | - | chr8_2:13301425-13301444 | None:intergenic | 35.0% | |
CCACACTACAACATGTTATT+TGG | + | chr8_2:13301422-13301441 | Msa1235340:intron | 35.0% | |
!! | TTTCTTAACTTGTGCCTTGA+GGG | - | chr8_2:13301707-13301726 | None:intergenic | 35.0% |
!! | ATTCTTAACTTGTGCCCTAA+GGG | + | chr8_2:13301829-13301848 | Msa1235340:intron | 35.0% |
!! | AGTGTTAACTTGTACCCTTA+GGG | - | chr8_2:13301846-13301865 | None:intergenic | 35.0% |
!! | TAGTGTTAACTTGTACCCTT+AGG | - | chr8_2:13301847-13301866 | None:intergenic | 35.0% |
GAAAACTGTAAGTCTCTCAA+TGG | - | chr8_2:13302004-13302023 | None:intergenic | 35.0% | |
GGATCTAATTTACTAACAGG+TGG | - | chr8_2:13302027-13302046 | None:intergenic | 35.0% | |
TTTAAATGGTACCTCTTGGA+CGG | - | chr8_2:13302118-13302137 | None:intergenic | 35.0% | |
! | ATGCTTTAAATGGTACCTCT+TGG | - | chr8_2:13302122-13302141 | None:intergenic | 35.0% |
! | AATTCACAAGGCACTTGATT+AGG | - | chr8_2:13302200-13302219 | None:intergenic | 35.0% |
TTATAATGGTCACCAATACG+TGG | + | chr8_2:13302315-13302334 | Msa1235340:intron | 35.0% | |
AGGCAACTAACTCTTGTATA+TGG | + | chr8_2:13302462-13302481 | Msa1235340:intron | 35.0% | |
GTATCATTGTCCTTTAACAG+TGG | - | chr8_2:13302549-13302568 | None:intergenic | 35.0% | |
! | CCCACTTTCTTTTCTTCTTT+TGG | + | chr8_2:13302704-13302723 | Msa1235340:intron | 35.0% |
!! | TCTACCTTCCATTTTTGGAA+AGG | + | chr8_2:13302780-13302799 | Msa1235340:CDS | 35.0% |
TGATCCTTTCCAAAAATGGA+AGG | - | chr8_2:13302787-13302806 | None:intergenic | 35.0% | |
! | GCATTGATCCTTTCCAAAAA+TGG | - | chr8_2:13302791-13302810 | None:intergenic | 35.0% |
! | CAAAAAGTATATGGTACGTG+TGG | - | chr8_2:13302837-13302856 | None:intergenic | 35.0% |
! | TTAGTAGTTGCATCTAAAGC+AGG | - | chr8_2:13302947-13302966 | None:intergenic | 35.0% |
ATTGTATGCTTGCTTACCAA+TGG | - | chr8_2:13303036-13303055 | None:intergenic | 35.0% | |
! | AAGGGTCTTATAATTAGGGA+CGG | - | chr8_2:13303713-13303732 | None:intergenic | 35.0% |
! | GCAAAGGGGTCTTATAAAAA+GGG | - | chr8_2:13303753-13303772 | None:intergenic | 35.0% |
! | AGCAAAGGGGTCTTATAAAA+AGG | - | chr8_2:13303754-13303773 | None:intergenic | 35.0% |
TGTAGTTGGAAATAGCAAAG+GGG | - | chr8_2:13303767-13303786 | None:intergenic | 35.0% | |
TAAACTAACTCTCTCTCCTA+AGG | + | chr8_2:13303867-13303886 | Msa1235340:intron | 35.0% | |
AATCACGGGAATTAAGAAAG+TGG | - | chr8_2:13303942-13303961 | None:intergenic | 35.0% | |
!! | ATTCCCGTGATTTTAGCAAA+AGG | + | chr8_2:13303950-13303969 | Msa1235340:intron | 35.0% |
!! | TTCCCGTGATTTTAGCAAAA+GGG | + | chr8_2:13303951-13303970 | Msa1235340:intron | 35.0% |
! | AGACCCTTTTGCTAAAATCA+CGG | - | chr8_2:13303957-13303976 | None:intergenic | 35.0% |
! | AAGGGTCTTATATATAGGGA+CGG | + | chr8_2:13303969-13303988 | Msa1235340:intron | 35.0% |
GACGGAGGTAGTATTAATTT+CGG | + | chr8_2:13303987-13304006 | Msa1235340:intron | 35.0% | |
CGAAAACAATTGATGTACAG+AGG | - | chr8_2:13304097-13304116 | None:intergenic | 35.0% | |
AAAATAAGGGTCTGTGATTG+TGG | + | chr8_2:13304190-13304209 | Msa1235340:intron | 35.0% | |
AAATACACACCTAGCTTCTA+CGG | + | chr8_2:13304632-13304651 | Msa1235340:intron | 35.0% | |
!! | ATTATTAGCTTTAGGCCATG+TGG | - | chr8_2:13304792-13304811 | None:intergenic | 35.0% |
CAGAAGATGGTCTTCTAATT+TGG | + | chr8_2:13304829-13304848 | Msa1235340:CDS | 35.0% | |
! | CTGTCATTGATAATTAGGCT+TGG | - | chr8_2:13304906-13304925 | None:intergenic | 35.0% |
TACTCCGAATCAATCAATGT+AGG | + | chr8_2:13304942-13304961 | Msa1235340:CDS | 35.0% | |
CCATGATTCGTCTTTCATAT+CGG | - | chr8_2:13304973-13304992 | None:intergenic | 35.0% | |
ATATGAAAGACGAATCATGG+TGG | + | chr8_2:13304973-13304992 | Msa1235340:CDS | 35.0% | |
! | TTGTCACTGTCGTTCAATTT+TGG | - | chr8_2:13304999-13305018 | None:intergenic | 35.0% |
! | CAACATGCTGCACTTAATTT+TGG | + | chr8_2:13305062-13305081 | Msa1235340:CDS | 35.0% |
! | AATTTTGGACAGTACCCTTA+TGG | + | chr8_2:13305077-13305096 | Msa1235340:CDS | 35.0% |
ATTAATCTTCTCATCAACGG+GGG | - | chr8_2:13305122-13305141 | None:intergenic | 35.0% | |
!! | TATTCAGGGTCATTTTCTTC+CGG | - | chr8_2:13305146-13305165 | None:intergenic | 35.0% |
! | TTTGTAGCTTGCAACAAACT+AGG | - | chr8_2:13305215-13305234 | None:intergenic | 35.0% |
TATCAATTCTCTGCGGAAAT+TGG | + | chr8_2:13305347-13305366 | Msa1235340:CDS | 35.0% | |
GGAAATTGGAAAGATTGAGA+AGG | + | chr8_2:13305361-13305380 | Msa1235340:CDS | 35.0% | |
! | TTGAGAAGGTGATTGATAGT+AGG | + | chr8_2:13305375-13305394 | Msa1235340:CDS | 35.0% |
! | AAGGTGATTGATAGTAGGAA+TGG | + | chr8_2:13305380-13305399 | Msa1235340:CDS | 35.0% |
! | TTGATAGTAGGAATGGTGAT+AGG | + | chr8_2:13305387-13305406 | Msa1235340:CDS | 35.0% |
CTAGGAGCAAGTAATTCATA+CGG | - | chr8_2:13305446-13305465 | None:intergenic | 35.0% | |
TGCAATCACTCACTGAAAAA+TGG | - | chr8_2:13305745-13305764 | None:intergenic | 35.0% | |
AGTGAGTGATTGCAAAAATC+TGG | + | chr8_2:13305751-13305770 | Msa1235340:three_prime_UTR | 35.0% | |
GAACAGTGAGAAATGGTTAG+TGG | - | chr8_2:13296909-13296928 | None:intergenic | 40.0% | |
AGAAGTGGAACAGTGAGAAA+TGG | - | chr8_2:13296916-13296935 | None:intergenic | 40.0% | |
TTGTTAGGGCCATGAATCAA+AGG | - | chr8_2:13297029-13297048 | None:intergenic | 40.0% | |
GGCCCTAACAAAAGAATTCA+TGG | + | chr8_2:13297038-13297057 | Msa1235340:CDS | 40.0% | |
TTAGAGCTGTTGTAACAGTG+AGG | + | chr8_2:13297307-13297326 | Msa1235340:CDS | 40.0% | |
AGTGAGGAACAAGATCAAAG+AGG | + | chr8_2:13297323-13297342 | Msa1235340:CDS | 40.0% | |
ATCCTTCAACACTGCTTCAT+TGG | - | chr8_2:13297606-13297625 | None:intergenic | 40.0% | |
! | ATGAAGCAGTGTTGAAGGAT+TGG | + | chr8_2:13297606-13297625 | Msa1235340:CDS | 40.0% |
!! | GACTCAAATTTTGGAGAACC+AGG | + | chr8_2:13297686-13297705 | Msa1235340:CDS | 40.0% |
GACTACCTACGGTATGAATT+GGG | + | chr8_2:13298340-13298359 | Msa1235340:intron | 40.0% | |
CTTTACCCAATTCATACCGT+AGG | - | chr8_2:13298348-13298367 | None:intergenic | 40.0% | |
ACTAGTAGTCTTTATGGTCG+AGG | + | chr8_2:13298631-13298650 | Msa1235340:intron | 40.0% | |
CTCAAAAGTTTAATCCCAGC+AGG | - | chr8_2:13298897-13298916 | None:intergenic | 40.0% | |
! | CATCACCTCTCAGATTTTTC+AGG | - | chr8_2:13298929-13298948 | None:intergenic | 40.0% |
CTGAAAAATCTGAGAGGTGA+TGG | + | chr8_2:13298927-13298946 | Msa1235340:CDS | 40.0% | |
!! | AATCTGAGAGGTGATGGAAA+AGG | + | chr8_2:13298933-13298952 | Msa1235340:CDS | 40.0% |
GATCTTGGAAACCCAGATAA+AGG | + | chr8_2:13299002-13299021 | Msa1235340:CDS | 40.0% | |
ATTTCAGATCCTCCAAGAGT+TGG | - | chr8_2:13299044-13299063 | None:intergenic | 40.0% | |
TACCTGTATCAGATGGTTCA+CGG | - | chr8_2:13299097-13299116 | None:intergenic | 40.0% | |
!! | TCTATCCTTTAGGGTGTGTT+TGG | + | chr8_2:13299201-13299220 | Msa1235340:intron | 40.0% |
CTTAACCAAACACACCCTAA+AGG | - | chr8_2:13299209-13299228 | None:intergenic | 40.0% | |
! | TGTTTGTTACGCGAGAAGTT+GGG | - | chr8_2:13299788-13299807 | None:intergenic | 40.0% |
AGTGCGATGTTAGATGATTC+GGG | + | chr8_2:13299817-13299836 | Msa1235340:intron | 40.0% | |
ACATTTGATACGATGGTGTG+TGG | + | chr8_2:13300091-13300110 | Msa1235340:intron | 40.0% | |
CATTTGATACGATGGTGTGT+GGG | + | chr8_2:13300092-13300111 | Msa1235340:intron | 40.0% | |
CATCTTGTGATGCTTTACAG+TGG | + | chr8_2:13300349-13300368 | Msa1235340:intron | 40.0% | |
TATTACTTGTGAGAGTCGTG+TGG | + | chr8_2:13300532-13300551 | Msa1235340:CDS | 40.0% | |
! | GAAAGACTTGATTTAAGGCC+AGG | - | chr8_2:13300662-13300681 | None:intergenic | 40.0% |
!! | GTTGATGGCCTTTATAGTGT+TGG | + | chr8_2:13300716-13300735 | Msa1235340:CDS | 40.0% |
TTGCTAACAATGTGAGGCAA+TGG | - | chr8_2:13300788-13300807 | None:intergenic | 40.0% | |
TGGATCTTGCTAACAATGTG+AGG | - | chr8_2:13300794-13300813 | None:intergenic | 40.0% | |
TGTCATACTTAAGGATACCC+TGG | - | chr8_2:13300829-13300848 | None:intergenic | 40.0% | |
AAAATTGTGAATCGGACGAG+AGG | - | chr8_2:13300993-13301012 | None:intergenic | 40.0% | |
CCACCACATTGCAAATGAAA+GGG | - | chr8_2:13301326-13301345 | None:intergenic | 40.0% | |
CCTTTCATTTGCAATGTGGT+GGG | + | chr8_2:13301324-13301343 | Msa1235340:intron | 40.0% | |
CTTTCATTTGCAATGTGGTG+GGG | + | chr8_2:13301325-13301344 | Msa1235340:intron | 40.0% | |
!! | GTTTCTTAACTTGTGCCTTG+AGG | - | chr8_2:13301708-13301727 | None:intergenic | 40.0% |
!! | GATTCTTAACTTGTGCCCTA+AGG | + | chr8_2:13301828-13301847 | Msa1235340:intron | 40.0% |
! | GTGCAGAGGATAAATTTGCT+TGG | + | chr8_2:13301926-13301945 | Msa1235340:intron | 40.0% |
TAACTCCAGCTATTGCTTGA+CGG | - | chr8_2:13301972-13301991 | None:intergenic | 40.0% | |
GTAAGTCTCTCAATGGTAAC+AGG | - | chr8_2:13301997-13302016 | None:intergenic | 40.0% | |
TCTTGTGGACCATAGATTTC+AGG | - | chr8_2:13302048-13302067 | None:intergenic | 40.0% | |
TCTTTAAGTGCAGACTCTTG+TGG | - | chr8_2:13302063-13302082 | None:intergenic | 40.0% | |
AGGCACTTGATTAGGTAACA+TGG | - | chr8_2:13302192-13302211 | None:intergenic | 40.0% | |
ACTTGAACCAAACCACGTAT+TGG | - | chr8_2:13302330-13302349 | None:intergenic | 40.0% | |
GGTTCAAGTAGTGAGTGATT+TGG | + | chr8_2:13302341-13302360 | Msa1235340:intron | 40.0% | |
AACATATTGTGTACGTCCTG+AGG | + | chr8_2:13302442-13302461 | Msa1235340:intron | 40.0% | |
ATACAAGAGTTAGTTGCCTC+AGG | - | chr8_2:13302461-13302480 | None:intergenic | 40.0% | |
AATCTATCATGGTGCCCAAT+AGG | + | chr8_2:13302508-13302527 | Msa1235340:intron | 40.0% | |
! | GTGCATTCAAGAGCATACAT+AGG | - | chr8_2:13302616-13302635 | None:intergenic | 40.0% |
TTTGGAAAGGATCAATGCCT+TGG | + | chr8_2:13302793-13302812 | Msa1235340:CDS | 40.0% | |
AGGCTAAGTTCAATTGCAAC+AGG | - | chr8_2:13302881-13302900 | None:intergenic | 40.0% | |
!! | ACACGTTTTGATCGAGTGTT+TGG | - | chr8_2:13302917-13302936 | None:intergenic | 40.0% |
ATGCAACTACTAATTGGGTG+TGG | + | chr8_2:13302954-13302973 | Msa1235340:CDS | 40.0% | |
TATGCTTGCTTACCAATGGT+GGG | - | chr8_2:13303032-13303051 | None:intergenic | 40.0% | |
AAGACATTTACACTCACACG+TGG | + | chr8_2:13303115-13303134 | Msa1235340:intron | 40.0% | |
GTGAAAAGACATTGCGACAT+AGG | + | chr8_2:13303227-13303246 | Msa1235340:intron | 40.0% | |
AGTTATTGGATCCACACATG+AGG | + | chr8_2:13303500-13303519 | Msa1235340:CDS | 40.0% | |
! | GACCCTTTTGCTAAAATCAC+GGG | - | chr8_2:13303956-13303975 | None:intergenic | 40.0% |
AATGCGCCTCAAATGGTAAA+AGG | - | chr8_2:13304123-13304142 | None:intergenic | 40.0% | |
GATTACCCTTATGCAGAAGA+TGG | + | chr8_2:13304816-13304835 | Msa1235340:CDS | 40.0% | |
GAAGACCATCTTCTGCATAA+GGG | - | chr8_2:13304824-13304843 | None:intergenic | 40.0% | |
AGAAGACCATCTTCTGCATA+AGG | - | chr8_2:13304825-13304844 | None:intergenic | 40.0% | |
ATGACAGAGAGTTACAAGCT+TGG | + | chr8_2:13304919-13304938 | Msa1235340:CDS | 40.0% | |
! | GTGGCCTACATTGATTGATT+CGG | - | chr8_2:13304949-13304968 | None:intergenic | 40.0% |
CCGATATGAAAGACGAATCA+TGG | + | chr8_2:13304970-13304989 | Msa1235340:CDS | 40.0% | |
!! | TCGTCTGACGAAGAGTATTT+AGG | + | chr8_2:13305269-13305288 | Msa1235340:CDS | 40.0% |
!! | ACGAAGAGTATTTAGGTGAG+AGG | + | chr8_2:13305276-13305295 | Msa1235340:CDS | 40.0% |
GGAATGGTGATAGGAATTTG+AGG | + | chr8_2:13305396-13305415 | Msa1235340:CDS | 40.0% | |
GAATTACTTGCTCCTAGTTC+TGG | + | chr8_2:13305449-13305468 | Msa1235340:CDS | 40.0% | |
TGCTAAGCATTATGGTTGGT+TGG | + | chr8_2:13305565-13305584 | Msa1235340:three_prime_UTR | 40.0% | |
GAAATGGTTAGTGGTCGTGT+CGG | - | chr8_2:13296900-13296919 | None:intergenic | 45.0% | |
TCTTCACTGATAGCTGCAAC+AGG | - | chr8_2:13297204-13297223 | None:intergenic | 45.0% | |
! | GACCAATGAAGCAGTGTTGA+AGG | + | chr8_2:13297601-13297620 | Msa1235340:CDS | 45.0% |
GCTTGAACCCAAGAATTGCA+AGG | - | chr8_2:13297800-13297819 | None:intergenic | 45.0% | |
GCAATTCTTGGGTTCAAGCT+AGG | + | chr8_2:13297801-13297820 | Msa1235340:CDS | 45.0% | |
CAAGCTAGGAAAGATCTTCC+TGG | + | chr8_2:13297815-13297834 | Msa1235340:CDS | 45.0% | |
!! | AATCACGGACTGCTTGGTTT+TGG | - | chr8_2:13298183-13298202 | None:intergenic | 45.0% |
TAGTCGTCAGGTCAATTCAG+TGG | - | chr8_2:13298325-13298344 | None:intergenic | 45.0% | |
ATTGACCTGACGACTACCTA+CGG | + | chr8_2:13298329-13298348 | Msa1235340:intron | 45.0% | |
CGACTACCTACGGTATGAAT+TGG | + | chr8_2:13298339-13298358 | Msa1235340:intron | 45.0% | |
GTAGTCTTTATGGTCGAGGA+TGG | + | chr8_2:13298635-13298654 | Msa1235340:intron | 45.0% | |
TTTATGGTCGAGGATGGATG+TGG | + | chr8_2:13298641-13298660 | Msa1235340:intron | 45.0% | |
GGTGTATCATCGGGTAGATA+AGG | - | chr8_2:13298876-13298895 | None:intergenic | 45.0% | |
AATCCCAGCAGGTGTATCAT+CGG | - | chr8_2:13298886-13298905 | None:intergenic | 45.0% | |
GATCTTGCTAGACCAACTCT+TGG | + | chr8_2:13299029-13299048 | Msa1235340:CDS | 45.0% | |
GGGTACATGATGTTGAAGTC+TGG | + | chr8_2:13299536-13299555 | Msa1235340:intron | 45.0% | |
! | GTGTTTGTTACGCGAGAAGT+TGG | - | chr8_2:13299789-13299808 | None:intergenic | 45.0% |
ATTTCGCTGCAAATCTCCCT+TGG | + | chr8_2:13300171-13300190 | Msa1235340:intron | 45.0% | |
ATCTTCTCTGGACCAACTTG+TGG | + | chr8_2:13300319-13300338 | Msa1235340:intron | 45.0% | |
TCTTCTCTGGACCAACTTGT+GGG | + | chr8_2:13300320-13300339 | Msa1235340:intron | 45.0% | |
! | GATGCTTTACAGTGGTGTCA+TGG | + | chr8_2:13300357-13300376 | Msa1235340:intron | 45.0% |
!! | GTGCTTCATAACTTGCTTCC+TGG | + | chr8_2:13300641-13300660 | Msa1235340:CDS | 45.0% |
ATCCAAGAATCCACAAGCCA+GGG | + | chr8_2:13300809-13300828 | Msa1235340:CDS | 45.0% | |
GCTTAATTTAGCAGTGCGTC+AGG | + | chr8_2:13301063-13301082 | Msa1235340:intron | 45.0% | |
CCCTTTCATTTGCAATGTGG+TGG | + | chr8_2:13301323-13301342 | Msa1235340:intron | 45.0% | |
CCCACCACATTGCAAATGAA+AGG | - | chr8_2:13301327-13301346 | None:intergenic | 45.0% | |
! | AATGCTAACTTGTGCCCTCA+AGG | + | chr8_2:13301690-13301709 | Msa1235340:intron | 45.0% |
AACTCCAGCTATTGCTTGAC+GGG | - | chr8_2:13301971-13301990 | None:intergenic | 45.0% | |
ATGGTCACCAATACGTGGTT+TGG | + | chr8_2:13302320-13302339 | Msa1235340:intron | 45.0% | |
GAAAGGATCAATGCCTTGGA+TGG | + | chr8_2:13302797-13302816 | Msa1235340:CDS | 45.0% | |
!! | ACAGGCTTTAGAGTACCAAG+TGG | - | chr8_2:13302863-13302882 | None:intergenic | 45.0% |
CATGTTTGCTCCAATGATGC+TGG | + | chr8_2:13302992-13303011 | Msa1235340:CDS | 45.0% | |
GTATGCTTGCTTACCAATGG+TGG | - | chr8_2:13303033-13303052 | None:intergenic | 45.0% | |
TCCACACATGAGGTACACTT+TGG | + | chr8_2:13303510-13303529 | Msa1235340:CDS | 45.0% | |
TCCAAAGTGTACCTCATGTG+TGG | - | chr8_2:13303514-13303533 | None:intergenic | 45.0% | |
CAGAGCTTGATCAATGCAGA+TGG | + | chr8_2:13303553-13303572 | Msa1235340:CDS | 45.0% | |
ATTGAGTCTTGCTTCACTCC+TGG | + | chr8_2:13303580-13303599 | Msa1235340:CDS | 45.0% | |
AGCAGCAGAACTAATCTCCA+TGG | - | chr8_2:13303614-13303633 | None:intergenic | 45.0% | |
! | CTGCTGCTTACAAAACCAAC+TGG | + | chr8_2:13303626-13303645 | Msa1235340:CDS | 45.0% |
! | GGTCTTATAATTAGGGACGG+AGG | - | chr8_2:13303710-13303729 | None:intergenic | 45.0% |
! | GGTCTTATATATAGGGACGG+AGG | + | chr8_2:13303972-13303991 | Msa1235340:intron | 45.0% |
CGAAACTCACACACGCAATA+CGG | + | chr8_2:13304045-13304064 | Msa1235340:intron | 45.0% | |
! | TCGCTGCCTTTTACCATTTG+AGG | + | chr8_2:13304114-13304133 | Msa1235340:intron | 45.0% |
! | TACCATTTGAGGCGCATTGT+TGG | + | chr8_2:13304125-13304144 | Msa1235340:intron | 45.0% |
AACCAACAATGCGCCTCAAA+TGG | - | chr8_2:13304130-13304149 | None:intergenic | 45.0% | |
!!! | TTGAGGAGGGTTTTAGAGAG+TGG | - | chr8_2:13304278-13304297 | None:intergenic | 45.0% |
! | GTCTCTTTTCCGTAGAAGCT+AGG | - | chr8_2:13304644-13304663 | None:intergenic | 45.0% |
TTAGGCCATGTGGTTGTGTT+GGG | - | chr8_2:13304782-13304801 | None:intergenic | 45.0% | |
TTTAGGCCATGTGGTTGTGT+TGG | - | chr8_2:13304783-13304802 | None:intergenic | 45.0% | |
ATTCGTCTTTCATATCGGCG+TGG | - | chr8_2:13304968-13304987 | None:intergenic | 45.0% | |
ATTAAGTGCAGCATGTTGCG+CGG | - | chr8_2:13305060-13305079 | None:intergenic | 45.0% | |
TTTGGACAGTACCCTTATGG+AGG | + | chr8_2:13305080-13305099 | Msa1235340:CDS | 45.0% | |
TTGGACAGTACCCTTATGGA+GGG | + | chr8_2:13305081-13305100 | Msa1235340:CDS | 45.0% | |
AGAGGCAACAACCTTCGATT+TGG | + | chr8_2:13305294-13305313 | Msa1235340:CDS | 45.0% | |
!! | CAACAACCTTCGATTTGGAC+AGG | + | chr8_2:13305299-13305318 | Msa1235340:CDS | 45.0% |
AGGAATTTGAGGAACCGTTG+CGG | + | chr8_2:13305407-13305426 | Msa1235340:CDS | 45.0% | |
!!! | TTTTATTTTTATTTATTTGT+AGG | + | chr8_2:13299432-13299451 | Msa1235340:intron | 5.0% |
!!! | ATTTTCAAAAAATTTAAAAA+TGG | - | chr8_2:13301022-13301041 | None:intergenic | 5.0% |
!!! | GTAATTTTTTTATATATAAA+AGG | - | chr8_2:13301530-13301549 | None:intergenic | 5.0% |
!! | AAAAAAATGTATAATAAATA+GGG | - | chr8_2:13303814-13303833 | None:intergenic | 5.0% |
CAGGTCAATTCAGTGGTGCT+TGG | - | chr8_2:13298318-13298337 | None:intergenic | 50.0% | |
TCATACCGTAGGTAGTCGTC+AGG | - | chr8_2:13298337-13298356 | None:intergenic | 50.0% | |
TACCCGATGATACACCTGCT+GGG | + | chr8_2:13298880-13298899 | Msa1235340:CDS | 50.0% | |
ATCCCAGCAGGTGTATCATC+GGG | - | chr8_2:13298885-13298904 | None:intergenic | 50.0% | |
CTTGCTAGACCAACTCTTGG+AGG | + | chr8_2:13299032-13299051 | Msa1235340:CDS | 50.0% | |
CTCCACTTTCTTCGCTACCT+TGG | + | chr8_2:13299641-13299660 | Msa1235340:intron | 50.0% | |
CTCCAAGGTAGCGAAGAAAG+TGG | - | chr8_2:13299646-13299665 | None:intergenic | 50.0% | |
GAAGTTGGGACGAGAGAGAA+AGG | - | chr8_2:13299774-13299793 | None:intergenic | 50.0% | |
GATCCAAGAATCCACAAGCC+AGG | + | chr8_2:13300808-13300827 | Msa1235340:CDS | 50.0% | |
! | TACCCTGGCTTGTGGATTCT+TGG | - | chr8_2:13300814-13300833 | None:intergenic | 50.0% |
! | CTTAAGGATACCCTGGCTTG+TGG | - | chr8_2:13300822-13300841 | None:intergenic | 50.0% |
! | TTGCAATGTGGTGGGGTCTT+TGG | + | chr8_2:13301332-13301351 | Msa1235340:intron | 50.0% |
CTCATGTGCCTAATGTGCAG+AGG | + | chr8_2:13301912-13301931 | Msa1235340:intron | 50.0% | |
TTTGCCCGTCAAGCAATAGC+TGG | + | chr8_2:13301964-13301983 | Msa1235340:CDS | 50.0% | |
TAATGGCATGACCGTCCAAG+AGG | + | chr8_2:13302104-13302123 | Msa1235340:CDS | 50.0% | |
GATCGAGTGTTTGGTCCAGA+TGG | - | chr8_2:13302908-13302927 | None:intergenic | 50.0% | |
TTGGTGCACACCAGCATCAT+TGG | - | chr8_2:13303005-13303024 | None:intergenic | 50.0% | |
!! | CTTACCAATGGTGGGCAAGT+TGG | - | chr8_2:13303024-13303043 | None:intergenic | 50.0% |
!! | AACCAACTGGCGTTTTGACC+AGG | + | chr8_2:13303639-13303658 | Msa1235340:CDS | 50.0% |
ATCCTGGTCAAAACGCCAGT+TGG | - | chr8_2:13303644-13303663 | None:intergenic | 50.0% | |
ACCTGCGGATGAGATCTTGA+GGG | - | chr8_2:13303672-13303691 | None:intergenic | 50.0% | |
TACCTGCGGATGAGATCTTG+AGG | - | chr8_2:13303673-13303692 | None:intergenic | 50.0% | |
GCGTGTGTGAGTTTCGTTCT+AGG | - | chr8_2:13304041-13304060 | None:intergenic | 50.0% | |
TTGGCACGTACCCTCCATAA+GGG | - | chr8_2:13305094-13305113 | None:intergenic | 50.0% | |
TTTGGCACGTACCCTCCATA+AGG | - | chr8_2:13305095-13305114 | None:intergenic | 50.0% | |
GCATCACCTGTCCAAATCGA+AGG | - | chr8_2:13305308-13305327 | None:intergenic | 50.0% | |
GTAACACCAGGTCCAGAACT+AGG | - | chr8_2:13305464-13305483 | None:intergenic | 50.0% | |
!! | GACCTGGTGTTACATGCAGA+GGG | + | chr8_2:13305471-13305490 | Msa1235340:CDS | 50.0% |
!! | ACCTGGTGTTACATGCAGAG+GGG | + | chr8_2:13305472-13305491 | Msa1235340:CDS | 50.0% |
CTACCCGATGATACACCTGC+TGG | + | chr8_2:13298879-13298898 | Msa1235340:CDS | 55.0% | |
CAGATGGTTCACGGCCAGTA+CGG | - | chr8_2:13299088-13299107 | None:intergenic | 55.0% | |
GGCCGTGAACCATCTGATAC+AGG | + | chr8_2:13299092-13299111 | Msa1235340:CDS | 55.0% | |
! | AGATGTCGGTGCCCACAAGT+TGG | - | chr8_2:13300334-13300353 | None:intergenic | 55.0% |
GAACTTAGCCTGCCTCCATC+TGG | + | chr8_2:13302890-13302909 | Msa1235340:CDS | 55.0% | |
TGTTTGGTCCAGATGGAGGC+AGG | - | chr8_2:13302901-13302920 | None:intergenic | 55.0% | |
CGAGTGTTTGGTCCAGATGG+AGG | - | chr8_2:13302905-13302924 | None:intergenic | 55.0% | |
TGCACCAACTTGCCCACCAT+TGG | + | chr8_2:13303017-13303036 | Msa1235340:CDS | 55.0% | |
GCTACGCACACATGCTTGCA+TGG | + | chr8_2:13303423-13303442 | Msa1235340:intron | 55.0% | |
ATCTCCATGGCATAGCGACC+AGG | - | chr8_2:13303601-13303620 | None:intergenic | 55.0% | |
GATCTTGAGGGAGGCTATCC+TGG | - | chr8_2:13303660-13303679 | None:intergenic | 55.0% | |
TGCGGATGAGATCTTGAGGG+AGG | - | chr8_2:13303669-13303688 | None:intergenic | 55.0% | |
TCCCTCAAGATCTCATCCGC+AGG | + | chr8_2:13303668-13303687 | Msa1235340:CDS | 55.0% | |
CCATGTGGTTGTGTTGGGTC+AGG | - | chr8_2:13304777-13304796 | None:intergenic | 55.0% | |
CCTGACCCAACACAACCACA+TGG | + | chr8_2:13304774-13304793 | Msa1235340:CDS | 55.0% | |
CTCATCAACGGGGGACGATT+TGG | - | chr8_2:13305113-13305132 | None:intergenic | 55.0% | |
GCAAAACACCAGCACCGCAA+CGG | - | chr8_2:13305424-13305443 | None:intergenic | 55.0% | |
!! | CTTGCTCCTAGTTCTGGACC+TGG | + | chr8_2:13305455-13305474 | Msa1235340:CDS | 55.0% |
!! | GGACCTGGTGTTACATGCAG+AGG | + | chr8_2:13305470-13305489 | Msa1235340:CDS | 55.0% |
ACCCCTCTGCATGTAACACC+AGG | - | chr8_2:13305476-13305495 | None:intergenic | 55.0% | |
! | GTACGGCACCGTCTAGGGTA+TGG | - | chr8_2:13299071-13299090 | None:intergenic | 60.0% |
!! | TACCCTAGACGGTGCCGTAC+TGG | + | chr8_2:13299071-13299090 | Msa1235340:CDS | 60.0% |
CACTCCTGGTCGCTATGCCA+TGG | + | chr8_2:13303594-13303613 | Msa1235340:CDS | 60.0% | |
TTGAGGAACCGTTGCGGTGC+TGG | + | chr8_2:13305413-13305432 | Msa1235340:CDS | 60.0% | |
GGCCAGTACGGCACCGTCTA+GGG | - | chr8_2:13299076-13299095 | None:intergenic | 65.0% | |
CGGCCAGTACGGCACCGTCT+AGG | - | chr8_2:13299077-13299096 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_2 | gene | 13296801 | 13305794 | 13296801 | ID=Msa1235340;Name=Msa1235340 |
chr8_2 | mRNA | 13296801 | 13305794 | 13296801 | ID=Msa1235340-mRNA-1;Parent=Msa1235340;Name=Msa1235340-mRNA-1;_AED=0.03;_eAED=0.03;_QI=235|0.85|0.87|1|1|1|8|277|911 |
chr8_2 | exon | 13296801 | 13297441 | 13296801 | ID=Msa1235340-mRNA-1:exon:5128;Parent=Msa1235340-mRNA-1 |
chr8_2 | exon | 13297582 | 13297862 | 13297582 | ID=Msa1235340-mRNA-1:exon:5129;Parent=Msa1235340-mRNA-1 |
chr8_2 | exon | 13298873 | 13299113 | 13298873 | ID=Msa1235340-mRNA-1:exon:5130;Parent=Msa1235340-mRNA-1 |
chr8_2 | exon | 13300531 | 13300866 | 13300531 | ID=Msa1235340-mRNA-1:exon:5131;Parent=Msa1235340-mRNA-1 |
chr8_2 | exon | 13301932 | 13302125 | 13301932 | ID=Msa1235340-mRNA-1:exon:5132;Parent=Msa1235340-mRNA-1 |
chr8_2 | exon | 13302737 | 13303038 | 13302737 | ID=Msa1235340-mRNA-1:exon:5133;Parent=Msa1235340-mRNA-1 |
chr8_2 | exon | 13303471 | 13303689 | 13303471 | ID=Msa1235340-mRNA-1:exon:5134;Parent=Msa1235340-mRNA-1 |
chr8_2 | exon | 13304761 | 13305794 | 13304761 | ID=Msa1235340-mRNA-1:exon:5135;Parent=Msa1235340-mRNA-1 |
chr8_2 | five_prime_UTR | 13296801 | 13297035 | 13296801 | ID=Msa1235340-mRNA-1:five_prime_utr;Parent=Msa1235340-mRNA-1 |
chr8_2 | CDS | 13297036 | 13297441 | 13297036 | ID=Msa1235340-mRNA-1:cds;Parent=Msa1235340-mRNA-1 |
chr8_2 | CDS | 13297582 | 13297862 | 13297582 | ID=Msa1235340-mRNA-1:cds;Parent=Msa1235340-mRNA-1 |
chr8_2 | CDS | 13298873 | 13299113 | 13298873 | ID=Msa1235340-mRNA-1:cds;Parent=Msa1235340-mRNA-1 |
chr8_2 | CDS | 13300531 | 13300866 | 13300531 | ID=Msa1235340-mRNA-1:cds;Parent=Msa1235340-mRNA-1 |
chr8_2 | CDS | 13301932 | 13302125 | 13301932 | ID=Msa1235340-mRNA-1:cds;Parent=Msa1235340-mRNA-1 |
chr8_2 | CDS | 13302737 | 13303038 | 13302737 | ID=Msa1235340-mRNA-1:cds;Parent=Msa1235340-mRNA-1 |
chr8_2 | CDS | 13303471 | 13303689 | 13303471 | ID=Msa1235340-mRNA-1:cds;Parent=Msa1235340-mRNA-1 |
chr8_2 | CDS | 13304761 | 13305517 | 13304761 | ID=Msa1235340-mRNA-1:cds;Parent=Msa1235340-mRNA-1 |
chr8_2 | three_prime_UTR | 13305518 | 13305794 | 13305518 | ID=Msa1235340-mRNA-1:three_prime_utr;Parent=Msa1235340-mRNA-1 |
Gene Sequence |
Protein sequence |