AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1356050

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1356050 MtrunA17_Chr8g0344201 96.872 927 13 1 1 911 1 927 0.0 1853
Msa1356050 MtrunA17_Chr8g0377101 52.850 842 373 7 89 910 78 915 0.0 904
Msa1356050 MtrunA17_Chr4g0047281 52.906 843 347 11 90 911 82 895 0.0 876
Msa1356050 MtrunA17_Chr3g0118651 47.226 811 395 9 122 910 103 902 0.0 779
Msa1356050 MtrunA17_Chr3g0118641 47.102 811 396 11 122 910 102 901 0.0 772
Msa1356050 MtrunA17_Chr3g0118621 44.905 844 431 11 90 910 32 864 0.0 732
Msa1356050 MtrunA17_Chr1g0191921 44.678 855 446 10 79 910 7 857 0.0 724
Msa1356050 MtrunA17_Chr8g0342881 46.108 835 417 12 99 910 31 855 0.0 721
Msa1356050 MtrunA17_Chr8g0343021 46.229 822 405 12 113 910 55 863 0.0 715
Msa1356050 MtrunA17_Chr7g0272791 45.455 847 431 14 91 910 24 866 0.0 714
Msa1356050 MtrunA17_Chr8g0343031 46.163 821 405 13 114 910 57 864 0.0 714
Msa1356050 MtrunA17_Chr5g0406871 45.687 823 409 14 113 910 57 866 0.0 709
Msa1356050 MtrunA17_Chr2g0329901 46.173 823 403 16 113 910 55 862 0.0 708
Msa1356050 MtrunA17_Chr2g0329911 45.207 845 425 15 91 910 29 860 0.0 707
Msa1356050 MtrunA17_Chr4g0033171 50.354 707 323 10 225 910 25 724 0.0 706
Msa1356050 MtrunA17_Chr8g0342971 45.620 822 412 14 114 910 58 869 0.0 694
Msa1356050 MtrunA17_Chr1g0205611 43.407 857 452 13 84 910 2 855 0.0 689
Msa1356050 MtrunA17_Chr8g0344211 44.336 821 424 12 113 910 57 867 0.0 684
Msa1356050 MtrunA17_Chr8g0343011 44.377 818 423 10 113 910 59 864 0.0 683
Msa1356050 MtrunA17_Chr3g0120071 45.642 826 404 13 113 910 49 857 0.0 679
Msa1356050 MtrunA17_Chr8g0342921 44.349 814 420 12 120 910 65 868 0.0 679
Msa1356050 MtrunA17_Chr8g0342931 46.245 759 376 10 174 910 1 749 0.0 677
Msa1356050 MtrunA17_Chr8g0342891 43.484 821 431 12 113 910 50 860 0.0 674
Msa1356050 MtrunA17_Chr8g0342951 45.067 821 418 12 113 910 57 867 0.0 671
Msa1356050 MtrunA17_Chr8g0342901 42.574 808 401 11 128 910 58 827 0.0 640
Msa1356050 MtrunA17_Chr8g0342981 43.007 765 372 13 177 910 91 822 0.0 602
Msa1356050 MtrunA17_Chr8g0343001 42.112 767 374 10 164 910 90 806 0.0 580
Msa1356050 MtrunA17_Chr8g0342991 42.057 768 373 12 164 910 90 806 0.0 574
Msa1356050 MtrunA17_Chr8g0338451 37.182 866 501 13 65 897 1 856 0.0 558
Msa1356050 MtrunA17_Chr8g0344241 44.810 395 199 4 534 910 67 460 7.59e-111 348
Msa1356050 MtrunA17_Chr6g0471951 36.926 501 259 6 385 866 12 474 6.36e-105 334
Msa1356050 MtrunA17_Chr7g0218231 52.101 119 41 1 578 680 14 132 1.33e-33 126
Msa1356050 MtrunA17_Chr6g0468081 59.551 89 36 0 592 680 1 89 5.81e-31 117
Msa1356050 MtrunA17_Chr4g0047271 58.696 92 38 0 820 911 1 92 8.71e-29 110
Msa1356050 MtrunA17_Chr4g0033181 33.862 189 99 5 44 229 46 211 1.11e-26 109
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1356050 AT1G17420.1 68.353 929 264 6 1 910 1 918 0.0 1326
Msa1356050 AT1G72520.1 69.198 935 253 11 1 910 1 925 0.0 1312
Msa1356050 AT1G67560.1 50.270 927 417 15 7 910 11 916 0.0 870
Msa1356050 AT3G45140.1 43.203 868 447 15 66 910 51 895 0.0 718
Msa1356050 AT1G55020.1 44.917 846 434 14 90 910 20 858 0.0 713
Msa1356050 AT3G22400.1 43.619 862 449 12 83 910 27 885 0.0 699
Msa1356050 AT3G45140.2 46.053 760 378 11 173 910 4 753 0.0 691

Find 195 sgRNAs with CRISPR-Local

Find 446 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACTGAAAATGTGTTCATTT+TGG 0.118061 tig0015366:+89172 None:intergenic
TTTACGGTTGACTCAAATTT+TGG 0.128121 tig0015366:-91466 Msa1356050:CDS
GCAAGATCAATTCCTTTATC+TGG 0.137436 tig0015366:+90160 None:intergenic
CTTTAGATGCAACTACTAAT+TGG 0.156046 tig0015366:-87009 Msa1356050:CDS
GAGCAGAAAGACTTGATTTA+AGG 0.159246 tig0015366:+89111 None:intergenic
ACTCTCTGTCATTGATTATT+AGG 0.161431 tig0015366:+85371 None:intergenic
TTTGGTCAGCAATAGAAAAT+TGG 0.164309 tig0015366:-85432 Msa1356050:CDS
TATCAATTCTCTGCGGAAAT+TGG 0.203663 tig0015366:-84932 Msa1356050:CDS
CAGAAGATGGTCTTCTAATT+TGG 0.251107 tig0015366:-85450 Msa1356050:CDS
TCTTGTGGACCATAGATTTC+AGG 0.265813 tig0015366:+87943 None:intergenic
GAATTACTTGCTCCTAGTTC+TGG 0.266117 tig0015366:-84830 Msa1356050:CDS
AAGTCCTAACAATCTTAATT+TGG 0.267658 tig0015366:-85252 Msa1356050:CDS
CATTCCAAATTAAGATTGTT+AGG 0.277408 tig0015366:+85248 None:intergenic
TACCCTGGCTTGTGGATTCT+TGG 0.281500 tig0015366:+88964 None:intergenic
TCGTCTGACGAAGAGTATTT+AGG 0.285117 tig0015366:-85010 Msa1356050:CDS
GAAAAGAAAATTCTCTTTCC+AGG 0.286608 tig0015366:+91310 None:intergenic
GATATGAAACTTGTATATTC+AGG 0.290338 tig0015366:+85121 None:intergenic
TTGATTATTAGGCTTGGATT+TGG 0.309327 tig0015366:+85382 None:intergenic
TCCTCAAATCTTTCATCTCT+TGG 0.311154 tig0015366:+89197 None:intergenic
TCAGGATCTAATTTACTAAC+AGG 0.316657 tig0015366:+87961 None:intergenic
GTTGCAAGCTACAAAATATA+TGG 0.317917 tig0015366:-85059 Msa1356050:CDS
TTGTCACTGTCGTTCAATTT+CGG 0.321906 tig0015366:+85283 None:intergenic
TAATTACACAGCTGAATTTA+CGG 0.322203 tig0015366:-91482 Msa1356050:CDS
CCACTCACTTGATATAATCT+TGG 0.323901 tig0015366:+88923 None:intergenic
AATGAATTCTCAGATGTTGA+TGG 0.326863 tig0015366:-89074 Msa1356050:CDS
GTCAAAGAAGACTAATATTA+AGG 0.327000 tig0015366:-91515 Msa1356050:CDS
ATCCTTCAACACTGCTTCAT+TGG 0.329544 tig0015366:+91540 None:intergenic
GTATTAATCTTCTCATCAAC+GGG 0.342100 tig0015366:+85158 None:intergenic
ATGGAAACAAAAGAGTTGTT+AGG 0.343668 tig0015366:-92016 Msa1356050:CDS
AATTTCGGACAGTATCCTTA+TGG 0.355580 tig0015366:-85202 Msa1356050:CDS
CTGTCATTGATTATTAGGCT+TGG 0.359024 tig0015366:+85376 None:intergenic
GGATCCAATAACTTGAAAAT+TGG 0.359274 tig0015366:+86493 None:intergenic
CAACATGCTGCACTTAATTT+CGG 0.362410 tig0015366:-85217 Msa1356050:CDS
GTAAGTCTCTCAATGGTAAC+AGG 0.380176 tig0015366:+87994 None:intergenic
TTAGAAAATATAACAATTGA+AGG 0.381425 tig0015366:-91394 Msa1356050:CDS
AGAGGCAACAACCTTCGATT+TGG 0.381540 tig0015366:-84985 Msa1356050:CDS
GTGCTTCATAACTTGCTTCC+TGG 0.384287 tig0015366:-89134 Msa1356050:CDS
GATCTTGGAAACCCAGATAA+AGG 0.388829 tig0015366:-90172 Msa1356050:CDS
GGCCCTAACAAAAGAATTCA+TGG 0.391351 tig0015366:-92135 Msa1356050:CDS
CCATGGTTCGTCTTTCATAT+CGG 0.393755 tig0015366:+85309 None:intergenic
AGAATTCATGGGTTCTTCAT+TGG 0.395604 tig0015366:-92123 Msa1356050:CDS
ATGAATCACTGGTTTCTTTG+AGG 0.398757 tig0015366:+92158 None:intergenic
GGTGATGAAGAAGGAAATAT+TGG 0.401225 tig0015366:+92092 None:intergenic
TTGAGGAACCGTTGCGGTGC+TGG 0.401483 tig0015366:-84866 Msa1356050:CDS
TTGGTCAGCAATAGAAAATT+GGG 0.402009 tig0015366:-85431 Msa1356050:CDS
GAACTTAGCCTGCCTCCATC+TGG 0.403989 tig0015366:-87067 Msa1356050:CDS
TATGACACATACAATGATCT+TGG 0.412730 tig0015366:-90187 Msa1356050:CDS
CACTCACTTGATATAATCTT+GGG 0.413543 tig0015366:+88924 None:intergenic
AGAAGACCATCTTCTGCATA+AGG 0.416449 tig0015366:+85457 None:intergenic
TTTGTTAATTTCTATGAAGA+AGG 0.416949 tig0015366:+92206 None:intergenic
TCAAAGAAACCAGTGATTCA+TGG 0.418876 tig0015366:-92156 Msa1356050:exon
TCTTGGGAATGTCATACTTA+AGG 0.423843 tig0015366:+88940 None:intergenic
AAATTAAGATTGTTAGGACT+TGG 0.428810 tig0015366:+85254 None:intergenic
TTTAGATGCAACTACTAATT+GGG 0.429267 tig0015366:-87008 Msa1356050:CDS
TGAGTAGTCCAACACTATAA+AGG 0.430450 tig0015366:+89051 None:intergenic
TTAGACCATGTGGTTGTGTT+GGG 0.432526 tig0015366:+85500 None:intergenic
GATCTTGAGGGAGGCTATCC+TGG 0.433367 tig0015366:+86326 None:intergenic
TGATTATTAGGCTTGGATTT+GGG 0.433593 tig0015366:+85383 None:intergenic
TGTTGGACTACTCATTAAGT+TGG 0.436827 tig0015366:-89042 Msa1356050:CDS
AGAAGTGGAACAGTGAGAAA+TGG 0.437846 tig0015366:+92260 None:intergenic
TGCTAAGCATTATGGTTGGT+TGG 0.439918 tig0015366:-84716 Msa1356050:three_prime_UTR
AGGCTAAGTTCAATTGCAAC+AGG 0.441630 tig0015366:+87079 None:intergenic
TCTTTAAGTGCAGACTCTTG+TGG 0.444467 tig0015366:+87928 None:intergenic
CAAGATCAATTCCTTTATCT+GGG 0.447942 tig0015366:+90161 None:intergenic
ATTGAGTCTTGCTTCACTCC+TGG 0.448673 tig0015366:-86403 Msa1356050:CDS
GACCAATGAAGCAGTGTTGA+AGG 0.454038 tig0015366:-91542 Msa1356050:CDS
CAAGCTAGAAAAGATCTTCC+TGG 0.457008 tig0015366:-91328 Msa1356050:CDS
TTGTTAGGGCCATGAATCAC+TGG 0.457945 tig0015366:+92147 None:intergenic
TTTGTAGCTTGCAACAAACT+AGG 0.458682 tig0015366:+85067 None:intergenic
TCTTTCATTTCTCCAAACAT+AGG 0.459834 tig0015366:-92237 Msa1356050:five_prime_UTR
TTGGTGCACACCAGCATCAT+TGG 0.460866 tig0015366:+86955 None:intergenic
TTGAGAAGGTGATTGATAGT+AGG 0.462008 tig0015366:-84904 Msa1356050:CDS
GCTCTAACCTTAAATTTCAC+TGG 0.462917 tig0015366:+91882 None:intergenic
GAAAGACTTGATTTAAGGCC+AGG 0.464489 tig0015366:+89116 None:intergenic
ACAATTGAAGGATTTGCTAC+TGG 0.466343 tig0015366:-91382 Msa1356050:CDS
AAATTAGATCCTGAAATCTA+TGG 0.468171 tig0015366:-87952 Msa1356050:CDS
GTGGCCTACATTGATTGATT+CGG 0.469250 tig0015366:+85333 None:intergenic
AACTCCAGCTATTGCTTGAC+GGG 0.470233 tig0015366:+88020 None:intergenic
TCTTCACTGATAGCTGCAAC+AGG 0.474972 tig0015366:+91972 None:intergenic
GTTGGACTACTCATTAAGTT+GGG 0.477312 tig0015366:-89041 Msa1356050:CDS
ACCAAGAGATGAAAGATTTG+AGG 0.477798 tig0015366:-89198 Msa1356050:CDS
TTTAGACCATGTGGTTGTGT+TGG 0.478176 tig0015366:+85499 None:intergenic
TTTGGAAAGGATCAATGCCT+TGG 0.478720 tig0015366:-87164 Msa1356050:CDS
GATCTTGCTAGACCAACTCT+TGG 0.479530 tig0015366:-90145 Msa1356050:CDS
CCATTCTTCTGTTGAAAACA+TGG 0.484479 tig0015366:+92071 None:intergenic
GAAGATGATGATATAGAAGA+AGG 0.486786 tig0015366:+91927 None:intergenic
CCATGTGGTTGTGTTGGGTC+TGG 0.492360 tig0015366:+85505 None:intergenic
TCATCTCTTGGTATATACAT+AGG 0.492403 tig0015366:+89209 None:intergenic
TAACTCCAGCTATTGCTTGA+CGG 0.493184 tig0015366:+88019 None:intergenic
CGGCCAGTACGGCACCGTCT+AGG 0.495310 tig0015366:+90100 None:intergenic
ATGAAGCAGTGTTGAAGGAT+TGG 0.497542 tig0015366:-91537 Msa1356050:CDS
TACCCTAGACGGTGCCGTAC+TGG 0.498027 tig0015366:-90103 Msa1356050:CDS
GAAGACCATCTTCTGCATAA+GGG 0.501628 tig0015366:+85458 None:intergenic
TGCACCAACTTGCCCACCAT+TGG 0.505334 tig0015366:-86940 Msa1356050:intron
CTAGGAGCAAGTAATTCATA+AGG 0.506030 tig0015366:+84836 None:intergenic
CTCAAAAGTTTAATCCCAGC+AGG 0.506743 tig0015366:+90280 None:intergenic
TTTATCACAGTAATTGCTCC+TGG 0.507282 tig0015366:+91439 None:intergenic
CATGTTTGCTCCAATGATGC+TGG 0.508665 tig0015366:-86965 Msa1356050:CDS
GGCCGTGAACCATCTGATAC+AGG 0.510574 tig0015366:-90082 Msa1356050:intron
TACCTGTATCAGATGGTTCA+CGG 0.511896 tig0015366:+90080 None:intergenic
CTGCTGCTTACAAAACCAAC+TGG 0.511913 tig0015366:-86357 Msa1356050:CDS
GATCCAAGAATCCACAAGCC+AGG 0.513956 tig0015366:-88967 Msa1356050:CDS
CTTGCTCCTAGTTCTGGACC+TGG 0.515196 tig0015366:-84824 Msa1356050:CDS
GTACGGCACCGTCTAGGGTA+TGG 0.515752 tig0015366:+90106 None:intergenic
CTACCCGATGATACACCTGC+TGG 0.515885 tig0015366:-90295 Msa1356050:CDS
GGTGTATCATCGGGTAGATA+AGG 0.517991 tig0015366:+90301 None:intergenic
GTTGATGGCCTTTATAGTGT+TGG 0.523396 tig0015366:-89059 Msa1356050:CDS
CTTAAGGATACCCTGGCTTG+TGG 0.525590 tig0015366:+88956 None:intergenic
ATCTCCATGGCATAGCGACC+AGG 0.526081 tig0015366:+86385 None:intergenic
GACCTGGTGTTACATGCAGA+GGG 0.527475 tig0015366:-84808 Msa1356050:CDS
TGGAGAAATGAAAGAAGAAG+TGG 0.529072 tig0015366:+92245 None:intergenic
GGTATTAATCTTCTCATCAA+CGG 0.530886 tig0015366:+85157 None:intergenic
ATATGAAACTTGTATATTCA+GGG 0.530940 tig0015366:+85122 None:intergenic
TTTGCCCGTCAAGCAATAGC+TGG 0.532353 tig0015366:-88024 Msa1356050:CDS
CTTACCAATGGTGGGCAAGT+TGG 0.533372 tig0015366:+86936 None:intergenic
ATCCCAGCAGGTGTATCATC+GGG 0.533446 tig0015366:+90292 None:intergenic
CACTCCTGGTCGCTATGCCA+TGG 0.533642 tig0015366:-86389 Msa1356050:CDS
TGTTTGGTCCAGATGGAGGC+AGG 0.533655 tig0015366:+87059 None:intergenic
ATTTCAGATCCTCCAAGAGT+TGG 0.535524 tig0015366:+90133 None:intergenic
CTTGCTAGACCAACTCTTGG+AGG 0.537115 tig0015366:-90142 Msa1356050:CDS
CAACAACCTTCGATTTGGAC+AGG 0.537155 tig0015366:-84980 Msa1356050:CDS
TAATTATTACCTGTATCAGA+TGG 0.538174 tig0015366:+90073 None:intergenic
GATTACCCTTATGCAGAAGA+TGG 0.539224 tig0015366:-85463 Msa1356050:CDS
GAAAGGATCAATGCCTTGGA+TGG 0.543205 tig0015366:-87160 Msa1356050:CDS
GTAACACCAGGTCCAGAACT+AGG 0.543782 tig0015366:+84818 None:intergenic
TTGCTAACAATGTGAGGCAA+TGG 0.546196 tig0015366:+88990 None:intergenic
TTGATAGTAGGAATGGTGAT+AGG 0.548139 tig0015366:-84892 Msa1356050:CDS
CTTGGTATATACATAGGAAG+TGG 0.550676 tig0015366:+89215 None:intergenic
TCCACACATGAGGTACACTT+TGG 0.551392 tig0015366:-86473 Msa1356050:CDS
GGAATGGTGATAGGAATTTG+AGG 0.553948 tig0015366:-84883 Msa1356050:CDS
GAACAGTGAGAAATGGTTAG+TGG 0.555931 tig0015366:+92267 None:intergenic
GGACCTGGTGTTACATGCAG+AGG 0.558911 tig0015366:-84809 Msa1356050:CDS
AATCCCAGCAGGTGTATCAT+CGG 0.559593 tig0015366:+90291 None:intergenic
ACCTGCGGATGAGATCTTGA+GGG 0.562889 tig0015366:+86314 None:intergenic
GGCCAGTACGGCACCGTCTA+GGG 0.564885 tig0015366:+90101 None:intergenic
GATCGAGTGTTTGGTCCAGA+TGG 0.566962 tig0015366:+87052 None:intergenic
TTAGTAGTTGCATCTAAAGC+AGG 0.568173 tig0015366:+87013 None:intergenic
TTTGGCACGTAACCTCCATA+AGG 0.568931 tig0015366:+85187 None:intergenic
TGAAAACATGGTGATGAAGA+AGG 0.569969 tig0015366:+92083 None:intergenic
GTTGATGAGAAGATTAATAC+CGG 0.571822 tig0015366:-85155 Msa1356050:CDS
TCCCTCAAGATCTCATCCGC+AGG 0.574537 tig0015366:-86315 Msa1356050:intron
GGATCTAATTTACTAACAGG+TGG 0.574715 tig0015366:+87964 None:intergenic
GTGCAGAGGATAAATTTGCT+TGG 0.574838 tig0015366:-88062 Msa1356050:intron
GATCTAATTTACTAACAGGT+GGG 0.574850 tig0015366:+87965 None:intergenic
AATCTGAGAGGTGATGGAAA+AGG 0.575229 tig0015366:-90241 Msa1356050:CDS
GAAAACTGTAAGTCTCTCAA+TGG 0.578316 tig0015366:+87987 None:intergenic
ATCCTGGTCAAAACGCCAGT+TGG 0.579614 tig0015366:+86342 None:intergenic
AAATGTATCCATACCCTAGA+CGG 0.586694 tig0015366:-90114 Msa1356050:CDS
ATCCAAGAATCCACAAGCCA+GGG 0.589581 tig0015366:-88966 Msa1356050:CDS
TTCGGACAGTATCCTTATGG+AGG 0.590508 tig0015366:-85199 Msa1356050:CDS
ATTATTAGCTTTAGACCATG+TGG 0.590586 tig0015366:+85490 None:intergenic
TACCCGATGATACACCTGCT+GGG 0.591254 tig0015366:-90294 Msa1356050:CDS
TACCTGCGGATGAGATCTTG+AGG 0.594715 tig0015366:+86313 None:intergenic
CAGATGGTTCACGGCCAGTA+CGG 0.595137 tig0015366:+90089 None:intergenic
AGCAGCAGAACTAATCTCCA+TGG 0.597060 tig0015366:+86372 None:intergenic
TGGATCTTGCTAACAATGTG+AGG 0.598996 tig0015366:+88984 None:intergenic
GTATGCTTGCTTACCAATGG+TGG 0.599350 tig0015366:+86927 None:intergenic
GCATCACCTGTCCAAATCGA+AGG 0.600030 tig0015366:+84974 None:intergenic
AAGGTGATTGATAGTAGGAA+TGG 0.600577 tig0015366:-84899 Msa1356050:CDS
CAGAGCTTGATCAATGCAGA+TGG 0.602184 tig0015366:-86430 Msa1356050:CDS
ATATTACTAGTAGACATTGG+TGG 0.606826 tig0015366:-84623 Msa1356050:three_prime_UTR
TCGTTCAATTTCGGCCACCA+TGG 0.607867 tig0015366:+85292 None:intergenic
TGTCATACTTAAGGATACCC+TGG 0.608790 tig0015366:+88949 None:intergenic
TAAATATTACTAGTAGACAT+TGG 0.610626 tig0015366:-84626 Msa1356050:three_prime_UTR
TCCAAAGTGTACCTCATGTG+TGG 0.612282 tig0015366:+86472 None:intergenic
CGAGTGTTTGGTCCAGATGG+AGG 0.614080 tig0015366:+87055 None:intergenic
GCCCTAACAAAAGAATTCAT+GGG 0.614296 tig0015366:-92134 Msa1356050:CDS
TTTAAATGGTACCTCTTGGA+CGG 0.616838 tig0015366:+87873 None:intergenic
ACCCCTCTGCATGTAACACC+AGG 0.617716 tig0015366:+84806 None:intergenic
ATTAAGTGCAGCATGTTGCG+CGG 0.618193 tig0015366:+85222 None:intergenic
ATGCAACTACTAATTGGGTG+TGG 0.623131 tig0015366:-87003 Msa1356050:CDS
ACGAAGAGTATTTAGGTGAG+AGG 0.628094 tig0015366:-85003 Msa1356050:CDS
ATGACAGAGAGTTACAAGCT+TGG 0.632533 tig0015366:-85360 Msa1356050:CDS
GAAATGGTTAGTGGTCGTGT+CGG 0.639946 tig0015366:+92276 None:intergenic
TACTCCGAATCAATCAATGT+AGG 0.641645 tig0015366:-85337 Msa1356050:CDS
GCAAAACACCAGCACCGCAA+CGG 0.642856 tig0015366:+84858 None:intergenic
GCTTGAACCCAAGAATTGCA+AGG 0.647001 tig0015366:+91346 None:intergenic
GGAAATTGGAAAGATTGAGA+AGG 0.652309 tig0015366:-84918 Msa1356050:CDS
AGGAATTTGAGGAACCGTTG+CGG 0.653263 tig0015366:-84872 Msa1356050:CDS
TATGCTTGCTTACCAATGGT+GGG 0.656904 tig0015366:+86928 None:intergenic
TATTACTTGTGAGAGTCGTG+TGG 0.661476 tig0015366:-89243 Msa1356050:CDS
CCGATATGAAAGACGAACCA+TGG 0.663394 tig0015366:-85309 Msa1356050:CDS
TAATGGCATGACCGTCCAAG+AGG 0.670114 tig0015366:-87884 Msa1356050:intron
TGCGGATGAGATCTTGAGGG+AGG 0.673318 tig0015366:+86317 None:intergenic
AGTGAGGAACAAGATCAAAG+AGG 0.677524 tig0015366:-91850 Msa1356050:CDS
AGTTATTGGATCCACACATG+AGG 0.685129 tig0015366:-86483 Msa1356050:CDS
GTTCGTCTTTCATATCGGCG+TGG 0.688334 tig0015366:+85314 None:intergenic
CCAGACCCAACACAACCACA+TGG 0.693358 tig0015366:-85505 Msa1356050:CDS
ACCTGGTGTTACATGCAGAG+GGG 0.702111 tig0015366:-84807 Msa1356050:CDS
AGTAATAGTTCACATAAGTG+CGG 0.704279 tig0015366:+85407 None:intergenic
ATTAATCTTCTCATCAACGG+GGG 0.724917 tig0015366:+85160 None:intergenic
ATATGAAAGACGAACCATGG+TGG 0.746586 tig0015366:-85306 Msa1356050:CDS
TATTAATCTTCTCATCAACG+GGG 0.754646 tig0015366:+85159 None:intergenic
ACAGGCTTTAGAGTACCAAG+TGG 0.757581 tig0015366:+87097 None:intergenic
TTAGAGCTGTTGTAACAGTG+AGG 0.760433 tig0015366:-91866 Msa1356050:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATAACTGAATTAAATTAT+TGG - tig0015366:85272-85291 Msa1356050:CDS 10.0%
!!! AATAACATTCAATATTTTTA+CGG + tig0015366:85848-85867 None:intergenic 10.0%
!! TAACAATAATTATAAAATCA+CGG + tig0015366:85904-85923 None:intergenic 10.0%
!! TATTTGTATAAATTTACATT+AGG + tig0015366:86410-86429 None:intergenic 10.0%
!! AATTTATACAAATAATAAAG+TGG - tig0015366:86416-86435 Msa1356050:CDS 10.0%
!!! ATTTTTCATAAGTAAATTTT+TGG - tig0015366:88039-88058 Msa1356050:CDS 10.0%
!!! AAAAAATATAAATTTTCCTT+TGG + tig0015366:88387-88406 None:intergenic 10.0%
!!! TTTTTTATATATAAAAGGAA+TGG + tig0015366:88611-88630 None:intergenic 10.0%
!! ATATATAAAAAAATTACAAC+TGG - tig0015366:88619-88638 Msa1356050:intron 10.0%
!! TATATAAAAAAATTACAACT+GGG - tig0015366:88620-88639 Msa1356050:intron 10.0%
!! AGTAATAATTAATAACAAAT+TGG + tig0015366:88646-88665 None:intergenic 10.0%
!!! GTTCTTTATGAAATTTTATT+TGG - tig0015366:85236-85255 Msa1356050:CDS 15.0%
!! TTAGAAAATATAACAATTGA+AGG - tig0015366:85487-85506 Msa1356050:CDS 15.0%
!!! CCACTTTATTTTTTTATTTA+GGG + tig0015366:86449-86468 None:intergenic 15.0%
!!! ACCACTTTATTTTTTTATTT+AGG + tig0015366:86450-86469 None:intergenic 15.0%
!!! TACAAATCAATTTGATTTTA+AGG - tig0015366:87362-87381 Msa1356050:intron 15.0%
!! ATAACTAAACAAAATTGAAT+TGG - tig0015366:87602-87621 Msa1356050:intron 15.0%
!!! TTTTGAGATATAATTTTCTT+AGG - tig0015366:88223-88242 Msa1356050:intron 15.0%
!!! TTTGAGATATAATTTTCTTA+GGG - tig0015366:88224-88243 Msa1356050:intron 15.0%
!!! AACTCTAAAGTTTAAAATAA+GGG - tig0015366:90779-90798 Msa1356050:intron 15.0%
!! TAATATTTACAATTTCTCTT+AGG + tig0015366:90916-90935 None:intergenic 15.0%
!!! GTTTTATATATATACAAGTG+AGG + tig0015366:84556-84575 None:intergenic 20.0%
!! TTTGTTAATTTCTATGAAGA+AGG + tig0015366:84678-84697 None:intergenic 20.0%
!!! GAGAATTTTCTTTTCTAATA+AGG - tig0015366:85579-85598 Msa1356050:intron 20.0%
!!! ATTTGACTATATGATTTTCT+AGG + tig0015366:85988-86007 None:intergenic 20.0%
!! TATAGTCAAATTTATGCATA+TGG - tig0015366:85997-86016 Msa1356050:intron 20.0%
!! TCGAAAAATAAAGATAAAGA+GGG + tig0015366:86136-86155 None:intergenic 20.0%
!! TCGTTTATTGGATTAAATTA+AGG - tig0015366:86181-86200 Msa1356050:intron 20.0%
!!! TTGATTTTATCTAATAAGAG+AGG - tig0015366:86253-86272 Msa1356050:intron 20.0%
!! CCCTAAATAAAAAAATAAAG+TGG - tig0015366:86446-86465 Msa1356050:CDS 20.0%
!!! ATATTCTTTTCGAAATAAAG+TGG - tig0015366:86517-86536 Msa1356050:intron 20.0%
!!! GTATTTAAAGTTATATCTTG+TGG - tig0015366:87127-87146 Msa1356050:CDS 20.0%
!!! TTTGATGTATTTTCTAACAT+AGG - tig0015366:87402-87421 Msa1356050:intron 20.0%
!! AATGTAGAATCAAAATTGTT+AGG + tig0015366:88091-88110 None:intergenic 20.0%
!!! GAAATTTTATAGAAAGAAAG+AGG + tig0015366:88278-88297 None:intergenic 20.0%
!!! CACATTTTAAATCAACTTAA+TGG - tig0015366:88980-88999 Msa1356050:CDS 20.0%
!!! AAGTTTTTGAATGCTTTAAA+TGG + tig0015366:89025-89044 None:intergenic 20.0%
!!! TTCAAAAACTTTTTCCTTTT+TGG - tig0015366:89034-89053 Msa1356050:CDS 20.0%
!!! TGTTTATTTTTAAGGTACAT+GGG + tig0015366:89150-89169 None:intergenic 20.0%
!!! ATGTTTATTTTTAAGGTACA+TGG + tig0015366:89151-89170 None:intergenic 20.0%
!!! GAGAAACATGTTTATTTTTA+AGG + tig0015366:89158-89177 None:intergenic 20.0%
!! AAAAATAAACATGTTTCTCA+TGG - tig0015366:89159-89178 Msa1356050:CDS 20.0%
!! ACTTGACATCAAATTTATAA+TGG - tig0015366:89194-89213 Msa1356050:CDS 20.0%
!! ATTTGGATACTTTAAACAAA+TGG - tig0015366:89251-89270 Msa1356050:intron 20.0%
!! ATGCAACTTAAATACTAAAT+TGG - tig0015366:90240-90259 Msa1356050:CDS 20.0%
!! TAATATATGATATTTACCTG+CGG + tig0015366:90585-90604 None:intergenic 20.0%
!!! CAACTCTAAAGTTTAAAATA+AGG - tig0015366:90778-90797 Msa1356050:intron 20.0%
!!! TTTCTTTTATGATTTGTTTG+AGG - tig0015366:90939-90958 Msa1356050:intron 20.0%
!!! AAACTAAGTTGAATGTAAAA+TGG + tig0015366:91182-91201 None:intergenic 20.0%
!!! TAATTGATGTTTGCTTTATT+TGG - tig0015366:91286-91305 Msa1356050:intron 20.0%
!!! TTTTCACTTTTTAACATTTC+AGG - tig0015366:91341-91360 Msa1356050:CDS 20.0%
!!! TTTCACTTTTTAACATTTCA+GGG - tig0015366:91342-91361 Msa1356050:CDS 20.0%
!! ATATGAAACTTGTATATTCA+GGG + tig0015366:91762-91781 None:intergenic 20.0%
!!! TACTTAAGACTTTTTTTATG+TGG + tig0015366:92115-92134 None:intergenic 20.0%
!! TAAATATTACTAGTAGACAT+TGG - tig0015366:92255-92274 Msa1356050:five_prime_UTR 20.0%
! CAAAAAAAAACCTTAGAAGA+AGG - tig0015366:84694-84713 Msa1356050:three_prime_UTR 25.0%
! TGAAAAACCAGTGAAATTTA+AGG - tig0015366:84992-85011 Msa1356050:CDS 25.0%
! GTCAAAGAAGACTAATATTA+AGG - tig0015366:85366-85385 Msa1356050:CDS 25.0%
! TAATTACACAGCTGAATTTA+CGG - tig0015366:85399-85418 Msa1356050:CDS 25.0%
! ATTTATCTGTCATCATAACA+TGG - tig0015366:85647-85666 Msa1356050:intron 25.0%
! GCCAAAAAAATAGTATCATA+AGG - tig0015366:85697-85716 Msa1356050:intron 25.0%
!!! GCCTTATGATACTATTTTTT+TGG + tig0015366:85701-85720 None:intergenic 25.0%
!!! TTTTTTCAACGTGAGAAATA+AGG - tig0015366:85740-85759 Msa1356050:intron 25.0%
! GGTGAAAATTGAAAGTTAAA+AGG - tig0015366:85761-85780 Msa1356050:intron 25.0%
!!! TGTTTTGAAGAATCTTGAAA+AGG - tig0015366:85796-85815 Msa1356050:intron 25.0%
!! TTTACGGTAAAATGAACTTT+TGG + tig0015366:85832-85851 None:intergenic 25.0%
! ATTAGTATATCACTTTATCG+TGG + tig0015366:85955-85974 None:intergenic 25.0%
! ACTACTAGTATTCAATTCAA+CGG + tig0015366:86080-86099 None:intergenic 25.0%
!! AATAAAGATAAAGAGGGTAT+TGG + tig0015366:86130-86149 None:intergenic 25.0%
! CTCGAAAAATAAAGATAAAG+AGG + tig0015366:86137-86156 None:intergenic 25.0%
! TAATTATTACCTGTATCAGA+TGG + tig0015366:86811-86830 None:intergenic 25.0%
! TACAATGACATTTGATATGA+TGG - tig0015366:87189-87208 Msa1356050:CDS 25.0%
!!! TATCACACTTTTTTTTCCAA+GGG + tig0015366:87295-87314 None:intergenic 25.0%
! TAATATGTTACTATGCTTTG+TGG - tig0015366:87570-87589 Msa1356050:intron 25.0%
! CTAAACAAAATTGAATTGGA+TGG - tig0015366:87606-87625 Msa1356050:intron 25.0%
!! ATTTCCGCATTACTAAATTT+TGG - tig0015366:88128-88147 Msa1356050:intron 25.0%
!! TTTCCGCATTACTAAATTTT+GGG - tig0015366:88129-88148 Msa1356050:intron 25.0%
!!! TGAATTACACTTTTTGTCAT+TGG - tig0015366:88176-88195 Msa1356050:intron 25.0%
!!! AAATTTTCCTTTGGTGTAAT+TGG + tig0015366:88378-88397 None:intergenic 25.0%
! ATGCCATTATAGAATATTCA+TGG + tig0015366:88448-88467 None:intergenic 25.0%
! AAATTAGATCCTGAAATCTA+TGG - tig0015366:88929-88948 Msa1356050:intron 25.0%
! GTTTGAAAAAACAATTCACA+AGG + tig0015366:89105-89124 None:intergenic 25.0%
! TACATGGGAAATGTTATAAT+TGG + tig0015366:89135-89154 None:intergenic 25.0%
! AATTTATAATGGTCACCAAT+AGG - tig0015366:89205-89224 Msa1356050:CDS 25.0%
!! ACTTAAATTGCTTAGTCTTT+AGG + tig0015366:89303-89322 None:intergenic 25.0%
!! AAGACTAAGCAATTTAAGTT+AGG - tig0015366:89304-89323 Msa1356050:intron 25.0%
!! AGACTAAGCAATTTAAGTTA+GGG - tig0015366:89305-89324 Msa1356050:intron 25.0%
! GGAGAAAAATCAGTTAAAAA+TGG - tig0015366:89406-89425 Msa1356050:intron 25.0%
!! AATTTTTGTTGGAACCTATT+GGG + tig0015366:89448-89467 None:intergenic 25.0%
!! TAATTTTTGTTGGAACCTAT+TGG + tig0015366:89449-89468 None:intergenic 25.0%
!! TTAACAGTGGTAATTTTTGT+TGG + tig0015366:89459-89478 None:intergenic 25.0%
! ACAAAAATTACCACTGTTAA+AGG - tig0015366:89459-89478 Msa1356050:intron 25.0%
! CCAAAAAAAGAAAAGAAAGT+GGG + tig0015366:89631-89650 None:intergenic 25.0%
! TCCAAAAAAAGAAAAGAAAG+TGG + tig0015366:89632-89651 None:intergenic 25.0%
!!! TTCTTTTTTTGGAATTTTGC+AGG - tig0015366:89639-89658 Msa1356050:intron 25.0%
! TTTAGATGCAACTACTAATT+GGG - tig0015366:89873-89892 Msa1356050:intron 25.0%
!! CACTTGTCACATAAAATTTT+AGG + tig0015366:90015-90034 None:intergenic 25.0%
!!! TTTCTTGGCTTATTTTTTCT+CGG - tig0015366:90283-90302 Msa1356050:CDS 25.0%
!! TTCTCGGTGAATTTTTATAT+AGG - tig0015366:90299-90318 Msa1356050:CDS 25.0%
! TACGATTCTTTGCAATATTA+AGG - tig0015366:90842-90861 Msa1356050:intron 25.0%
! TATCAAAATATAGTTGAGGA+GGG + tig0015366:90893-90912 None:intergenic 25.0%
! TAGGTATCAAAATATAGTTG+AGG + tig0015366:90897-90916 None:intergenic 25.0%
! TTATATGTTTGAGTGCATTT+CGG - tig0015366:91027-91046 Msa1356050:intron 25.0%
! AATGTAAAATGGTTTACGTT+TGG + tig0015366:91171-91190 None:intergenic 25.0%
!!! TAGGTGTGTATTTGATTTTA+TGG + tig0015366:91227-91246 None:intergenic 25.0%
!! TACATGTTAAGAAAAGTGTA+GGG + tig0015366:91268-91287 None:intergenic 25.0%
!! TTACATGTTAAGAAAAGTGT+AGG + tig0015366:91269-91288 None:intergenic 25.0%
!!! TTCACTTTTTAACATTTCAG+GGG - tig0015366:91343-91362 Msa1356050:CDS 25.0%
! AAATTAAGATTGTTAGGACT+TGG + tig0015366:91630-91649 None:intergenic 25.0%
! AAGTCCTAACAATCTTAATT+TGG - tig0015366:91629-91648 Msa1356050:intron 25.0%
! CATTCCAAATTAAGATTGTT+AGG + tig0015366:91636-91655 None:intergenic 25.0%
! GATATGAAACTTGTATATTC+AGG + tig0015366:91763-91782 None:intergenic 25.0%
!! TCGGTTTTAATGTAAATAGC+TGG + tig0015366:84589-84608 None:intergenic 30.0%
TCTTTCATTTCTCCAAACAT+AGG - tig0015366:84644-84663 Msa1356050:three_prime_UTR 30.0%
!!! AAGGTTTTGTTTCCTATGTT+TGG + tig0015366:84659-84678 None:intergenic 30.0%
! ACCCATGAATTCTTTTGTTA+GGG + tig0015366:84751-84770 None:intergenic 30.0%
! AACCCATGAATTCTTTTGTT+AGG + tig0015366:84752-84771 None:intergenic 30.0%
TTTCCATAAGGAACAAAAAC+AGG + tig0015366:84852-84871 None:intergenic 30.0%
!! ACAACTCTTTTGTTTCCATA+AGG + tig0015366:84864-84883 None:intergenic 30.0%
ATGGAAACAAAAGAGTTGTT+AGG - tig0015366:84865-84884 Msa1356050:CDS 30.0%
GAAGATGATGATATAGAAGA+AGG + tig0015366:84957-84976 None:intergenic 30.0%
! ATCTTGATGCTTTTACTGAT+AGG - tig0015366:85078-85097 Msa1356050:CDS 30.0%
CACTACAGAAAAATCTTACT+TGG + tig0015366:85149-85168 None:intergenic 30.0%
!! TTTACGGTTGACTCAAATTT+TGG - tig0015366:85415-85434 Msa1356050:CDS 30.0%
! TTCATTTTCCTTGCAATTCT+TGG - tig0015366:85527-85546 Msa1356050:intron 30.0%
! TCATTTTCCTTGCAATTCTT+GGG - tig0015366:85528-85547 Msa1356050:intron 30.0%
GAAAAGAAAATTCTCTTTCC+AGG + tig0015366:85574-85593 None:intergenic 30.0%
!!! CTACCTTTTTTTTCCTTACT+GGG + tig0015366:85673-85692 None:intergenic 30.0%
!!! ACTACCTTTTTTTTCCTTAC+TGG + tig0015366:85674-85693 None:intergenic 30.0%
ACTAGTACTAGTAGTCTTTA+TGG - tig0015366:86332-86351 Msa1356050:CDS 30.0%
TATGACACATACAATGATCT+TGG - tig0015366:86694-86713 Msa1356050:intron 30.0%
CAAGATCAATTCCTTTATCT+GGG + tig0015366:86723-86742 None:intergenic 30.0%
ATTGCATTGTATCCTTTAGT+AGG - tig0015366:86870-86889 Msa1356050:intron 30.0%
TTGCATTGTATCCTTTAGTA+GGG - tig0015366:86871-86890 Msa1356050:intron 30.0%
ATAGTTTAACACCCTACTAA+AGG + tig0015366:86885-86904 None:intergenic 30.0%
GATAAAATCACAATAGTCGT+TGG + tig0015366:86987-87006 None:intergenic 30.0%
TACAATGTGCAACTAAAATG+AGG + tig0015366:87098-87117 None:intergenic 30.0%
TTAGTTGCACATTGTATTCT+AGG - tig0015366:87102-87121 Msa1356050:CDS 30.0%
!!! CTATCACACTTTTTTTTCCA+AGG + tig0015366:87296-87315 None:intergenic 30.0%
! GAAAAAAAAGTGTGATAGCT+TGG - tig0015366:87298-87317 Msa1356050:intron 30.0%
TCATCTCTTGGTATATACAT+AGG + tig0015366:87675-87694 None:intergenic 30.0%
! CACTGAAAATGTGTTCATTT+TGG + tig0015366:87712-87731 None:intergenic 30.0%
AATGAATTCTCAGATGTTGA+TGG - tig0015366:87807-87826 Msa1356050:intron 30.0%
CACTCACTTGATATAATCTT+GGG + tig0015366:87960-87979 None:intergenic 30.0%
GTCTTCCTTGCTTAAAAAAT+TGG - tig0015366:88009-88028 Msa1356050:CDS 30.0%
!!! TGTAGCCAATTTTTTAAGCA+AGG + tig0015366:88017-88036 None:intergenic 30.0%
AAGCCCAAAATTTAGTAATG+CGG + tig0015366:88135-88154 None:intergenic 30.0%
!! TTACACTTTTTGTCATTGGA+TGG - tig0015366:88180-88199 Msa1356050:intron 30.0%
GGTGTAATTGGTATATGATT+TGG + tig0015366:88366-88385 None:intergenic 30.0%
TCATATACCAATTACACCAA+AGG - tig0015366:88368-88387 Msa1356050:intron 30.0%
TGGCCATGAATATTCTATAA+TGG - tig0015366:88442-88461 Msa1356050:intron 30.0%
! AACCCAAAAAGATGAGTTTT+CGG - tig0015366:88557-88576 Msa1356050:intron 30.0%
! AACCGAAAACTCATCTTTTT+GGG + tig0015366:88562-88581 None:intergenic 30.0%
ACAATTGATTAGTACAGCTT+TGG + tig0015366:88693-88712 None:intergenic 30.0%
AAATTTATCCTCTGCACATT+AGG + tig0015366:88816-88835 None:intergenic 30.0%
GATCTAATTTACTAACAGGT+GGG + tig0015366:88919-88938 None:intergenic 30.0%
TCAGGATCTAATTTACTAAC+AGG + tig0015366:88923-88942 None:intergenic 30.0%
ATGAATGCATTGTACCAAAA+AGG + tig0015366:89051-89070 None:intergenic 30.0%
TAAAAATGGCGAATCTATCA+TGG - tig0015366:89420-89439 Msa1356050:intron 30.0%
! CCCACTTTCTTTTCTTTTTT+TGG - tig0015366:89628-89647 Msa1356050:intron 30.0%
! TGATATCTACCTTCCATTTT+TGG - tig0015366:89699-89718 Msa1356050:intron 30.0%
! ATATGATTTTCTACCATCCA+AGG + tig0015366:89737-89756 None:intergenic 30.0%
! AAGTGGTGTCAAAAAGTATA+TGG + tig0015366:89770-89789 None:intergenic 30.0%
!! ATATACTTTTTGACACCACT+TGG - tig0015366:89769-89788 Msa1356050:intron 30.0%
CTTTAGATGCAACTACTAAT+TGG - tig0015366:89872-89891 Msa1356050:intron 30.0%
TGTATCAAATTGACATGTGT+CGG - tig0015366:90108-90127 Msa1356050:CDS 30.0%
!! TATTTAAGTTGCATGTGTCA+AGG + tig0015366:90234-90253 None:intergenic 30.0%
! GAAGACATGAACTTATTTCT+TGG - tig0015366:90268-90287 Msa1356050:CDS 30.0%
CTATGAGCAGACAATATAAA+TGG + tig0015366:90349-90368 None:intergenic 30.0%
CATTTATATTGTCTGCTCAT+AGG - tig0015366:90347-90366 Msa1356050:intron 30.0%
!!! GCATCCAATTTTCAAGTTAT+TGG - tig0015366:90384-90403 Msa1356050:intron 30.0%
GGATCCAATAACTTGAAAAT+TGG + tig0015366:90391-90410 None:intergenic 30.0%
!! CTAGGATCTTTAAAACAAAG+CGG + tig0015366:90625-90644 None:intergenic 30.0%
GTATCAAAATATAGTTGAGG+AGG + tig0015366:90894-90913 None:intergenic 30.0%
TTGGACAAATTCACATATAG+TGG + tig0015366:91152-91171 None:intergenic 30.0%
! TTTTTAACATTTCAGGGGAA+TGG - tig0015366:91348-91367 Msa1356050:CDS 30.0%
!! ATTATTAGCTTTAGACCATG+TGG + tig0015366:91394-91413 None:intergenic 30.0%
TTTGGTCAGCAATAGAAAAT+TGG - tig0015366:91449-91468 Msa1356050:CDS 30.0%
TTGGTCAGCAATAGAAAATT+GGG - tig0015366:91450-91469 Msa1356050:CDS 30.0%
AGTAATAGTTCACATAAGTG+CGG + tig0015366:91477-91496 None:intergenic 30.0%
TGATTATTAGGCTTGGATTT+GGG + tig0015366:91501-91520 None:intergenic 30.0%
TTGATTATTAGGCTTGGATT+TGG + tig0015366:91502-91521 None:intergenic 30.0%
! ACTCTCTGTCATTGATTATT+AGG + tig0015366:91513-91532 None:intergenic 30.0%
TATTAATCTTCTCATCAACG+GGG + tig0015366:91725-91744 None:intergenic 30.0%
GTATTAATCTTCTCATCAAC+GGG + tig0015366:91726-91745 None:intergenic 30.0%
GGTATTAATCTTCTCATCAA+CGG + tig0015366:91727-91746 None:intergenic 30.0%
! GTTGATGAGAAGATTAATAC+CGG - tig0015366:91726-91745 Msa1356050:intron 30.0%
! GCATTGAGAAAATACTTTTG+TGG + tig0015366:91790-91809 None:intergenic 30.0%
GTTGCAAGCTACAAAATATA+TGG - tig0015366:91822-91841 Msa1356050:CDS 30.0%
! AGCATTTTATCAATTCTCTG+CGG - tig0015366:91942-91961 Msa1356050:CDS 30.0%
! TTTTATGTGGACACACTATT+TGG + tig0015366:92102-92121 None:intergenic 30.0%
! TCACATTTTGCTAAGCATTA+TGG - tig0015366:92157-92176 Msa1356050:exon 30.0%
! ATTTTGCTAAGCATTATGGT+TGG - tig0015366:92161-92180 Msa1356050:five_prime_UTR 30.0%
ATATTACTAGTAGACATTGG+TGG - tig0015366:92258-92277 Msa1356050:five_prime_UTR 30.0%
TGGAGAAATGAAAGAAGAAG+TGG + tig0015366:84639-84658 None:intergenic 35.0%
!!! GAGGTTTTTTCCTTCTTCTA+AGG + tig0015366:84707-84726 None:intergenic 35.0%
!! ATGAATCACTGGTTTCTTTG+AGG + tig0015366:84726-84745 None:intergenic 35.0%
TCAAAGAAACCAGTGATTCA+TGG - tig0015366:84725-84744 Msa1356050:three_prime_UTR 35.0%
GCCCTAACAAAAGAATTCAT+GGG - tig0015366:84747-84766 Msa1356050:three_prime_UTR 35.0%
AGAATTCATGGGTTCTTCAT+TGG - tig0015366:84758-84777 Msa1356050:three_prime_UTR 35.0%
GGTGATGAAGAAGGAAATAT+TGG + tig0015366:84792-84811 None:intergenic 35.0%
! TGAAAACATGGTGATGAAGA+AGG + tig0015366:84801-84820 None:intergenic 35.0%
CCATTCTTCTGTTGAAAACA+TGG + tig0015366:84813-84832 None:intergenic 35.0%
! CCATGTTTTCAACAGAAGAA+TGG - tig0015366:84810-84829 Msa1356050:CDS 35.0%
! TGTTTTCAACAGAAGAATGG+TGG - tig0015366:84813-84832 Msa1356050:CDS 35.0%
!!! AGTCCTGTTTTTGTTCCTTA+TGG - tig0015366:84846-84865 Msa1356050:CDS 35.0%
!!! AATTTCACTGGTTTTTCAGC+AGG + tig0015366:84990-85009 None:intergenic 35.0%
GCTCTAACCTTAAATTTCAC+TGG + tig0015366:85002-85021 None:intergenic 35.0%
! GATGCTTTTACTGATAGGAT+TGG - tig0015366:85083-85102 Msa1356050:CDS 35.0%
TTTATCACAGTAATTGCTCC+TGG + tig0015366:85445-85464 None:intergenic 35.0%
!! ACAATTGAAGGATTTGCTAC+TGG - tig0015366:85499-85518 Msa1356050:CDS 35.0%
! TTATAAAATCACGGACTGCT+TGG + tig0015366:85895-85914 None:intergenic 35.0%
TCTAACACTCACTCGTTTAT+TGG - tig0015366:86169-86188 Msa1356050:intron 35.0%
TGGAACAATAATCTTACCCT+CGG - tig0015366:86368-86387 Msa1356050:CDS 35.0%
TAAATGCTGAATAATGCCGA+GGG + tig0015366:86387-86406 None:intergenic 35.0%
CTTAGTCAAAAGATCGAGAA+AGG + tig0015366:86481-86500 None:intergenic 35.0%
AAAGACCTGAAAAATCTGAG+AGG - tig0015366:86628-86647 Msa1356050:intron 35.0%
GCAAGATCAATTCCTTTATC+TGG + tig0015366:86724-86743 None:intergenic 35.0%
AAATGTATCCATACCCTAGA+CGG - tig0015366:86767-86786 Msa1356050:intron 35.0%
CATCTAACATCGCACTTTAA+AGG + tig0015366:86916-86935 None:intergenic 35.0%
AAGTGCGATGTTAGATGATT+CGG - tig0015366:86919-86938 Msa1356050:intron 35.0%
! ACATTTGATATGATGGTGTG+TGG - tig0015366:87196-87215 Msa1356050:CDS 35.0%
! CATTTGATATGATGGTGTGT+GGG - tig0015366:87197-87216 Msa1356050:CDS 35.0%
ACACACTAAGTATAGAGAAG+TGG + tig0015366:87240-87259 None:intergenic 35.0%
TTCTAACATAGGATCTTCTC+TGG - tig0015366:87413-87432 Msa1356050:intron 35.0%
! TGTAAAGCATCACAAGATGT+CGG + tig0015366:87454-87473 None:intergenic 35.0%
CTTGGTATATACATAGGAAG+TGG + tig0015366:87669-87688 None:intergenic 35.0%
ACCAAGAGATGAAAGATTTG+AGG - tig0015366:87683-87702 Msa1356050:intron 35.0%
TCCTCAAATCTTTCATCTCT+TGG + tig0015366:87687-87706 None:intergenic 35.0%
! TGAACACATTTTCAGTGAAG+AGG - tig0015366:87715-87734 Msa1356050:intron 35.0%
! TTTTCAGTGAAGAGGCTAAA+AGG - tig0015366:87723-87742 Msa1356050:intron 35.0%
GAGCAGAAAGACTTGATTTA+AGG + tig0015366:87773-87792 None:intergenic 35.0%
TGAGTAGTCCAACACTATAA+AGG + tig0015366:87833-87852 None:intergenic 35.0%
TGTTGGACTACTCATTAAGT+TGG - tig0015366:87839-87858 Msa1356050:intron 35.0%
GTTGGACTACTCATTAAGTT+GGG - tig0015366:87840-87859 Msa1356050:intron 35.0%
TCTTGGGAATGTCATACTTA+AGG + tig0015366:87944-87963 None:intergenic 35.0%
CCACTCACTTGATATAATCT+TGG + tig0015366:87961-87980 None:intergenic 35.0%
CCAAGATTATATCAAGTGAG+TGG - tig0015366:87958-87977 Msa1356050:CDS 35.0%
TTTCCCTTTCATTTGCAATG+TGG - tig0015366:88410-88429 Msa1356050:intron 35.0%
! TGTAGCACTATCTTTTCAGA+TGG + tig0015366:88480-88499 None:intergenic 35.0%
! GAACCGAAAACTCATCTTTT+TGG + tig0015366:88563-88582 None:intergenic 35.0%
GAAAACTGTAAGTCTCTCAA+TGG + tig0015366:88897-88916 None:intergenic 35.0%
GGATCTAATTTACTAACAGG+TGG + tig0015366:88920-88939 None:intergenic 35.0%
TTTAAATGGTACCTCTTGGA+CGG + tig0015366:89011-89030 None:intergenic 35.0%
! ATGCTTTAAATGGTACCTCT+TGG + tig0015366:89015-89034 None:intergenic 35.0%
AATTCACAAGGCACATGATT+AGG + tig0015366:89093-89112 None:intergenic 35.0%
TTATAATGGTCACCAATAGG+TGG - tig0015366:89208-89227 Msa1356050:CDS 35.0%
AGGCAACTAACTCTTGTATA+TGG - tig0015366:89385-89404 Msa1356050:intron 35.0%
GTATCATTGTCCTTTAACAG+TGG + tig0015366:89472-89491 None:intergenic 35.0%
!! TCTACCTTCCATTTTTGGAA+AGG - tig0015366:89704-89723 Msa1356050:intron 35.0%
TGATCCTTTCCAAAAATGGA+AGG + tig0015366:89711-89730 None:intergenic 35.0%
! GCATTGATCCTTTCCAAAAA+TGG + tig0015366:89715-89734 None:intergenic 35.0%
! CAAAAAGTATATGGTACGTG+TGG + tig0015366:89761-89780 None:intergenic 35.0%
! TTAGTAGTTGCATCTAAAGC+AGG + tig0015366:89871-89890 None:intergenic 35.0%
ATTGTATGCTTGCTTACCAA+TGG + tig0015366:89960-89979 None:intergenic 35.0%
CGAAAACAATTGATGTACAG+AGG + tig0015366:90699-90718 None:intergenic 35.0%
AAAATAAGGGTCTGTGATTG+TGG - tig0015366:90792-90811 Msa1356050:intron 35.0%
AAATACACACCTAGCTTCTA+CGG - tig0015366:91234-91253 Msa1356050:intron 35.0%
CAGAAGATGGTCTTCTAATT+TGG - tig0015366:91431-91450 Msa1356050:CDS 35.0%
! CTGTCATTGATTATTAGGCT+TGG + tig0015366:91508-91527 None:intergenic 35.0%
TACTCCGAATCAATCAATGT+AGG - tig0015366:91544-91563 Msa1356050:CDS 35.0%
TTGTCACTGTCGTTCAATTT+CGG + tig0015366:91601-91620 None:intergenic 35.0%
CAACATGCTGCACTTAATTT+CGG - tig0015366:91664-91683 Msa1356050:intron 35.0%
AATTTCGGACAGTATCCTTA+TGG - tig0015366:91679-91698 Msa1356050:intron 35.0%
ATTAATCTTCTCATCAACGG+GGG + tig0015366:91724-91743 None:intergenic 35.0%
!! TATTCAGGGTCATTTTCTTC+CGG + tig0015366:91748-91767 None:intergenic 35.0%
! TTTGTAGCTTGCAACAAACT+AGG + tig0015366:91817-91836 None:intergenic 35.0%
TATCAATTCTCTGCGGAAAT+TGG - tig0015366:91949-91968 Msa1356050:CDS 35.0%
GGAAATTGGAAAGATTGAGA+AGG - tig0015366:91963-91982 Msa1356050:CDS 35.0%
! TTGAGAAGGTGATTGATAGT+AGG - tig0015366:91977-91996 Msa1356050:CDS 35.0%
! AAGGTGATTGATAGTAGGAA+TGG - tig0015366:91982-92001 Msa1356050:CDS 35.0%
! TTGATAGTAGGAATGGTGAT+AGG - tig0015366:91989-92008 Msa1356050:CDS 35.0%
CTAGGAGCAAGTAATTCATA+AGG + tig0015366:92048-92067 None:intergenic 35.0%
TGCAATCACTCACTGAAAAA+TGG + tig0015366:92345-92364 None:intergenic 35.0%
AGTGAGTGATTGCAAAAATC+TGG - tig0015366:92351-92370 Msa1356050:five_prime_UTR 35.0%
GAACAGTGAGAAATGGTTAG+TGG + tig0015366:84617-84636 None:intergenic 40.0%
AGAAGTGGAACAGTGAGAAA+TGG + tig0015366:84624-84643 None:intergenic 40.0%
GGCCCTAACAAAAGAATTCA+TGG - tig0015366:84746-84765 Msa1356050:three_prime_UTR 40.0%
TTAGAGCTGTTGTAACAGTG+AGG - tig0015366:85015-85034 Msa1356050:CDS 40.0%
AGTGAGGAACAAGATCAAAG+AGG - tig0015366:85031-85050 Msa1356050:CDS 40.0%
ATCCTTCAACACTGCTTCAT+TGG + tig0015366:85344-85363 None:intergenic 40.0%
! ATGAAGCAGTGTTGAAGGAT+TGG - tig0015366:85344-85363 Msa1356050:CDS 40.0%
!! GACTCAAATTTTGGAGAACC+AGG - tig0015366:85424-85443 Msa1356050:CDS 40.0%
CAAGCTAGAAAAGATCTTCC+TGG - tig0015366:85553-85572 Msa1356050:intron 40.0%
TGGCCCAGTAAGGAAAAAAA+AGG - tig0015366:85667-85686 Msa1356050:intron 40.0%
TAGTCGTCAGGTCAATTCAA+TGG + tig0015366:86031-86050 None:intergenic 40.0%
GACTACCTACGGTATGAATT+GGG - tig0015366:86046-86065 Msa1356050:intron 40.0%
ACTAGTAGTCTTTATGGTCG+AGG - tig0015366:86338-86357 Msa1356050:CDS 40.0%
TTTATGGTCGAGGATGAATG+TGG - tig0015366:86348-86367 Msa1356050:CDS 40.0%
GTAAATGCTGAATAATGCCG+AGG + tig0015366:86388-86407 None:intergenic 40.0%
CTCAAAAGTTTAATCCCAGC+AGG + tig0015366:86604-86623 None:intergenic 40.0%
! CATCACCTCTCAGATTTTTC+AGG + tig0015366:86636-86655 None:intergenic 40.0%
CTGAAAAATCTGAGAGGTGA+TGG - tig0015366:86634-86653 Msa1356050:intron 40.0%
!! AATCTGAGAGGTGATGGAAA+AGG - tig0015366:86640-86659 Msa1356050:intron 40.0%
GATCTTGGAAACCCAGATAA+AGG - tig0015366:86709-86728 Msa1356050:intron 40.0%
ATTTCAGATCCTCCAAGAGT+TGG + tig0015366:86751-86770 None:intergenic 40.0%
TACCTGTATCAGATGGTTCA+CGG + tig0015366:86804-86823 None:intergenic 40.0%
AGTGCGATGTTAGATGATTC+GGG - tig0015366:86920-86939 Msa1356050:intron 40.0%
CATCTTGTGATGCTTTACAG+TGG - tig0015366:87455-87474 Msa1356050:intron 40.0%
TATTACTTGTGAGAGTCGTG+TGG - tig0015366:87638-87657 Msa1356050:intron 40.0%
! GAAAGACTTGATTTAAGGCC+AGG + tig0015366:87768-87787 None:intergenic 40.0%
!! GTTGATGGCCTTTATAGTGT+TGG - tig0015366:87822-87841 Msa1356050:intron 40.0%
TTGCTAACAATGTGAGGCAA+TGG + tig0015366:87894-87913 None:intergenic 40.0%
TGGATCTTGCTAACAATGTG+AGG + tig0015366:87900-87919 None:intergenic 40.0%
TGTCATACTTAAGGATACCC+TGG + tig0015366:87935-87954 None:intergenic 40.0%
CCACCACATTGCAAATGAAA+GGG + tig0015366:88416-88435 None:intergenic 40.0%
CCTTTCATTTGCAATGTGGT+GGG - tig0015366:88414-88433 Msa1356050:intron 40.0%
CTTTCATTTGCAATGTGGTG+GGG - tig0015366:88415-88434 Msa1356050:intron 40.0%
CCAAACAACATGTTGTAGTG+TGG + tig0015366:88515-88534 None:intergenic 40.0%
CCACACTACAACATGTTGTT+TGG - tig0015366:88512-88531 Msa1356050:intron 40.0%
! GTGCAGAGGATAAATTTGCT+TGG - tig0015366:88819-88838 Msa1356050:intron 40.0%
TAACTCCAGCTATTGCTTGA+CGG + tig0015366:88865-88884 None:intergenic 40.0%
GTAAGTCTCTCAATGGTAAC+AGG + tig0015366:88890-88909 None:intergenic 40.0%
TCTTGTGGACCATAGATTTC+AGG + tig0015366:88941-88960 None:intergenic 40.0%
TCTTTAAGTGCAGACTCTTG+TGG + tig0015366:88956-88975 None:intergenic 40.0%
AGGCACATGATTAGGTAACA+TGG + tig0015366:89085-89104 None:intergenic 40.0%
ACTTGAACCAAACCACCTAT+TGG + tig0015366:89223-89242 None:intergenic 40.0%
GGTTCAAGTAGTGAGTGATT+TGG - tig0015366:89234-89253 Msa1356050:CDS 40.0%
AACATATTGTGTACGTCCTG+AGG - tig0015366:89365-89384 Msa1356050:intron 40.0%
ATACAAGAGTTAGTTGCCTC+AGG + tig0015366:89384-89403 None:intergenic 40.0%
AATCTATCATGGTGCCCAAT+AGG - tig0015366:89431-89450 Msa1356050:intron 40.0%
! GTGCATTCAAGAGCATACAT+AGG + tig0015366:89539-89558 None:intergenic 40.0%
TTTGGAAAGGATCAATGCCT+TGG - tig0015366:89717-89736 Msa1356050:intron 40.0%
AGGCTAAGTTCAATTGCAAC+AGG + tig0015366:89805-89824 None:intergenic 40.0%
!! ACACGTTTTGATCGAGTGTT+TGG + tig0015366:89841-89860 None:intergenic 40.0%
ATGCAACTACTAATTGGGTG+TGG - tig0015366:89878-89897 Msa1356050:intron 40.0%
TATGCTTGCTTACCAATGGT+GGG + tig0015366:89956-89975 None:intergenic 40.0%
AAGACATTTACACTCACACG+TGG - tig0015366:90039-90058 Msa1356050:intron 40.0%
GTGAAAAGACATTGCGACAT+AGG - tig0015366:90151-90170 Msa1356050:CDS 40.0%
AGTTATTGGATCCACACATG+AGG - tig0015366:90398-90417 Msa1356050:intron 40.0%
AATGCGCCTCAAATGGTAAA+AGG + tig0015366:90725-90744 None:intergenic 40.0%
TTAGACCATGTGGTTGTGTT+GGG + tig0015366:91384-91403 None:intergenic 40.0%
TTTAGACCATGTGGTTGTGT+TGG + tig0015366:91385-91404 None:intergenic 40.0%
GATTACCCTTATGCAGAAGA+TGG - tig0015366:91418-91437 Msa1356050:CDS 40.0%
GAAGACCATCTTCTGCATAA+GGG + tig0015366:91426-91445 None:intergenic 40.0%
AGAAGACCATCTTCTGCATA+AGG + tig0015366:91427-91446 None:intergenic 40.0%
ATGACAGAGAGTTACAAGCT+TGG - tig0015366:91521-91540 Msa1356050:CDS 40.0%
! GTGGCCTACATTGATTGATT+CGG + tig0015366:91551-91570 None:intergenic 40.0%
CCATGGTTCGTCTTTCATAT+CGG + tig0015366:91575-91594 None:intergenic 40.0%
ATATGAAAGACGAACCATGG+TGG - tig0015366:91575-91594 Msa1356050:intron 40.0%
!! TCGTCTGACGAAGAGTATTT+AGG - tig0015366:91871-91890 Msa1356050:CDS 40.0%
!! ACGAAGAGTATTTAGGTGAG+AGG - tig0015366:91878-91897 Msa1356050:CDS 40.0%
GGAATGGTGATAGGAATTTG+AGG - tig0015366:91998-92017 Msa1356050:CDS 40.0%
GAATTACTTGCTCCTAGTTC+TGG - tig0015366:92051-92070 Msa1356050:CDS 40.0%
TGCTAAGCATTATGGTTGGT+TGG - tig0015366:92165-92184 Msa1356050:five_prime_UTR 40.0%
GAAATGGTTAGTGGTCGTGT+CGG + tig0015366:84608-84627 None:intergenic 45.0%
TTGTTAGGGCCATGAATCAC+TGG + tig0015366:84737-84756 None:intergenic 45.0%
TCTTCACTGATAGCTGCAAC+AGG + tig0015366:84912-84931 None:intergenic 45.0%
! GACCAATGAAGCAGTGTTGA+AGG - tig0015366:85339-85358 Msa1356050:CDS 45.0%
GCTTGAACCCAAGAATTGCA+AGG + tig0015366:85538-85557 None:intergenic 45.0%
CATCATAACATGGCCCAGTA+AGG - tig0015366:85657-85676 Msa1356050:intron 45.0%
!! AATCACGGACTGCTTGGTTT+TGG + tig0015366:85889-85908 None:intergenic 45.0%
CAGGTCAATTCAATGGTGCT+TGG + tig0015366:86024-86043 None:intergenic 45.0%
ATTGACCTGACGACTACCTA+CGG - tig0015366:86035-86054 Msa1356050:intron 45.0%
CGACTACCTACGGTATGAAT+TGG - tig0015366:86045-86064 Msa1356050:intron 45.0%
CTTTGCCCAATTCATACCGT+AGG + tig0015366:86054-86073 None:intergenic 45.0%
GGTGTATCATCGGGTAGATA+AGG + tig0015366:86583-86602 None:intergenic 45.0%
AATCCCAGCAGGTGTATCAT+CGG + tig0015366:86593-86612 None:intergenic 45.0%
GATCTTGCTAGACCAACTCT+TGG - tig0015366:86736-86755 Msa1356050:intron 45.0%
ATTTCGCTGCAAATCTCCCT+TGG - tig0015366:87276-87295 Msa1356050:intron 45.0%
ATCTTCTCTGGACCAACTTG+TGG - tig0015366:87425-87444 Msa1356050:intron 45.0%
TCTTCTCTGGACCAACTTGT+GGG - tig0015366:87426-87445 Msa1356050:intron 45.0%
! GATGCTTTACAGTGGTGTCA+TGG - tig0015366:87463-87482 Msa1356050:intron 45.0%
!! GTGCTTCATAACTTGCTTCC+TGG - tig0015366:87747-87766 Msa1356050:intron 45.0%
ATCCAAGAATCCACAAGCCA+GGG - tig0015366:87915-87934 Msa1356050:CDS 45.0%
CCCTTTCATTTGCAATGTGG+TGG - tig0015366:88413-88432 Msa1356050:intron 45.0%
CCCACCACATTGCAAATGAA+AGG + tig0015366:88417-88436 None:intergenic 45.0%
AACTCCAGCTATTGCTTGAC+GGG + tig0015366:88864-88883 None:intergenic 45.0%
ATGGTCACCAATAGGTGGTT+TGG - tig0015366:89213-89232 Msa1356050:CDS 45.0%
GGTCAGAGATTTGACTACTC+AGG - tig0015366:89272-89291 Msa1356050:intron 45.0%
GAAAGGATCAATGCCTTGGA+TGG - tig0015366:89721-89740 Msa1356050:intron 45.0%
!! ACAGGCTTTAGAGTACCAAG+TGG + tig0015366:89787-89806 None:intergenic 45.0%
CATGTTTGCTCCAATGATGC+TGG - tig0015366:89916-89935 Msa1356050:intron 45.0%
GTATGCTTGCTTACCAATGG+TGG + tig0015366:89957-89976 None:intergenic 45.0%
TCCACACATGAGGTACACTT+TGG - tig0015366:90408-90427 Msa1356050:intron 45.0%
TCCAAAGTGTACCTCATGTG+TGG + tig0015366:90412-90431 None:intergenic 45.0%
CAGAGCTTGATCAATGCAGA+TGG - tig0015366:90451-90470 Msa1356050:intron 45.0%
ATTGAGTCTTGCTTCACTCC+TGG - tig0015366:90478-90497 Msa1356050:intron 45.0%
AGCAGCAGAACTAATCTCCA+TGG + tig0015366:90512-90531 None:intergenic 45.0%
! CTGCTGCTTACAAAACCAAC+TGG - tig0015366:90524-90543 Msa1356050:intron 45.0%
CGAAACTCACACACGCAATA+CGG - tig0015366:90647-90666 Msa1356050:intron 45.0%
! TCGCTGCCTTTTACCATTTG+AGG - tig0015366:90716-90735 Msa1356050:intron 45.0%
! TACCATTTGAGGCGCATTGT+TGG - tig0015366:90727-90746 Msa1356050:intron 45.0%
AACCAACAATGCGCCTCAAA+TGG + tig0015366:90732-90751 None:intergenic 45.0%
!!! TTGAGGAGGGTTTTAGAGAG+TGG + tig0015366:90880-90899 None:intergenic 45.0%
! GTCTCTTTTCCGTAGAAGCT+AGG + tig0015366:91246-91265 None:intergenic 45.0%
CCGATATGAAAGACGAACCA+TGG - tig0015366:91572-91591 Msa1356050:intron 45.0%
ATTAAGTGCAGCATGTTGCG+CGG + tig0015366:91662-91681 None:intergenic 45.0%
TTCGGACAGTATCCTTATGG+AGG - tig0015366:91682-91701 Msa1356050:intron 45.0%
TTTGGCACGTAACCTCCATA+AGG + tig0015366:91697-91716 None:intergenic 45.0%
AGAGGCAACAACCTTCGATT+TGG - tig0015366:91896-91915 Msa1356050:CDS 45.0%
!! CAACAACCTTCGATTTGGAC+AGG - tig0015366:91901-91920 Msa1356050:CDS 45.0%
AGGAATTTGAGGAACCGTTG+CGG - tig0015366:92009-92028 Msa1356050:CDS 45.0%
!!! GTAATTTTTTTATATATAAA+AGG + tig0015366:88616-88635 None:intergenic 5.0%
!! TAAATATCATATATTAATTT+CGG - tig0015366:90589-90608 Msa1356050:intron 5.0%
TCATACCGTAGGTAGTCGTC+AGG + tig0015366:86043-86062 None:intergenic 50.0%
TACCCGATGATACACCTGCT+GGG - tig0015366:86587-86606 Msa1356050:intron 50.0%
ATCCCAGCAGGTGTATCATC+GGG + tig0015366:86592-86611 None:intergenic 50.0%
CTTGCTAGACCAACTCTTGG+AGG - tig0015366:86739-86758 Msa1356050:intron 50.0%
GATCCAAGAATCCACAAGCC+AGG - tig0015366:87914-87933 Msa1356050:CDS 50.0%
! TACCCTGGCTTGTGGATTCT+TGG + tig0015366:87920-87939 None:intergenic 50.0%
! CTTAAGGATACCCTGGCTTG+TGG + tig0015366:87928-87947 None:intergenic 50.0%
! TTGCAATGTGGTGGGGTCTT+TGG - tig0015366:88422-88441 Msa1356050:intron 50.0%
CTCATGTGCCTAATGTGCAG+AGG - tig0015366:88805-88824 Msa1356050:intron 50.0%
TTTGCCCGTCAAGCAATAGC+TGG - tig0015366:88857-88876 Msa1356050:intron 50.0%
TAATGGCATGACCGTCCAAG+AGG - tig0015366:88997-89016 Msa1356050:CDS 50.0%
GATCGAGTGTTTGGTCCAGA+TGG + tig0015366:89832-89851 None:intergenic 50.0%
TTGGTGCACACCAGCATCAT+TGG + tig0015366:89929-89948 None:intergenic 50.0%
!! CTTACCAATGGTGGGCAAGT+TGG + tig0015366:89948-89967 None:intergenic 50.0%
!! AACCAACTGGCGTTTTGACC+AGG - tig0015366:90537-90556 Msa1356050:intron 50.0%
ATCCTGGTCAAAACGCCAGT+TGG + tig0015366:90542-90561 None:intergenic 50.0%
ACCTGCGGATGAGATCTTGA+GGG + tig0015366:90570-90589 None:intergenic 50.0%
TACCTGCGGATGAGATCTTG+AGG + tig0015366:90571-90590 None:intergenic 50.0%
GCGTGTGTGAGTTTCGTTCT+AGG + tig0015366:90643-90662 None:intergenic 50.0%
GTTCGTCTTTCATATCGGCG+TGG + tig0015366:91570-91589 None:intergenic 50.0%
TCGTTCAATTTCGGCCACCA+TGG + tig0015366:91592-91611 None:intergenic 50.0%
GCATCACCTGTCCAAATCGA+AGG + tig0015366:91910-91929 None:intergenic 50.0%
GTAACACCAGGTCCAGAACT+AGG + tig0015366:92066-92085 None:intergenic 50.0%
!! GACCTGGTGTTACATGCAGA+GGG - tig0015366:92073-92092 Msa1356050:CDS 50.0%
!! ACCTGGTGTTACATGCAGAG+GGG - tig0015366:92074-92093 Msa1356050:CDS 50.0%
CTACCCGATGATACACCTGC+TGG - tig0015366:86586-86605 Msa1356050:intron 55.0%
CAGATGGTTCACGGCCAGTA+CGG + tig0015366:86795-86814 None:intergenic 55.0%
GGCCGTGAACCATCTGATAC+AGG - tig0015366:86799-86818 Msa1356050:intron 55.0%
! AGATGTCGGTGCCCACAAGT+TGG + tig0015366:87440-87459 None:intergenic 55.0%
GAACTTAGCCTGCCTCCATC+TGG - tig0015366:89814-89833 Msa1356050:intron 55.0%
TGTTTGGTCCAGATGGAGGC+AGG + tig0015366:89825-89844 None:intergenic 55.0%
CGAGTGTTTGGTCCAGATGG+AGG + tig0015366:89829-89848 None:intergenic 55.0%
TGCACCAACTTGCCCACCAT+TGG - tig0015366:89941-89960 Msa1356050:intron 55.0%
GCTACGCACACATGCTTGCA+TGG - tig0015366:90321-90340 Msa1356050:intron 55.0%
ATCTCCATGGCATAGCGACC+AGG + tig0015366:90499-90518 None:intergenic 55.0%
GATCTTGAGGGAGGCTATCC+TGG + tig0015366:90558-90577 None:intergenic 55.0%
TGCGGATGAGATCTTGAGGG+AGG + tig0015366:90567-90586 None:intergenic 55.0%
TCCCTCAAGATCTCATCCGC+AGG - tig0015366:90566-90585 Msa1356050:intron 55.0%
CCATGTGGTTGTGTTGGGTC+TGG + tig0015366:91379-91398 None:intergenic 55.0%
CCAGACCCAACACAACCACA+TGG - tig0015366:91376-91395 Msa1356050:CDS 55.0%
CTCATCAACGGGGGACGATT+TGG + tig0015366:91715-91734 None:intergenic 55.0%
GCAAAACACCAGCACCGCAA+CGG + tig0015366:92026-92045 None:intergenic 55.0%
!! CTTGCTCCTAGTTCTGGACC+TGG - tig0015366:92057-92076 Msa1356050:CDS 55.0%
!! GGACCTGGTGTTACATGCAG+AGG - tig0015366:92072-92091 Msa1356050:CDS 55.0%
ACCCCTCTGCATGTAACACC+AGG + tig0015366:92078-92097 None:intergenic 55.0%
! GTACGGCACCGTCTAGGGTA+TGG + tig0015366:86778-86797 None:intergenic 60.0%
!! TACCCTAGACGGTGCCGTAC+TGG - tig0015366:86778-86797 Msa1356050:intron 60.0%
CACTCCTGGTCGCTATGCCA+TGG - tig0015366:90492-90511 Msa1356050:intron 60.0%
TTGAGGAACCGTTGCGGTGC+TGG - tig0015366:92015-92034 Msa1356050:CDS 60.0%
GGCCAGTACGGCACCGTCTA+GGG + tig0015366:86783-86802 None:intergenic 65.0%
CGGCCAGTACGGCACCGTCT+AGG + tig0015366:86784-86803 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
tig0015366 gene 84509 92394 84509 ID=Msa1356050;Name=Msa1356050
tig0015366 mRNA 84509 92394 84509 ID=Msa1356050-mRNA-1;Parent=Msa1356050;Name=Msa1356050-mRNA-1;_AED=0.03;_eAED=0.03;_QI=235|0.85|0.87|1|1|1|8|275|911
tig0015366 exon 84509 85540 84509 ID=Msa1356050-mRNA-1:exon:9700;Parent=Msa1356050-mRNA-1
tig0015366 exon 86316 86534 86316 ID=Msa1356050-mRNA-1:exon:9699;Parent=Msa1356050-mRNA-1
tig0015366 exon 86941 87242 86941 ID=Msa1356050-mRNA-1:exon:9698;Parent=Msa1356050-mRNA-1
tig0015366 exon 87885 88078 87885 ID=Msa1356050-mRNA-1:exon:9697;Parent=Msa1356050-mRNA-1
tig0015366 exon 88931 89266 88931 ID=Msa1356050-mRNA-1:exon:9696;Parent=Msa1356050-mRNA-1
tig0015366 exon 90083 90323 90083 ID=Msa1356050-mRNA-1:exon:9695;Parent=Msa1356050-mRNA-1
tig0015366 exon 91303 91583 91303 ID=Msa1356050-mRNA-1:exon:9694;Parent=Msa1356050-mRNA-1
tig0015366 exon 91754 92394 91754 ID=Msa1356050-mRNA-1:exon:9693;Parent=Msa1356050-mRNA-1
tig0015366 five_prime_UTR 92160 92394 92160 ID=Msa1356050-mRNA-1:five_prime_utr;Parent=Msa1356050-mRNA-1
tig0015366 CDS 91754 92159 91754 ID=Msa1356050-mRNA-1:cds;Parent=Msa1356050-mRNA-1
tig0015366 CDS 91303 91583 91303 ID=Msa1356050-mRNA-1:cds;Parent=Msa1356050-mRNA-1
tig0015366 CDS 90083 90323 90083 ID=Msa1356050-mRNA-1:cds;Parent=Msa1356050-mRNA-1
tig0015366 CDS 88931 89266 88931 ID=Msa1356050-mRNA-1:cds;Parent=Msa1356050-mRNA-1
tig0015366 CDS 87885 88078 87885 ID=Msa1356050-mRNA-1:cds;Parent=Msa1356050-mRNA-1
tig0015366 CDS 86941 87242 86941 ID=Msa1356050-mRNA-1:cds;Parent=Msa1356050-mRNA-1
tig0015366 CDS 86316 86534 86316 ID=Msa1356050-mRNA-1:cds;Parent=Msa1356050-mRNA-1
tig0015366 CDS 84784 85540 84784 ID=Msa1356050-mRNA-1:cds;Parent=Msa1356050-mRNA-1
tig0015366 three_prime_UTR 84509 84783 84509 ID=Msa1356050-mRNA-1:three_prime_utr;Parent=Msa1356050-mRNA-1
Gene Sequence

>Msa1356050

ATGGCCCTAACAAAAGAATTCATGGGTTCTTCATTGGTAGAGAGACCAATATTTCCTTCTTCATCACCATGTTTTCAACAGAAGAATGGTGGATTCTTGATCAGTCCTGTTTTTGTTCCTTATGGAAACAAAAGAGTTGTTAGGTTGAGAAAATCTGCAAAGTTTCCTGTTGCAGCTATCAGTGAAGATTTGATGAAAAACTCTTCTTCACCTTCTTCTATATCATCATCTTCTTCTTCTGTTCCTGCTGAAAAACCAGTGAAATTTAAGGTTAGAGCTGTTGTAACAGTGAGGAACAAGATCAAAGAGGATTTCAAAGAGACTTTTGTGAAACATCTTGATGCTTTTACTGATAGGATTGGAAGAAATGTTGTTCTTGAACTTTTTAGCATTGAGATTGATCCAAAAACAAAAGCTGCAAAGAAGACCAATGAAGCAGTGTTGAAGGATTGGTCAAAGAAGACTAATATTAAGGCAGAGAGAGTTAATTACACAGCTGAATTTACGGTTGACTCAAATTTTGGAGAACCAGGAGCAATTACTGTGATAAATAATCATCAACAAGAATTTTACTTAGAAAATATAACAATTGAAGGATTTGCTACTGGAGCATTTCATTTTCCTTGCAATTCTTGGGTTCAAGCTAGAAAAGATCTTCCTGGAAAGAGAATTTTCTTTTCTAATAAGCCTTATCTACCCGATGATACACCTGCTGGGATTAAACTTTTGAGAGAGAAAGACCTGAAAAATCTGAGAGGTGATGGAAAAGGAGTTAGAAAATTATCTGACAGAATATATGATTATGACACATACAATGATCTTGGAAACCCAGATAAAGGAATTGATCTTGCTAGACCAACTCTTGGAGGATCTGAAATGTATCCATACCCTAGACGGTGCCGTACTGGCCGTGAACCATCTGATACAGATATTACTTGTGAGAGTCGTGTGGAGAAGCCACTTCCTATGTATATACCAAGAGATGAAAGATTTGAGGAATCCAAAATGAACACATTTTCAGTGAAGAGGCTAAAAGGAGTGCTTCATAACTTGCTTCCTGGCCTTAAATCAAGTCTTTCTGCTCAAAACAGAGATTTCAATGAATTCTCAGATGTTGATGGCCTTTATAGTGTTGGACTACTCATTAAGTTGGGTTTGCAAGATGATATTTTGAAGAAACTTCCATTGCCTCACATTGTTAGCAAGATCCAAGAATCCACAAGCCAGGGTATCCTTAAGTATGACATTCCCAAGATTATATCAAAGGATAAATTTGCTTGGTTGAGAGATGATGAATTTGCCCGTCAAGCAATAGCTGGAGTTAATCCTGTTACCATTGAGAGACTTACAGTTTTCCCACCTGTTAGTAAATTAGATCCTGAAATCTATGGTCCACAAGAGTCTGCACTTAAAGAAGAGCACATTTTAAATCAACTTAATGGCATGACCGTCCAAGAGGCAATAGATCAAAATAAGTTGTTTATAATTGATTATCATGATATCTACCTTCCATTTTTGGAAAGGATCAATGCCTTGGATGGTAGAAAATCATATGCCACACGTACCATATACTTTTTGACACCACTTGGTACTCTAAAGCCTGTTGCAATTGAACTTAGCCTGCCTCCATCTGGACCAAACACTCGATCAAAACGTGTAGTTACACCTGCTTTAGATGCAACTACTAATTGGGTGTGGATGCTTGCAAAAGCTCATGTTTGCTCCAATGATGCTGGTGTGCACCAACTTGCCCACCATTGGCAATTAAGTGCAATGCATCCAATTTTCAAGTTATTGGATCCACACATGAGGTACACTTTGGAGATCAATGCTTTAGCTCGACAGAGCTTGATCAATGCAGATGGTGTCATTGAGTCTTGCTTCACTCCTGGTCGCTATGCCATGGAGATTAGTTCTGCTGCTTACAAAACCAACTGGCGTTTTGACCAGGATAGCCTCCCTCAAGATCTCATCCGCAGGGGAATGGCAGTACCAGACCCAACACAACCACATGGTCTAAAGCTAATAATGAAAGATTACCCTTATGCAGAAGATGGTCTTCTAATTTGGTCAGCAATAGAAAATTGGGTCCGCACTTATGTGAACTATTACTACCCAAATCCAAGCCTAATAATCAATGACAGAGAGTTACAAGCTTGGTACTCCGAATCAATCAATGTAGGCCACGCCGATATGAAAGACGAACCATGGTGGCCGAAATTGAACGACAGTGACAATCTTGTCCAAGTCCTAACAATCTTAATTTGGAATGCATCCGCGCAACATGCTGCACTTAATTTCGGACAGTATCCTTATGGAGGTTACGTGCCAAATCGTCCCCCGTTGATGAGAAGATTAATACCGGAAGAAAATGACCCTGAATATACAAGTTTCATATCTGATCCACAAAAGTATTTTCTCAATGCATTGCCTAGTTTGTTGCAAGCTACAAAATATATGGCTGTTGTTGACACGCTTTCGACTCATTCGTCTGACGAAGAGTATTTAGGTGAGAGGCAACAACCTTCGATTTGGACAGGTGATGCTGAGATTGTCGAAGCATTTTATCAATTCTCTGCGGAAATTGGAAAGATTGAGAAGGTGATTGATAGTAGGAATGGTGATAGGAATTTGAGGAACCGTTGCGGTGCTGGTGTTTTGCCTTATGAATTACTTGCTCCTAGTTCTGGACCTGGTGTTACATGCAGAGGGGTTCCAAATAGTGTGTCCACATAA
Protein sequence

>Msa1356050

MALTKEFMGSSLVERPIFPSSSPCFQQKNGGFLISPVFVPYGNKRVVRLRKSAKFPVAAISEDLMKNSSSPSSISSSSSSVPAEKPVKFKVRAVVTVRNKIKEDFKETFVKHLDAFTDRIGRNVVLELFSIEIDPKTKAAKKTNEAVLKDWSKKTNIKAERVNYTAEFTVDSNFGEPGAITVINNHQQEFYLENITIEGFATGAFHFPCNSWVQARKDLPGKRIFFSNKPYLPDDTPAGIKLLREKDLKNLRGDGKGVRKLSDRIYDYDTYNDLGNPDKGIDLARPTLGGSEMYPYPRRCRTGREPSDTDITCESRVEKPLPMYIPRDERFEESKMNTFSVKRLKGVLHNLLPGLKSSLSAQNRDFNEFSDVDGLYSVGLLIKLGLQDDILKKLPLPHIVSKIQESTSQGILKYDIPKIISKDKFAWLRDDEFARQAIAGVNPVTIERLTVFPPVSKLDPEIYGPQESALKEEHILNQLNGMTVQEAIDQNKLFIIDYHDIYLPFLERINALDGRKSYATRTIYFLTPLGTLKPVAIELSLPPSGPNTRSKRVVTPALDATTNWVWMLAKAHVCSNDAGVHQLAHHWQLSAMHPIFKLLDPHMRYTLEINALARQSLINADGVIESCFTPGRYAMEISSAAYKTNWRFDQDSLPQDLIRRGMAVPDPTQPHGLKLIMKDYPYAEDGLLIWSAIENWVRTYVNYYYPNPSLIINDRELQAWYSESINVGHADMKDEPWWPKLNDSDNLVQVLTILIWNASAQHAALNFGQYPYGGYVPNRPPLMRRLIPEENDPEYTSFISDPQKYFLNALPSLLQATKYMAVVDTLSTHSSDEEYLGERQQPSIWTGDAEIVEAFYQFSAEIGKIEKVIDSRNGDRNLRNRCGAGVLPYELLAPSSGPGVTCRGVPNSVST*