AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1239320

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1239320 MtrunA17_Chr8g0351031 94.196 224 13 0 1 224 1 224 1.15e-153 425
Msa1239320 MtrunA17_Chr8g0351041 91.304 161 14 0 1 161 1 161 6.14e-105 300
Msa1239320 MtrunA17_Chr7g0246431 66.981 212 66 3 1 212 1 208 6.01e-95 276
Msa1239320 MtrunA17_Chr4g0057151 58.065 217 76 4 1 216 1 203 1.66e-77 231
Msa1239320 MtrunA17_Chr3g0097101 43.868 212 111 3 1 210 16 221 1.29e-51 167
Msa1239320 MtrunA17_Chr2g0284911 49.704 169 84 1 3 171 18 185 1.17e-50 165
Msa1239320 MtrunA17_Chr8g0351051 42.081 221 114 3 1 210 1 218 8.99e-49 160
Msa1239320 MtrunA17_Chr3g0077501 47.368 171 89 1 1 171 1 170 4.23e-48 157
Msa1239320 MtrunA17_Chr8g0380021 47.929 169 87 1 3 171 19 186 1.32e-47 157
Msa1239320 MtrunA17_Chr8g0366231 49.704 169 83 2 1 168 1 168 5.29e-46 152
Msa1239320 MtrunA17_Chr5g0420091 47.159 176 83 4 1 171 1 171 1.39e-44 148
Msa1239320 MtrunA17_Chr7g0220111 46.893 177 81 4 1 171 1 170 9.05e-44 147
Msa1239320 MtrunA17_Chr4g0061691 46.471 170 89 2 1 169 1 169 1.25e-43 146
Msa1239320 MtrunA17_Chr6g0455511 46.023 176 84 4 1 171 1 170 1.58e-43 146
Msa1239320 MtrunA17_Chr2g0279821 45.455 176 84 3 1 171 1 169 1.67e-43 146
Msa1239320 MtrunA17_Chr3g0122251 45.506 178 94 2 1 175 1 178 5.04e-43 145
Msa1239320 MtrunA17_Chr4g0061671 45.087 173 89 3 1 171 1 169 7.73e-43 143
Msa1239320 MtrunA17_Chr5g0420081 40.455 220 107 4 1 213 1 203 2.99e-42 143
Msa1239320 MtrunA17_Chr4g0018421 43.275 171 96 1 1 170 1 171 1.68e-41 140
Msa1239320 MtrunA17_Chr1g0204111 38.813 219 132 2 1 219 17 233 9.28e-41 139
Msa1239320 MtrunA17_Chr7g0220121 43.860 171 88 3 1 168 1 166 3.07e-40 138
Msa1239320 MtrunA17_Chr5g0411691 38.537 205 122 2 1 205 1 201 1.38e-39 136
Msa1239320 MtrunA17_Chr4g0049541 39.070 215 118 3 1 207 1 210 7.81e-39 134
Msa1239320 MtrunA17_Chr4g0020221 40.928 237 112 6 1 213 1 233 1.22e-35 126
Msa1239320 MtrunA17_Chr6g0474371 42.529 174 95 4 1 171 1 172 3.72e-35 123
Msa1239320 MtrunA17_Chr4g0049901 39.352 216 122 4 1 213 27 236 3.89e-35 124
Msa1239320 MtrunA17_Chr1g0164791 40.556 180 89 4 1 169 1 173 9.21e-35 123
Msa1239320 MtrunA17_Chr5g0412461 36.681 229 124 6 1 213 1 224 1.54e-33 120
Msa1239320 MtrunA17_Chr5g0412271 36.522 230 124 7 1 213 1 225 3.57e-32 116
Msa1239320 MtrunA17_Chr3g0142191 41.250 160 84 3 1 157 1 153 4.38e-32 116
Msa1239320 MtrunA17_Chr3g0125241 36.022 186 104 5 1 178 26 204 2.60e-30 111
Msa1239320 MtrunA17_Chr5g0427401 32.468 231 129 5 1 213 1 222 2.30e-28 107
Msa1239320 MtrunA17_Chr7g0246381 75.410 61 15 0 1 61 1 61 2.58e-27 99.8
Msa1239320 MtrunA17_Chr8g0377561 75.862 58 14 0 1 58 1 58 1.61e-26 98.2
Msa1239320 MtrunA17_Chr1g0159661 35.119 168 95 5 1 165 1 157 2.07e-26 100
Msa1239320 MtrunA17_Chr5g0404951 37.143 175 96 5 1 168 1 168 2.87e-26 101
Msa1239320 MtrunA17_Chr3g0134451 36.402 239 104 9 1 205 1 225 4.82e-25 100
Msa1239320 MtrunA17_Chr2g0308251 65.217 69 24 0 1 69 1 69 6.44e-25 94.0
Msa1239320 MtrunA17_Chr5g0427921 68.333 60 19 0 1 60 1 60 7.11e-25 92.8
Msa1239320 MtrunA17_Chr1g0173161 69.355 62 19 0 1 62 1 62 1.63e-24 92.8
Msa1239320 MtrunA17_Chr5g0425191 66.102 59 20 0 1 59 1 59 4.69e-21 84.3
Msa1239320 MtrunA17_Chr4g0044071 62.712 59 22 0 1 59 1 59 1.03e-20 83.6
Msa1239320 MtrunA17_Chr8g0379021 35.000 160 87 4 3 157 13 160 7.88e-20 83.2
Msa1239320 MtrunA17_Chr4g0018951 39.568 139 69 5 14 146 24 153 1.33e-18 79.7
Msa1239320 MtrunA17_Chr3g0089141 30.603 232 113 10 3 211 10 216 1.38e-18 81.3
Msa1239320 MtrunA17_Chr1g0208561 30.396 227 120 9 3 211 10 216 2.38e-18 80.5
Msa1239320 MtrunA17_Chr1g0175601 40.385 104 60 1 1 102 1 104 2.40e-18 79.3
Msa1239320 MtrunA17_Chr2g0292791 53.731 67 31 0 3 69 10 76 2.78e-18 80.5
Msa1239320 MtrunA17_Chr1g0180591 40.816 98 53 1 1 98 1 93 3.53e-18 79.0
Msa1239320 MtrunA17_Chr1g0208581 50.746 67 33 0 3 69 10 76 4.03e-18 79.7
Msa1239320 MtrunA17_Chr1g0166611 72.917 48 13 0 13 60 17 64 1.28e-17 76.3
Msa1239320 MtrunA17_Chr2g0333981 39.286 112 65 1 1 112 11 119 2.95e-17 76.3
Msa1239320 MtrunA17_Chr8g0376821 44.828 87 43 1 1 87 1 82 3.11e-17 76.3
Msa1239320 MtrunA17_Chr1g0175611 41.667 96 54 1 1 94 1 96 4.80e-17 75.5
Msa1239320 MtrunA17_Chr3g0099411 50.746 67 33 0 3 69 10 76 5.08e-17 76.6
Msa1239320 MtrunA17_Chr1g0206721 50.746 67 33 0 3 69 10 76 7.70e-17 76.6
Msa1239320 MtrunA17_Chr8g0355091 52.239 67 32 0 3 69 10 76 7.86e-17 76.6
Msa1239320 MtrunA17_Chr1g0188671 29.717 212 109 8 3 211 48 222 8.55e-17 77.0
Msa1239320 MtrunA17_Chr1g0206701 50.746 67 33 0 3 69 10 76 1.16e-16 76.3
Msa1239320 MtrunA17_Chr1g0187361 50.746 67 33 0 3 69 10 76 1.43e-16 75.9
Msa1239320 MtrunA17_Chr3g0099421 52.239 67 32 0 3 69 35 101 1.76e-16 75.9
Msa1239320 MtrunA17_Chr1g0169761 49.275 69 35 0 1 69 1 69 2.21e-16 73.9
Msa1239320 MtrunA17_Chr5g0419601 50.746 67 33 0 3 69 10 76 2.44e-16 75.1
Msa1239320 MtrunA17_Chr2g0325971 49.254 67 34 0 3 69 10 76 2.76e-16 74.7
Msa1239320 MtrunA17_Chr5g0422421 50.746 67 33 0 3 69 10 76 3.45e-16 74.7
Msa1239320 MtrunA17_Chr8g0357771 34.615 104 66 1 1 102 1 104 3.99e-16 73.6
Msa1239320 MtrunA17_Chr1g0149391 49.254 67 34 0 3 69 10 76 4.68e-16 74.3
Msa1239320 MtrunA17_Chr1g0206991 47.761 67 35 0 3 69 10 76 5.00e-16 73.2
Msa1239320 MtrunA17_Chr2g0317481 49.254 67 34 0 3 69 10 76 5.18e-16 74.3
Msa1239320 MtrunA17_Chr2g0317451 49.254 67 34 0 3 69 10 76 5.18e-16 74.3
Msa1239320 MtrunA17_Chr4g0074101 42.529 87 45 1 1 87 1 82 9.69e-16 72.8
Msa1239320 MtrunA17_Chr4g0052081 44.928 69 38 0 1 69 1 69 5.63e-15 70.5
Msa1239320 MtrunA17_Chr5g0422941 47.761 67 35 0 3 69 10 76 6.60e-15 71.2
Msa1239320 MtrunA17_Chr2g0300421 46.269 67 36 0 3 69 10 76 1.26e-14 69.3
Msa1239320 MtrunA17_Chr3g0089151 45.714 70 36 1 2 69 7 76 1.59e-14 68.2
Msa1239320 MtrunA17_Chr8g0356071 36.082 97 60 2 1 95 1 97 1.80e-14 68.6
Msa1239320 MtrunA17_Chr5g0417661 52.830 53 25 0 1 53 56 108 1.96e-14 67.8
Msa1239320 MtrunA17_Chr4g0052061 28.767 146 93 3 1 141 1 140 2.02e-14 68.6
Msa1239320 MtrunA17_Chr2g0300441 46.154 65 35 0 5 69 12 76 7.77e-14 68.2
Msa1239320 MtrunA17_Chr3g0119901 44.776 67 37 0 3 69 10 76 1.17e-13 67.4
Msa1239320 MtrunA17_Chr1g0187351 44.928 69 38 0 11 79 1 69 1.41e-13 63.9
Msa1239320 MtrunA17_Chr1g0206691 49.153 59 30 0 11 69 1 59 3.63e-13 66.2
Msa1239320 MtrunA17_Chr4g0071601 30.519 154 88 3 15 157 25 170 3.72e-13 65.5
Msa1239320 MtrunA17_Chr4g0060841 43.662 71 38 1 1 69 1 71 5.83e-13 67.0
Msa1239320 MtrunA17_Chr3g0085241 43.284 67 38 0 3 69 42 108 6.64e-13 65.9
Msa1239320 MtrunA17_Chr3g0111841 49.153 59 30 0 8 66 2 60 2.79e-12 60.5
Msa1239320 MtrunA17_Chr2g0308271 28.814 118 82 2 54 171 27 142 6.11e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1239320 AT2G45660.1 65.581 215 66 3 1 213 1 209 2.18e-94 275
Msa1239320 AT2G45660.2 74.534 161 36 2 1 159 1 158 7.97e-82 241
Msa1239320 AT5G62165.3 55.399 213 88 3 1 213 1 206 1.55e-76 229
Msa1239320 AT5G62165.1 55.399 213 88 3 1 213 1 206 1.55e-76 229
Msa1239320 AT5G62165.2 55.399 213 88 3 1 213 1 206 1.55e-76 229
Msa1239320 AT4G22950.3 56.502 223 89 3 1 222 1 216 1.60e-76 230
Msa1239320 AT4G22950.1 56.502 223 89 3 1 222 1 216 1.60e-76 230
Msa1239320 AT4G22950.2 64.912 171 58 1 1 171 1 169 1.41e-73 221
Msa1239320 AT5G62165.17 63.057 157 57 1 1 157 1 156 5.62e-70 211
Msa1239320 AT5G62165.12 63.057 157 57 1 1 157 1 156 5.62e-70 211
Msa1239320 AT5G62165.11 63.057 157 57 1 1 157 1 156 5.62e-70 211
Msa1239320 AT4G11880.4 56.502 223 91 3 1 222 1 218 2.03e-69 212
Msa1239320 AT4G11880.1 56.502 223 91 3 1 222 1 218 2.03e-69 212
Msa1239320 AT4G11880.2 65.190 158 52 2 1 157 1 156 9.10e-67 204
Msa1239320 AT4G11880.3 65.190 158 52 2 1 157 1 156 9.10e-67 204
Msa1239320 AT5G62165.10 51.643 213 82 4 1 213 1 192 2.63e-66 203
Msa1239320 AT5G62165.4 51.643 213 82 4 1 213 1 192 2.63e-66 203
Msa1239320 AT5G62165.6 60.265 151 59 1 1 151 1 150 1.40e-64 197
Msa1239320 AT5G62165.9 60.265 151 59 1 1 151 1 150 1.40e-64 197
Msa1239320 AT5G62165.7 60.265 151 59 1 1 151 1 150 1.40e-64 197
Msa1239320 AT5G62165.8 60.265 151 59 1 1 151 1 150 1.40e-64 197
Msa1239320 AT5G62165.13 60.265 151 59 1 1 151 1 150 1.40e-64 197
Msa1239320 AT5G51870.1 47.685 216 103 1 1 216 1 206 1.16e-63 197
Msa1239320 AT5G51870.4 47.248 218 113 1 1 216 1 218 3.11e-60 189
Msa1239320 AT5G51870.3 47.248 218 113 1 1 216 11 228 4.14e-60 189
Msa1239320 AT5G51860.1 45.833 216 111 2 1 216 1 210 2.48e-57 181
Msa1239320 AT5G51860.2 45.370 216 103 2 1 216 1 201 3.50e-56 177
Msa1239320 AT5G51870.2 55.172 145 65 0 1 145 1 145 2.15e-50 162
Msa1239320 AT3G58780.1 47.953 171 88 1 1 171 16 185 8.16e-50 163
Msa1239320 AT3G58780.5 47.953 171 88 1 1 171 22 191 8.22e-50 163
Msa1239320 AT5G51870.5 55.172 145 65 0 1 145 24 168 1.19e-49 160
Msa1239320 AT4G09960.1 46.739 184 91 2 1 178 1 183 1.65e-49 161
Msa1239320 AT2G45650.1 51.163 172 82 1 1 172 1 170 1.90e-49 162
Msa1239320 AT4G09960.6 46.739 184 91 2 1 178 2 184 2.11e-49 161
Msa1239320 AT4G09960.5 49.123 171 86 1 1 171 11 180 3.22e-49 161
Msa1239320 AT4G18960.1 49.704 169 84 1 3 171 19 186 4.47e-49 161
Msa1239320 AT4G09960.3 46.739 184 91 2 1 178 27 209 7.14e-49 160
Msa1239320 AT2G42830.1 47.929 169 87 1 3 171 18 185 7.38e-49 160
Msa1239320 AT2G42830.2 47.853 163 84 1 3 165 18 179 1.48e-47 157
Msa1239320 AT4G09960.2 53.147 143 66 1 1 143 1 142 9.56e-47 154
Msa1239320 AT3G61120.1 50.311 161 77 1 1 161 1 158 2.36e-46 154
Msa1239320 AT2G03710.3 44.509 173 92 2 1 171 1 171 2.38e-46 152
Msa1239320 AT4G09960.4 51.316 152 73 1 1 152 96 246 3.82e-46 156
Msa1239320 AT2G03710.1 44.910 167 88 2 1 165 1 165 9.44e-46 153
Msa1239320 AT2G03710.2 44.910 167 88 2 1 165 1 165 9.69e-46 153
Msa1239320 AT3G58780.4 52.448 143 67 1 3 145 18 159 1.07e-45 153
Msa1239320 AT1G69120.2 48.256 172 87 2 1 171 1 171 5.47e-45 150
Msa1239320 AT1G26310.1 48.555 173 87 2 1 171 1 173 6.53e-45 150
Msa1239320 AT3G58780.2 45.614 171 85 2 1 171 16 178 1.04e-44 149
Msa1239320 AT1G69120.1 48.256 172 87 2 1 171 1 171 1.69e-44 149
Msa1239320 AT3G58780.3 42.268 194 86 2 3 171 18 210 3.29e-44 149
Msa1239320 AT1G24260.1 48.235 170 86 2 1 168 1 170 3.48e-44 149
Msa1239320 AT1G24260.2 49.133 173 81 4 1 168 1 171 5.57e-44 148
Msa1239320 AT3G02310.1 42.647 204 98 5 1 197 1 192 8.34e-44 147
Msa1239320 AT5G15800.1 46.629 178 81 4 1 171 1 171 2.05e-43 147
Msa1239320 AT3G02310.2 46.629 178 81 4 1 171 1 171 2.47e-43 145
Msa1239320 AT5G15800.2 46.629 178 81 4 1 171 1 171 4.04e-43 146
Msa1239320 AT5G60910.1 45.930 172 91 2 1 171 1 171 2.27e-42 144
Msa1239320 AT1G24260.3 50.000 162 74 4 1 157 1 160 4.96e-42 142
Msa1239320 AT3G57230.1 42.188 192 107 3 1 192 1 188 1.70e-41 141
Msa1239320 AT3G57230.4 42.188 192 107 3 1 192 1 188 1.70e-41 141
Msa1239320 AT3G30260.1 45.745 188 95 4 1 183 1 186 2.73e-40 139
Msa1239320 AT4G37940.1 43.353 173 92 3 1 171 1 169 4.94e-40 137
Msa1239320 AT3G57230.2 47.222 144 74 1 1 144 1 142 2.62e-39 132
Msa1239320 AT5G13790.2 44.643 168 88 1 1 168 1 163 3.36e-39 136
Msa1239320 AT5G62165.14 67.442 86 28 0 1 86 1 86 6.17e-38 128
Msa1239320 AT5G13790.1 44.048 168 86 1 1 168 1 160 8.97e-38 132
Msa1239320 AT4G24540.1 37.054 224 123 5 1 213 1 217 2.37e-37 130
Msa1239320 AT2G22630.1 43.353 173 92 3 1 171 1 169 5.49e-37 129
Msa1239320 AT2G22630.2 43.353 173 92 3 1 171 1 169 5.49e-37 129
Msa1239320 AT4G37940.4 42.197 173 94 3 1 171 1 169 5.55e-37 129
Msa1239320 AT4G37940.3 45.638 149 75 3 1 147 1 145 2.17e-36 126
Msa1239320 AT3G57390.1 36.145 249 127 7 1 224 1 242 6.49e-36 127
Msa1239320 AT3G57390.3 38.571 210 105 5 1 193 1 203 1.93e-35 125
Msa1239320 AT5G23260.2 43.713 167 88 4 1 165 1 163 2.83e-35 125
Msa1239320 AT5G23260.4 43.713 167 88 4 1 165 17 179 5.08e-35 125
Msa1239320 AT2G22540.3 38.350 206 111 3 1 195 1 201 7.15e-34 122
Msa1239320 AT2G22540.1 38.350 206 111 3 1 195 1 201 7.15e-34 122
Msa1239320 AT2G14210.1 44.379 169 91 3 1 168 1 167 4.80e-33 119
Msa1239320 AT2G14210.2 44.379 169 91 3 1 168 1 167 6.28e-33 119
Msa1239320 AT5G10140.4 42.500 160 78 3 1 157 1 149 6.33e-33 117
Msa1239320 AT5G65060.1 38.220 191 105 4 1 187 1 182 1.34e-32 117
Msa1239320 AT5G23260.1 43.713 167 83 5 1 165 17 174 2.62e-32 118
Msa1239320 AT5G23260.3 40.884 181 97 5 1 175 1 177 4.05e-32 117
Msa1239320 AT5G65060.3 39.412 170 93 3 1 169 1 161 1.85e-31 114
Msa1239320 AT1G71692.1 40.782 179 97 3 1 171 1 178 2.48e-31 114
Msa1239320 AT5G65070.1 39.320 206 106 5 1 200 1 193 5.22e-31 113
Msa1239320 AT5G10140.1 39.815 216 104 6 1 213 1 193 7.14e-31 112
Msa1239320 AT5G65070.2 37.168 226 114 5 1 200 1 224 8.11e-31 113
Msa1239320 AT5G10140.2 41.830 153 79 2 1 152 1 144 1.30e-30 111
Msa1239320 AT3G54340.1 40.491 163 87 3 1 160 1 156 2.28e-30 112
Msa1239320 AT5G10140.3 41.830 153 79 2 1 152 1 144 3.39e-30 110
Msa1239320 AT5G65050.3 39.080 174 96 3 1 173 1 165 3.71e-30 110
Msa1239320 AT5G65060.2 37.173 191 96 5 1 187 1 171 7.86e-30 109
Msa1239320 AT5G65050.2 39.645 169 92 3 1 168 1 160 8.45e-30 109
Msa1239320 AT1G77080.4 40.838 191 92 4 1 185 1 176 1.49e-29 109
Msa1239320 AT5G65070.3 36.123 227 116 5 1 200 1 225 1.31e-28 108
Msa1239320 AT1G77080.11 41.714 175 82 3 1 169 1 161 2.62e-28 105
Msa1239320 AT1G77080.5 41.530 183 83 4 1 173 1 169 2.94e-28 105
Msa1239320 AT2G22540.2 34.298 242 120 6 1 213 1 232 3.10e-28 107
Msa1239320 AT1G77080.2 41.622 185 95 3 1 185 1 172 3.27e-28 105
Msa1239320 AT5G65070.5 38.333 180 88 3 1 157 1 180 1.33e-27 104
Msa1239320 AT5G65050.1 39.744 156 84 3 1 155 1 147 1.50e-27 103
Msa1239320 AT5G65050.5 36.757 185 96 4 1 184 1 165 2.14e-27 103
Msa1239320 AT5G65080.2 38.000 200 114 4 1 200 8 197 1.58e-26 102
Msa1239320 AT5G20240.2 37.162 148 85 3 1 146 1 142 2.48e-26 99.8
Msa1239320 AT5G65080.3 38.608 158 87 3 1 157 8 156 3.80e-26 100
Msa1239320 AT5G20240.1 36.913 149 86 3 1 147 1 143 4.38e-26 100
Msa1239320 AT5G65070.4 41.333 150 74 3 1 147 1 139 4.80e-26 99.0
Msa1239320 AT1G31140.2 37.952 166 96 2 1 159 1 166 5.15e-26 100
Msa1239320 AT1G77080.8 39.706 204 103 5 1 185 1 203 6.45e-26 100
Msa1239320 AT1G31140.1 37.952 166 94 3 1 159 1 164 2.70e-25 99.0
Msa1239320 AT1G77080.12 42.138 159 80 2 1 159 1 147 6.23e-24 93.6
Msa1239320 AT1G77980.1 31.132 212 106 6 1 174 1 210 4.55e-21 90.1
Msa1239320 AT5G62165.15 45.192 104 51 2 110 213 56 153 1.09e-20 85.5
Msa1239320 AT5G62165.5 45.192 104 51 2 110 213 56 153 1.09e-20 85.5
Msa1239320 AT1G22130.1 58.333 72 29 1 1 71 1 72 1.80e-20 88.6
Msa1239320 AT5G60440.1 32.353 170 83 5 3 156 8 161 6.06e-19 83.6
Msa1239320 AT1G77950.3 47.727 88 42 2 1 84 1 88 2.15e-18 81.3
Msa1239320 AT1G77950.2 47.727 88 42 2 1 84 1 88 2.15e-18 81.3
Msa1239320 AT1G77950.1 47.727 88 42 2 1 84 1 88 2.15e-18 81.3
Msa1239320 AT1G77950.4 47.727 88 42 2 1 84 1 88 2.15e-18 81.3
Msa1239320 AT4G37435.1 54.545 66 30 0 1 66 1 66 1.10e-17 78.2
Msa1239320 AT4G36590.1 53.623 69 32 0 3 71 8 76 1.72e-17 79.0
Msa1239320 AT3G66656.1 46.479 71 38 0 1 71 1 71 1.24e-16 75.1
Msa1239320 AT1G18750.1 29.386 228 125 6 1 194 1 226 4.25e-16 76.6
Msa1239320 AT2G34440.1 44.928 69 38 0 1 69 1 69 4.54e-16 73.6
Msa1239320 AT1G18750.4 29.386 228 125 6 1 194 1 226 4.58e-16 76.6
Msa1239320 AT1G18750.3 49.296 71 34 1 1 69 1 71 1.13e-15 75.5
Msa1239320 AT2G03060.3 28.780 205 113 5 1 180 1 197 1.47e-15 75.1
Msa1239320 AT2G03060.7 28.780 205 113 5 1 180 1 197 1.47e-15 75.1
Msa1239320 AT2G03060.1 28.780 205 113 5 1 180 1 197 1.47e-15 75.1
Msa1239320 AT2G03060.2 28.780 205 113 5 1 180 1 197 1.71e-15 74.7
Msa1239320 AT2G24840.1 42.105 95 49 2 3 91 64 158 2.69e-15 73.2
Msa1239320 AT1G01530.1 46.970 66 35 0 3 68 8 73 3.37e-15 72.8
Msa1239320 AT1G69540.1 28.571 182 99 4 1 154 1 179 1.22e-14 72.0
Msa1239320 AT1G69540.2 28.571 182 99 4 1 154 1 179 1.83e-14 71.6
Msa1239320 AT3G04100.1 42.857 70 40 0 5 74 17 86 6.22e-14 68.6
Msa1239320 AT1G65360.1 41.176 68 40 0 3 70 8 75 7.57e-14 68.6
Msa1239320 AT1G72350.1 42.045 88 49 1 3 90 44 129 2.35e-13 67.4
Msa1239320 AT1G47760.1 36.190 105 56 2 1 101 1 98 3.17e-13 66.2
Msa1239320 AT1G28460.1 47.761 67 35 0 5 71 11 77 1.12e-12 64.7
Msa1239320 AT1G29962.1 46.269 67 36 0 5 71 11 77 3.24e-12 63.5
Msa1239320 AT4G18960.4 32.000 125 83 2 48 171 49 172 3.48e-12 63.2
Msa1239320 AT4G18960.3 32.000 125 83 2 48 171 49 172 4.55e-12 63.9
Msa1239320 AT4G18960.2 32.000 125 83 2 48 171 49 172 4.55e-12 63.9
Msa1239320 AT1G69120.3 36.792 106 66 1 66 171 5 109 4.87e-12 63.2
Msa1239320 AT1G77080.10 41.053 95 55 1 91 185 29 122 2.16e-11 60.1
Msa1239320 AT1G28450.1 43.284 67 38 0 5 71 11 77 9.38e-11 59.3
Msa1239320 AT5G62165.16 37.500 104 45 3 110 213 56 139 9.39e-11 58.5

Find 71 sgRNAs with CRISPR-Local

Find 640 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGCGTCTTGTTCTTGTTTC+TGG 0.122694 8_2:-20921254 None:intergenic
CAATCATTTATTTCTTAATA+TGG 0.167043 8_2:+20910840 Msa1239320:five_prime_UTR
CGGTATCGTTCAATCGTTTC+TGG 0.172599 8_2:-20917594 None:intergenic
CCTTGAACTTACCTCAATTA+TGG 0.183089 8_2:+20910978 Msa1239320:five_prime_UTR
CAATTATGGATCACTACTTT+TGG 0.236017 8_2:+20910992 Msa1239320:five_prime_UTR
CAAAGAAAATATATGTATAA+AGG 0.264770 8_2:-20911103 None:intergenic
GAAACAGATTTGCACCAAAT+TGG 0.280301 8_2:-20911132 None:intergenic
CATTCCCTCAGGAAACTCTT+AGG 0.282812 8_2:+20920033 Msa1239320:intron
AAACTCATAATTGCTTGTTT+TGG 0.291781 8_2:-20910798 None:intergenic
TCAAGGAAAAGGATTGGATT+TGG 0.305240 8_2:-20910961 None:intergenic
TGGGGTCAGGTTGATTAATA+AGG 0.339508 8_2:+20910885 Msa1239320:five_prime_UTR
GTGCCTAGAACAGGAAAATA+AGG 0.354778 8_2:-20911077 None:intergenic
GCATAGTCAGAGGGATTAAT+CGG 0.403673 8_2:-20921304 None:intergenic
AAAGAAAATATATGTATAAA+GGG 0.409393 8_2:-20911102 None:intergenic
CATTTATTTCTTAATATGGT+GGG 0.422909 8_2:+20910844 Msa1239320:five_prime_UTR
ACATTCTCAAAGAGAAGAAA+TGG 0.428741 8_2:+20911714 Msa1239320:CDS
TAAAGGGTTGTGCCTAGAAC+AGG 0.433795 8_2:-20911086 None:intergenic
TTGAGGTAAGTTCAAGGAAA+AGG 0.435373 8_2:-20910972 None:intergenic
AAACTCTTAGGAGAAGGTCT+AGG 0.447821 8_2:+20920045 Msa1239320:CDS
GTTGATTAATAAGGAAAGGT+AGG 0.449740 8_2:+20910894 Msa1239320:five_prime_UTR
GCAAGAAAAGCAATTTCAAA+AGG 0.455026 8_2:-20911154 None:intergenic
TCCTCAACTAGCTACACCTT+TGG 0.462501 8_2:-20921281 None:intergenic
GTAAGTTCAAGGAAAAGGAT+TGG 0.474181 8_2:-20910967 None:intergenic
TATACAATGCAAATGTAGTA+AGG 0.483810 8_2:+20921492 Msa1239320:three_prime_UTR
AAGCAAAATTCGAGCAAGAA+AGG 0.486364 8_2:+20920122 Msa1239320:CDS
AATTGAGCAGCTAAAGGAAA+AGG 0.487373 8_2:+20920242 Msa1239320:CDS
TCATTTATTTCTTAATATGG+TGG 0.491560 8_2:+20910843 Msa1239320:five_prime_UTR
GGGTAGCTGTAGAAGCAAGA+TGG 0.499150 8_2:+20910865 Msa1239320:five_prime_UTR
TCAGTCTCCACATCTGAACT+TGG 0.501611 8_2:-20921215 None:intergenic
GTGGAGACTGAATTGTTCAT+TGG 0.509005 8_2:+20921227 Msa1239320:CDS
TGTAGAAGCAAGATGGGGTC+AGG 0.510040 8_2:+20910872 Msa1239320:five_prime_UTR
TCAACTGATTCAGATGGTGT+TGG 0.512523 8_2:-20917642 None:intergenic
ATATGACCCGTGCGGTAGCA+CGG 0.520929 8_2:-20921472 None:intergenic
ACAGGAAAATAAGGAAGGGA+AGG 0.522973 8_2:-20911068 None:intergenic
GGTAGCTGTAGAAGCAAGAT+GGG 0.536589 8_2:+20910866 Msa1239320:five_prime_UTR
CCATAATTGAGGTAAGTTCA+AGG 0.537835 8_2:-20910978 None:intergenic
ATCATTCAGATAGATAATAG+TGG 0.540306 8_2:+20921403 Msa1239320:three_prime_UTR
AACTCTTAGGAGAAGGTCTA+GGG 0.544433 8_2:+20920046 Msa1239320:CDS
GGAACAAATTGAGCAGCTAA+AGG 0.548309 8_2:+20920236 Msa1239320:CDS
TGAATCAGTTGAAAATACTC+AGG 0.553467 8_2:+20917653 Msa1239320:CDS
TCCAAAGGTGTAGCTAGTTG+AGG 0.555857 8_2:+20921280 Msa1239320:exon
CTAGAACAGGAAAATAAGGA+AGG 0.556487 8_2:-20911073 None:intergenic
CACAGGAAGCAACAAATGAT+CGG 0.559990 8_2:+20921147 Msa1239320:CDS
TGTTGGAGTGCTATTAATCC+TGG 0.562354 8_2:-20917625 None:intergenic
GACCCGTGCGGTAGCACGGG+TGG 0.563565 8_2:-20921468 None:intergenic
CTCAGGAAACTCTTAGGAGA+AGG 0.565759 8_2:+20920039 Msa1239320:intron
TCAGGTTGATTAATAAGGAA+AGG 0.569044 8_2:+20910890 Msa1239320:five_prime_UTR
AATTCATATAGCCTCCCTCT+TGG 0.571136 8_2:-20911804 None:intergenic
TATGACCCGTGCGGTAGCAC+GGG 0.571184 8_2:-20921471 None:intergenic
ATTTATTTCTTAATATGGTG+GGG 0.573784 8_2:+20910845 Msa1239320:five_prime_UTR
ACACAACACTGATAATTCAA+AGG 0.574104 8_2:-20911751 None:intergenic
TTCCACCCGTGCTACCGCAC+GGG 0.574518 8_2:+20921466 Msa1239320:three_prime_UTR
ATTTACCTTCTCTGTGAGCA+TGG 0.576272 8_2:-20920820 None:intergenic
AACGATACCGCAATCATACC+AGG 0.576369 8_2:+20917607 Msa1239320:CDS
GGACTACTTTGATCTGCAGA+AGG 0.576693 8_2:-20921194 None:intergenic
TATATGAATTTGCTAGCTCT+AGG 0.581552 8_2:+20911817 Msa1239320:CDS
ATCAGTGTTGTGTGATGCTG+AGG 0.585355 8_2:+20911761 Msa1239320:CDS
CAGGAAAATAAGGAAGGGAA+GGG 0.585818 8_2:-20911067 None:intergenic
TTTCCACCCGTGCTACCGCA+CGG 0.587270 8_2:+20921465 Msa1239320:three_prime_UTR
ACCTTCTTGAGACTTCAAAA+CGG 0.589369 8_2:+20919910 Msa1239320:CDS
AAATGCCATGCTCACAGAGA+AGG 0.595558 8_2:+20920815 Msa1239320:CDS
TTATATATTACAGCAACTGA+AGG 0.599858 8_2:+20919857 Msa1239320:intron
AAGTAGTCCAAGTTCAGATG+TGG 0.602735 8_2:+20921208 Msa1239320:CDS
AACAAGACGCATTTCTCCAA+AGG 0.605530 8_2:+20921265 Msa1239320:CDS
GTATGGTAACTATTCATCAC+AGG 0.605994 8_2:+20921130 Msa1239320:intron
AAAGTAGTGATCCATAATTG+AGG 0.623208 8_2:-20910989 None:intergenic
TAGAACAGGAAAATAAGGAA+GGG 0.626087 8_2:-20911072 None:intergenic
GTATAGAGAACGCAACAAGT+AGG 0.642404 8_2:+20911685 Msa1239320:CDS
TATTAATCCTGGTATGATTG+CGG 0.644304 8_2:-20917614 None:intergenic
TGCATTGTATATGACCCGTG+CGG 0.755286 8_2:-20921480 None:intergenic
GTAGCTGTAGAAGCAAGATG+GGG 0.755472 8_2:+20910867 Msa1239320:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTATTATTAAATTTTTTTA+GGG - chr8_2:20915111-20915130 None:intergenic 0.0%
!! TAAAAAAATTTAATAATAAT+CGG + chr8_2:20915111-20915130 Msa1239320:intron 0.0%
!! AAAGAAAATATATGTATAAA+GGG - chr8_2:20911105-20911124 None:intergenic 10.0%
!!! TAATTTTCTTTTTTAAACTA+CGG + chr8_2:20912006-20912025 Msa1239320:intron 10.0%
!!! CATTTTTCATTTTTAAATTA+CGG - chr8_2:20912135-20912154 None:intergenic 10.0%
!! ATATAATCAATAAAAAAAGT+GGG + chr8_2:20912678-20912697 Msa1239320:intron 10.0%
!!! TGTTATATTTTTCTTTTAAA+GGG - chr8_2:20914626-20914645 None:intergenic 10.0%
!!! TGTTATATTTTTCTTTTAAA+GGG - chr8_2:20914626-20914645 None:intergenic 10.0%
!!! ATTATACATTTTTTTTTTGA+AGG - chr8_2:20914776-20914795 None:intergenic 10.0%
!! ATATATACTGTATATATAAT+CGG + chr8_2:20915053-20915072 Msa1239320:intron 10.0%
!!! TAGAACAAATAATTTTTTTA+GGG - chr8_2:20915079-20915098 None:intergenic 10.0%
!!! TTAGAACAAATAATTTTTTT+AGG - chr8_2:20915080-20915099 None:intergenic 10.0%
!!! TTTCTATTTTTTATTTCAAT+AGG + chr8_2:20915718-20915737 Msa1239320:intron 10.0%
!!! AAAGCATAAATATTTTTAAA+TGG - chr8_2:20915893-20915912 None:intergenic 10.0%
!! TCGAAAAATAAAATAAAATT+AGG + chr8_2:20917318-20917337 Msa1239320:intron 10.0%
!! CGAAAAATAAAATAAAATTA+GGG + chr8_2:20917319-20917338 Msa1239320:intron 10.0%
!! AAAAAAAAAAAGAAAAGAAA+TGG + chr8_2:20918219-20918238 Msa1239320:intron 10.0%
!!! TTTTTTTTTTGTAAAAAGAA+AGG + chr8_2:20919632-20919651 Msa1239320:intron 10.0%
!!! CGTAAAATTTAAAATTATAT+AGG - chr8_2:20920169-20920188 None:intergenic 10.0%
!!! CAATCATTTATTTCTTAATA+TGG + chr8_2:20910840-20910859 Msa1239320:five_prime_UTR 15.0%
!! TAAAAAATGAATAAGAGTTA+AGG - chr8_2:20911047-20911066 None:intergenic 15.0%
!! CAAAGAAAATATATGTATAA+AGG - chr8_2:20911106-20911125 None:intergenic 15.0%
!!! AAAAGCTCTTAAATTTTTAT+AGG + chr8_2:20911207-20911226 Msa1239320:intron 15.0%
!!! TATTTGATGACTAAATTAAA+TGG - chr8_2:20911268-20911287 None:intergenic 15.0%
!! ATGAGATCAATTAAAAATTA+AGG - chr8_2:20912454-20912473 None:intergenic 15.0%
!! CATATAATCAATAAAAAAAG+TGG + chr8_2:20912677-20912696 Msa1239320:intron 15.0%
!! TATTATGATTTCAATATCAT+GGG - chr8_2:20912806-20912825 None:intergenic 15.0%
!! TTATTATGATTTCAATATCA+TGG - chr8_2:20912807-20912826 None:intergenic 15.0%
!!! CTTTTTGTACTTTTTTTAAA+TGG - chr8_2:20912879-20912898 None:intergenic 15.0%
!!! ATGTTGTTATGTTTTTATTT+TGG - chr8_2:20912927-20912946 None:intergenic 15.0%
!! TTAAAATTATCTCTATTTCA+TGG - chr8_2:20912988-20913007 None:intergenic 15.0%
!! TTATGTAAAAAATATCCTTT+GGG - chr8_2:20913491-20913510 None:intergenic 15.0%
!! TTTATGTAAAAAATATCCTT+TGG - chr8_2:20913492-20913511 None:intergenic 15.0%
!!! TCAATCATTAATTTCATTTT+TGG + chr8_2:20913784-20913803 Msa1239320:intron 15.0%
!!! CAATCATTAATTTCATTTTT+GGG + chr8_2:20913785-20913804 Msa1239320:intron 15.0%
!! ATAATGAGAATTATGATTAA+TGG + chr8_2:20914129-20914148 Msa1239320:intron 15.0%
!!! GTGTTATATTTTTCTTTTAA+AGG - chr8_2:20914627-20914646 None:intergenic 15.0%
!!! GTGTTATATTTTTCTTTTAA+AGG - chr8_2:20914627-20914646 None:intergenic 15.0%
!!! AAATTCAAAGATATATCTTT+TGG + chr8_2:20914797-20914816 Msa1239320:intron 15.0%
!!! TTATTTCAATAGGTTTTAAT+TGG + chr8_2:20915728-20915747 Msa1239320:intron 15.0%
!!! TATATAGCTTTGTTTTAAAA+AGG - chr8_2:20916735-20916754 None:intergenic 15.0%
!! AAAGTTATTGTTAGAAAATT+AGG - chr8_2:20917135-20917154 None:intergenic 15.0%
!! AATACTATCTACTATAATTA+GGG - chr8_2:20917241-20917260 None:intergenic 15.0%
!! TAATACTATCTACTATAATT+AGG - chr8_2:20917242-20917261 None:intergenic 15.0%
!! AAGTATTACGAAAATATATA+AGG - chr8_2:20917527-20917546 None:intergenic 15.0%
!!! TTATATATTTTCGTAATACT+TGG + chr8_2:20917526-20917545 Msa1239320:intron 15.0%
!!! AAAAAGTACTATTTAATTTC+TGG - chr8_2:20917750-20917769 None:intergenic 15.0%
!!! TTCAAAATATTTGATGTTTT+AGG + chr8_2:20917965-20917984 Msa1239320:intron 15.0%
!! TATTGAAACTTCTAATTAAA+TGG - chr8_2:20918037-20918056 None:intergenic 15.0%
!! TAGACAAAAAACATAAATAA+GGG + chr8_2:20918118-20918137 Msa1239320:intron 15.0%
!! ATATTTATGTGTCTATTTAT+AGG - chr8_2:20918307-20918326 None:intergenic 15.0%
!! ATGTTACAAATATATTGTAT+AGG - chr8_2:20918606-20918625 None:intergenic 15.0%
!!! ATAATTTTTCTCACAAAATT+GGG - chr8_2:20919406-20919425 None:intergenic 15.0%
!!! AATAATTTTTCTCACAAAAT+TGG - chr8_2:20919407-20919426 None:intergenic 15.0%
!! AAGTTGTTTATATATTTAAC+AGG + chr8_2:20920266-20920285 Msa1239320:intron 15.0%
!!! AAAAATGTTTGTTATCAATT+AGG + chr8_2:20920321-20920340 Msa1239320:intron 15.0%
!!! ACTAATCAAATTTTGAATAA+AGG - chr8_2:20920507-20920526 None:intergenic 15.0%
!! GGAAATTTATTAATGTAAAA+AGG + chr8_2:20920943-20920962 Msa1239320:intron 15.0%
!!! TCATTTATTTCTTAATATGG+TGG + chr8_2:20910843-20910862 Msa1239320:five_prime_UTR 20.0%
!!! CATTTATTTCTTAATATGGT+GGG + chr8_2:20910844-20910863 Msa1239320:five_prime_UTR 20.0%
!!! ATTTATTTCTTAATATGGTG+GGG + chr8_2:20910845-20910864 Msa1239320:five_prime_UTR 20.0%
!!! CTTTTCTGATTAATTGATAT+AGG - chr8_2:20911192-20911211 None:intergenic 20.0%
!!! TTTTTGTTACGAATTGAAAT+AGG + chr8_2:20911529-20911548 Msa1239320:intron 20.0%
!! AAACAAGAACAACATAAATT+AGG - chr8_2:20911608-20911627 None:intergenic 20.0%
!! AGCAAAGAAAAGAAAAAAAA+TGG + chr8_2:20911638-20911657 Msa1239320:intron 20.0%
!! ACATAGTAGATATAATGAAA+AGG + chr8_2:20912529-20912548 Msa1239320:intron 20.0%
!!! TTATGTTTTTATTTTGGTCT+TGG - chr8_2:20912921-20912940 None:intergenic 20.0%
!! AAATATTCACAAGATATTGT+AGG - chr8_2:20913241-20913260 None:intergenic 20.0%
!! ATACCGTAAATATTTATACT+TGG + chr8_2:20913266-20913285 Msa1239320:intron 20.0%
!! TACCGTAAATATTTATACTT+GGG + chr8_2:20913267-20913286 Msa1239320:intron 20.0%
!! AACCCAAGTATAAATATTTA+CGG - chr8_2:20913272-20913291 None:intergenic 20.0%
!! AAATATTTATACTTGGGTTT+AGG + chr8_2:20913273-20913292 Msa1239320:intron 20.0%
!! ATCATAAATGTTATAGGAAA+AGG - chr8_2:20913348-20913367 None:intergenic 20.0%
!! ACACTATTAATTATTTAACG+TGG - chr8_2:20913418-20913437 None:intergenic 20.0%
!! ACAAAATATTAATTCGAGAT+GGG + chr8_2:20914338-20914357 Msa1239320:intron 20.0%
!! TTAACATTATCGAATTAGTT+TGG - chr8_2:20914854-20914873 None:intergenic 20.0%
!! ATTACATGTAAGAATTCATA+CGG + chr8_2:20915028-20915047 Msa1239320:intron 20.0%
!!! AATTTATTTTGCACAATCAA+TGG - chr8_2:20915141-20915160 None:intergenic 20.0%
!! GAACTAAAAAACATCATAAA+AGG - chr8_2:20915373-20915392 None:intergenic 20.0%
!!! AAATTTTTAAGACTGAATTC+TGG - chr8_2:20915855-20915874 None:intergenic 20.0%
!! TCTAATATAGAAGACATAAA+TGG + chr8_2:20916007-20916026 Msa1239320:intron 20.0%
!! GGTAAAAAATTATTTACAAC+TGG - chr8_2:20916714-20916733 None:intergenic 20.0%
!! ATTCCTCAATTAAAAAAATC+TGG + chr8_2:20917055-20917074 Msa1239320:intron 20.0%
!!! AAATTTCTGGAAGAAAAATA+AGG - chr8_2:20917100-20917119 None:intergenic 20.0%
!! AGAGATTATATTATAGAGTA+AGG - chr8_2:20917299-20917318 None:intergenic 20.0%
!! AGTCAAAATGAAATATCAAT+AGG - chr8_2:20917413-20917432 None:intergenic 20.0%
!! ACATGTGAAAAAATGAAAAT+TGG - chr8_2:20917460-20917479 None:intergenic 20.0%
!! TGAATTAATAATAGTCACAT+TGG + chr8_2:20917553-20917572 Msa1239320:intron 20.0%
!! GTAGACAAAAAACATAAATA+AGG + chr8_2:20918117-20918136 Msa1239320:intron 20.0%
!! TAAGTATAGAAATAGTTGTA+AGG - chr8_2:20918158-20918177 None:intergenic 20.0%
!! AAAAAAAAGAAAAGAAATGG+AGG + chr8_2:20918222-20918241 Msa1239320:intron 20.0%
!! AAAAAAAGAAAAGAAATGGA+GGG + chr8_2:20918223-20918242 Msa1239320:intron 20.0%
!! AGTAGATTATTTAGTAATGA+GGG - chr8_2:20918576-20918595 None:intergenic 20.0%
!! TAGTAGATTATTTAGTAATG+AGG - chr8_2:20918577-20918596 None:intergenic 20.0%
!!! ACTATTTTATGTCATTATGA+GGG - chr8_2:20919501-20919520 None:intergenic 20.0%
!!! AACTATTTTATGTCATTATG+AGG - chr8_2:20919502-20919521 None:intergenic 20.0%
!! TTCAAAGATTTCTATGAAAA+TGG + chr8_2:20919597-20919616 Msa1239320:intron 20.0%
!! TAATCTGTTCATTATAAGTA+AGG - chr8_2:20919996-20920015 None:intergenic 20.0%
!! TGTTTATATATTTAACAGGA+TGG + chr8_2:20920270-20920289 Msa1239320:intron 20.0%
!!! TCAATTTGTTATAAGATTTG+TGG + chr8_2:20920584-20920603 Msa1239320:intron 20.0%
!!! TGAAGCTTTTTTTATTTTCT+TGG - chr8_2:20920697-20920716 None:intergenic 20.0%
!! TTTCAAGATTTCTATTAATC+TGG - chr8_2:20920896-20920915 None:intergenic 20.0%
!! AGACGATAAAAAAATGAAAA+AGG - chr8_2:20921001-20921020 None:intergenic 20.0%
!! ACTATGCAAAAGAAAAATAA+GGG + chr8_2:20921320-20921339 Msa1239320:three_prime_UTR 20.0%
!! AAACTCATAATTGCTTGTTT+TGG - chr8_2:20910801-20910820 None:intergenic 25.0%
!!! AATTATGGATCACTACTTTT+GGG + chr8_2:20910993-20911012 Msa1239320:five_prime_UTR 25.0%
!!! TTTCTTTGATTTTGCCAATT+TGG + chr8_2:20911118-20911137 Msa1239320:five_prime_UTR 25.0%
! AAATAGCTTCCTAGAAAAAA+GGG - chr8_2:20911241-20911260 None:intergenic 25.0%
! AAAATAGCTTCCTAGAAAAA+AGG - chr8_2:20911242-20911261 None:intergenic 25.0%
! AGGAACAAAAATTCTTAGAA+GGG - chr8_2:20911355-20911374 None:intergenic 25.0%
! AAGGAACAAAAATTCTTAGA+AGG - chr8_2:20911356-20911375 None:intergenic 25.0%
!! TCTAAGAATTTTTGTTCCTT+TGG + chr8_2:20911356-20911375 Msa1239320:intron 25.0%
!!! TTTTGTTCCTTTGGTTTTAT+TGG + chr8_2:20911365-20911384 Msa1239320:intron 25.0%
!!! TTTGTTCCTTTGGTTTTATT+GGG + chr8_2:20911366-20911385 Msa1239320:intron 25.0%
! TCTAGAAAGTTATGGAAAAA+TGG - chr8_2:20911436-20911455 None:intergenic 25.0%
!!! CTTTAAGATCTAGAAAGTTA+TGG - chr8_2:20911444-20911463 None:intergenic 25.0%
! CATAACTTTCTAGATCTTAA+AGG + chr8_2:20911442-20911461 Msa1239320:intron 25.0%
! TTTAAACCTTGTAAGGAAAA+GGG - chr8_2:20911481-20911500 None:intergenic 25.0%
! ATTTAAACCTTGTAAGGAAA+AGG - chr8_2:20911482-20911501 None:intergenic 25.0%
! AACACAATTTAAACCTTGTA+AGG - chr8_2:20911488-20911507 None:intergenic 25.0%
!! TAAATTGTGTTTTTCCTTCT+TGG + chr8_2:20911497-20911516 Msa1239320:intron 25.0%
! AAAAGAAAAAAAATGGTGAG+AGG + chr8_2:20911645-20911664 Msa1239320:exon 25.0%
! TGGTAATAATTTATTCATCG+AGG + chr8_2:20911927-20911946 Msa1239320:intron 25.0%
! GGTAATAATTTATTCATCGA+GGG + chr8_2:20911928-20911947 Msa1239320:intron 25.0%
! TATCTACTATGTTTCATAAG+AGG - chr8_2:20912521-20912540 None:intergenic 25.0%
! ATCTACATTAACTTTACATG+CGG - chr8_2:20912614-20912633 None:intergenic 25.0%
!!! TAGTGTTTATGTTAGTTTTG+AGG + chr8_2:20912729-20912748 Msa1239320:intron 25.0%
!!! AGTGTTTATGTTAGTTTTGA+GGG + chr8_2:20912730-20912749 Msa1239320:intron 25.0%
!! TTTTGTTGAGTTTATGTGTT+AGG - chr8_2:20912856-20912875 None:intergenic 25.0%
!!! GGGTTTAGGTTTTTTTTTTA+AGG + chr8_2:20913287-20913306 Msa1239320:intron 25.0%
! TTTAATCGAATCATTAGGTT+AGG + chr8_2:20913819-20913838 Msa1239320:intron 25.0%
! TGAGAAATATGAGAAATTGT+TGG - chr8_2:20913989-20914008 None:intergenic 25.0%
!! AAAGCATCATCTTAAAACAT+GGG - chr8_2:20914076-20914095 None:intergenic 25.0%
!! AAGTTTTCTTTTCTGATGAA+AGG + chr8_2:20914152-20914171 Msa1239320:intron 25.0%
! TATAATCTTGTCTACTATGT+GGG + chr8_2:20914195-20914214 Msa1239320:intron 25.0%
! CACAAAATATTAATTCGAGA+TGG + chr8_2:20914337-20914356 Msa1239320:intron 25.0%
! GTATAATTGAGTTCATTCTT+TGG - chr8_2:20914966-20914985 None:intergenic 25.0%
! ATATTCCAAAGATCAACTAA+TGG - chr8_2:20915006-20915025 None:intergenic 25.0%
! ACTAAAGTTAGAACACATAA+TGG - chr8_2:20915179-20915198 None:intergenic 25.0%
!!! TCAACATATCAATTTGTTGT+AGG + chr8_2:20915217-20915236 Msa1239320:intron 25.0%
! ATAAAAGGTTACCTCTTATT+TGG - chr8_2:20915358-20915377 None:intergenic 25.0%
!! TTTGTAGATGTAGTTTTTGT+CGG - chr8_2:20915491-20915510 None:intergenic 25.0%
! AACTACATCTACAAAACTAA+TGG + chr8_2:20915496-20915515 Msa1239320:intron 25.0%
!!! TTATGTTTTCGAGAATAGAA+AGG + chr8_2:20915585-20915604 Msa1239320:intron 25.0%
! TTCTCGTGATAATTAATTCT+TGG - chr8_2:20915614-20915633 None:intergenic 25.0%
!!! TTGACATTTTAAGAGGAATT+TGG - chr8_2:20915667-20915686 None:intergenic 25.0%
! TAATGACTAATGTCATTGTT+TGG - chr8_2:20915943-20915962 None:intergenic 25.0%
!!! AGTTTTATTCCCTTGTTTAT+GGG - chr8_2:20915987-20916006 None:intergenic 25.0%
!!! AAGTTTTATTCCCTTGTTTA+TGG - chr8_2:20915988-20916007 None:intergenic 25.0%
!! TTTTCTTTCGGGATTTTATT+TGG - chr8_2:20916062-20916081 None:intergenic 25.0%
!! TGACATTGCAATTTTTCTTT+CGG - chr8_2:20916074-20916093 None:intergenic 25.0%
!! TTTTCTTTCGGGATTTTATT+TGG - chr8_2:20916062-20916081 None:intergenic 25.0%
!! TGACATTGCAATTTTTCTTT+CGG - chr8_2:20916074-20916093 None:intergenic 25.0%
!! TTGCAATGTCAAAAAGTTTT+AGG + chr8_2:20916136-20916155 Msa1239320:intron 25.0%
!! TGCAATGTCAAAAAGTTTTA+GGG + chr8_2:20916137-20916156 Msa1239320:intron 25.0%
!!! ATGTCTTTTTAGTGTAGATA+TGG - chr8_2:20916222-20916241 None:intergenic 25.0%
! TTACTTTGATCCATTACATA+TGG + chr8_2:20916363-20916382 Msa1239320:intron 25.0%
! ATACTTCTTGTTGGAAATTA+CGG + chr8_2:20916425-20916444 Msa1239320:intron 25.0%
! ATCTTAAATTCAATGTCCTA+AGG - chr8_2:20916521-20916540 None:intergenic 25.0%
!! TTTTTGTCTTAATCACTATG+AGG - chr8_2:20916759-20916778 None:intergenic 25.0%
!! TTTTCTGTGTCTTATCTATT+GGG - chr8_2:20917026-20917045 None:intergenic 25.0%
!! TTTTTCTGTGTCTTATCTAT+TGG - chr8_2:20917027-20917046 None:intergenic 25.0%
!!! AGTCCAGATTTTTTTAATTG+AGG - chr8_2:20917061-20917080 None:intergenic 25.0%
!!! GTTTTTCAATTTGCATCTAA+AGG - chr8_2:20917271-20917290 None:intergenic 25.0%
! AAAAATGAGAAAACACACAA+GGG - chr8_2:20917484-20917503 None:intergenic 25.0%
! AAAAAATGAGAAAACACACA+AGG - chr8_2:20917485-20917504 None:intergenic 25.0%
!!! AACAGCAATTTTTTTTTGAG+AGG - chr8_2:20917714-20917733 None:intergenic 25.0%
!! TTAATTTCTGGATGATGAAT+AGG - chr8_2:20917738-20917757 None:intergenic 25.0%
! AGATTGTTCTATTATTGTCT+AGG + chr8_2:20917824-20917843 Msa1239320:intron 25.0%
! GAACATCATAAGAAAAGAAA+TGG - chr8_2:20917928-20917947 None:intergenic 25.0%
!! TTCTTTTCTTATGATGTTCT+AGG + chr8_2:20917929-20917948 Msa1239320:intron 25.0%
!!! TTTTTCAACAAGGGTAAAAT+TGG - chr8_2:20918010-20918029 None:intergenic 25.0%
! AATAGAAGTTTCAATTTGTG+TGG + chr8_2:20918065-20918084 Msa1239320:intron 25.0%
! TTAATATTTACTCATTCGTC+CGG + chr8_2:20918401-20918420 Msa1239320:intron 25.0%
!!! CAAGTCTTTTGCATTTTTTT+TGG - chr8_2:20919294-20919313 None:intergenic 25.0%
! AAAAAAATGCAAAAGACTTG+TGG + chr8_2:20919294-20919313 Msa1239320:intron 25.0%
! AAAGATTTCTATGAAAATGG+TGG + chr8_2:20919600-20919619 Msa1239320:intron 25.0%
!! CTTTTATGCAAATCTTACTT+TGG - chr8_2:20919685-20919704 None:intergenic 25.0%
!!! ATTTCAGGCATTGATTATTA+GGG - chr8_2:20919722-20919741 None:intergenic 25.0%
!!! TATTTCAGGCATTGATTATT+AGG - chr8_2:20919723-20919742 None:intergenic 25.0%
! AGGAAATGTTTCAAATATGA+GGG - chr8_2:20919750-20919769 None:intergenic 25.0%
! TTATATATTACAGCAACTGA+AGG + chr8_2:20919857-20919876 Msa1239320:intron 25.0%
! TCAATTAGGATCACTTTATT+AGG + chr8_2:20920335-20920354 Msa1239320:intron 25.0%
! CAATTAGGATCACTTTATTA+GGG + chr8_2:20920336-20920355 Msa1239320:intron 25.0%
! TTTGAATTATATGTACCAAG+TGG - chr8_2:20920537-20920556 None:intergenic 25.0%
!!! ATTGTGATGCAATTGATTTT+GGG - chr8_2:20920561-20920580 None:intergenic 25.0%
!!! AATTGTGATGCAATTGATTT+TGG - chr8_2:20920562-20920581 None:intergenic 25.0%
! TTTGAATGAGCAAATTTAGT+GGG - chr8_2:20920869-20920888 None:intergenic 25.0%
! CAAATCTTTCAACTATAGAA+TGG + chr8_2:20921088-20921107 Msa1239320:intron 25.0%
! GACTATGCAAAAGAAAAATA+AGG + chr8_2:20921319-20921338 Msa1239320:three_prime_UTR 25.0%
! ATCATTCAGATAGATAATAG+TGG + chr8_2:20921403-20921422 Msa1239320:three_prime_UTR 25.0%
! TATACAATGCAAATGTAGTA+AGG + chr8_2:20921492-20921511 Msa1239320:three_prime_UTR 25.0%
!! TCAGGTTGATTAATAAGGAA+AGG + chr8_2:20910890-20910909 Msa1239320:five_prime_UTR 30.0%
GTTGATTAATAAGGAAAGGT+AGG + chr8_2:20910894-20910913 Msa1239320:five_prime_UTR 30.0%
AAAGTAGTGATCCATAATTG+AGG - chr8_2:20910992-20911011 None:intergenic 30.0%
! CAATTATGGATCACTACTTT+TGG + chr8_2:20910992-20911011 Msa1239320:five_prime_UTR 30.0%
!! ATTATGGATCACTACTTTTG+GGG + chr8_2:20910994-20911013 Msa1239320:five_prime_UTR 30.0%
TAGAACAGGAAAATAAGGAA+GGG - chr8_2:20911075-20911094 None:intergenic 30.0%
GCAAGAAAAGCAATTTCAAA+AGG - chr8_2:20911157-20911176 None:intergenic 30.0%
!! TTTGAAATTGCTTTTCTTGC+TGG + chr8_2:20911157-20911176 Msa1239320:five_prime_UTR 30.0%
GATGAAAGAAACAAGGAAAT+GGG - chr8_2:20911316-20911335 None:intergenic 30.0%
TATGAAGGATGAAAGAAACA+AGG - chr8_2:20911323-20911342 None:intergenic 30.0%
ACATTCTCAAAGAGAAGAAA+TGG + chr8_2:20911714-20911733 Msa1239320:CDS 30.0%
ACACAACACTGATAATTCAA+AGG - chr8_2:20911754-20911773 None:intergenic 30.0%
! TTATTGTTTTCTCACCAAGA+GGG + chr8_2:20911790-20911809 Msa1239320:CDS 30.0%
!! TATATGAATTTGCTAGCTCT+AGG + chr8_2:20911817-20911836 Msa1239320:CDS 30.0%
! TTCTGAAAATTACTTGCATC+TGG + chr8_2:20911907-20911926 Msa1239320:intron 30.0%
CTAGAGTAAACAAACTCTAA+GGG - chr8_2:20912202-20912221 None:intergenic 30.0%
! TCTAGAGTAAACAAACTCTA+AGG - chr8_2:20912203-20912222 None:intergenic 30.0%
AGAAGTGAGAGAATGAAAAT+AGG + chr8_2:20912253-20912272 Msa1239320:intron 30.0%
AAAATAAGTCTCACATAACG+TGG - chr8_2:20912641-20912660 None:intergenic 30.0%
ATGATTTCAATATCATGGGT+TGG - chr8_2:20912802-20912821 None:intergenic 30.0%
AGTTCAACTTAATGTTATGG+TGG - chr8_2:20913042-20913061 None:intergenic 30.0%
GCTAGTTCAACTTAATGTTA+TGG - chr8_2:20913045-20913064 None:intergenic 30.0%
CATACACAGTTAATTAAGTG+AGG + chr8_2:20913141-20913160 Msa1239320:intron 30.0%
TATTCACAAGATATTGTAGG+AGG - chr8_2:20913238-20913257 None:intergenic 30.0%
TCCTATAACATTTATGATGC+AGG + chr8_2:20913350-20913369 Msa1239320:intron 30.0%
CCTATAACATTTATGATGCA+GGG + chr8_2:20913351-20913370 Msa1239320:intron 30.0%
GATGCAGGGTTTAAAAAAAA+TGG + chr8_2:20913365-20913384 Msa1239320:intron 30.0%
!! TTTTTAGCATGACATGATCA+AGG + chr8_2:20913449-20913468 Msa1239320:intron 30.0%
TTGCATCAAAATTGCAATAG+AGG + chr8_2:20913526-20913545 Msa1239320:intron 30.0%
!!! ATTTCATTTTTGGGACTTGT+TGG + chr8_2:20913794-20913813 Msa1239320:intron 30.0%
TGGTGTTTAATCGAATCATT+AGG + chr8_2:20913814-20913833 Msa1239320:intron 30.0%
ATGAGATATGATATGAGAAG+GGG - chr8_2:20913928-20913947 None:intergenic 30.0%
CATGAGATATGATATGAGAA+GGG - chr8_2:20913929-20913948 None:intergenic 30.0%
ACATGAGATATGATATGAGA+AGG - chr8_2:20913930-20913949 None:intergenic 30.0%
!!! GGACTGTTTTTCTTTGTTTT+TGG - chr8_2:20913968-20913987 None:intergenic 30.0%
AAGCATCATCTTAAAACATG+GGG - chr8_2:20914075-20914094 None:intergenic 30.0%
! CAAAGCATCATCTTAAAACA+TGG - chr8_2:20914077-20914096 None:intergenic 30.0%
GTATAATCTTGTCTACTATG+TGG + chr8_2:20914194-20914213 Msa1239320:intron 30.0%
CTTAGGAAATTGTCAAAATC+AGG - chr8_2:20914308-20914327 None:intergenic 30.0%
!! CTGATTTTGACAATTTCCTA+AGG + chr8_2:20914306-20914325 Msa1239320:intron 30.0%
TATTAATTCGAGATGGGAAA+AGG + chr8_2:20914344-20914363 Msa1239320:intron 30.0%
AGCTAAATATGAAAGCTTGT+AGG + chr8_2:20914384-20914403 Msa1239320:intron 30.0%
GTAGGACTACATAGTATAAT+TGG + chr8_2:20914402-20914421 Msa1239320:intron 30.0%
TGATCAAACTTAGATACTTG+TGG + chr8_2:20914437-20914456 Msa1239320:intron 30.0%
GATCAAACTTAGATACTTGT+GGG + chr8_2:20914438-20914457 Msa1239320:intron 30.0%
!!! TGGGGTTTTTTAGTTTTTTG+TGG - chr8_2:20914911-20914930 None:intergenic 30.0%
!! CAAAGATCAACTAATGGATT+AGG - chr8_2:20915000-20915019 None:intergenic 30.0%
CTAATCCATTAGTTGATCTT+TGG + chr8_2:20914998-20915017 Msa1239320:intron 30.0%
! TATTTTGCACAATCAATGGA+TGG - chr8_2:20915137-20915156 None:intergenic 30.0%
CTTTCACAAGTTACGAATAT+AGG + chr8_2:20915266-20915285 Msa1239320:intron 30.0%
!!! ATGTTTTTTAGTTCGAGAGA+AGG + chr8_2:20915379-20915398 Msa1239320:intron 30.0%
!!! ATTTTCAAGTGGATTAGGAA+GGG - chr8_2:20915452-20915471 None:intergenic 30.0%
!!! ATTCGATTTTCAAGTGGATT+AGG - chr8_2:20915457-20915476 None:intergenic 30.0%
!! TTTGGTATTCGATTTTCAAG+TGG - chr8_2:20915463-20915482 None:intergenic 30.0%
TCTCGAAAACATAACTAGAA+GGG - chr8_2:20915579-20915598 None:intergenic 30.0%
TTCTCGAAAACATAACTAGA+AGG - chr8_2:20915580-20915599 None:intergenic 30.0%
! GAGAATATTTAGACCTTTTG+TGG + chr8_2:20915629-20915648 Msa1239320:intron 30.0%
! GACTAATTTTGTACCACAAA+AGG - chr8_2:20915645-20915664 None:intergenic 30.0%
!! AGACTAGTTGACATTTTAAG+AGG - chr8_2:20915674-20915693 None:intergenic 30.0%
!!! TTTTAAGACTGAATTCTGGT+TGG - chr8_2:20915851-20915870 None:intergenic 30.0%
TGTCATTGTTTGGTCTATTT+GGG - chr8_2:20915933-20915952 None:intergenic 30.0%
ATGTCATTGTTTGGTCTATT+TGG - chr8_2:20915934-20915953 None:intergenic 30.0%
!! TTTGGTTTGTTGCATTTGTT+GGG - chr8_2:20916044-20916063 None:intergenic 30.0%
!! ATTTGGTTTGTTGCATTTGT+TGG - chr8_2:20916045-20916064 None:intergenic 30.0%
! GACATTGCAATTTTTCTTTC+GGG - chr8_2:20916073-20916092 None:intergenic 30.0%
! GACATTGCAATTTTTCTTTC+GGG - chr8_2:20916073-20916092 None:intergenic 30.0%
!!! CAAAAAGTTTTAGGGTTGTT+TGG + chr8_2:20916145-20916164 Msa1239320:intron 30.0%
AGACTAAACGATCAAGATAA+TGG + chr8_2:20916186-20916205 Msa1239320:intron 30.0%
!! AGTCTAGTTTGACTTGATAA+AGG - chr8_2:20916402-20916421 None:intergenic 30.0%
TAGACTCTAATACTTCTTGT+TGG + chr8_2:20916416-20916435 Msa1239320:intron 30.0%
! AATTCAATGTCCTAAGGTTT+TGG - chr8_2:20916515-20916534 None:intergenic 30.0%
TTATTTACAACTGGACTTGA+AGG - chr8_2:20916705-20916724 None:intergenic 30.0%
GGTGTAGAAAGAAAATAGTT+TGG - chr8_2:20916804-20916823 None:intergenic 30.0%
CAAATATTCATATGCAGTTG+AGG + chr8_2:20916899-20916918 Msa1239320:intron 30.0%
!!! TTTTGGAAGGGTGTTTAAAT+TGG - chr8_2:20916950-20916969 None:intergenic 30.0%
GTTAGAAAATTAGGAGTCTT+TGG - chr8_2:20917126-20917145 None:intergenic 30.0%
TATTAATCCTGGTATGATTG+CGG - chr8_2:20917617-20917636 None:intergenic 30.0%
!! GTATTTTCAACTGATTCAGA+TGG - chr8_2:20917651-20917670 None:intergenic 30.0%
TGAATCAGTTGAAAATACTC+AGG + chr8_2:20917653-20917672 Msa1239320:CDS 30.0%
!!! AGCAATTTTTTTTTGAGAGG+AGG - chr8_2:20917711-20917730 None:intergenic 30.0%
CATCATAAGAAAAGAAATGG+AGG - chr8_2:20917925-20917944 None:intergenic 30.0%
!! AATGGTGTGTTTTTCAACAA+GGG - chr8_2:20918019-20918038 None:intergenic 30.0%
!! AAATGGTGTGTTTTTCAACA+AGG - chr8_2:20918020-20918039 None:intergenic 30.0%
!! GTGTTGATAATTAAGGAGAT+TGG + chr8_2:20918091-20918110 Msa1239320:intron 30.0%
TCTAGATTATTCACCTTCTA+GGG + chr8_2:20918267-20918286 Msa1239320:intron 30.0%
GCTTAAGGTTAAGAAGTTAA+AGG - chr8_2:20918441-20918460 None:intergenic 30.0%
AACCTATCATTTCATCTCAA+AGG - chr8_2:20918529-20918548 None:intergenic 30.0%
GTAGAGAAAGAATATTGGAA+AGG - chr8_2:20918663-20918682 None:intergenic 30.0%
! AATAGGTGACTAAACGATTT+TGG - chr8_2:20918828-20918847 None:intergenic 30.0%
TTTATTCTTTGGTATTTCGC+AGG + chr8_2:20919166-20919185 Msa1239320:intron 30.0%
AGCAAATCCTTTCATGTAAT+TGG - chr8_2:20919475-20919494 None:intergenic 30.0%
CAGGAAATGTTTCAAATATG+AGG - chr8_2:20919751-20919770 None:intergenic 30.0%
GAAACATTTCCTGTGTAATT+TGG + chr8_2:20919758-20919777 Msa1239320:intron 30.0%
AATTGAACTCCAAATTACAC+AGG - chr8_2:20919770-20919789 None:intergenic 30.0%
ATTTGTAATTTCATTCCCTC+AGG + chr8_2:20920022-20920041 Msa1239320:intron 30.0%
! AATCTTTTGTAGGTCATCAA+TGG - chr8_2:20920079-20920098 None:intergenic 30.0%
! ACTGTTGTTCAATCTTTTGT+AGG - chr8_2:20920089-20920108 None:intergenic 30.0%
TTAAATAGCAGTCACGATTA+AGG + chr8_2:20920361-20920380 Msa1239320:intron 30.0%
TGATTAGTATTAATGCCACT+TGG + chr8_2:20920519-20920538 Msa1239320:intron 30.0%
! TTTTTGATGTAATGCTAGCT+GGG - chr8_2:20920744-20920763 None:intergenic 30.0%
AGGTAAATTCACTTTCTATC+TGG + chr8_2:20920835-20920854 Msa1239320:intron 30.0%
TTGAATGAGCAAATTTAGTG+GGG - chr8_2:20920868-20920887 None:intergenic 30.0%
CTTTGAATGAGCAAATTTAG+TGG - chr8_2:20920870-20920889 None:intergenic 30.0%
GAAAAAAGTTCAAATGACGA+CGG + chr8_2:20920922-20920941 Msa1239320:intron 30.0%
! TTTTCTTTTGCATAGTCAGA+GGG - chr8_2:20921316-20921335 None:intergenic 30.0%
! TTTTTCTTTTGCATAGTCAG+AGG - chr8_2:20921317-20921336 None:intergenic 30.0%
GCAAAAGAAAAATAAGGGTT+AGG + chr8_2:20921325-20921344 Msa1239320:three_prime_UTR 30.0%
TCAAGGAAAAGGATTGGATT+TGG - chr8_2:20910964-20910983 None:intergenic 35.0%
GTAAGTTCAAGGAAAAGGAT+TGG - chr8_2:20910970-20910989 None:intergenic 35.0%
TTGAGGTAAGTTCAAGGAAA+AGG - chr8_2:20910975-20910994 None:intergenic 35.0%
CCATAATTGAGGTAAGTTCA+AGG - chr8_2:20910981-20911000 None:intergenic 35.0%
CCTTGAACTTACCTCAATTA+TGG + chr8_2:20910978-20910997 Msa1239320:five_prime_UTR 35.0%
!! TTATGGATCACTACTTTTGG+GGG + chr8_2:20910995-20911014 Msa1239320:five_prime_UTR 35.0%
CTAGAACAGGAAAATAAGGA+AGG - chr8_2:20911076-20911095 None:intergenic 35.0%
!!! CTTCCTTATTTTCCTGTTCT+AGG + chr8_2:20911074-20911093 Msa1239320:five_prime_UTR 35.0%
GAAACAGATTTGCACCAAAT+TGG - chr8_2:20911135-20911154 None:intergenic 35.0%
!!! GTGTTTAGACCCTTTTTTCT+AGG + chr8_2:20911229-20911248 Msa1239320:intron 35.0%
GGATGAAAGAAACAAGGAAA+TGG - chr8_2:20911317-20911336 None:intergenic 35.0%
!! GAAGGGTGTTTGAAATATGA+AGG - chr8_2:20911338-20911357 None:intergenic 35.0%
TTACCACCCAATAAAACCAA+AGG - chr8_2:20911375-20911394 None:intergenic 35.0%
! TTTCATCCCTTTTCCTTACA+AGG + chr8_2:20911472-20911491 Msa1239320:intron 35.0%
AAAAAAAGTCCTCACCAAGA+AGG - chr8_2:20911514-20911533 None:intergenic 35.0%
! CTTATTGTTTTCTCACCAAG+AGG + chr8_2:20911789-20911808 Msa1239320:CDS 35.0%
TATTCATCGAGGGTTTCTTT+AGG + chr8_2:20911938-20911957 Msa1239320:intron 35.0%
ATTCATCGAGGGTTTCTTTA+GGG + chr8_2:20911939-20911958 Msa1239320:intron 35.0%
GGTGTGAAGATATGTTAGTA+AGG - chr8_2:20912359-20912378 None:intergenic 35.0%
TGTTAGGACTTTGATTGTCT+TGG - chr8_2:20912840-20912859 None:intergenic 35.0%
TCAACTTAATGTTATGGTGG+AGG - chr8_2:20913039-20913058 None:intergenic 35.0%
AAGTATTCGTTATGTAGTGC+AGG - chr8_2:20913211-20913230 None:intergenic 35.0%
CCCTGCATCATAAATGTTAT+AGG - chr8_2:20913354-20913373 None:intergenic 35.0%
CACAAACAATAATCTCCCAA+AGG + chr8_2:20913473-20913492 Msa1239320:intron 35.0%
! ATTGAATCTAGCCTTTAGAG+TGG - chr8_2:20913769-20913788 None:intergenic 35.0%
! GATGAAGACACATTTTCGTT+GGG - chr8_2:20914020-20914039 None:intergenic 35.0%
! AGATGAAGACACATTTTCGT+TGG - chr8_2:20914021-20914040 None:intergenic 35.0%
! TCTTCATCTATCCGTTTTGT+TGG + chr8_2:20914032-20914051 Msa1239320:intron 35.0%
AGCATCATCTTAAAACATGG+GGG - chr8_2:20914074-20914093 None:intergenic 35.0%
GACAATTTCCTAAGGTAGTT+AGG + chr8_2:20914314-20914333 Msa1239320:intron 35.0%
! ATTTTGTGCCTAACTACCTT+AGG - chr8_2:20914325-20914344 None:intergenic 35.0%
TTGTCTTGAAGAGTAGTTCA+AGG + chr8_2:20914538-20914557 Msa1239320:intron 35.0%
ACATGTATAATCAGAGAGCA+AGG + chr8_2:20914650-20914669 Msa1239320:intron 35.0%
GTCAATTGTCATCTTGTGTT+TGG - chr8_2:20914885-20914904 None:intergenic 35.0%
!!! TCTCTCTATTTTGGCATTTG+GGG - chr8_2:20914929-20914948 None:intergenic 35.0%
!!! CTCTCTCTATTTTGGCATTT+GGG - chr8_2:20914930-20914949 None:intergenic 35.0%
AAAAAGAGAGACCACATTTC+TGG + chr8_2:20915415-20915434 Msa1239320:intron 35.0%
AAAAGAGAGACCACATTTCT+GGG + chr8_2:20915416-20915435 Msa1239320:intron 35.0%
AATGATTCTACCCAGAAATG+TGG - chr8_2:20915429-20915448 None:intergenic 35.0%
!!! GATTTTCAAGTGGATTAGGA+AGG - chr8_2:20915453-20915472 None:intergenic 35.0%
! AGATGTAGTTTTTGTCGGAA+GGG - chr8_2:20915486-20915505 None:intergenic 35.0%
! TAGATGTAGTTTTTGTCGGA+AGG - chr8_2:20915487-20915506 None:intergenic 35.0%
!!! GAGCAATTGTGAGTTTTGTT+CGG - chr8_2:20915541-20915560 None:intergenic 35.0%
CTCGAAAACATAACTAGAAG+GGG - chr8_2:20915578-20915597 None:intergenic 35.0%
GGTCTAAGTAGAACATTTGT+GGG - chr8_2:20915966-20915985 None:intergenic 35.0%
TCTACTTAGACCCATAAACA+AGG + chr8_2:20915974-20915993 Msa1239320:intron 35.0%
CTACTTAGACCCATAAACAA+GGG + chr8_2:20915975-20915994 Msa1239320:intron 35.0%
!!! AAAGTTTTAGGGTTGTTTGG+AGG + chr8_2:20916148-20916167 Msa1239320:intron 35.0%
!! CGTTTAGTCTTTTGTTGCTT+TGG - chr8_2:20916176-20916195 None:intergenic 35.0%
!! GATCAAGATAATGGAGAGAT+TGG + chr8_2:20916195-20916214 Msa1239320:intron 35.0%
TAATGCATTCATGCTTGATG+AGG + chr8_2:20916282-20916301 Msa1239320:intron 35.0%
AATGCATTCATGCTTGATGA+GGG + chr8_2:20916283-20916302 Msa1239320:intron 35.0%
GGATCAAAGTAAAGTGATGT+GGG - chr8_2:20916355-20916374 None:intergenic 35.0%
TGGATCAAAGTAAAGTGATG+TGG - chr8_2:20916356-20916375 None:intergenic 35.0%
AAGACTGGATCCATATGTAA+TGG - chr8_2:20916376-20916395 None:intergenic 35.0%
ACTTGATAAAGGAGAAAGAC+TGG - chr8_2:20916391-20916410 None:intergenic 35.0%
GCAATAAGAGACAAATGATC+AGG + chr8_2:20916458-20916477 Msa1239320:intron 35.0%
!! GATGTGATTTTAAGTCCTCT+TGG - chr8_2:20916488-20916507 None:intergenic 35.0%
CACATTTGAACTCCAAAAAG+AGG + chr8_2:20916602-20916621 Msa1239320:intron 35.0%
TGACCTAAAAGCTAAACTCT+TGG + chr8_2:20916658-20916677 Msa1239320:intron 35.0%
!!! TGTCCAAGAGTTTAGCTTTT+AGG - chr8_2:20916664-20916683 None:intergenic 35.0%
! TTTAGGTTTGCCTGTTTGTT+TGG - chr8_2:20916841-20916860 None:intergenic 35.0%
!!! AAGACTGTTTTGATTGCAGA+AGG - chr8_2:20916871-20916890 None:intergenic 35.0%
CTTGGAGGCTTATTGAATAA+AGG - chr8_2:20916992-20917011 None:intergenic 35.0%
! TTATCTATTGGGAGGTGTAA+GGG - chr8_2:20917015-20917034 None:intergenic 35.0%
! GAGTCTTTGGTGTAAATTTC+TGG - chr8_2:20917113-20917132 None:intergenic 35.0%
TCAAGAATTGTGAGTTTGGT+AGG - chr8_2:20917169-20917188 None:intergenic 35.0%
TCTGTCAAGAATTGTGAGTT+TGG - chr8_2:20917173-20917192 None:intergenic 35.0%
GAGGAAGACACAATAATAAG+AGG - chr8_2:20917692-20917711 None:intergenic 35.0%
CATAAGAAAAGAAATGGAGG+AGG - chr8_2:20917922-20917941 None:intergenic 35.0%
!! GTGGTGAGTGTTGATAATTA+AGG + chr8_2:20918084-20918103 Msa1239320:intron 35.0%
AGGTGATTGCACAAGTATTA+AGG - chr8_2:20918188-20918207 None:intergenic 35.0%
GTCTAGATTATTCACCTTCT+AGG + chr8_2:20918266-20918285 Msa1239320:intron 35.0%
!! CACCTTTGAGATGAAATGAT+AGG + chr8_2:20918524-20918543 Msa1239320:intron 35.0%
ATTTAGTAATGAGGGACAAG+AGG - chr8_2:20918568-20918587 None:intergenic 35.0%
CCAGAGTAGAGAAAGAATAT+TGG - chr8_2:20918668-20918687 None:intergenic 35.0%
CCAATATTCTTTCTCTACTC+TGG + chr8_2:20918665-20918684 Msa1239320:intron 35.0%
!! CTTTCTCTACTCTGGAATAT+CGG + chr8_2:20918673-20918692 Msa1239320:intron 35.0%
!! TTTCTCTACTCTGGAATATC+GGG + chr8_2:20918674-20918693 Msa1239320:intron 35.0%
!! AATGTCGGGTTTTGATCAAT+CGG + chr8_2:20918769-20918788 Msa1239320:intron 35.0%
! ACTCTTGTTTCCATTATGAG+TGG + chr8_2:20918951-20918970 Msa1239320:intron 35.0%
! TCTGATCAGCTCATTTGTTA+GGG + chr8_2:20919329-20919348 Msa1239320:intron 35.0%
AGAGGATCCAATTACATGAA+AGG + chr8_2:20919465-20919484 Msa1239320:intron 35.0%
! AATATGAGGGCATGTATTTC+AGG - chr8_2:20919737-20919756 None:intergenic 35.0%
ACCTTCTTGAGACTTCAAAA+CGG + chr8_2:20919910-20919929 Msa1239320:CDS 35.0%
AAGCAAAATTCGAGCAAGAA+AGG + chr8_2:20920122-20920141 Msa1239320:CDS 35.0%
CCTGAGTCTGAATAATAGAA+AGG - chr8_2:20920209-20920228 None:intergenic 35.0%
CCTTTCTATTATTCAGACTC+AGG + chr8_2:20920206-20920225 Msa1239320:intron 35.0%
! TTATTCAGACTCAGGTTTTC+AGG + chr8_2:20920214-20920233 Msa1239320:intron 35.0%
! TATTCAGACTCAGGTTTTCA+GGG + chr8_2:20920215-20920234 Msa1239320:intron 35.0%
AATTGAGCAGCTAAAGGAAA+AGG + chr8_2:20920242-20920261 Msa1239320:CDS 35.0%
GAAAGATGCAATCTCAATTG+TGG - chr8_2:20920437-20920456 None:intergenic 35.0%
! CTTTTTGATGTAATGCTAGC+TGG - chr8_2:20920745-20920764 None:intergenic 35.0%
ATCCAAATTTGTGTGCAGTA+TGG + chr8_2:20921113-20921132 Msa1239320:intron 35.0%
TACCATACTGCACACAAATT+TGG - chr8_2:20921118-20921137 None:intergenic 35.0%
GTATGGTAACTATTCATCAC+AGG + chr8_2:20921130-20921149 Msa1239320:intron 35.0%
!! TGGGGTCAGGTTGATTAATA+AGG + chr8_2:20910885-20910904 Msa1239320:five_prime_UTR 40.0%
CAGGAAAATAAGGAAGGGAA+GGG - chr8_2:20911070-20911089 None:intergenic 40.0%
ACAGGAAAATAAGGAAGGGA+AGG - chr8_2:20911071-20911090 None:intergenic 40.0%
GTGCCTAGAACAGGAAAATA+AGG - chr8_2:20911080-20911099 None:intergenic 40.0%
!!! GTTCCTTTGGTTTTATTGGG+TGG + chr8_2:20911369-20911388 Msa1239320:intron 40.0%
! TGTGTTTTTCCTTCTTGGTG+AGG + chr8_2:20911502-20911521 Msa1239320:intron 40.0%
GTATAGAGAACGCAACAAGT+AGG + chr8_2:20911685-20911704 Msa1239320:CDS 40.0%
AATTCATATAGCCTCCCTCT+TGG - chr8_2:20911807-20911826 None:intergenic 40.0%
! TTTAGGGTGTGTTTGGATTG+AGG + chr8_2:20911955-20911974 Msa1239320:intron 40.0%
TTAGGGTGTGTTTGGATTGA+GGG + chr8_2:20911956-20911975 Msa1239320:intron 40.0%
TGTGTTTGGATTGAGGGTTT+AGG + chr8_2:20911962-20911981 Msa1239320:intron 40.0%
TTTGGATTGAGGGTTTAGGA+GGG + chr8_2:20911966-20911985 Msa1239320:intron 40.0%
TTGAGGGTTTATGAGTGGAA+GGG - chr8_2:20912169-20912188 None:intergenic 40.0%
ATTGAGGGTTTATGAGTGGA+AGG - chr8_2:20912170-20912189 None:intergenic 40.0%
TTGGATTGAGGGTTTATGAG+TGG - chr8_2:20912174-20912193 None:intergenic 40.0%
! TAAGGGTGTGTTTGGATTGA+GGG - chr8_2:20912185-20912204 None:intergenic 40.0%
! ACAAACTCTAAGGGTGTGTT+TGG - chr8_2:20912193-20912212 None:intergenic 40.0%
! TCTAAAGTGAGTCGTTGTGA+TGG - chr8_2:20912380-20912399 None:intergenic 40.0%
!! AATGTTATGGTGGAGGTACT+AGG - chr8_2:20913032-20913051 None:intergenic 40.0%
CAGTACATCACATGTAGTTG+CGG + chr8_2:20913066-20913085 Msa1239320:intron 40.0%
TCGCAAGATCATACGATCTT+GGG - chr8_2:20913586-20913605 None:intergenic 40.0%
TTACAATCTGATAGCCGACA+CGG + chr8_2:20913667-20913686 Msa1239320:intron 40.0%
AAAAGTTGAGGGTCGAAATC+GGG - chr8_2:20913704-20913723 None:intergenic 40.0%
CAAAAGTTGAGGGTCGAAAT+CGG - chr8_2:20913705-20913724 None:intergenic 40.0%
GTTTCGTGGTCAAAAGTTGA+GGG - chr8_2:20913715-20913734 None:intergenic 40.0%
AGTTTCGTGGTCAAAAGTTG+AGG - chr8_2:20913716-20913735 None:intergenic 40.0%
!! TAGCCTTTAGAGTGGAAAAC+GGG - chr8_2:20913761-20913780 None:intergenic 40.0%
!! CTAGCCTTTAGAGTGGAAAA+CGG - chr8_2:20913762-20913781 None:intergenic 40.0%
ATATGATATGAGAAGGGGAG+AGG - chr8_2:20913923-20913942 None:intergenic 40.0%
ACGAGGAAACACCAACAAAA+CGG - chr8_2:20914046-20914065 None:intergenic 40.0%
GTGGGATCTTGTCTATTACA+TGG + chr8_2:20914213-20914232 Msa1239320:intron 40.0%
TATACCCCAACGATCTTTAG+TGG + chr8_2:20914279-20914298 Msa1239320:intron 40.0%
ATACCCCAACGATCTTTAGT+GGG + chr8_2:20914280-20914299 Msa1239320:intron 40.0%
ACTTGTGGGACTATCAAATG+TGG + chr8_2:20914452-20914471 Msa1239320:intron 40.0%
CAAATGTGGTTTGATGCAAG+TGG + chr8_2:20914466-20914485 Msa1239320:intron 40.0%
TCTAGATCAAGGTTCAAACG+AGG + chr8_2:20914498-20914517 Msa1239320:intron 40.0%
CTTGAAGAGTAGTTCAAGGA+TGG + chr8_2:20914542-20914561 Msa1239320:intron 40.0%
!!! CCTCTCTCTATTTTGGCATT+TGG - chr8_2:20914931-20914950 None:intergenic 40.0%
CCAAATGCCAAAATAGAGAG+AGG + chr8_2:20914928-20914947 Msa1239320:intron 40.0%
! CCTTTCTCCTCTCTCTATTT+TGG - chr8_2:20914938-20914957 None:intergenic 40.0%
CCAAAATAGAGAGAGGAGAA+AGG + chr8_2:20914935-20914954 Msa1239320:intron 40.0%
! TAGTTTTTGTCGGAAGGGTT+TGG - chr8_2:20915481-20915500 None:intergenic 40.0%
AATGGTCATCTACCTCAAGT+TGG + chr8_2:20915514-20915533 Msa1239320:intron 40.0%
GGGTCTAAGTAGAACATTTG+TGG - chr8_2:20915967-20915986 None:intergenic 40.0%
CTTCTTGTTGGAAATTACGG+AGG + chr8_2:20916428-20916447 Msa1239320:intron 40.0%
AAATGATCAGGAACACCAAG+AGG + chr8_2:20916470-20916489 Msa1239320:intron 40.0%
!! TCAATGTCCTAAGGTTTTGG+TGG - chr8_2:20916512-20916531 None:intergenic 40.0%
ACAACTGGACTTGAAGGAAA+TGG - chr8_2:20916699-20916718 None:intergenic 40.0%
TTGCAGAAGGAAGAAGCTTT+AGG - chr8_2:20916858-20916877 None:intergenic 40.0%
ACCCTTCCAAAATGACACTA+AGG + chr8_2:20916958-20916977 Msa1239320:intron 40.0%
!!! CCCTTAGTGTCATTTTGGAA+GGG - chr8_2:20916962-20916981 None:intergenic 40.0%
CCCTTCCAAAATGACACTAA+GGG + chr8_2:20916959-20916978 Msa1239320:intron 40.0%
!!! ATGTGCCCTTAGTGTCATTT+TGG - chr8_2:20916967-20916986 None:intergenic 40.0%
! CTTATCTATTGGGAGGTGTA+AGG - chr8_2:20917016-20917035 None:intergenic 40.0%
TCTGTGTCTTATCTATTGGG+AGG - chr8_2:20917023-20917042 None:intergenic 40.0%
TTGTGAGTTTGGTAGGAAAG+TGG - chr8_2:20917162-20917181 None:intergenic 40.0%
! TGTTGGAGTGCTATTAATCC+TGG - chr8_2:20917628-20917647 None:intergenic 40.0%
! TCAACTGATTCAGATGGTGT+TGG - chr8_2:20917645-20917664 None:intergenic 40.0%
AAAGGTCCTATGTTCGAATC+CGG - chr8_2:20918423-20918442 None:intergenic 40.0%
! GCTCAATCGGTTTAAGCTTA+AGG - chr8_2:20918456-20918475 None:intergenic 40.0%
TAGAAGTAGAATCGAGGTGT+TGG - chr8_2:20918482-20918501 None:intergenic 40.0%
! CGTTTCTAGAAGTAGAATCG+AGG - chr8_2:20918488-20918507 None:intergenic 40.0%
GAGAAAACTTGAACCTTGGA+TGG - chr8_2:20918702-20918721 None:intergenic 40.0%
CCATGAGAAAACTTGAACCT+TGG - chr8_2:20918706-20918725 None:intergenic 40.0%
!! CCAAGGTTCAAGTTTTCTCA+TGG + chr8_2:20918703-20918722 Msa1239320:intron 40.0%
CATGGCAACTCATTCTTGAT+AGG + chr8_2:20918721-20918740 Msa1239320:intron 40.0%
!! ATGTCGGGTTTTGATCAATC+GGG + chr8_2:20918770-20918789 Msa1239320:intron 40.0%
!! GCTTCCTTATGCACTTTTTG+TGG + chr8_2:20918795-20918814 Msa1239320:intron 40.0%
! CTCTCCACAAAAAGTGCATA+AGG - chr8_2:20918802-20918821 None:intergenic 40.0%
!! CTTATGCACTTTTTGTGGAG+AGG + chr8_2:20918800-20918819 Msa1239320:intron 40.0%
! GTCACCTATTTGTTACCTGT+CGG + chr8_2:20918838-20918857 Msa1239320:intron 40.0%
! TCACCTATTTGTTACCTGTC+GGG + chr8_2:20918839-20918858 Msa1239320:intron 40.0%
TTGTTTCCATTATGAGTGGC+AGG + chr8_2:20918955-20918974 Msa1239320:intron 40.0%
ACAGGTAGGTTCTTGAGTAA+GGG + chr8_2:20918999-20919018 Msa1239320:intron 40.0%
TCTTGGGTCAGTATCTTTGA+TGG + chr8_2:20919048-20919067 Msa1239320:intron 40.0%
! GGTCAGTATCTTTGATGGAT+GGG + chr8_2:20919053-20919072 Msa1239320:intron 40.0%
AACAAAGAGCTCAGACACAT+GGG - chr8_2:20919112-20919131 None:intergenic 40.0%
!! GTAGGGGTTTTTCAGTTCTT+TGG + chr8_2:20919192-20919211 Msa1239320:intron 40.0%
CTCTGATCAGCTCATTTGTT+AGG + chr8_2:20919328-20919347 Msa1239320:intron 40.0%
! ATCAGCTCATTTGTTAGGGA+GGG + chr8_2:20919333-20919352 Msa1239320:intron 40.0%
GCATCATATTGCACCTGTAT+AGG - chr8_2:20919366-20919385 None:intergenic 40.0%
ACACCATACTGCAATTGTAG+AGG + chr8_2:20919447-20919466 Msa1239320:intron 40.0%
GATCCTCTACAATTGCAGTA+TGG - chr8_2:20919453-20919472 None:intergenic 40.0%
!!! ACCGTTTTGAAGTCTCAAGA+AGG - chr8_2:20919914-20919933 None:intergenic 40.0%
TTCTCCTAAGAGTTTCCTGA+GGG - chr8_2:20920040-20920059 None:intergenic 40.0%
AAACTCTTAGGAGAAGGTCT+AGG + chr8_2:20920045-20920064 Msa1239320:CDS 40.0%
AACTCTTAGGAGAAGGTCTA+GGG + chr8_2:20920046-20920065 Msa1239320:CDS 40.0%
GGAACAAATTGAGCAGCTAA+AGG + chr8_2:20920236-20920255 Msa1239320:CDS 40.0%
AAAGGTTCGAAACTGCAATC+TGG - chr8_2:20920489-20920508 None:intergenic 40.0%
! CATGGCATTTTCAGCAACTA+GGG - chr8_2:20920805-20920824 None:intergenic 40.0%
ATTTACCTTCTCTGTGAGCA+TGG - chr8_2:20920823-20920842 None:intergenic 40.0%
CACAGGAAGCAACAAATGAT+CGG + chr8_2:20921147-20921166 Msa1239320:CDS 40.0%
AAGTAGTCCAAGTTCAGATG+TGG + chr8_2:20921208-20921227 Msa1239320:CDS 40.0%
GTGGAGACTGAATTGTTCAT+TGG + chr8_2:20921227-20921246 Msa1239320:CDS 40.0%
! ATGCGTCTTGTTCTTGTTTC+TGG - chr8_2:20921257-20921276 None:intergenic 40.0%
AACAAGACGCATTTCTCCAA+AGG + chr8_2:20921265-20921284 Msa1239320:CDS 40.0%
GCATAGTCAGAGGGATTAAT+CGG - chr8_2:20921307-20921326 None:intergenic 40.0%
GGTAGCTGTAGAAGCAAGAT+GGG + chr8_2:20910866-20910885 Msa1239320:five_prime_UTR 45.0%
GTAGCTGTAGAAGCAAGATG+GGG + chr8_2:20910867-20910886 Msa1239320:five_prime_UTR 45.0%
TAAAGGGTTGTGCCTAGAAC+AGG - chr8_2:20911089-20911108 None:intergenic 45.0%
ATCAGTGTTGTGTGATGCTG+AGG + chr8_2:20911761-20911780 Msa1239320:CDS 45.0%
! TTGTTTTCTCACCAAGAGGG+AGG + chr8_2:20911793-20911812 Msa1239320:CDS 45.0%
!! GGGTTTCTTTAGGGTGTGTT+TGG + chr8_2:20911948-20911967 Msa1239320:intron 45.0%
GTTTGGATTGAGGGTTTAGG+AGG + chr8_2:20911965-20911984 Msa1239320:intron 45.0%
TTGGATTGAGGGTTTAGGAG+GGG + chr8_2:20911967-20911986 Msa1239320:intron 45.0%
! CTAAGGGTGTGTTTGGATTG+AGG - chr8_2:20912186-20912205 None:intergenic 45.0%
TGCAATAGAGGTCCCAATCA+TGG + chr8_2:20913538-20913557 Msa1239320:intron 45.0%
CGATCCTGACAACCATGATT+GGG - chr8_2:20913553-20913572 None:intergenic 45.0%
CTCGCAAGATCATACGATCT+TGG - chr8_2:20913587-20913606 None:intergenic 45.0%
GTCGGCTATCAGATTGTAAC+CGG - chr8_2:20913666-20913685 None:intergenic 45.0%
GATCCCACTAAAGATCGTTG+GGG - chr8_2:20914286-20914305 None:intergenic 45.0%
GGATCCCACTAAAGATCGTT+GGG - chr8_2:20914287-20914306 None:intergenic 45.0%
AGGATCCCACTAAAGATCGT+TGG - chr8_2:20914288-20914307 None:intergenic 45.0%
ATGTGGTTTGATGCAAGTGG+AGG + chr8_2:20914469-20914488 Msa1239320:intron 45.0%
ATCAAGGTTCAAACGAGGCT+TGG + chr8_2:20914503-20914522 Msa1239320:intron 45.0%
ATCAGAGAGCAAGGTTCAAG+TGG + chr8_2:20914659-20914678 Msa1239320:intron 45.0%
TTCGTAGCACGCCAAATAAG+AGG + chr8_2:20915344-20915363 Msa1239320:intron 45.0%
!! GTTTTGTTCGGACCAACTTG+AGG - chr8_2:20915529-20915548 None:intergenic 45.0%
!! AGAAGGGGAGTGTTAACGAA+TGG - chr8_2:20915563-20915582 None:intergenic 45.0%
CACATCTCCACCAAAACCTT+AGG + chr8_2:20916502-20916521 Msa1239320:intron 45.0%
! GATGATTTCGCGCCTCTTTT+TGG - chr8_2:20916617-20916636 None:intergenic 45.0%
! AGAGGCGCGAAATCATCTTT+CGG + chr8_2:20916620-20916639 Msa1239320:intron 45.0%
! TGTTTGGAGGAGGAAGCTTT+TGG - chr8_2:20916825-20916844 None:intergenic 45.0%
TTTGCCTGTTTGTTTGGAGG+AGG - chr8_2:20916835-20916854 None:intergenic 45.0%
AGGTTTGCCTGTTTGTTTGG+AGG - chr8_2:20916838-20916857 None:intergenic 45.0%
!!! GCCCTTAGTGTCATTTTGGA+AGG - chr8_2:20916963-20916982 None:intergenic 45.0%
CGGTATCGTTCAATCGTTTC+TGG - chr8_2:20917597-20917616 None:intergenic 45.0%
AACGATACCGCAATCATACC+AGG + chr8_2:20917607-20917626 Msa1239320:CDS 45.0%
GCTAGAACATGTTCCCTAGA+AGG - chr8_2:20918283-20918302 None:intergenic 45.0%
ATTCGTCCGGATTCGAACAT+AGG + chr8_2:20918414-20918433 Msa1239320:intron 45.0%
!! GAGGTGTTGGTTAGCTCAAT+CGG - chr8_2:20918469-20918488 None:intergenic 45.0%
TGAAGCAGGTTCACTCTAGT+CGG - chr8_2:20918750-20918769 None:intergenic 45.0%
GAGTGAACCTGCTTCAATGT+CGG + chr8_2:20918754-20918773 Msa1239320:intron 45.0%
AGTGAACCTGCTTCAATGTC+GGG + chr8_2:20918755-20918774 Msa1239320:intron 45.0%
TCAAAACCCGACATTGAAGC+AGG - chr8_2:20918764-20918783 None:intergenic 45.0%
GCAAAAATCCAGTTCACCTC+TGG + chr8_2:20918900-20918919 Msa1239320:intron 45.0%
CTCAAAAACCGAGTATCCAG+AGG - chr8_2:20918919-20918938 None:intergenic 45.0%
!! CTGGATACTCGGTTTTTGAG+AGG + chr8_2:20918919-20918938 Msa1239320:intron 45.0%
TTTCCATTATGAGTGGCAGG+TGG + chr8_2:20918958-20918977 Msa1239320:intron 45.0%
GACAGGTAGGTTCTTGAGTA+AGG + chr8_2:20918998-20919017 Msa1239320:intron 45.0%
CTTGAGTAAGGGTCTTGCAT+CGG + chr8_2:20919010-20919029 Msa1239320:intron 45.0%
! CTTGCATCGGTGCATTTAAG+CGG + chr8_2:20919023-20919042 Msa1239320:intron 45.0%
! TTGCATCGGTGCATTTAAGC+GGG + chr8_2:20919024-20919043 Msa1239320:intron 45.0%
GGGTCAGTATCTTTGATGGA+TGG + chr8_2:20919052-20919071 Msa1239320:intron 45.0%
CAACAAAGAGCTCAGACACA+TGG - chr8_2:20919113-20919132 None:intergenic 45.0%
CATGTGTCTGAGCTCTTTGT+TGG + chr8_2:20919111-20919130 Msa1239320:intron 45.0%
CTCTTTGTTGGCAGGTTTCT+AGG + chr8_2:20919123-20919142 Msa1239320:intron 45.0%
!! TTCTAGGCTAGCCTTAGTGT+TGG + chr8_2:20919139-20919158 Msa1239320:intron 45.0%
!! TCTAGGCTAGCCTTAGTGTT+GGG + chr8_2:20919140-20919159 Msa1239320:intron 45.0%
GAATAAACCGCCCAACACTA+AGG - chr8_2:20919153-20919172 None:intergenic 45.0%
GTGTTGGGCGGTTTATTCTT+TGG + chr8_2:20919155-20919174 Msa1239320:intron 45.0%
TTGGTATTTCGCAGGTGTGT+AGG + chr8_2:20919174-20919193 Msa1239320:intron 45.0%
TGGTATTTCGCAGGTGTGTA+GGG + chr8_2:20919175-20919194 Msa1239320:intron 45.0%
! GATCAGCTCATTTGTTAGGG+AGG + chr8_2:20919332-20919351 Msa1239320:intron 45.0%
GGAGGGATTTGAACCTATAC+AGG + chr8_2:20919350-20919369 Msa1239320:intron 45.0%
CATTCCCTCAGGAAACTCTT+AGG + chr8_2:20920033-20920052 Msa1239320:intron 45.0%
CTTCTCCTAAGAGTTTCCTG+AGG - chr8_2:20920041-20920060 None:intergenic 45.0%
CTCAGGAAACTCTTAGGAGA+AGG + chr8_2:20920039-20920058 Msa1239320:intron 45.0%
GCAATCTGGTCGCAACATAA+TGG - chr8_2:20920475-20920494 None:intergenic 45.0%
! GCATGGCATTTTCAGCAACT+AGG - chr8_2:20920806-20920825 None:intergenic 45.0%
AAATGCCATGCTCACAGAGA+AGG + chr8_2:20920815-20920834 Msa1239320:CDS 45.0%
GGACTACTTTGATCTGCAGA+AGG - chr8_2:20921197-20921216 None:intergenic 45.0%
TCAGTCTCCACATCTGAACT+TGG - chr8_2:20921218-20921237 None:intergenic 45.0%
! TCCAAAGGTGTAGCTAGTTG+AGG + chr8_2:20921280-20921299 Msa1239320:exon 45.0%
TCCTCAACTAGCTACACCTT+TGG - chr8_2:20921284-20921303 None:intergenic 45.0%
TGCATTGTATATGACCCGTG+CGG - chr8_2:20921483-20921502 None:intergenic 45.0%
!! AAATTAATAATTCATATATA+AGG - chr8_2:20913173-20913192 None:intergenic 5.0%
!!! GATTATTATTAAATTTTTTT+AGG - chr8_2:20915112-20915131 None:intergenic 5.0%
!!! TTTTTTTTTTTTTATGTTTT+AGG - chr8_2:20918208-20918227 None:intergenic 5.0%
!!! CTATATAATTTTAAATTTTA+CGG + chr8_2:20920167-20920186 Msa1239320:intron 5.0%
GGGTAGCTGTAGAAGCAAGA+TGG + chr8_2:20910865-20910884 Msa1239320:five_prime_UTR 50.0%
TGTAGAAGCAAGATGGGGTC+AGG + chr8_2:20910872-20910891 Msa1239320:five_prime_UTR 50.0%
ATTGAGGGTTTAGGAGGGGA+AGG + chr8_2:20911971-20911990 Msa1239320:intron 50.0%
TTGAGGGTTTAGGAGGGGAA+GGG + chr8_2:20911972-20911991 Msa1239320:intron 50.0%
GGTTTATGAGTGGAAGGGAG+GGG - chr8_2:20912164-20912183 None:intergenic 50.0%
GGGTTTATGAGTGGAAGGGA+GGG - chr8_2:20912165-20912184 None:intergenic 50.0%
AGGGTTTATGAGTGGAAGGG+AGG - chr8_2:20912166-20912185 None:intergenic 50.0%
AGGTCCCAATCATGGTTGTC+AGG + chr8_2:20913546-20913565 Msa1239320:intron 50.0%
GCGATCCTGACAACCATGAT+TGG - chr8_2:20913554-20913573 None:intergenic 50.0%
! TCATGATGCCTCCACCGATT+TGG + chr8_2:20913607-20913626 Msa1239320:intron 50.0%
ATCTCGGACCAGCTCCAAAT+CGG - chr8_2:20913624-20913643 None:intergenic 50.0%
! ATTTGGAGCTGGTCCGAGAT+CGG + chr8_2:20913624-20913643 Msa1239320:intron 50.0%
AGATTGTAACCGGCCAAACC+GGG - chr8_2:20913656-20913675 None:intergenic 50.0%
CAGATTGTAACCGGCCAAAC+CGG - chr8_2:20913657-20913676 None:intergenic 50.0%
! TCTGATAGCCGACACGGTTT+TGG + chr8_2:20913673-20913692 Msa1239320:intron 50.0%
! GGCAGAATGAGCTAGTTTCG+TGG - chr8_2:20913729-20913748 None:intergenic 50.0%
! GTGGAAAACGGGTCGATTTC+TGG - chr8_2:20913750-20913769 None:intergenic 50.0%
! CGACCCGTTTTCCACTCTAA+AGG + chr8_2:20913755-20913774 Msa1239320:intron 50.0%
AGAAGGGGAGAGGATGTGAT+AGG - chr8_2:20913913-20913932 None:intergenic 50.0%
!! AGATGGGAAAAGGCATTGCG+AGG + chr8_2:20914354-20914373 Msa1239320:intron 50.0%
!! GATGGGAAAAGGCATTGCGA+GGG + chr8_2:20914355-20914374 Msa1239320:intron 50.0%
GGAGGTCGATGTCTAGATCA+AGG + chr8_2:20914487-20914506 Msa1239320:intron 50.0%
GTTCAAGGATGGAGAGAGCA+AGG + chr8_2:20914553-20914572 Msa1239320:intron 50.0%
TGGAGAGAGCAAGGTTCAAG+TGG + chr8_2:20914562-20914581 Msa1239320:intron 50.0%
GTTGGAAATTACGGAGGAGC+AGG + chr8_2:20916434-20916453 Msa1239320:intron 50.0%
GCTTCCTCCTCCAAACAAAC+AGG + chr8_2:20916828-20916847 Msa1239320:intron 50.0%
! TATTGGGAGGTGTAAGGGCT+TGG - chr8_2:20917010-20917029 None:intergenic 50.0%
GGAATATCGGGATCCATCCA+AGG + chr8_2:20918686-20918705 Msa1239320:intron 50.0%
GAAGCAGGTTCACTCTAGTC+GGG - chr8_2:20918749-20918768 None:intergenic 50.0%
CGACCCGACAGGTAACAAAT+AGG - chr8_2:20918845-20918864 None:intergenic 50.0%
CCAGTTCACCTCTGGATACT+CGG + chr8_2:20918908-20918927 Msa1239320:intron 50.0%
!! CTCGGTTTTTGAGAGGACTC+TGG + chr8_2:20918926-20918945 Msa1239320:intron 50.0%
GTTCCACCTGCCACTCATAA+TGG - chr8_2:20918964-20918983 None:intergenic 50.0%
TACCTGTCCCAACAGAGGAT+CGG - chr8_2:20918986-20919005 None:intergenic 50.0%
! TGCATCGGTGCATTTAAGCG+GGG + chr8_2:20919025-20919044 Msa1239320:intron 50.0%
GTGCATTTAAGCGGGGTCTT+GGG + chr8_2:20919032-20919051 Msa1239320:intron 50.0%
AGCTTACTACCCCAAGAGTG+TGG - chr8_2:20919079-20919098 None:intergenic 50.0%
CACTCTTGGGGTAGTAAGCT+TGG + chr8_2:20919079-20919098 Msa1239320:intron 50.0%
TGTCTGAGCTCTTTGTTGGC+AGG + chr8_2:20919115-20919134 Msa1239320:intron 50.0%
GGTATTTCGCAGGTGTGTAG+GGG + chr8_2:20919176-20919195 Msa1239320:intron 50.0%
TATGAGTGGAAGGGAGGGGA+GGG - chr8_2:20912160-20912179 None:intergenic 55.0%
TTATGAGTGGAAGGGAGGGG+AGG - chr8_2:20912161-20912180 None:intergenic 55.0%
AACCGGGTCTTCTCCGATCT+CGG - chr8_2:20913640-20913659 None:intergenic 55.0%
AGATCGGAGAAGACCCGGTT+TGG + chr8_2:20913640-20913659 Msa1239320:intron 55.0%
! AAAACATGGGGGTGCAGACG+AGG - chr8_2:20914063-20914082 None:intergenic 55.0%
CCGAGTATCCAGAGGTGAAC+TGG - chr8_2:20918911-20918930 None:intergenic 55.0%
AGGTGGAACCGATCCTCTGT+TGG + chr8_2:20918975-20918994 Msa1239320:intron 55.0%
GGTGGAACCGATCCTCTGTT+GGG + chr8_2:20918976-20918995 Msa1239320:intron 55.0%
AACCGATCCTCTGTTGGGAC+AGG + chr8_2:20918981-20919000 Msa1239320:intron 55.0%
GATCCTCTGTTGGGACAGGT+AGG + chr8_2:20918985-20919004 Msa1239320:intron 55.0%
GAACCTACCTGTCCCAACAG+AGG - chr8_2:20918991-20919010 None:intergenic 55.0%
GGTGCATTTAAGCGGGGTCT+TGG + chr8_2:20919031-20919050 Msa1239320:intron 55.0%
! TGATGGATGGGCCACACTCT+TGG + chr8_2:20919065-20919084 Msa1239320:intron 55.0%
GATGGATGGGCCACACTCTT+GGG + chr8_2:20919066-20919085 Msa1239320:intron 55.0%
ATGGATGGGCCACACTCTTG+GGG + chr8_2:20919067-20919086 Msa1239320:intron 55.0%
!! AGGCTAGCCTTAGTGTTGGG+CGG + chr8_2:20919143-20919162 Msa1239320:intron 55.0%
ATATGACCCGTGCGGTAGCA+CGG - chr8_2:20921475-20921494 None:intergenic 55.0%
AGGGTTTAGGAGGGGAAGGG+AGG + chr8_2:20911975-20911994 Msa1239320:intron 60.0%
GGGTTTAGGAGGGGAAGGGA+GGG + chr8_2:20911976-20911995 Msa1239320:intron 60.0%
GGTTTAGGAGGGGAAGGGAG+GGG + chr8_2:20911977-20911996 Msa1239320:intron 60.0%
!! TGCCTCCACCGATTTGGAGC+TGG + chr8_2:20913613-20913632 Msa1239320:intron 60.0%
GACCAGCTCCAAATCGGTGG+AGG - chr8_2:20913618-20913637 None:intergenic 60.0%
TCGGACCAGCTCCAAATCGG+TGG - chr8_2:20913621-20913640 None:intergenic 60.0%
GTCCGAGATCGGAGAAGACC+CGG + chr8_2:20913635-20913654 Msa1239320:intron 60.0%
GGGTCGAGCCAAAACCGTGT+CGG - chr8_2:20913684-20913703 None:intergenic 60.0%
! TGGGAGGTGTAAGGGCTTGG+AGG - chr8_2:20917007-20917026 None:intergenic 60.0%
CCTGTTAGAAGCGACCCGAC+AGG - chr8_2:20918856-20918875 None:intergenic 60.0%
CCTGTCGGGTCGCTTCTAAC+AGG + chr8_2:20918853-20918872 Msa1239320:intron 60.0%
TTTCCACCCGTGCTACCGCA+CGG + chr8_2:20921465-20921484 Msa1239320:three_prime_UTR 60.0%
TATGACCCGTGCGGTAGCAC+GGG - chr8_2:20921474-20921493 None:intergenic 60.0%
TTAGGAGGGGAAGGGAGGGG+AGG + chr8_2:20911980-20911999 Msa1239320:intron 65.0%
TAGGAGGGGAAGGGAGGGGA+GGG + chr8_2:20911981-20912000 Msa1239320:intron 65.0%
!! CGGAGAAGACCCGGTTTGGC+CGG + chr8_2:20913644-20913663 Msa1239320:intron 65.0%
TTCCACCCGTGCTACCGCAC+GGG + chr8_2:20921466-20921485 Msa1239320:three_prime_UTR 65.0%
GACCCGTGCGGTAGCACGGG+TGG - chr8_2:20921471-20921490 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 20910792 20921583 20910792 ID=Msa1239320;Name=Msa1239320
chr8_2 mRNA 20910792 20921583 20910792 ID=Msa1239320-mRNA-1;Parent=Msa1239320;Name=Msa1239320-mRNA-1;_AED=0.17;_eAED=0.17;_QI=409|1|1|1|0.85|0.75|8|291|224
chr8_2 exon 20910792 20911183 20910792 ID=Msa1239320-mRNA-1:exon:7538;Parent=Msa1239320-mRNA-1
chr8_2 exon 20911640 20911838 20911640 ID=Msa1239320-mRNA-1:exon:7539;Parent=Msa1239320-mRNA-1
chr8_2 exon 20917590 20917674 20917590 ID=Msa1239320-mRNA-1:exon:7540;Parent=Msa1239320-mRNA-1
chr8_2 exon 20919870 20919931 20919870 ID=Msa1239320-mRNA-1:exon:7541;Parent=Msa1239320-mRNA-1
chr8_2 exon 20920044 20920143 20920044 ID=Msa1239320-mRNA-1:exon:7542;Parent=Msa1239320-mRNA-1
chr8_2 exon 20920222 20920263 20920222 ID=Msa1239320-mRNA-1:exon:7543;Parent=Msa1239320-mRNA-1
chr8_2 exon 20920795 20920836 20920795 ID=Msa1239320-mRNA-1:exon:7544;Parent=Msa1239320-mRNA-1
chr8_2 exon 20921131 20921583 20921131 ID=Msa1239320-mRNA-1:exon:7545;Parent=Msa1239320-mRNA-1
chr8_2 five_prime_UTR 20910792 20911183 20910792 ID=Msa1239320-mRNA-1:five_prime_utr;Parent=Msa1239320-mRNA-1
chr8_2 five_prime_UTR 20911640 20911656 20911640 ID=Msa1239320-mRNA-1:five_prime_utr;Parent=Msa1239320-mRNA-1
chr8_2 CDS 20911657 20911838 20911657 ID=Msa1239320-mRNA-1:cds;Parent=Msa1239320-mRNA-1
chr8_2 CDS 20917590 20917674 20917590 ID=Msa1239320-mRNA-1:cds;Parent=Msa1239320-mRNA-1
chr8_2 CDS 20919870 20919931 20919870 ID=Msa1239320-mRNA-1:cds;Parent=Msa1239320-mRNA-1
chr8_2 CDS 20920044 20920143 20920044 ID=Msa1239320-mRNA-1:cds;Parent=Msa1239320-mRNA-1
chr8_2 CDS 20920222 20920263 20920222 ID=Msa1239320-mRNA-1:cds;Parent=Msa1239320-mRNA-1
chr8_2 CDS 20920795 20920836 20920795 ID=Msa1239320-mRNA-1:cds;Parent=Msa1239320-mRNA-1
chr8_2 CDS 20921131 20921292 20921131 ID=Msa1239320-mRNA-1:cds;Parent=Msa1239320-mRNA-1
chr8_2 three_prime_UTR 20921293 20921583 20921293 ID=Msa1239320-mRNA-1:three_prime_utr;Parent=Msa1239320-mRNA-1
Gene Sequence

>Msa1239320

ATGGTGAGAGGAAAGACACAAATGAAGCGTATAGAGAACGCAACAAGTAGGCAAGTAACATTCTCAAAGAGAAGAAATGGTTTGTTGAAGAAAGCCTTTGAATTATCAGTGTTGTGTGATGCTGAGGTTGCTCTTATTGTTTTCTCACCAAGAGGGAGGCTATATGAATTTGCTAGCTCTAGCATTCCAGAAACGATTGAACGATACCGCAATCATACCAGGATTAATAGCACTCCAACACCATCTGAATCAGTTGAAAATACTCAGCAACTGAAGGAAGAAGCAGAAAACATGATGAAAAAGATTGACCTTCTTGAGACTTCAAAACGGAAACTCTTAGGAGAAGGTCTAGGGTCTTGTTCCATTGATGACCTACAAAAGATTGAACAACAGTTAGAGAGAAGTATAAGCAAAATTCGAGCAAGAAAGACTCAGGTTTTCAGGGAACAAATTGAGCAGCTAAAGGAAAAGGAAAAAACCCTAGTTGCTGAAAATGCCATGCTCACAGAGAAGTATGGTAACTATTCATCACAGGAAGCAACAAATGATCGGAGAGAGAATATAGCTGAAGCTGAACCTTCTGCAGATCAAAGTAGTCCAAGTTCAGATGTGGAGACTGAATTGTTCATTGGTCTTCCAGAAACAAGAACAAGACGCATTTCTCCAAAGGTGTAG
Protein sequence

>Msa1239320

MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASSSIPETIERYRNHTRINSTPTPSESVENTQQLKEEAENMMKKIDLLETSKRKLLGEGLGSCSIDDLQKIEQQLERSISKIRARKTQVFREQIEQLKEKEKTLVAENAMLTEKYGNYSSQEATNDRRENIAEAEPSADQSSPSSDVETELFIGLPETRTRRISPKV*