AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1244090

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1244090 MtrunA17_Chr8g0358881 85.986 421 6 3 1 371 1 418 0.0 710
Msa1244090 MtrunA17_Chr2g0299491 48.418 316 143 7 34 333 18 329 9.20e-89 273
Msa1244090 MtrunA17_Chr4g0071061 54.511 266 114 5 73 333 60 323 3.26e-84 262
Msa1244090 MtrunA17_Chr7g0257041 39.394 297 160 8 53 332 40 333 8.73e-55 185
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1244090 AT1G79050.1 79.701 335 64 2 6 336 15 349 0.0 530
Msa1244090 AT1G79050.2 79.567 323 62 2 6 324 15 337 0.0 510
Msa1244090 AT2G19490.1 53.480 273 120 5 70 337 58 328 2.63e-85 265
Msa1244090 AT3G10140.1 40.702 285 159 5 53 332 48 327 1.63e-52 179
Msa1244090 AT3G32920.1 50.495 202 79 5 101 301 12 193 5.08e-49 165
Msa1244090 AT3G32920.5 47.590 166 71 2 101 265 12 162 9.50e-40 139
Msa1244090 AT3G32920.3 50.360 139 53 3 101 238 12 135 1.24e-30 116
Msa1244090 AT3G32920.2 50.360 139 53 3 101 238 12 135 1.24e-30 116
Msa1244090 AT3G32920.4 52.703 74 35 0 165 238 9 82 6.45e-14 68.9

Find 105 sgRNAs with CRISPR-Local

Find 797 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGGTCTTCCCACTGCTTTC+TGG 0.112610 8_2:+31698306 None:intergenic
GCACTCTTACACGAACTTTA+AGG 0.157262 8_2:+31697138 None:intergenic
TATTCTTTCTTCAACATAAA+TGG 0.167081 8_2:-31690316 Msa1244090:three_prime_UTR
CAAGTACCTTATATCTTATT+TGG 0.169890 8_2:+31697607 None:intergenic
TATATCTGTTTCCAGATATT+TGG 0.171997 8_2:-31698330 Msa1244090:intron
TTGTAGATTGGTGTCTATTA+TGG 0.178441 8_2:-31697463 Msa1244090:intron
ATTCCACCACTTGTCACTTC+TGG 0.258174 8_2:+31697436 None:intergenic
CTTTGACTCGACCAGTTTAA+TGG 0.270508 8_2:-31690166 Msa1244090:three_prime_UTR
ACCTCTACAATTCTTCCTTT+TGG 0.272094 8_2:+31698619 None:intergenic
TTGGCTTTAGACTTTGCTTT+AGG 0.292232 8_2:-31698652 Msa1244090:CDS
TTGACGCTCGCTTCGTTGAT+AGG 0.306271 8_2:-31702971 Msa1244090:CDS
CGACTAGAAATTCGTTCTAT+AGG 0.309774 8_2:-31697388 Msa1244090:CDS
GCCGAATTCGATATTTCATT+TGG 0.311187 8_2:-31694872 Msa1244090:CDS
AGAATGAAAGTGTGGGGTTT+TGG 0.317096 8_2:+31703137 None:intergenic
GCCAACTTCTTCATCTCCTT+TGG 0.320234 8_2:+31697160 None:intergenic
TGGACGTAGCTTTAATGATT+AGG 0.325944 8_2:-31690290 Msa1244090:three_prime_UTR
AAGAGTACAACCAGCTTTAG+AGG 0.344065 8_2:+31697641 None:intergenic
TCTGAACCAAATAAGATATA+AGG 0.346004 8_2:-31697613 Msa1244090:intron
ATTAATGTATAGGGAGAGAT+TGG 0.361959 8_2:-31697729 Msa1244090:intron
TCCAAATGAAATATCGAATT+CGG 0.363933 8_2:+31694871 None:intergenic
TTCTTCAACATAAATGGAAC+TGG 0.368702 8_2:-31690310 Msa1244090:three_prime_UTR
TCGAATTCGGCTACTTTGTA+AGG 0.385241 8_2:+31694884 None:intergenic
AAGTTTGGGTGATAGATTGC+AGG 0.396964 8_2:-31690355 Msa1244090:three_prime_UTR
AATTGTGTTGTGAAAGAAAC+AGG 0.401283 8_2:+31703274 None:intergenic
AATGCAGCAAATGGGATTGC+AGG 0.404303 8_2:-31697706 Msa1244090:CDS
AGAGATTGGAATGCAGCAAA+TGG 0.404804 8_2:-31697715 Msa1244090:CDS
CACTGGTTCGACCATTAAAC+TGG 0.407237 8_2:+31690155 None:intergenic
GACTAGAAATTCGTTCTATA+GGG 0.407782 8_2:-31697387 Msa1244090:CDS
AAAAGGTAGTGTTACGAGAT+TGG 0.413731 8_2:-31698880 Msa1244090:CDS
GTCCACGCAAATGAGATCTA+TGG 0.418614 8_2:+31697872 None:intergenic
TTAGACTTTGCTTTAGGTGG+TGG 0.421314 8_2:-31698646 Msa1244090:CDS
GTTCACTTCAACTTCTGCTC+GGG 0.424046 8_2:+31697830 None:intergenic
AATGATATAAACAACTCTTT+CGG 0.432683 8_2:-31698903 Msa1244090:CDS
ATAAACAACTCTTTCGGAAA+AGG 0.432713 8_2:-31698897 Msa1244090:CDS
TCGTATGTGAAAAGCTTGTT+TGG 0.444340 8_2:+31690453 None:intergenic
ATCAGTTTACATGAACATAA+TGG 0.447039 8_2:+31690244 None:intergenic
CAAGCTTTGCGTAAGATGTC+TGG 0.449604 8_2:-31697669 Msa1244090:CDS
AAAGGTAGTGTTACGAGATT+GGG 0.449775 8_2:-31698879 Msa1244090:CDS
AAAGAGTGGAACTTCTTGAT+AGG 0.452809 8_2:+31703074 None:intergenic
TGACGCTCGCTTCGTTGATA+GGG 0.457665 8_2:-31702970 Msa1244090:intron
TCTATTCCAGCAAAAGGCTC+TGG 0.457882 8_2:-31698937 Msa1244090:intron
AGTTCAACCGATTGCATCAC+TGG 0.459923 8_2:+31690138 None:intergenic
TTACATGAACATAATGGAAC+AGG 0.463629 8_2:+31690250 None:intergenic
AGAGCCATCTCTCCATGATC+TGG 0.469294 8_2:+31698045 None:intergenic
GACATGTTTAGAAGAAGAAG+AGG 0.470961 8_2:+31703034 None:intergenic
CTGCAATAGCATGAAGTGCT+AGG 0.471959 8_2:+31698283 None:intergenic
TTGATTTCTGTTTAGGCCAA+AGG 0.483456 8_2:-31697176 Msa1244090:intron
CTTTGGTCGGGTAGTCGGAC+TGG 0.483764 8_2:-31690098 Msa1244090:three_prime_UTR
CAGACATCTTACGCAAAGCT+TGG 0.486162 8_2:+31697670 None:intergenic
GTCTAAAGCCAAACATCCAC+TGG 0.486365 8_2:+31698663 None:intergenic
GGTGATTAAACTGATGCCTT+TGG 0.487078 8_2:-31690115 Msa1244090:three_prime_UTR
GCAGATCGTATGTGTAGATC+TGG 0.491077 8_2:-31697897 Msa1244090:CDS
TTAGGTGGTGGTCTTCCAAA+AGG 0.491192 8_2:-31698634 Msa1244090:CDS
AAATTGATATGCAGGTAGTT+CGG 0.498228 8_2:-31690499 Msa1244090:intron
GCTTTAGACTTTGCTTTAGG+TGG 0.499082 8_2:-31698649 Msa1244090:CDS
TTAAACTGATGCCTTTGGTC+GGG 0.504118 8_2:-31690110 Msa1244090:three_prime_UTR
GTTTATGTCATGCAGAAGCT+AGG 0.506088 8_2:-31698162 Msa1244090:intron
TCATGCTATTGCAGAAGTAC+AGG 0.512089 8_2:-31698274 Msa1244090:intron
ATCGTGTGCCAACCAGATCA+TGG 0.514896 8_2:-31698057 Msa1244090:CDS
GAAGAAGAGGAAGCAAAGAG+AGG 0.515096 8_2:+31703047 None:intergenic
AGTGATGCAATCGGTTGAAC+TGG 0.524177 8_2:-31690136 Msa1244090:three_prime_UTR
AAGGTAAAATTGAAATTCAA+AGG 0.526847 8_2:-31690194 Msa1244090:three_prime_UTR
TTCGATATTTCATTTGGAGA+GGG 0.528629 8_2:-31694866 Msa1244090:CDS
TGTTCACTTCAACTTCTGCT+CGG 0.531981 8_2:+31697829 None:intergenic
GAGATTGGAATGCAGCAAAT+GGG 0.536381 8_2:-31697714 Msa1244090:CDS
GATGCCTTTGGTCGGGTAGT+CGG 0.537020 8_2:-31690103 Msa1244090:three_prime_UTR
CAAAGAGAGGAGGCAAAGAG+TGG 0.537991 8_2:+31703060 None:intergenic
TCAAATATATCTTCGTCTTG+AGG 0.538183 8_2:+31690413 None:intergenic
GTTCGGTCTTCAATGAATGA+TGG 0.538565 8_2:-31690482 Msa1244090:CDS
TCTTCGTCTTGAGGAAGCAC+TGG 0.538932 8_2:+31690422 None:intergenic
TCTGGAAATGCCTCTAAAGC+TGG 0.543928 8_2:-31697651 Msa1244090:CDS
GTTACGAGATTGGGCAGTGC+TGG 0.546984 8_2:-31698870 Msa1244090:CDS
TCGGGGAGTGAGAGCTGAGA+CGG 0.547108 8_2:+31697848 None:intergenic
CGCCATAGATCTCATTTGCG+TGG 0.560134 8_2:-31697874 Msa1244090:CDS
ATTCGATATTTCATTTGGAG+AGG 0.562710 8_2:-31694867 Msa1244090:CDS
TGCAATAGCATGAAGTGCTA+GGG 0.565048 8_2:+31698284 None:intergenic
GCCAAAGGAGATGAAGAAGT+TGG 0.567990 8_2:-31697161 Msa1244090:CDS
ATTAAACTGATGCCTTTGGT+CGG 0.568117 8_2:-31690111 Msa1244090:three_prime_UTR
TTCACTTCAACTTCTGCTCG+GGG 0.573704 8_2:+31697831 None:intergenic
CCAACCAGATCATGGAGAGA+TGG 0.574272 8_2:-31698049 Msa1244090:CDS
CCTACCGCTTTAGAATATGC+TGG 0.575256 8_2:+31698099 None:intergenic
GGTCGAACCAGTGATGCAAT+CGG 0.576844 8_2:-31690145 Msa1244090:three_prime_UTR
GAAGAGGAAGCAAAGAGAGG+AGG 0.578878 8_2:+31703050 None:intergenic
CCATCTCTCCATGATCTGGT+TGG 0.583917 8_2:+31698049 None:intergenic
ACGAGATTGGGCAGTGCTGG+TGG 0.586767 8_2:-31698867 Msa1244090:CDS
AATCCAGAAGTGACAAGTGG+TGG 0.590086 8_2:-31697439 Msa1244090:CDS
TGGAGAGGGAGTCAATAAGC+TGG 0.603916 8_2:-31694852 Msa1244090:intron
CCAGCATATTCTAAAGCGGT+AGG 0.611416 8_2:-31698099 Msa1244090:CDS
TGCTCTGAGAATGAAAGTGT+GGG 0.611616 8_2:+31703130 None:intergenic
TGTAAGAGTGCAAAAGAGCA+AGG 0.621297 8_2:-31697126 Msa1244090:intron
TGATCCAGCATATTCTAAAG+CGG 0.621566 8_2:-31698103 Msa1244090:CDS
AATAGCATGAAGTGCTAGGG+TGG 0.629963 8_2:+31698287 None:intergenic
TCCAAAAGGAAGAATTGTAG+AGG 0.632337 8_2:-31698620 Msa1244090:intron
GTGCTCTGAGAATGAAAGTG+TGG 0.635491 8_2:+31703129 None:intergenic
TATTTGGACCAGAAAGCAGT+GGG 0.635930 8_2:-31698314 Msa1244090:CDS
AAGATTCAATGCGAACTCAA+CGG 0.646437 8_2:-31703011 Msa1244090:CDS
ATATTCTAAAGCGGTAGGAG+TGG 0.652399 8_2:-31698094 Msa1244090:CDS
CAGTCCGACTACCCGACCAA+AGG 0.653290 8_2:+31690099 None:intergenic
TATGTCATGCAGAAGCTAGG+AGG 0.653728 8_2:-31698159 Msa1244090:intron
TCTAAAGCCAAACATCCACT+GGG 0.679556 8_2:+31698664 None:intergenic
GGAAATCCAGAAGTGACAAG+TGG 0.683852 8_2:-31697442 Msa1244090:CDS
GAAGCGAGCGTCAAAATCAG+CGG 0.686232 8_2:+31702980 None:intergenic
ATATTTGGACCAGAAAGCAG+TGG 0.688023 8_2:-31698315 Msa1244090:CDS
TTTGAAGAAAGTCTGTGACG+AGG 0.731789 8_2:-31690395 Msa1244090:exon
GCTCTGAGAATGAAAGTGTG+GGG 0.765268 8_2:+31703131 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAATAACACTAATATTAAT+AGG + chr8_2:31690932-31690951 None:intergenic 10.0%
!! TTAATAACACTAATATTAAT+AGG + chr8_2:31690932-31690951 None:intergenic 10.0%
!!! TTTATAAAATTTTGTCTAAA+TGG - chr8_2:31693891-31693910 Msa1244090:intron 10.0%
!!! ATATATATGTAATTTTTTTG+GGG - chr8_2:31694076-31694095 Msa1244090:intron 10.0%
!!! GTACTTTTATTATATAATTT+AGG - chr8_2:31695601-31695620 Msa1244090:intron 10.0%
!!! ACTTTTATTATATAATTTAG+GGG - chr8_2:31695603-31695622 Msa1244090:intron 10.0%
!!! ATTATTTATAAGAGAATTTT+TGG - chr8_2:31697141-31697160 Msa1244090:CDS 10.0%
!!! TTTAACATTTTCTTATAAAT+TGG + chr8_2:31697168-31697187 None:intergenic 10.0%
!! TTTAACAAAAAAAAAAGATT+TGG - chr8_2:31698141-31698160 Msa1244090:CDS 10.0%
!! AAAATGAAAATTCAAAATAA+TGG + chr8_2:31698599-31698618 None:intergenic 10.0%
!! ATAATAATAACTAAGTATTA+TGG - chr8_2:31699605-31699624 Msa1244090:intron 10.0%
!!! AATAATAAATACTTTTGAAA+TGG + chr8_2:31699896-31699915 None:intergenic 10.0%
!! TTAAAAAGTAATGTTTATAT+AGG + chr8_2:31701640-31701659 None:intergenic 10.0%
!!! TATCTTGTTATTTTGAAAAA+TGG - chr8_2:31690206-31690225 Msa1244090:three_prime_UTR 15.0%
!! ATCGTATAACTTAATAATTT+AGG + chr8_2:31691270-31691289 None:intergenic 15.0%
!! ATCGTATAACTTAATAATTT+AGG + chr8_2:31691270-31691289 None:intergenic 15.0%
!!! TCATTCTTTTTTATTTTTTC+TGG - chr8_2:31692901-31692920 Msa1244090:intron 15.0%
!! TACAGTAAAAAAACTATTTA+GGG + chr8_2:31693282-31693301 None:intergenic 15.0%
!! ATACAGTAAAAAAACTATTT+AGG + chr8_2:31693283-31693302 None:intergenic 15.0%
!!! TTAGACAAAATTTTATAAAG+CGG + chr8_2:31693890-31693909 None:intergenic 15.0%
!!! TTGTTGTTTGTTATATAATT+TGG - chr8_2:31693935-31693954 Msa1244090:intron 15.0%
!! AAATAACCTACTATATTTAT+TGG + chr8_2:31694367-31694386 None:intergenic 15.0%
!!! TTATTTGTTACATTGTTAAT+GGG - chr8_2:31694381-31694400 Msa1244090:intron 15.0%
!!! ATAAATTGATAATTATCATC+AGG + chr8_2:31695167-31695186 None:intergenic 15.0%
!! TATTGTAATCAAAAGATATT+AGG + chr8_2:31696152-31696171 None:intergenic 15.0%
!! AATTTATAAAACTTGTAGTA+AGG - chr8_2:31696373-31696392 Msa1244090:intron 15.0%
!! TATAAATAAGTTTATAAGGT+GGG + chr8_2:31696431-31696450 None:intergenic 15.0%
!! GAGAAGAATAAAAATAATTA+TGG - chr8_2:31696616-31696635 Msa1244090:intron 15.0%
!! TTTACTATTTACTTAGAATT+AGG + chr8_2:31697040-31697059 None:intergenic 15.0%
!! TCTAAGTAAATAGTAAAATT+AGG - chr8_2:31697043-31697062 Msa1244090:intron 15.0%
!! AATTAGTAGTATAGAAATTA+AGG - chr8_2:31697083-31697102 Msa1244090:intron 15.0%
!! AATTCTCTTATAAATAATAC+CGG + chr8_2:31697139-31697158 None:intergenic 15.0%
!!! TATTATTTTGAAAAGACTTT+AGG - chr8_2:31698174-31698193 Msa1244090:intron 15.0%
!!! ATTATTTTGAAAAGACTTTA+GGG - chr8_2:31698175-31698194 Msa1244090:intron 15.0%
!!! TTTGTCTTAATTTTTTTTTG+TGG - chr8_2:31698439-31698458 Msa1244090:intron 15.0%
!! TCCTAAATAAATTGAAAATT+AGG - chr8_2:31699573-31699592 Msa1244090:intron 15.0%
!!! TCCTAATTTTCAATTTATTT+AGG + chr8_2:31699577-31699596 None:intergenic 15.0%
!!! TGTGGATTTTTTATAAAATA+AGG + chr8_2:31699921-31699940 None:intergenic 15.0%
!! ATAAAATACTGAAACAATAT+TGG + chr8_2:31700536-31700555 None:intergenic 15.0%
!!! ATATTTTGTTACTTTTATTG+AGG + chr8_2:31700920-31700939 None:intergenic 15.0%
!!! TAACAAAAACTTTTGAAATA+TGG + chr8_2:31701376-31701395 None:intergenic 15.0%
!!! GTTATTTTGAAAAATGGATT+TGG - chr8_2:31690212-31690231 Msa1244090:three_prime_UTR 20.0%
!! AGAAAATTAAAAGAGAAAAG+GGG + chr8_2:31690446-31690465 None:intergenic 20.0%
!! CAGAAAATTAAAAGAGAAAA+GGG + chr8_2:31690447-31690466 None:intergenic 20.0%
!! TGAGAAATAAAGTAGATTTA+AGG - chr8_2:31690826-31690845 Msa1244090:intron 20.0%
!! GAGAAATAAAGTAGATTTAA+GGG - chr8_2:31690827-31690846 Msa1244090:intron 20.0%
!! AACACTAATATTAATAGGAA+AGG + chr8_2:31690927-31690946 None:intergenic 20.0%
!!! GTCAATTGTTTCTTATAATA+AGG + chr8_2:31690993-31691012 None:intergenic 20.0%
!!! TAAGAAACAATTGACTTTTT+TGG - chr8_2:31690998-31691017 Msa1244090:intron 20.0%
!!! TAAGAAAAAGTTGACTTTTT+AGG + chr8_2:31691087-31691106 None:intergenic 20.0%
!!! GTCAACTTTTTCTTATAATA+AGG - chr8_2:31691092-31691111 Msa1244090:intron 20.0%
!!! CTTACTGTATTTTTTATTAG+AGG + chr8_2:31691415-31691434 None:intergenic 20.0%
!! TGAGAAATAAAGTAGATTTA+AGG - chr8_2:31690826-31690845 Msa1244090:intron 20.0%
!! GAGAAATAAAGTAGATTTAA+GGG - chr8_2:31690827-31690846 Msa1244090:intron 20.0%
!! AACACTAATATTAATAGGAA+AGG + chr8_2:31690927-31690946 None:intergenic 20.0%
!!! GTCAATTGTTTCTTATAATA+AGG + chr8_2:31690993-31691012 None:intergenic 20.0%
!!! TAAGAAACAATTGACTTTTT+TGG - chr8_2:31690998-31691017 Msa1244090:intron 20.0%
!!! TAAGAAAAAGTTGACTTTTT+AGG + chr8_2:31691087-31691106 None:intergenic 20.0%
!!! GTCAACTTTTTCTTATAATA+AGG - chr8_2:31691092-31691111 Msa1244090:intron 20.0%
!!! CTTACTGTATTTTTTATTAG+AGG + chr8_2:31691415-31691434 None:intergenic 20.0%
!! AATGACAGATTAAAAATTTG+GGG + chr8_2:31692886-31692905 None:intergenic 20.0%
!! GAATGACAGATTAAAAATTT+GGG + chr8_2:31692887-31692906 None:intergenic 20.0%
!! AGAATGACAGATTAAAAATT+TGG + chr8_2:31692888-31692907 None:intergenic 20.0%
!! ATAGATGATACAATTTAAGT+TGG - chr8_2:31692973-31692992 Msa1244090:intron 20.0%
!!! CTTTCTATTTATTTCTTCTA+GGG + chr8_2:31693004-31693023 None:intergenic 20.0%
!!! ACTTTCTATTTATTTCTTCT+AGG + chr8_2:31693005-31693024 None:intergenic 20.0%
!! ATGAAATTAAGAAATGCTAT+AGG - chr8_2:31693227-31693246 Msa1244090:intron 20.0%
!!! GTTTTTTTTAATGGCAAATT+AGG - chr8_2:31693517-31693536 Msa1244090:intron 20.0%
!! AGTTCTCATTATAAAGAAAA+TGG - chr8_2:31693569-31693588 Msa1244090:intron 20.0%
!!! TAGACAAAATTTTATAAAGC+GGG + chr8_2:31693889-31693908 None:intergenic 20.0%
!! AACAAACAACAAATAATGAA+GGG + chr8_2:31693927-31693946 None:intergenic 20.0%
!! TAACAAACAACAAATAATGA+AGG + chr8_2:31693928-31693947 None:intergenic 20.0%
!!! TGTTTGTTATATAATTTGGT+TGG - chr8_2:31693939-31693958 Msa1244090:intron 20.0%
!!! AATTTTAATTATTGCTCTAC+TGG - chr8_2:31694245-31694264 Msa1244090:intron 20.0%
!!! GTTATTTGTTACATTGTTAA+TGG - chr8_2:31694380-31694399 Msa1244090:intron 20.0%
!! AATGATATAAACAACTCTTT+CGG - chr8_2:31694480-31694499 Msa1244090:intron 20.0%
!! TCAAACTATATAAAACAGTT+TGG + chr8_2:31694606-31694625 None:intergenic 20.0%
!!! TTCTAAGCAAAATGATTTTA+GGG - chr8_2:31694902-31694921 Msa1244090:intron 20.0%
!! ATTGAAGTATAAATAAGTAG+AGG + chr8_2:31695013-31695032 None:intergenic 20.0%
!! TCTACTTATTTATACTTCAA+TGG - chr8_2:31695012-31695031 Msa1244090:intron 20.0%
!! CTACTTATTTATACTTCAAT+GGG - chr8_2:31695013-31695032 Msa1244090:intron 20.0%
!! TTCAGATATATAAAATACTG+TGG + chr8_2:31696286-31696305 None:intergenic 20.0%
!! GATGAAAAAAATAACACAAA+AGG + chr8_2:31696315-31696334 None:intergenic 20.0%
!! AAAAATTCATGAATAATGCA+TGG + chr8_2:31696340-31696359 None:intergenic 20.0%
!! ATAAATAAGTTTATAAGGTG+GGG + chr8_2:31696430-31696449 None:intergenic 20.0%
!! CTATAAATAAGTTTATAAGG+TGG + chr8_2:31696432-31696451 None:intergenic 20.0%
!! CACCTTATAAACTTATTTAT+AGG - chr8_2:31696430-31696449 Msa1244090:intron 20.0%
!! ACTTATATACCTATAAATAG+GGG + chr8_2:31697015-31697034 None:intergenic 20.0%
!! GACTTATATACCTATAAATA+GGG + chr8_2:31697016-31697035 None:intergenic 20.0%
!! AGACTTATATACCTATAAAT+AGG + chr8_2:31697017-31697036 None:intergenic 20.0%
!!! AGAAAATGTTAAAGCTTTTA+AGG - chr8_2:31697175-31697194 Msa1244090:intron 20.0%
!! AAACCAAACAAAAATGATAT+TGG - chr8_2:31697567-31697586 Msa1244090:intron 20.0%
!! AACCAAACAAAAATGATATT+GGG - chr8_2:31697568-31697587 Msa1244090:intron 20.0%
!!! AAAAAAAAAAGATTTGGTTG+AGG - chr8_2:31698147-31698166 Msa1244090:CDS 20.0%
!!! TTTTTGAGTTTACATAAAAC+TGG + chr8_2:31698239-31698258 None:intergenic 20.0%
!!! ATTTTCAAAAGCTAAAACAA+GGG - chr8_2:31698290-31698309 Msa1244090:CDS 20.0%
!! TACAACAATTATATCTGATT+CGG + chr8_2:31698413-31698432 None:intergenic 20.0%
!! ATGAATATTGTCTTAAAGAA+GGG - chr8_2:31698654-31698673 Msa1244090:CDS 20.0%
!! CAATTATGATAATAAATCTG+TGG - chr8_2:31699004-31699023 Msa1244090:intron 20.0%
!! TAAAAATGAAAACTACTCTT+AGG + chr8_2:31699737-31699756 None:intergenic 20.0%
!!! AGTCTTGTATATCTATAAAT+AGG - chr8_2:31699806-31699825 Msa1244090:intron 20.0%
!! GTCTTGTATATCTATAAATA+GGG - chr8_2:31699807-31699826 Msa1244090:intron 20.0%
!! TCTTGTATATCTATAAATAG+GGG - chr8_2:31699808-31699827 Msa1244090:intron 20.0%
!! TAGGAAAATTAACAATTAAC+TGG + chr8_2:31700708-31700727 None:intergenic 20.0%
!! TCACACTATTGTAATTATAA+TGG + chr8_2:31700780-31700799 None:intergenic 20.0%
!!! ATAGAGTTTGTATGATATTT+TGG + chr8_2:31700828-31700847 None:intergenic 20.0%
!! AAAATATCATACAAACTCTA+TGG - chr8_2:31700827-31700846 Msa1244090:intron 20.0%
!!! TTTGTTCTTGATATGTTTTT+GGG - chr8_2:31701117-31701136 Msa1244090:intron 20.0%
!!! TTTCTAGAGAAAATATAACT+CGG + chr8_2:31701153-31701172 None:intergenic 20.0%
!!! AGTTATATTTTCTCTAGAAA+GGG - chr8_2:31701153-31701172 Msa1244090:intron 20.0%
!! AAAGTAATGTTTATATAGGT+GGG + chr8_2:31701636-31701655 None:intergenic 20.0%
!! AAAAGTAATGTTTATATAGG+TGG + chr8_2:31701637-31701656 None:intergenic 20.0%
!! TAAAGATTACTAATGAATGA+AGG - chr8_2:31701782-31701801 Msa1244090:intron 20.0%
!! AAAAGATTAAATTGATATGC+AGG - chr8_2:31702876-31702895 Msa1244090:intron 20.0%
!!! TTGATTTTTCTGATAAGTTT+GGG - chr8_2:31703014-31703033 Msa1244090:CDS 20.0%
!! TATTCTTTCTTCAACATAAA+TGG - chr8_2:31703067-31703086 Msa1244090:CDS 20.0%
!! AAGGTAAAATTGAAATTCAA+AGG - chr8_2:31703189-31703208 Msa1244090:five_prime_UTR 20.0%
! GCAGAAAATTAAAAGAGAAA+AGG + chr8_2:31690448-31690467 None:intergenic 25.0%
!! TATGAACAGTTTTACTAGTT+TGG - chr8_2:31690537-31690556 Msa1244090:intron 25.0%
!!! TATTAATAGGAAAGGCATTT+TGG + chr8_2:31690919-31690938 None:intergenic 25.0%
!! TTGTTTCTTATAATAAGGAC+CGG + chr8_2:31690988-31691007 None:intergenic 25.0%
!! CTTTTTCTTATAATAAGGAC+CGG - chr8_2:31691097-31691116 Msa1244090:intron 25.0%
! AAAAGAAATTGGAAAAGTTG+AGG + chr8_2:31691321-31691340 None:intergenic 25.0%
!!! ACTGTATTTTTTATTAGAGG+AGG + chr8_2:31691412-31691431 None:intergenic 25.0%
!! ACAGTAAGATTCTTTTCAAT+TGG - chr8_2:31691427-31691446 Msa1244090:intron 25.0%
!! CAGTAAGATTCTTTTCAATT+GGG - chr8_2:31691428-31691447 Msa1244090:intron 25.0%
! ATGATAAAATTTCTTCAGCT+GGG - chr8_2:31691482-31691501 Msa1244090:intron 25.0%
! TGCCAAAAAAATAGAAAAGA+TGG - chr8_2:31691508-31691527 Msa1244090:intron 25.0%
!!! CACCATCTTTTCTATTTTTT+TGG + chr8_2:31691513-31691532 None:intergenic 25.0%
!!! TATTAATAGGAAAGGCATTT+TGG + chr8_2:31690919-31690938 None:intergenic 25.0%
!! TTGTTTCTTATAATAAGGAC+CGG + chr8_2:31690988-31691007 None:intergenic 25.0%
!! CTTTTTCTTATAATAAGGAC+CGG - chr8_2:31691097-31691116 Msa1244090:intron 25.0%
! AAAAGAAATTGGAAAAGTTG+AGG + chr8_2:31691321-31691340 None:intergenic 25.0%
!!! ACTGTATTTTTTATTAGAGG+AGG + chr8_2:31691412-31691431 None:intergenic 25.0%
!! ACAGTAAGATTCTTTTCAAT+TGG - chr8_2:31691427-31691446 Msa1244090:intron 25.0%
!! CAGTAAGATTCTTTTCAATT+GGG - chr8_2:31691428-31691447 Msa1244090:intron 25.0%
! ATGATAAAATTTCTTCAGCT+GGG - chr8_2:31691482-31691501 Msa1244090:intron 25.0%
! TGCCAAAAAAATAGAAAAGA+TGG - chr8_2:31691508-31691527 Msa1244090:intron 25.0%
!!! CACCATCTTTTCTATTTTTT+TGG + chr8_2:31691513-31691532 None:intergenic 25.0%
! TACTGAATATATACAAGAGA+AGG - chr8_2:31692930-31692949 Msa1244090:intron 25.0%
! ACACACAAATCATATATTAG+AGG - chr8_2:31693090-31693109 Msa1244090:intron 25.0%
! TTGAGAAAAATGTTAACCAT+AGG - chr8_2:31693189-31693208 Msa1244090:intron 25.0%
!! TTTTACTGTATACACCAAAA+TGG - chr8_2:31693292-31693311 Msa1244090:intron 25.0%
! AGCCTTACAACTATAAAAAA+GGG + chr8_2:31693370-31693389 None:intergenic 25.0%
! AAGCCTTACAACTATAAAAA+AGG + chr8_2:31693371-31693390 None:intergenic 25.0%
!! TAATTTCATTTTGTCTACTG+TGG + chr8_2:31693489-31693508 None:intergenic 25.0%
! ACAGTAGACAAAATGAAATT+AGG - chr8_2:31693488-31693507 Msa1244090:intron 25.0%
!!! AGGAGTGTTGTTTTTTTTAA+TGG - chr8_2:31693508-31693527 Msa1244090:intron 25.0%
!!! GTTGTTATTTGAGAAAAAGT+CGG - chr8_2:31693543-31693562 Msa1244090:intron 25.0%
!!! TTGTTATTTGAGAAAAAGTC+GGG - chr8_2:31693544-31693563 Msa1244090:intron 25.0%
! ATAAAATACTTAGCGAAAGA+GGG - chr8_2:31693673-31693692 Msa1244090:intron 25.0%
!! TAATTCTAGATCTCTTTTGA+TGG + chr8_2:31693719-31693738 None:intergenic 25.0%
!! TTTTGTCTAAATGGAATCTT+TGG - chr8_2:31693900-31693919 Msa1244090:intron 25.0%
!! TATAATTTGGTTGGTCAATA+CGG - chr8_2:31693948-31693967 Msa1244090:intron 25.0%
! ATATGTAATCATATGACAGA+AGG + chr8_2:31693975-31693994 None:intergenic 25.0%
!! ATGTGCATATGATAATTTTG+TGG - chr8_2:31694051-31694070 Msa1244090:intron 25.0%
!!! AATTTTTTTGGGGATCAATT+TGG - chr8_2:31694086-31694105 Msa1244090:intron 25.0%
! ATACATTACGAATATAAACG+AGG + chr8_2:31694147-31694166 None:intergenic 25.0%
! GGAAAAAACAAAAGATGATA+TGG + chr8_2:31694182-31694201 None:intergenic 25.0%
!!! GTTCAATGTTTGTTATGAAA+TGG - chr8_2:31694301-31694320 Msa1244090:intron 25.0%
! AGTATGCCAATAAATATAGT+AGG - chr8_2:31694358-31694377 Msa1244090:intron 25.0%
!! ATATTGTGCTTAAGCTTTAT+TGG - chr8_2:31694840-31694859 Msa1244090:intron 25.0%
!! CTAAAATCATTTTGCTTAGA+AGG + chr8_2:31694903-31694922 None:intergenic 25.0%
!! CTTCTAAGCAAAATGATTTT+AGG - chr8_2:31694901-31694920 Msa1244090:intron 25.0%
!! TCTAAGCAAAATGATTTTAG+GGG - chr8_2:31694903-31694922 Msa1244090:intron 25.0%
! TATATCTGTTTCCAGATATT+TGG - chr8_2:31695053-31695072 Msa1244090:intron 25.0%
! ATCATCAGGAATTAATGATT+GGG + chr8_2:31695153-31695172 None:intergenic 25.0%
! TATCATCAGGAATTAATGAT+TGG + chr8_2:31695154-31695173 None:intergenic 25.0%
! TGGAATGGATAAGATAATTT+AGG - chr8_2:31695392-31695411 Msa1244090:intron 25.0%
! AATGGATAAGATAATTTAGG+CGG - chr8_2:31695395-31695414 Msa1244090:intron 25.0%
!!! TGTCTTTCTTTGTTTGTTTT+AGG - chr8_2:31695579-31695598 Msa1244090:intron 25.0%
! TCTGAACCAAATAAGATATA+AGG - chr8_2:31695770-31695789 Msa1244090:intron 25.0%
! CAAGTACCTTATATCTTATT+TGG + chr8_2:31695779-31695798 None:intergenic 25.0%
!!! TTCTCTTTACTTTTGTAGAT+TGG - chr8_2:31695908-31695927 Msa1244090:intron 25.0%
!!! TGTAAAAAGTGCTGATATTT+TGG + chr8_2:31696111-31696130 None:intergenic 25.0%
!!! GTTTAATTTGAAGAACTACT+CGG - chr8_2:31696180-31696199 Msa1244090:intron 25.0%
! GGCCTATAAATAAGTTTATA+AGG + chr8_2:31696435-31696454 None:intergenic 25.0%
! TGATACTATGTTGAAGTTAT+GGG - chr8_2:31696577-31696596 Msa1244090:intron 25.0%
!! TTTTCTCTCTTTATTCAACA+TGG - chr8_2:31696860-31696879 Msa1244090:intron 25.0%
! AAAAGACAACGTATTAAATG+AGG + chr8_2:31697231-31697250 None:intergenic 25.0%
!!! GTTGTCTTTTTCATATTACT+GGG - chr8_2:31697241-31697260 Msa1244090:intron 25.0%
! AAAACAATAAATGAGCTCAT+AGG - chr8_2:31697314-31697333 Msa1244090:intron 25.0%
! TTATCTCTAATAATTGAGAC+CGG - chr8_2:31697348-31697367 Msa1244090:intron 25.0%
! TAGACATATACTTTCAAAAG+AGG - chr8_2:31697457-31697476 Msa1244090:CDS 25.0%
! AAGACAAACATATAGTCATT+TGG - chr8_2:31697833-31697852 Msa1244090:intron 25.0%
!! TTTTGTACTTTATCCTCTAA+AGG - chr8_2:31697966-31697985 Msa1244090:intron 25.0%
! TTTGTACTTTATCCTCTAAA+GGG - chr8_2:31697967-31697986 Msa1244090:intron 25.0%
! AGAAAAAAGCTGAAACAATA+AGG + chr8_2:31698077-31698096 None:intergenic 25.0%
!!! AAATCATTTTTGACAACTGA+TGG - chr8_2:31698104-31698123 Msa1244090:CDS 25.0%
!!! CTTTTGAAAATGTGATTTCA+AGG + chr8_2:31698281-31698300 None:intergenic 25.0%
!! CATTTTCAAAAGCTAAAACA+AGG - chr8_2:31698289-31698308 Msa1244090:CDS 25.0%
! ACAACAATTATATCTGATTC+GGG + chr8_2:31698412-31698431 None:intergenic 25.0%
!!! GTCTTAATTTTTTTTTGTGG+AGG - chr8_2:31698442-31698461 Msa1244090:intron 25.0%
! TCCAAATGAAATATCGAATT+CGG + chr8_2:31698515-31698534 None:intergenic 25.0%
!! TGAATTTTCATTTTGAATGC+AGG - chr8_2:31698605-31698624 Msa1244090:intron 25.0%
!! GAATTTTCATTTTGAATGCA+GGG - chr8_2:31698606-31698625 Msa1244090:intron 25.0%
! GATGAATATTGTCTTAAAGA+AGG - chr8_2:31698653-31698672 Msa1244090:CDS 25.0%
!!! TATGCAGTTTTATAATCTGT+CGG - chr8_2:31698858-31698877 Msa1244090:CDS 25.0%
! TGATTACTGTAATTGATCAT+TGG + chr8_2:31698906-31698925 None:intergenic 25.0%
! CAATTACAGTAATCATTCAT+TGG - chr8_2:31698911-31698930 Msa1244090:CDS 25.0%
! ATTATTGTAGTTGCATGATA+TGG - chr8_2:31699095-31699114 Msa1244090:intron 25.0%
! AACAGAATAAAAAAGAAACG+CGG + chr8_2:31699237-31699256 None:intergenic 25.0%
! ACGAAGCAAATCATAATAAT+AGG + chr8_2:31699760-31699779 None:intergenic 25.0%
!! TCCTCTATTTATTTAGGATT+AGG - chr8_2:31699783-31699802 Msa1244090:intron 25.0%
! TCCTAATCCTAAATAAATAG+AGG + chr8_2:31699787-31699806 None:intergenic 25.0%
!!! GACATTTTTTACCTTTGTTT+CGG - chr8_2:31700113-31700132 Msa1244090:intron 25.0%
! ACAACACATATACAACTATT+GGG + chr8_2:31700254-31700273 None:intergenic 25.0%
! AACAACACATATACAACTAT+TGG + chr8_2:31700255-31700274 None:intergenic 25.0%
! AATAGTTGTATATGTGTTGT+TGG - chr8_2:31700254-31700273 Msa1244090:intron 25.0%
!! ATAGTTGTATATGTGTTGTT+GGG - chr8_2:31700255-31700274 Msa1244090:intron 25.0%
! CACATGAAAATTATACAACA+GGG + chr8_2:31700353-31700372 None:intergenic 25.0%
! AGAATTAGAATGATAAACTG+AGG + chr8_2:31700429-31700448 None:intergenic 25.0%
! ACAGATTCTTAATTCTAACA+AGG + chr8_2:31700685-31700704 None:intergenic 25.0%
! CATTGAATAAACATTAACCT+AGG + chr8_2:31700745-31700764 None:intergenic 25.0%
!! GTTTGTTCTTGATATGTTTT+TGG - chr8_2:31701116-31701135 Msa1244090:intron 25.0%
!!! GAGTTATATTTTCTCTAGAA+AGG - chr8_2:31701152-31701171 Msa1244090:intron 25.0%
! TATATGGAAGTAGACAATTT+AGG + chr8_2:31701279-31701298 None:intergenic 25.0%
! AATACTAACTCCAAGTTATA+TGG + chr8_2:31701295-31701314 None:intergenic 25.0%
!!! GTTTTTGTTATTTCTCTTCT+TGG - chr8_2:31701386-31701405 Msa1244090:intron 25.0%
! AAGTAATGTTTATATAGGTG+GGG + chr8_2:31701635-31701654 None:intergenic 25.0%
! CAGATTATAGTGTAATTGTT+AGG - chr8_2:31701682-31701701 Msa1244090:intron 25.0%
!! TTCTAGTTAGAATTATTCCT+TGG + chr8_2:31701762-31701781 None:intergenic 25.0%
!!! AGTAAGTTGATAAGATTGTT+AGG + chr8_2:31702018-31702037 None:intergenic 25.0%
! ATTAATGAAATACGAGTTTC+TGG + chr8_2:31702074-31702093 None:intergenic 25.0%
!! TTTAGTCAATTTTGCCTTTT+TGG - chr8_2:31702245-31702264 Msa1244090:intron 25.0%
!! TACTTGATTTCTTGTTTCTT+TGG - chr8_2:31702431-31702450 Msa1244090:intron 25.0%
!! ACTTGATTTCTTGTTTCTTT+GGG - chr8_2:31702432-31702451 Msa1244090:intron 25.0%
!!! GTTGATTTTTCTGATAAGTT+TGG - chr8_2:31703013-31703032 Msa1244090:CDS 25.0%
! ATCAGTTTACATGAACATAA+TGG + chr8_2:31703142-31703161 None:intergenic 25.0%
! AAGCATAGAAACAAAAAGAA+AGG - chr8_2:31703170-31703189 Msa1244090:exon 25.0%
AATTGTGTTGTGAAAGAAAC+AGG + chr8_2:31690112-31690131 None:intergenic 30.0%
! GTTTCTTTTTCTCGAATTGA+TGG - chr8_2:31690582-31690601 Msa1244090:intron 30.0%
TCTTTACGAGAAAGTGAATT+AGG + chr8_2:31690621-31690640 None:intergenic 30.0%
AGAATGCAAGACTTAAATCA+GGG - chr8_2:31690685-31690704 Msa1244090:intron 30.0%
AGTAGATTTAAGGGATTGTT+TGG - chr8_2:31690836-31690855 Msa1244090:intron 30.0%
! TTTTACATAATTACTCCCTC+CGG - chr8_2:31690966-31690985 Msa1244090:intron 30.0%
GAGAAGTAGGAAAAAGAAAT+TGG + chr8_2:31691332-31691351 None:intergenic 30.0%
!!! AATTTGTTCTTTTGGGGTTA+TGG + chr8_2:31691380-31691399 None:intergenic 30.0%
!! ATGGTGAATTTGTTCTTTTG+GGG + chr8_2:31691386-31691405 None:intergenic 30.0%
!! CATGGTGAATTTGTTCTTTT+GGG + chr8_2:31691387-31691406 None:intergenic 30.0%
!! TCATGGTGAATTTGTTCTTT+TGG + chr8_2:31691388-31691407 None:intergenic 30.0%
CATGATAAAATTTCTTCAGC+TGG - chr8_2:31691481-31691500 Msa1244090:intron 30.0%
AAGAGAGACCAAATAATTGT+GGG + chr8_2:31691628-31691647 None:intergenic 30.0%
AGTAGATTTAAGGGATTGTT+TGG - chr8_2:31690836-31690855 Msa1244090:intron 30.0%
! TTTTACATAATTACTCCCTC+CGG - chr8_2:31690966-31690985 Msa1244090:intron 30.0%
GAGAAGTAGGAAAAAGAAAT+TGG + chr8_2:31691332-31691351 None:intergenic 30.0%
!!! AATTTGTTCTTTTGGGGTTA+TGG + chr8_2:31691380-31691399 None:intergenic 30.0%
!! ATGGTGAATTTGTTCTTTTG+GGG + chr8_2:31691386-31691405 None:intergenic 30.0%
!! CATGGTGAATTTGTTCTTTT+GGG + chr8_2:31691387-31691406 None:intergenic 30.0%
!! TCATGGTGAATTTGTTCTTT+TGG + chr8_2:31691388-31691407 None:intergenic 30.0%
CATGATAAAATTTCTTCAGC+TGG - chr8_2:31691481-31691500 Msa1244090:intron 30.0%
AAGAGAGACCAAATAATTGT+GGG + chr8_2:31691628-31691647 None:intergenic 30.0%
AACAGGGATCAATTGTTAAT+CGG - chr8_2:31692775-31692794 Msa1244090:intron 30.0%
! ATTGTTCACATTTTACTCTC+AGG - chr8_2:31692809-31692828 Msa1244090:intron 30.0%
!!! TGCCCTTTTTTATAGTTGTA+AGG - chr8_2:31693365-31693384 Msa1244090:intron 30.0%
GTTGTATGATATTCAATGCT+AGG - chr8_2:31693396-31693415 Msa1244090:intron 30.0%
CGATGAAGAGATAAAAAGAA+AGG - chr8_2:31693419-31693438 Msa1244090:intron 30.0%
GAAGAGATAAAAAGAAAGGA+AGG - chr8_2:31693423-31693442 Msa1244090:intron 30.0%
GATAAAATACTTAGCGAAAG+AGG - chr8_2:31693672-31693691 Msa1244090:intron 30.0%
TATGATTACATATTTCCACG+TGG - chr8_2:31693982-31694001 Msa1244090:intron 30.0%
TGAATTTCTATTCCAGCAAA+AGG - chr8_2:31694440-31694459 Msa1244090:intron 30.0%
ATAAACAACTCTTTCGGAAA+AGG - chr8_2:31694486-31694505 Msa1244090:intron 30.0%
AATAGAAAACCTGTCATGTT+AGG + chr8_2:31694673-31694692 None:intergenic 30.0%
!! GTATGTAACAGTAGTTTGTT+AGG - chr8_2:31694864-31694883 Msa1244090:CDS 30.0%
! ATCATTTTGCTTAGAAGGTT+TGG + chr8_2:31694898-31694917 None:intergenic 30.0%
!! AAATGATTTTAGGGGATGTT+TGG - chr8_2:31694911-31694930 Msa1244090:intron 30.0%
ATTAATGTATAGGGAGAGAT+TGG - chr8_2:31695654-31695673 Msa1244090:intron 30.0%
ACTTGTGATTAAGCAATAGA+TGG + chr8_2:31695835-31695854 None:intergenic 30.0%
AGAAACAAGAGATTTAACTG+TGG + chr8_2:31695871-31695890 None:intergenic 30.0%
!! ATCTCTTGTTTCTGTTTACA+TGG - chr8_2:31695878-31695897 Msa1244090:intron 30.0%
! TTGTAGATTGGTGTCTATTA+TGG - chr8_2:31695920-31695939 Msa1244090:intron 30.0%
GACTAGAAATTCGTTCTATA+GGG - chr8_2:31695996-31696015 Msa1244090:intron 30.0%
GATAAAGTCTGTAAGTACAA+TGG - chr8_2:31696021-31696040 Msa1244090:intron 30.0%
AAGGAAAATTAGCAACAGAA+AGG + chr8_2:31696082-31696101 None:intergenic 30.0%
ATAAAACTTGTAGTAAGGCA+TGG - chr8_2:31696378-31696397 Msa1244090:intron 30.0%
AACTTCAACATAGTATCAGA+GGG + chr8_2:31696575-31696594 None:intergenic 30.0%
TAACTTCAACATAGTATCAG+AGG + chr8_2:31696576-31696595 None:intergenic 30.0%
CTGATACTATGTTGAAGTTA+TGG - chr8_2:31696576-31696595 Msa1244090:intron 30.0%
CTCCTATATAATAAACCTTC+CGG - chr8_2:31696798-31696817 Msa1244090:intron 30.0%
TAACACTAACCCCTATTTAT+AGG - chr8_2:31697003-31697022 Msa1244090:intron 30.0%
! GGGAGTATATTATAGTATCT+TGG + chr8_2:31697114-31697133 None:intergenic 30.0%
TCTTATAAATAATACCGGAG+GGG + chr8_2:31697134-31697153 None:intergenic 30.0%
CTCTTATAAATAATACCGGA+GGG + chr8_2:31697135-31697154 None:intergenic 30.0%
TCTCTTATAAATAATACCGG+AGG + chr8_2:31697136-31697155 None:intergenic 30.0%
!! CGTTGTCTTTTTCATATTAC+TGG - chr8_2:31697240-31697259 Msa1244090:intron 30.0%
! ATGTCTCACAATTTTCCATA+AGG - chr8_2:31697272-31697291 Msa1244090:intron 30.0%
! TGTCTCACAATTTTCCATAA+GGG - chr8_2:31697273-31697292 Msa1244090:intron 30.0%
! GTTTTACACATATACCCTTA+TGG + chr8_2:31697290-31697309 None:intergenic 30.0%
! TTTTTGCTTGAAAGGTCTAT+TGG + chr8_2:31697416-31697435 None:intergenic 30.0%
!! CCTTTAAGTTTTTGCTTGAA+AGG + chr8_2:31697424-31697443 None:intergenic 30.0%
CCTTTCAAGCAAAAACTTAA+AGG - chr8_2:31697421-31697440 Msa1244090:CDS 30.0%
GTTGATTGATTGTTTGTTCT+AGG + chr8_2:31697507-31697526 None:intergenic 30.0%
!! AGCCCAATATCATTTTTGTT+TGG + chr8_2:31697573-31697592 None:intergenic 30.0%
!!! ACTTTTAAGTTGGTTACTTC+AGG + chr8_2:31697610-31697629 None:intergenic 30.0%
TGAAGTAACCAACTTAAAAG+TGG - chr8_2:31697609-31697628 Msa1244090:intron 30.0%
! CTCTCTTAATTTGGTTGTTT+CGG + chr8_2:31697708-31697727 None:intergenic 30.0%
AAACAACCAAATTAAGAGAG+AGG - chr8_2:31697708-31697727 Msa1244090:CDS 30.0%
!! AAATTGACTCCTCTAAAATG+AGG + chr8_2:31697998-31698017 None:intergenic 30.0%
AAACAATCTAGTACAATTCG+AGG + chr8_2:31698023-31698042 None:intergenic 30.0%
!!! GGCATAAGCTATTTTTTGTT+TGG + chr8_2:31698218-31698237 None:intergenic 30.0%
!! CTAACTTGAGAAGTTGTTTT+AGG - chr8_2:31698468-31698487 Msa1244090:intron 30.0%
ATTCGATATTTCATTTGGAG+AGG - chr8_2:31698516-31698535 Msa1244090:intron 30.0%
TTCGATATTTCATTTGGAGA+GGG - chr8_2:31698517-31698536 Msa1244090:intron 30.0%
GAGCTACTGTAAAATTGATT+TGG - chr8_2:31698822-31698841 Msa1244090:intron 30.0%
!! GTAATCATTCATTGGTTCAT+AGG - chr8_2:31698919-31698938 Msa1244090:CDS 30.0%
!! TTGACTTGTAAAGAGAAAGA+CGG - chr8_2:31698961-31698980 Msa1244090:intron 30.0%
CTAATTTGATCTCTGCTATA+TGG + chr8_2:31699035-31699054 None:intergenic 30.0%
TAGCAGAGATCAAATTAGAT+AGG - chr8_2:31699037-31699056 Msa1244090:intron 30.0%
TTGAAATGTAAACAGTGTCT+AGG + chr8_2:31699140-31699159 None:intergenic 30.0%
AATAAAAAAGAAACGCGGAA+GGG + chr8_2:31699232-31699251 None:intergenic 30.0%
CATTGAGACACAAAATGAAA+AGG + chr8_2:31699295-31699314 None:intergenic 30.0%
! CTTTTCATTTTGTGTCTCAA+TGG - chr8_2:31699293-31699312 Msa1244090:intron 30.0%
GATGATCAACATTAAGACAT+GGG + chr8_2:31699346-31699365 None:intergenic 30.0%
GATGATCTTCAAGATAGATT+TGG + chr8_2:31699368-31699387 None:intergenic 30.0%
ATCCAAATCTATCTTGAAAC+AGG - chr8_2:31699385-31699404 Msa1244090:intron 30.0%
AACCTGTTTCAAGATAGATT+TGG + chr8_2:31699390-31699409 None:intergenic 30.0%
AATCTATCTTGAAACAGGTT+AGG - chr8_2:31699390-31699409 Msa1244090:intron 30.0%
! TCTTCTAGAAGAAGTTGAAA+AGG - chr8_2:31699458-31699477 Msa1244090:intron 30.0%
ATAAGTCTATAGCATATAGC+AGG + chr8_2:31699498-31699517 None:intergenic 30.0%
! CACTAACCTCTTATTTATAG+AGG - chr8_2:31699536-31699555 Msa1244090:intron 30.0%
CTTGTACCTCTATAAATAAG+AGG + chr8_2:31699545-31699564 None:intergenic 30.0%
TATTATGGAAACAAAACCCT+AGG - chr8_2:31699620-31699639 Msa1244090:intron 30.0%
!! GTTCTAGAAATTATCTCCTA+GGG + chr8_2:31699639-31699658 None:intergenic 30.0%
!! TGTTCTAGAAATTATCTCCT+AGG + chr8_2:31699640-31699659 None:intergenic 30.0%
AAAAATCCACAACTTCAACA+TGG - chr8_2:31699930-31699949 Msa1244090:intron 30.0%
AAAATCCACAACTTCAACAT+GGG - chr8_2:31699931-31699950 Msa1244090:intron 30.0%
!!! ATTTTTTACCTTTGTTTCGG+TGG - chr8_2:31700116-31700135 Msa1244090:intron 30.0%
CCACATGAAAATTATACAAC+AGG + chr8_2:31700354-31700373 None:intergenic 30.0%
! CCTGTTGTATAATTTTCATG+TGG - chr8_2:31700351-31700370 Msa1244090:intron 30.0%
TAGAATGATAAACTGAGGTT+TGG + chr8_2:31700424-31700443 None:intergenic 30.0%
ATACTGAAACAATATTGGAC+CGG + chr8_2:31700531-31700550 None:intergenic 30.0%
CTAGGAAGTTGTATAATCAT+AGG + chr8_2:31700727-31700746 None:intergenic 30.0%
CTATGATTATACAACTTCCT+AGG - chr8_2:31700725-31700744 Msa1244090:intron 30.0%
!!! TGTTACTTTTATTGAGGACT+TGG + chr8_2:31700914-31700933 None:intergenic 30.0%
TGGTAGTAACTTGATATTTG+GGG + chr8_2:31700979-31700998 None:intergenic 30.0%
CTGGTAGTAACTTGATATTT+GGG + chr8_2:31700980-31700999 None:intergenic 30.0%
! TTTTATCGGCAATTTCAGTT+TGG - chr8_2:31701040-31701059 Msa1244090:intron 30.0%
CTATTCATGAAAGTCAAAAC+TGG - chr8_2:31701071-31701090 Msa1244090:intron 30.0%
! TCAAAACTGGTTTCTTTAGT+TGG - chr8_2:31701084-31701103 Msa1244090:intron 30.0%
TTGTCTACTTCCATATAACT+TGG - chr8_2:31701282-31701301 Msa1244090:intron 30.0%
! AACTGAAGCGTAATGTTTTT+GGG + chr8_2:31701417-31701436 None:intergenic 30.0%
! TAACTGAAGCGTAATGTTTT+TGG + chr8_2:31701418-31701437 None:intergenic 30.0%
TAAAAGTCTATGCCTTAACT+TGG - chr8_2:31701442-31701461 Msa1244090:intron 30.0%
ATGAATAAGAGACCAAGTTA+AGG + chr8_2:31701457-31701476 None:intergenic 30.0%
CAGTACTCATCTAAAAGTTA+AGG + chr8_2:31701530-31701549 None:intergenic 30.0%
! AAGCCAAATTCTGAAAGATT+TGG + chr8_2:31701595-31701614 None:intergenic 30.0%
! ATTGTTAGGAACTTTTCTCT+TGG - chr8_2:31701696-31701715 Msa1244090:intron 30.0%
GATTTCTTCTTAATGTAGTG+AGG - chr8_2:31701804-31701823 Msa1244090:intron 30.0%
! ATCTTTCTCTTTTACTCTTG+AGG - chr8_2:31701941-31701960 Msa1244090:intron 30.0%
! TCTTTCTCTTTTACTCTTGA+GGG - chr8_2:31701942-31701961 Msa1244090:intron 30.0%
!! AAGTTGATAAGATTGTTAGG+TGG + chr8_2:31702015-31702034 None:intergenic 30.0%
! TGATAGGTTTCAGTTTTACT+TGG - chr8_2:31702185-31702204 Msa1244090:intron 30.0%
ATTCAAACAGGAATCAAGTT+TGG + chr8_2:31702459-31702478 None:intergenic 30.0%
! GAGTATACTGATTATTTGTC+AGG + chr8_2:31702500-31702519 None:intergenic 30.0%
!! GTTGATAATGTTTCCTTTCT+AGG - chr8_2:31702710-31702729 Msa1244090:intron 30.0%
AAATTGATATGCAGGTAGTT+CGG - chr8_2:31702884-31702903 Msa1244090:intron 30.0%
TCAAATATATCTTCGTCTTG+AGG + chr8_2:31702973-31702992 None:intergenic 30.0%
TTCTTCAACATAAATGGAAC+TGG - chr8_2:31703073-31703092 Msa1244090:CDS 30.0%
! TTACATGAACATAATGGAAC+AGG + chr8_2:31703136-31703155 None:intergenic 30.0%
AGAGAAGAAGAAGAAGAAGA+AGG + chr8_2:31690279-31690298 None:intergenic 35.0%
AAAGAGTGGAACTTCTTGAT+AGG + chr8_2:31690312-31690331 None:intergenic 35.0%
GACATGTTTAGAAGAAGAAG+AGG + chr8_2:31690352-31690371 None:intergenic 35.0%
AAGATTCAATGCGAACTCAA+CGG - chr8_2:31690372-31690391 Msa1244090:three_prime_UTR 35.0%
!! CAGTTTTACTAGTTTGGATG+TGG - chr8_2:31690543-31690562 Msa1244090:intron 35.0%
!! CTTTTTCTCGAATTGATGGT+AGG - chr8_2:31690586-31690605 Msa1244090:intron 35.0%
GAGAATGCAAGACTTAAATC+AGG - chr8_2:31690684-31690703 Msa1244090:intron 35.0%
GAAGTTGTGAAGAGAGAAAT+AGG - chr8_2:31690773-31690792 Msa1244090:intron 35.0%
TTCTTATAATAAGGACCGGA+GGG + chr8_2:31691101-31691120 None:intergenic 35.0%
TTTCTTATAATAAGGACCGG+AGG + chr8_2:31691100-31691119 None:intergenic 35.0%
TTTCTTATAATAAGGACCGG+AGG - chr8_2:31691100-31691119 Msa1244090:intron 35.0%
TTCTTATAATAAGGACCGGA+GGG - chr8_2:31691101-31691120 Msa1244090:intron 35.0%
! ATAAGTTAGTTTACTCCCTC+CGG + chr8_2:31691119-31691138 None:intergenic 35.0%
GGAGTAAACTAACTTATGGT+TGG - chr8_2:31691122-31691141 Msa1244090:intron 35.0%
AAAAGTTGAGGAAGATGATG+AGG + chr8_2:31691309-31691328 None:intergenic 35.0%
! TTTTTATTAGAGGAGGCTCA+TGG + chr8_2:31691405-31691424 None:intergenic 35.0%
AAAAGATGGTGTACATGACA+GGG - chr8_2:31691522-31691541 Msa1244090:intron 35.0%
GTGCGAAGAAAAGAGAAAAA+GGG + chr8_2:31691576-31691595 None:intergenic 35.0%
GAAGAGAGACCAAATAATTG+TGG + chr8_2:31691629-31691648 None:intergenic 35.0%
CAAACCAAACGATAGAAGTT+GGG - chr8_2:31691661-31691680 Msa1244090:intron 35.0%
! CTCAACCAAACAAAGTGTTA+GGG - chr8_2:31691733-31691752 Msa1244090:intron 35.0%
GAACGAAGAAACTAACACTA+AGG - chr8_2:31691755-31691774 Msa1244090:intron 35.0%
ACTAACACTAAGGATGTGTT+TGG - chr8_2:31691765-31691784 Msa1244090:intron 35.0%
GAAGTTGTGAAGAGAGAAAT+AGG - chr8_2:31690773-31690792 Msa1244090:intron 35.0%
TTCTTATAATAAGGACCGGA+GGG + chr8_2:31691101-31691120 None:intergenic 35.0%
TTTCTTATAATAAGGACCGG+AGG + chr8_2:31691100-31691119 None:intergenic 35.0%
TTTCTTATAATAAGGACCGG+AGG - chr8_2:31691100-31691119 Msa1244090:intron 35.0%
TTCTTATAATAAGGACCGGA+GGG - chr8_2:31691101-31691120 Msa1244090:intron 35.0%
! ATAAGTTAGTTTACTCCCTC+CGG + chr8_2:31691119-31691138 None:intergenic 35.0%
GGAGTAAACTAACTTATGGT+TGG - chr8_2:31691122-31691141 Msa1244090:intron 35.0%
AAAAGTTGAGGAAGATGATG+AGG + chr8_2:31691309-31691328 None:intergenic 35.0%
! TTTTTATTAGAGGAGGCTCA+TGG + chr8_2:31691405-31691424 None:intergenic 35.0%
AAAAGATGGTGTACATGACA+GGG - chr8_2:31691522-31691541 Msa1244090:intron 35.0%
GTGCGAAGAAAAGAGAAAAA+GGG + chr8_2:31691576-31691595 None:intergenic 35.0%
GAAGAGAGACCAAATAATTG+TGG + chr8_2:31691629-31691648 None:intergenic 35.0%
CAAACCAAACGATAGAAGTT+GGG - chr8_2:31691661-31691680 Msa1244090:intron 35.0%
TCAACCAAACAAAGTGTAAC+AGG - chr8_2:31692758-31692777 Msa1244090:intron 35.0%
CAACCAAACAAAGTGTAACA+GGG - chr8_2:31692759-31692778 Msa1244090:intron 35.0%
! TTCACATTTTACTCTCAGGA+AGG - chr8_2:31692813-31692832 Msa1244090:intron 35.0%
CAATGATATGTTTGCAAGAG+CGG + chr8_2:31692843-31692862 None:intergenic 35.0%
ATCTATGAAATGCATGCACT+CGG + chr8_2:31692959-31692978 None:intergenic 35.0%
!! CACACTACTTTTGTCTATGT+AGG - chr8_2:31693031-31693050 Msa1244090:intron 35.0%
ACCATAGGATCAAATCAGAA+CGG - chr8_2:31693204-31693223 Msa1244090:intron 35.0%
AGAAAGGAAGGTTAATGTTG+TGG - chr8_2:31693435-31693454 Msa1244090:intron 35.0%
TATGCCCAATCATCTTAGAA+GGG - chr8_2:31693622-31693641 Msa1244090:intron 35.0%
TCGACTTTACCAAGTAGAAA+AGG - chr8_2:31693800-31693819 Msa1244090:intron 35.0%
CGACTTTACCAAGTAGAAAA+GGG - chr8_2:31693801-31693820 Msa1244090:intron 35.0%
ACAATGCACTAGAAGATTGA+TGG - chr8_2:31694014-31694033 Msa1244090:intron 35.0%
AAAAGGTAGTGTTACGAGAT+TGG - chr8_2:31694503-31694522 Msa1244090:intron 35.0%
AAAGGTAGTGTTACGAGATT+GGG - chr8_2:31694504-31694523 Msa1244090:intron 35.0%
! ATGACAGGTTTTCTATTGTC+TGG - chr8_2:31694676-31694695 Msa1244090:intron 35.0%
!! TTGGCTTTAGACTTTGCTTT+AGG - chr8_2:31694731-31694750 Msa1244090:intron 35.0%
TCCAAAAGGAAGAATTGTAG+AGG - chr8_2:31694763-31694782 Msa1244090:intron 35.0%
! ACCTCTACAATTCTTCCTTT+TGG + chr8_2:31694767-31694786 None:intergenic 35.0%
ATGCTTCATGTTACATTCTC+TGG - chr8_2:31694796-31694815 Msa1244090:intron 35.0%
TGCTTCATGTTACATTCTCT+GGG - chr8_2:31694797-31694816 Msa1244090:intron 35.0%
CAGTGAGTTTGACAAAATCA+CGG - chr8_2:31694939-31694958 Msa1244090:intron 35.0%
! AGAAGTACAGGTAATTCGTT+TGG - chr8_2:31695121-31695140 Msa1244090:intron 35.0%
! TGATCCAGCATATTCTAAAG+CGG - chr8_2:31695280-31695299 Msa1244090:intron 35.0%
!!! TGCCTTGAAGTTTTTTGCAT+CGG - chr8_2:31695970-31695989 Msa1244090:intron 35.0%
AACCGATGCAAAAAACTTCA+AGG + chr8_2:31695975-31695994 None:intergenic 35.0%
CGACTAGAAATTCGTTCTAT+AGG - chr8_2:31695995-31696014 Msa1244090:intron 35.0%
!!! GCTGATATTTTGGAGTAGAA+AGG + chr8_2:31696101-31696120 None:intergenic 35.0%
!!! CGGCATTTTGATTTCTGTTT+AGG - chr8_2:31696200-31696219 Msa1244090:intron 35.0%
TTGATTTCTGTTTAGGCCAA+AGG - chr8_2:31696207-31696226 Msa1244090:intron 35.0%
!!! AATGTTGTAACGGCTAGTTT+TGG + chr8_2:31696462-31696481 None:intergenic 35.0%
!! ATTATTTTGTTGCCGAGTTC+TGG + chr8_2:31696523-31696542 None:intergenic 35.0%
AATAATGATACCACATGTCG+CGG - chr8_2:31696537-31696556 Msa1244090:intron 35.0%
GCTTACTCTCTAAGTTACTT+AGG - chr8_2:31696711-31696730 Msa1244090:intron 35.0%
CACCGGAAGGTTTATTATAT+AGG + chr8_2:31696803-31696822 None:intergenic 35.0%
TACTATAATATACTCCCCTC+CGG - chr8_2:31697117-31697136 Msa1244090:intron 35.0%
AGAGGTAGTCATAACCAATA+AGG - chr8_2:31697475-31697494 Msa1244090:intron 35.0%
! GTTCTAGGCATAAACCTTAT+TGG + chr8_2:31697492-31697511 None:intergenic 35.0%
TCAGCAATGATTTCTTCAGT+TGG + chr8_2:31697529-31697548 None:intergenic 35.0%
AACCAACTTAAAAGTGGTAG+AGG - chr8_2:31697615-31697634 Msa1244090:CDS 35.0%
!!! GGTCACACTTTTTTTTTGTG+TGG - chr8_2:31697636-31697655 Msa1244090:CDS 35.0%
!!! TTTTTTTGTGTGGTTGCTGT+CGG - chr8_2:31697646-31697665 Msa1244090:CDS 35.0%
!!! TGTCGAGATTTTGACTATCT+CGG - chr8_2:31697879-31697898 Msa1244090:CDS 35.0%
TTGAGAATGTGATCAAATGC+AGG + chr8_2:31697920-31697939 None:intergenic 35.0%
GATTTCAAGGTTGCGTAAAA+GGG + chr8_2:31698268-31698287 None:intergenic 35.0%
TGATTTCAAGGTTGCGTAAA+AGG + chr8_2:31698269-31698288 None:intergenic 35.0%
CAGAACATTCTAGACTAGAA+CGG + chr8_2:31698352-31698371 None:intergenic 35.0%
GCCGAATTCGATATTTCATT+TGG - chr8_2:31698511-31698530 Msa1244090:intron 35.0%
! TCTTTTACATCCTCCAACAT+TGG - chr8_2:31698776-31698795 Msa1244090:intron 35.0%
! CTTTTACATCCTCCAACATT+GGG - chr8_2:31698777-31698796 Msa1244090:intron 35.0%
TTGTAGTTGCATGATATGGT+TGG - chr8_2:31699099-31699118 Msa1244090:intron 35.0%
TGTCTAGGTTCATTGCATAT+AGG + chr8_2:31699125-31699144 None:intergenic 35.0%
GAATAAAAAAGAAACGCGGA+AGG + chr8_2:31699233-31699252 None:intergenic 35.0%
! TTCATTTTGTGTCTCAATGG+TGG - chr8_2:31699296-31699315 Msa1244090:intron 35.0%
! TCATTTTGTGTCTCAATGGT+GGG - chr8_2:31699297-31699316 Msa1244090:intron 35.0%
GGATGATCAACATTAAGACA+TGG + chr8_2:31699347-31699366 None:intergenic 35.0%
CAAAACATTGCAGTACTTGA+AGG - chr8_2:31699425-31699444 Msa1244090:intron 35.0%
CTAGAAGAAGTTGAAAAGGT+TGG - chr8_2:31699462-31699481 Msa1244090:intron 35.0%
! TATCTTCATGACAGAGTATC+TGG - chr8_2:31699703-31699722 Msa1244090:intron 35.0%
! ATCTTCATGACAGAGTATCT+GGG - chr8_2:31699704-31699723 Msa1244090:intron 35.0%
CGTGCTTCCTCTATTTATTT+AGG - chr8_2:31699777-31699796 Msa1244090:intron 35.0%
CTTCCAAACATTCAAGAACT+GGG + chr8_2:31700004-31700023 None:intergenic 35.0%
ACTTCCAAACATTCAAGAAC+TGG + chr8_2:31700005-31700024 None:intergenic 35.0%
GTTCTTGAATGTTTGGAAGT+TGG - chr8_2:31700005-31700024 Msa1244090:intron 35.0%
! AATTGATGAGTAGAAGCACA+TGG + chr8_2:31700183-31700202 None:intergenic 35.0%
ATGTGCTTCTACTCATCAAT+TGG - chr8_2:31700182-31700201 Msa1244090:intron 35.0%
!! CTCCAACAATGGTTTTACTT+TGG - chr8_2:31700306-31700325 Msa1244090:intron 35.0%
AGCCAAAGTAAAACCATTGT+TGG + chr8_2:31700311-31700330 None:intergenic 35.0%
TGAGGTTTGGAAACAATTGT+GGG + chr8_2:31700411-31700430 None:intergenic 35.0%
ATTTGTGTCACCATCAAATG+AGG - chr8_2:31700558-31700577 Msa1244090:intron 35.0%
TTTGTGTCACCATCAAATGA+GGG - chr8_2:31700559-31700578 Msa1244090:intron 35.0%
AAACTCAAACCCTCATTTGA+TGG + chr8_2:31700571-31700590 None:intergenic 35.0%
!! CGTGTTGTTGTTTCATGTTT+GGG + chr8_2:31700949-31700968 None:intergenic 35.0%
!! TCGTGTTGTTGTTTCATGTT+TGG + chr8_2:31700950-31700969 None:intergenic 35.0%
CCTGGTAGTAACTTGATATT+TGG + chr8_2:31700981-31701000 None:intergenic 35.0%
CCAAATATCAAGTTACTACC+AGG - chr8_2:31700978-31700997 Msa1244090:intron 35.0%
TAAAACGTCAATAACTGCCA+GGG + chr8_2:31701025-31701044 None:intergenic 35.0%
ATAAAACGTCAATAACTGCC+AGG + chr8_2:31701026-31701045 None:intergenic 35.0%
! GGCAGTTATTGACGTTTTAT+CGG - chr8_2:31701026-31701045 Msa1244090:intron 35.0%
TGGTTTCTTTAGTTGGAGTT+TGG - chr8_2:31701091-31701110 Msa1244090:intron 35.0%
TTTCTTTAGTTGGAGTTTGG+TGG - chr8_2:31701094-31701113 Msa1244090:intron 35.0%
TTTAGTAAGCTTCAACTCGA+TGG - chr8_2:31701197-31701216 Msa1244090:intron 35.0%
TGTATGTTGTTGATGTACAC+AGG - chr8_2:31701484-31701503 Msa1244090:intron 35.0%
ATGTTTATATAGGTGGGGTA+CGG + chr8_2:31701630-31701649 None:intergenic 35.0%
AATCTGTTTGTCAAGACTCA+AGG + chr8_2:31701668-31701687 None:intergenic 35.0%
! GTTGTTAAGAGCTGTTACTT+TGG + chr8_2:31701993-31702012 None:intergenic 35.0%
!! AAATACGAGTTTCTGGCTAT+TGG + chr8_2:31702067-31702086 None:intergenic 35.0%
TTGCATGCTTGAATGATGAT+AGG - chr8_2:31702169-31702188 Msa1244090:intron 35.0%
! ACCCTGATATTATGCTACTT+TGG - chr8_2:31702335-31702354 Msa1244090:intron 35.0%
GCCAAAGTAGCATAATATCA+GGG + chr8_2:31702339-31702358 None:intergenic 35.0%
AGCCAAAGTAGCATAATATC+AGG + chr8_2:31702340-31702359 None:intergenic 35.0%
!! ACTTTGAGTTTGCTGATTCT+AGG - chr8_2:31702400-31702419 Msa1244090:intron 35.0%
CAGTCTTGAGTTATTCAAAC+AGG + chr8_2:31702471-31702490 None:intergenic 35.0%
! TCGTATGTGAAAAGCTTGTT+TGG + chr8_2:31702933-31702952 None:intergenic 35.0%
!! TGGACGTAGCTTTAATGATT+AGG - chr8_2:31703093-31703112 Msa1244090:CDS 35.0%
ATTAAACTGATGCCTTTGGT+CGG - chr8_2:31703272-31703291 Msa1244090:five_prime_UTR 35.0%
!! AGAATGAAAGTGTGGGGTTT+TGG + chr8_2:31690249-31690268 None:intergenic 40.0%
!! TGCTCTGAGAATGAAAGTGT+GGG + chr8_2:31690256-31690275 None:intergenic 40.0%
! ACTAGTTTGGATGTGGATTG+TGG - chr8_2:31690550-31690569 Msa1244090:intron 40.0%
! TTTCTCGAATTGATGGTAGG+AGG - chr8_2:31690589-31690608 Msa1244090:intron 40.0%
ATGTGACACTTCTGTCTGTT+AGG - chr8_2:31690731-31690750 Msa1244090:intron 40.0%
TCTGTCTGTTAGGATGTGTT+TGG - chr8_2:31690741-31690760 Msa1244090:intron 40.0%
GGAGGGAGTAAACTAACTTA+TGG - chr8_2:31691118-31691137 Msa1244090:intron 40.0%
TGAGGAAGATGATGAGGTTA+GGG + chr8_2:31691303-31691322 None:intergenic 40.0%
TTGAGGAAGATGATGAGGTT+AGG + chr8_2:31691304-31691323 None:intergenic 40.0%
ATTGATCGCAAGAGAGAAGT+AGG + chr8_2:31691345-31691364 None:intergenic 40.0%
!!! TTGTTCTTTTGGGGTTATGG+TGG + chr8_2:31691377-31691396 None:intergenic 40.0%
GAAAAGATGGTGTACATGAC+AGG - chr8_2:31691521-31691540 Msa1244090:intron 40.0%
AAAGATGGTGTACATGACAG+GGG - chr8_2:31691523-31691542 Msa1244090:intron 40.0%
GGTGCGAAGAAAAGAGAAAA+AGG + chr8_2:31691577-31691596 None:intergenic 40.0%
CGAAGAAAGCAAAAAGCTGA+GGG - chr8_2:31691601-31691620 Msa1244090:intron 40.0%
CCAACTTCTATCGTTTGGTT+TGG + chr8_2:31691663-31691682 None:intergenic 40.0%
CCAAACCAAACGATAGAAGT+TGG - chr8_2:31691660-31691679 Msa1244090:intron 40.0%
! GCTCAACCAAACAAAGTGTT+AGG - chr8_2:31691732-31691751 Msa1244090:intron 40.0%
TCGTTCCCTAACACTTTGTT+TGG + chr8_2:31691741-31691760 None:intergenic 40.0%
GGAGGGAGTAAACTAACTTA+TGG - chr8_2:31691118-31691137 Msa1244090:intron 40.0%
TGAGGAAGATGATGAGGTTA+GGG + chr8_2:31691303-31691322 None:intergenic 40.0%
TTGAGGAAGATGATGAGGTT+AGG + chr8_2:31691304-31691323 None:intergenic 40.0%
ATTGATCGCAAGAGAGAAGT+AGG + chr8_2:31691345-31691364 None:intergenic 40.0%
!!! TTGTTCTTTTGGGGTTATGG+TGG + chr8_2:31691377-31691396 None:intergenic 40.0%
GAAAAGATGGTGTACATGAC+AGG - chr8_2:31691521-31691540 Msa1244090:intron 40.0%
AAAGATGGTGTACATGACAG+GGG - chr8_2:31691523-31691542 Msa1244090:intron 40.0%
GGTGCGAAGAAAAGAGAAAA+AGG + chr8_2:31691577-31691596 None:intergenic 40.0%
CGAAGAAAGCAAAAAGCTGA+GGG - chr8_2:31691601-31691620 Msa1244090:intron 40.0%
CCAACTTCTATCGTTTGGTT+TGG + chr8_2:31691663-31691682 None:intergenic 40.0%
CCAAACCAAACGATAGAAGT+TGG - chr8_2:31691660-31691679 Msa1244090:intron 40.0%
GATCCCTGTTACACTTTGTT+TGG + chr8_2:31692765-31692784 None:intergenic 40.0%
GAGTCCACATACAACATGAT+GGG - chr8_2:31693162-31693181 Msa1244090:intron 40.0%
TCATCCCATCATGTTGTATG+TGG + chr8_2:31693169-31693188 None:intergenic 40.0%
! TCCGTTCTGATTTGATCCTA+TGG + chr8_2:31693208-31693227 None:intergenic 40.0%
AACTATAAAAAAGGGCAGCC+CGG + chr8_2:31693362-31693381 None:intergenic 40.0%
! AAATGGTAGAGTTTTGCCGT+AGG - chr8_2:31693586-31693605 Msa1244090:intron 40.0%
ATACATGCTCAAACCACCTA+CGG + chr8_2:31693605-31693624 None:intergenic 40.0%
GTATGCCCAATCATCTTAGA+AGG - chr8_2:31693621-31693640 Msa1244090:intron 40.0%
TCATCCATGGCAGAAAATGT+TGG - chr8_2:31693758-31693777 Msa1244090:intron 40.0%
! GAAACCAACATTTTCTGCCA+TGG + chr8_2:31693765-31693784 None:intergenic 40.0%
TACCAAGTAGAAAAGGGCTT+TGG - chr8_2:31693807-31693826 Msa1244090:intron 40.0%
! TACCAAAGCCCTTTTCTACT+TGG + chr8_2:31693812-31693831 None:intergenic 40.0%
!!! CATTGTGTCTTTTTTCCACG+TGG + chr8_2:31694000-31694019 None:intergenic 40.0%
CGTGAACACTAATATGCAGA+GGG + chr8_2:31694203-31694222 None:intergenic 40.0%
CCTCTGCATATTAGTGTTCA+CGG - chr8_2:31694201-31694220 Msa1244090:intron 40.0%
! AACTTTTCCCAGTGGATGTT+TGG - chr8_2:31694712-31694731 Msa1244090:intron 40.0%
! TCTAAAGCCAAACATCCACT+GGG + chr8_2:31694722-31694741 None:intergenic 40.0%
! GCTTTAGACTTTGCTTTAGG+TGG - chr8_2:31694734-31694753 Msa1244090:intron 40.0%
! TTAGACTTTGCTTTAGGTGG+TGG - chr8_2:31694737-31694756 Msa1244090:intron 40.0%
TGAGTTTGACAAAATCACGG+TGG - chr8_2:31694942-31694961 Msa1244090:intron 40.0%
! TGCAATAGCATGAAGTGCTA+GGG + chr8_2:31695102-31695121 None:intergenic 40.0%
! TCATGCTATTGCAGAAGTAC+AGG - chr8_2:31695109-31695128 Msa1244090:intron 40.0%
GTTTATGTCATGCAGAAGCT+AGG - chr8_2:31695221-31695240 Msa1244090:intron 40.0%
!! ATATTCTAAAGCGGTAGGAG+TGG - chr8_2:31695289-31695308 Msa1244090:intron 40.0%
AGAGTAATACCTTTGACCTG+TGG - chr8_2:31695363-31695382 Msa1244090:intron 40.0%
GTGCCCATATTGCATTATCA+GGG - chr8_2:31695417-31695436 Msa1244090:intron 40.0%
! GCACCCTGATAATGCAATAT+GGG + chr8_2:31695423-31695442 None:intergenic 40.0%
! AGCACCCTGATAATGCAATA+TGG + chr8_2:31695424-31695443 None:intergenic 40.0%
TGTTCACTTCAACTTCTGCT+CGG + chr8_2:31695557-31695576 None:intergenic 40.0%
AGAGATTGGAATGCAGCAAA+TGG - chr8_2:31695668-31695687 Msa1244090:intron 40.0%
GAGATTGGAATGCAGCAAAT+GGG - chr8_2:31695669-31695688 Msa1244090:intron 40.0%
! AAGAGTACAACCAGCTTTAG+AGG + chr8_2:31695745-31695764 None:intergenic 40.0%
GCACTCTTACACGAACTTTA+AGG + chr8_2:31696248-31696267 None:intergenic 40.0%
! TGTAAGAGTGCAAAAGAGCA+AGG - chr8_2:31696257-31696276 Msa1244090:intron 40.0%
TTGTAGTAAGGCATGGACAT+GGG - chr8_2:31696385-31696404 Msa1244090:intron 40.0%
!!! GTAACGGCTAGTTTTGGTTT+AGG + chr8_2:31696456-31696475 None:intergenic 40.0%
! CCGTGGACTAAATGTTGTAA+CGG + chr8_2:31696472-31696491 None:intergenic 40.0%
CCGTTACAACATTTAGTCCA+CGG - chr8_2:31696469-31696488 Msa1244090:intron 40.0%
TTCAACATAGTATCAGAGGG+TGG + chr8_2:31696572-31696591 None:intergenic 40.0%
AGTAGCTTAGAGACTAAGCT+AGG + chr8_2:31696775-31696794 None:intergenic 40.0%
TCTCTAATAATTGAGACCGG+AGG - chr8_2:31697351-31697370 Msa1244090:intron 40.0%
CTCTAATAATTGAGACCGGA+GGG - chr8_2:31697352-31697371 Msa1244090:intron 40.0%
GTCTTAGATATTACTCCCTC+CGG + chr8_2:31697370-31697389 None:intergenic 40.0%
!! GACCTCTACCACTTTTAAGT+TGG + chr8_2:31697620-31697639 None:intergenic 40.0%
GGATGACCTCTCTCTTAATT+TGG + chr8_2:31697717-31697736 None:intergenic 40.0%
!! ACCAATTCCAAGTTGGTCAT+CGG + chr8_2:31697810-31697829 None:intergenic 40.0%
TCTTGCTACCAATTCCAAGT+TGG + chr8_2:31697817-31697836 None:intergenic 40.0%
! TCGAATTCGGCTACTTTGTA+AGG + chr8_2:31698502-31698521 None:intergenic 40.0%
GTCAATAAGCTGGTAAGTGT+TGG - chr8_2:31698541-31698560 Msa1244090:intron 40.0%
TTGTCTTAAAGAAGGGCTCT+TGG - chr8_2:31698661-31698680 Msa1244090:CDS 40.0%
! GAGTTTTCAGACAATACCGA+TGG + chr8_2:31698701-31698720 None:intergenic 40.0%
CGGTATTGTCTGAAAACTCT+TGG - chr8_2:31698702-31698721 Msa1244090:intron 40.0%
TCTTGAAACAGGTTAGGACA+AGG - chr8_2:31699396-31699415 Msa1244090:intron 40.0%
TCATTGAGCATCATACCACT+AGG + chr8_2:31699959-31699978 None:intergenic 40.0%
ACTGGGTAGCAAAATACTGA+CGG + chr8_2:31699987-31700006 None:intergenic 40.0%
CTACCCAGTTCTTGAATGTT+TGG - chr8_2:31699998-31700017 Msa1244090:intron 40.0%
GCTTCTACTCATCAATTGGT+TGG - chr8_2:31700186-31700205 Msa1244090:intron 40.0%
GCAGAAAACAGAACTACTAG+AGG + chr8_2:31700219-31700238 None:intergenic 40.0%
! GTTGTATATGTGTTGTTGGG+TGG - chr8_2:31700258-31700277 Msa1244090:intron 40.0%
!! TTGTTGGGTGGTTTTGCTTT+TGG - chr8_2:31700270-31700289 Msa1244090:intron 40.0%
GAGGTTTGGAAACAATTGTG+GGG + chr8_2:31700410-31700429 None:intergenic 40.0%
CTGAGGTTTGGAAACAATTG+TGG + chr8_2:31700412-31700431 None:intergenic 40.0%
AACGATACTACAACAGAAGG+TGG + chr8_2:31700486-31700505 None:intergenic 40.0%
CCTAACGATACTACAACAGA+AGG + chr8_2:31700489-31700508 None:intergenic 40.0%
CCTTCTGTTGTAGTATCGTT+AGG - chr8_2:31700486-31700505 Msa1244090:intron 40.0%
CATGAAACAACAACACGACT+AGG - chr8_2:31700952-31700971 Msa1244090:intron 40.0%
TATCAAGTTACTACCAGGTC+AGG - chr8_2:31700983-31701002 Msa1244090:intron 40.0%
ATCAAGTTACTACCAGGTCA+GGG - chr8_2:31700984-31701003 Msa1244090:intron 40.0%
GCTAATAACTTGAGCTCAGA+TGG + chr8_2:31701336-31701355 None:intergenic 40.0%
GCGCCAAATCTTTCAGAATT+TGG - chr8_2:31701589-31701608 Msa1244090:intron 40.0%
TAAGAGAGAATTCCCAAACC+TGG - chr8_2:31701721-31701740 Msa1244090:intron 40.0%
AAGAGAGAATTCCCAAACCT+GGG - chr8_2:31701722-31701741 Msa1244090:intron 40.0%
ATTCAAATCTGCCCAGGTTT+GGG + chr8_2:31701736-31701755 None:intergenic 40.0%
TATTCAAATCTGCCCAGGTT+TGG + chr8_2:31701737-31701756 None:intergenic 40.0%
TGGTTTATTCAAATCTGCCC+AGG + chr8_2:31701742-31701761 None:intergenic 40.0%
GGGCAGATTTGAATAAACCA+AGG - chr8_2:31701742-31701761 Msa1244090:intron 40.0%
GCTAAGCAGTTTCACCAAAA+AGG + chr8_2:31702262-31702281 None:intergenic 40.0%
TGGTGAAACTGCTTAGCATA+AGG - chr8_2:31702265-31702284 Msa1244090:intron 40.0%
AGACTCATAGTCATGGAAGT+TGG + chr8_2:31702528-31702547 None:intergenic 40.0%
TTTGAGCAGACTCATAGTCA+TGG + chr8_2:31702535-31702554 None:intergenic 40.0%
ATACTCATAGTCGTGGAAGT+TGG + chr8_2:31702610-31702629 None:intergenic 40.0%
TTTGAGCATACTCATAGTCG+TGG + chr8_2:31702617-31702636 None:intergenic 40.0%
GCATACTCTTCATCCTAGAA+AGG + chr8_2:31702726-31702745 None:intergenic 40.0%
GTTCGGTCTTCAATGAATGA+TGG - chr8_2:31702901-31702920 Msa1244090:intron 40.0%
TTTGAAGAAAGTCTGTGACG+AGG - chr8_2:31702988-31703007 Msa1244090:CDS 40.0%
AAGTTTGGGTGATAGATTGC+AGG - chr8_2:31703028-31703047 Msa1244090:CDS 40.0%
! CTTTGACTCGACCAGTTTAA+TGG - chr8_2:31703217-31703236 Msa1244090:five_prime_UTR 40.0%
GGTGATTAAACTGATGCCTT+TGG - chr8_2:31703268-31703287 Msa1244090:five_prime_UTR 40.0%
TTAAACTGATGCCTTTGGTC+GGG - chr8_2:31703273-31703292 Msa1244090:five_prime_UTR 40.0%
!! GCTCTGAGAATGAAAGTGTG+GGG + chr8_2:31690255-31690274 None:intergenic 45.0%
!! GTGCTCTGAGAATGAAAGTG+TGG + chr8_2:31690257-31690276 None:intergenic 45.0%
GAAGAAGAGGAAGCAAAGAG+AGG + chr8_2:31690339-31690358 None:intergenic 45.0%
!! GTACATGACAGGGGCATTAA+TGG - chr8_2:31691532-31691551 Msa1244090:intron 45.0%
! GCTTTTTGCTTTCTTCGCTG+AGG + chr8_2:31691598-31691617 None:intergenic 45.0%
GCGAAGAAAGCAAAAAGCTG+AGG - chr8_2:31691600-31691619 Msa1244090:intron 45.0%
CTGAGGGTCCCACAATTATT+TGG - chr8_2:31691617-31691636 Msa1244090:intron 45.0%
GAAGCCCAACTTCTATCGTT+TGG + chr8_2:31691668-31691687 None:intergenic 45.0%
!! GTACATGACAGGGGCATTAA+TGG - chr8_2:31691532-31691551 Msa1244090:intron 45.0%
! GCTTTTTGCTTTCTTCGCTG+AGG + chr8_2:31691598-31691617 None:intergenic 45.0%
GCGAAGAAAGCAAAAAGCTG+AGG - chr8_2:31691600-31691619 Msa1244090:intron 45.0%
CTGAGGGTCCCACAATTATT+TGG - chr8_2:31691617-31691636 Msa1244090:intron 45.0%
GAAGCCCAACTTCTATCGTT+TGG + chr8_2:31691668-31691687 None:intergenic 45.0%
CGAGTCCACATACAACATGA+TGG - chr8_2:31693161-31693180 Msa1244090:intron 45.0%
ATACTGCTATGCTGGATGAG+TGG - chr8_2:31693463-31693482 Msa1244090:intron 45.0%
!! GTGGCCCTTCTAAGATGATT+GGG + chr8_2:31693629-31693648 None:intergenic 45.0%
!! AGTGGCCCTTCTAAGATGAT+TGG + chr8_2:31693630-31693649 None:intergenic 45.0%
TCATCTTAGAAGGGCCACTA+TGG - chr8_2:31693631-31693650 Msa1244090:intron 45.0%
ACCTTGTCTATCCTCCATAG+TGG + chr8_2:31693648-31693667 None:intergenic 45.0%
ATGGAGGATAGACAAGGTGA+AGG - chr8_2:31693650-31693669 Msa1244090:intron 45.0%
CGACCTATAGACATCATCCA+TGG - chr8_2:31693745-31693764 Msa1244090:intron 45.0%
CTGCCATGGATGATGTCTAT+AGG + chr8_2:31693751-31693770 None:intergenic 45.0%
CCGTGAACACTAATATGCAG+AGG + chr8_2:31694204-31694223 None:intergenic 45.0%
TCTATTCCAGCAAAAGGCTC+TGG - chr8_2:31694446-31694465 Msa1244090:intron 45.0%
! ATTAGAGCGCCTAACATGAC+AGG - chr8_2:31694661-31694680 Msa1244090:intron 45.0%
! TGCAGTGAAACTTTTCCCAG+TGG - chr8_2:31694704-31694723 Msa1244090:intron 45.0%
! GTCTAAAGCCAAACATCCAC+TGG + chr8_2:31694723-31694742 None:intergenic 45.0%
! TTAGGTGGTGGTCTTCCAAA+AGG - chr8_2:31694749-31694768 Msa1244090:intron 45.0%
! AATAGCATGAAGTGCTAGGG+TGG + chr8_2:31695099-31695118 None:intergenic 45.0%
! CTGCAATAGCATGAAGTGCT+AGG + chr8_2:31695103-31695122 None:intergenic 45.0%
TATGTCATGCAGAAGCTAGG+AGG - chr8_2:31695224-31695243 Msa1244090:intron 45.0%
!! CCTACCGCTTTAGAATATGC+TGG + chr8_2:31695287-31695306 None:intergenic 45.0%
!! CCAGCATATTCTAAAGCGGT+AGG - chr8_2:31695284-31695303 Msa1244090:intron 45.0%
ATCCATTCCAACACAACCAC+AGG + chr8_2:31695382-31695401 None:intergenic 45.0%
GGTGCCCATATTGCATTATC+AGG - chr8_2:31695416-31695435 Msa1244090:intron 45.0%
!! TGCATTATCAGGGTGCTGTA+TGG - chr8_2:31695427-31695446 Msa1244090:intron 45.0%
GCAGATCGTATGTGTAGATC+TGG - chr8_2:31695486-31695505 Msa1244090:intron 45.0%
GTCCACGCAAATGAGATCTA+TGG + chr8_2:31695514-31695533 None:intergenic 45.0%
TTCACTTCAACTTCTGCTCG+GGG + chr8_2:31695555-31695574 None:intergenic 45.0%
GTTCACTTCAACTTCTGCTC+GGG + chr8_2:31695556-31695575 None:intergenic 45.0%
AATGCAGCAAATGGGATTGC+AGG - chr8_2:31695677-31695696 Msa1244090:intron 45.0%
CAGACATCTTACGCAAAGCT+TGG + chr8_2:31695716-31695735 None:intergenic 45.0%
CAAGCTTTGCGTAAGATGTC+TGG - chr8_2:31695714-31695733 Msa1244090:intron 45.0%
!! TCTGGAAATGCCTCTAAAGC+TGG - chr8_2:31695732-31695751 Msa1244090:intron 45.0%
GGAAATCCAGAAGTGACAAG+TGG - chr8_2:31695941-31695960 Msa1244090:intron 45.0%
AATCCAGAAGTGACAAGTGG+TGG - chr8_2:31695944-31695963 Msa1244090:intron 45.0%
! ATTCCACCACTTGTCACTTC+TGG + chr8_2:31695950-31695969 None:intergenic 45.0%
GCCAAAGGAGATGAAGAAGT+TGG - chr8_2:31696222-31696241 Msa1244090:intron 45.0%
GCCAACTTCTTCATCTCCTT+TGG + chr8_2:31696226-31696245 None:intergenic 45.0%
CTTGTAGTAAGGCATGGACA+TGG - chr8_2:31696384-31696403 Msa1244090:intron 45.0%
AGGCATGGACATGGGTTTAT+TGG - chr8_2:31696393-31696412 Msa1244090:intron 45.0%
GACATGGGTTTATTGGTGAG+CGG - chr8_2:31696400-31696419 Msa1244090:intron 45.0%
CTGAGGAATCAATTCTTCCG+TGG + chr8_2:31696489-31696508 None:intergenic 45.0%
! TTCTGGAAAGTTAGGGACTG+AGG + chr8_2:31696506-31696525 None:intergenic 45.0%
GTCCCTAACTTTCCAGAACT+CGG - chr8_2:31696508-31696527 Msa1244090:intron 45.0%
!! TGCCGAGTTCTGGAAAGTTA+GGG + chr8_2:31696513-31696532 None:intergenic 45.0%
!! TTGCCGAGTTCTGGAAAGTT+AGG + chr8_2:31696514-31696533 None:intergenic 45.0%
TGTGTGTCTGAATAGCACAC+CGG + chr8_2:31696820-31696839 None:intergenic 45.0%
ATTAAGAGAGAGGTCATCCG+TGG - chr8_2:31697718-31697737 Msa1244090:CDS 45.0%
! GACTCGGTCTTGATGTTTGT+TGG - chr8_2:31697752-31697771 Msa1244090:intron 45.0%
GAACTACCAGAGACTTTGAG+AGG - chr8_2:31697781-31697800 Msa1244090:intron 45.0%
ACCGATGACCAACTTGGAAT+TGG - chr8_2:31697806-31697825 Msa1244090:intron 45.0%
AGTCAAAATCTCGACAGCTG+TGG + chr8_2:31697875-31697894 None:intergenic 45.0%
AAGGGCTCTTGGTACAGTTA+TGG - chr8_2:31698672-31698691 Msa1244090:CDS 45.0%
AGGGCTCTTGGTACAGTTAT+GGG - chr8_2:31698673-31698692 Msa1244090:CDS 45.0%
TTCGCAAATCCCAATGTTGG+AGG + chr8_2:31698789-31698808 None:intergenic 45.0%
TCCAACATTGGGATTTGCGA+AGG - chr8_2:31698788-31698807 Msa1244090:intron 45.0%
TCCTTCGCAAATCCCAATGT+TGG + chr8_2:31698792-31698811 None:intergenic 45.0%
AGGATCCCATGTTGAAGTTG+TGG + chr8_2:31699939-31699958 None:intergenic 45.0%
ACTTCAACATGGGATCCTAG+TGG - chr8_2:31699941-31699960 Msa1244090:intron 45.0%
CTGGGTAGCAAAATACTGAC+GGG + chr8_2:31699986-31700005 None:intergenic 45.0%
ACATGTGACCACCGAAACAA+AGG + chr8_2:31700127-31700146 None:intergenic 45.0%
TGTTTGCGACTCTCCAACAA+TGG - chr8_2:31700295-31700314 Msa1244090:intron 45.0%
ATGTGGCTATCTGTGTAGCA+TGG - chr8_2:31700368-31700387 Msa1244090:intron 45.0%
GCTATCTGTGTAGCATGGTT+TGG - chr8_2:31700373-31700392 Msa1244090:intron 45.0%
! TGTAGCATGGTTTGGCACTT+TGG - chr8_2:31700381-31700400 Msa1244090:intron 45.0%
ACTACAACAGAAGGTGGTGT+TGG + chr8_2:31700480-31700499 None:intergenic 45.0%
TCAAGTTACTACCAGGTCAG+GGG - chr8_2:31700985-31701004 Msa1244090:intron 45.0%
!! AGAGTGTAGCTTTGTGTGCA+AGG + chr8_2:31701871-31701890 None:intergenic 45.0%
!! CACTGGTTCGACCATTAAAC+TGG + chr8_2:31703231-31703250 None:intergenic 45.0%
AGTTCAACCGATTGCATCAC+TGG + chr8_2:31703248-31703267 None:intergenic 45.0%
AGTGATGCAATCGGTTGAAC+TGG - chr8_2:31703247-31703266 Msa1244090:five_prime_UTR 45.0%
!!! TTATATATATGTAATTTTTT+TGG - chr8_2:31694074-31694093 Msa1244090:intron 5.0%
!!! TATATATATGTAATTTTTTT+GGG - chr8_2:31694075-31694094 Msa1244090:intron 5.0%
!!! TACTTTTATTATATAATTTA+GGG - chr8_2:31695602-31695621 Msa1244090:intron 5.0%
!! ATACATTAATATAAAAAATA+GGG + chr8_2:31695644-31695663 None:intergenic 5.0%
!! TATACATTAATATAAAAAAT+AGG + chr8_2:31695645-31695664 None:intergenic 5.0%
!!! TATTTTTTATATTAATGTAT+AGG - chr8_2:31695644-31695663 Msa1244090:intron 5.0%
!!! ATTTTTTATATTAATGTATA+GGG - chr8_2:31695645-31695664 Msa1244090:intron 5.0%
CAAAGAGAGGAGGCAAAGAG+TGG + chr8_2:31690326-31690345 None:intergenic 50.0%
GAAGAGGAAGCAAAGAGAGG+AGG + chr8_2:31690336-31690355 None:intergenic 50.0%
GAAGCGAGCGTCAAAATCAG+CGG + chr8_2:31690406-31690425 None:intergenic 50.0%
TTGACGCTCGCTTCGTTGAT+AGG - chr8_2:31690412-31690431 Msa1244090:CDS 50.0%
TGACGCTCGCTTCGTTGATA+GGG - chr8_2:31690413-31690432 Msa1244090:CDS 50.0%
CAAAAGCTTCCGCATGCACA+AGG + chr8_2:31693335-31693354 None:intergenic 50.0%
! ATGCGGAAGCTTTTGTGCAC+CGG - chr8_2:31693340-31693359 Msa1244090:intron 50.0%
TGGAGCTGATACTGCTATGC+TGG - chr8_2:31693455-31693474 Msa1244090:intron 50.0%
! TGGTAGAGTTTTGCCGTAGG+TGG - chr8_2:31693589-31693608 Msa1244090:intron 50.0%
TCTTAGAAGGGCCACTATGG+AGG - chr8_2:31693634-31693653 Msa1244090:intron 50.0%
GCCACTATGGAGGATAGACA+AGG - chr8_2:31693644-31693663 Msa1244090:intron 50.0%
ATCGTGTGCCAACCAGATCA+TGG - chr8_2:31695326-31695345 Msa1244090:intron 50.0%
CCATCTCTCCATGATCTGGT+TGG + chr8_2:31695337-31695356 None:intergenic 50.0%
CCAACCAGATCATGGAGAGA+TGG - chr8_2:31695334-31695353 Msa1244090:intron 50.0%
AGAGCCATCTCTCCATGATC+TGG + chr8_2:31695341-31695360 None:intergenic 50.0%
CCAACACAACCACAGGTCAA+AGG + chr8_2:31695375-31695394 None:intergenic 50.0%
CCTTTGACCTGTGGTTGTGT+TGG - chr8_2:31695372-31695391 Msa1244090:intron 50.0%
GACCTGTGGTTGTGTTGGAA+TGG - chr8_2:31695377-31695396 Msa1244090:intron 50.0%
CGCCATAGATCTCATTTGCG+TGG - chr8_2:31695509-31695528 Msa1244090:intron 50.0%
AATGATACCACATGTCGCGG+AGG - chr8_2:31696540-31696559 Msa1244090:intron 50.0%
TGTCTGAATAGCACACCGGA+AGG + chr8_2:31696816-31696835 None:intergenic 50.0%
CCTATCCAAGATCCACCGTT+GGG - chr8_2:31696891-31696910 Msa1244090:intron 50.0%
! TTTTGTGTGGTTGCTGTCGG+AGG - chr8_2:31697649-31697668 Msa1244090:CDS 50.0%
GGCTTAACCATGACGTTGGT+CGG - chr8_2:31697670-31697689 Msa1244090:CDS 50.0%
CATGACGTTGGTCGGATGAT+GGG - chr8_2:31697678-31697697 Msa1244090:CDS 50.0%
AATGAGGACACGCCCTTTAG+AGG + chr8_2:31697982-31698001 None:intergenic 50.0%
! AGGGCGTGTCCTCATTTTAG+AGG - chr8_2:31697986-31698005 Msa1244090:intron 50.0%
TGGAGAGGGAGTCAATAAGC+TGG - chr8_2:31698531-31698550 Msa1244090:intron 50.0%
GGGCTCTTGGTACAGTTATG+GGG - chr8_2:31698674-31698693 Msa1244090:CDS 50.0%
GGTACAGTTATGGGGACCAT+CGG - chr8_2:31698682-31698701 Msa1244090:intron 50.0%
AAAGAAACGCGGAAGGGAAG+AGG + chr8_2:31699226-31699245 None:intergenic 50.0%
! GTAGCAAAATACTGACGGGC+AGG + chr8_2:31699982-31700001 None:intergenic 50.0%
TCGCTTCAACTACCAGTTCC+TGG - chr8_2:31700147-31700166 Msa1244090:intron 50.0%
AACTATTGGGAGCTGACGAG+AGG + chr8_2:31700241-31700260 None:intergenic 50.0%
!! GAAGGTGGTGTTGGTAGAGT+TGG + chr8_2:31700471-31700490 None:intergenic 50.0%
CAAGTTACTACCAGGTCAGG+GGG - chr8_2:31700986-31701005 Msa1244090:intron 50.0%
TAACTGCCAGGGTCTTTCAG+TGG + chr8_2:31701014-31701033 None:intergenic 50.0%
! TCTTCGTCTTGAGGAAGCAC+TGG + chr8_2:31702964-31702983 None:intergenic 50.0%
GGTCGAACCAGTGATGCAAT+CGG - chr8_2:31703238-31703257 Msa1244090:five_prime_UTR 50.0%
! GGGAAGGGGTCTCACCATTT+TGG + chr8_2:31693309-31693328 None:intergenic 55.0%
CATGCACAAGGTACGGGAAG+GGG + chr8_2:31693323-31693342 None:intergenic 55.0%
GCATGCACAAGGTACGGGAA+GGG + chr8_2:31693324-31693343 None:intergenic 55.0%
CTTCCCGTACCTTGTGCATG+CGG - chr8_2:31693323-31693342 Msa1244090:intron 55.0%
CTTCCGCATGCACAAGGTAC+GGG + chr8_2:31693329-31693348 None:intergenic 55.0%
GCTTCCGCATGCACAAGGTA+CGG + chr8_2:31693330-31693349 None:intergenic 55.0%
! TGCGGAAGCTTTTGTGCACC+GGG - chr8_2:31693341-31693360 Msa1244090:intron 55.0%
! CTGCTTCCAGAGCCTTTTGC+TGG + chr8_2:31694455-31694474 None:intergenic 55.0%
GTTACGAGATTGGGCAGTGC+TGG - chr8_2:31694513-31694532 Msa1244090:intron 55.0%
ATACCACATGTCGCGGAGGA+TGG - chr8_2:31696544-31696563 Msa1244090:intron 55.0%
GCCTATCCAAGATCCACCGT+TGG - chr8_2:31696890-31696909 Msa1244090:intron 55.0%
CCCAACGGTGGATCTTGGAT+AGG + chr8_2:31696894-31696913 None:intergenic 55.0%
GGAATCCCAACGGTGGATCT+TGG + chr8_2:31696899-31696918 None:intergenic 55.0%
GTGGCAATGCGGAATCCCAA+CGG + chr8_2:31696909-31696928 None:intergenic 55.0%
TTGCCACGCTTCATGCCCAT+TGG - chr8_2:31696922-31696941 Msa1244090:intron 55.0%
TGCCACGCTTCATGCCCATT+GGG - chr8_2:31696923-31696942 Msa1244090:intron 55.0%
CAACACACCCTCTCATGCTC+GGG + chr8_2:31696982-31697001 None:intergenic 55.0%
CCAACACACCCTCTCATGCT+CGG + chr8_2:31696983-31697002 None:intergenic 55.0%
CGGAGGCTTAACCATGACGT+TGG - chr8_2:31697666-31697685 Msa1244090:CDS 55.0%
CCATCATCCGACCAACGTCA+TGG + chr8_2:31697680-31697699 None:intergenic 55.0%
CCATGACGTTGGTCGGATGA+TGG - chr8_2:31697677-31697696 Msa1244090:CDS 55.0%
CGGTCACCTCTCAAAGTCTC+TGG + chr8_2:31697790-31697809 None:intergenic 55.0%
GAGGTGACCGATGACCAACT+TGG - chr8_2:31697800-31697819 Msa1244090:intron 55.0%
GGACTTCAAGCACCAGGAAC+TGG + chr8_2:31700162-31700181 None:intergenic 55.0%
GCACATGGACTTCAAGCACC+AGG + chr8_2:31700168-31700187 None:intergenic 55.0%
!! GGTGGTGTTGGTAGAGTTGG+TGG + chr8_2:31700468-31700487 None:intergenic 55.0%
ATCGTTAGGACTTCCGCTGC+AGG - chr8_2:31700500-31700519 Msa1244090:intron 55.0%
GTTGAAGCTGTGACGTCGTC+TGG - chr8_2:31700631-31700650 Msa1244090:intron 55.0%
AGCTGTGACGTCGTCTGGTT+TGG - chr8_2:31700636-31700655 Msa1244090:intron 55.0%
! GCTGTGACGTCGTCTGGTTT+GGG - chr8_2:31700637-31700656 Msa1244090:intron 55.0%
GATGCCTTTGGTCGGGTAGT+CGG - chr8_2:31703280-31703299 Msa1244090:five_prime_UTR 55.0%
CGCATGCACAAGGTACGGGA+AGG + chr8_2:31693325-31693344 None:intergenic 60.0%
! ACGAGATTGGGCAGTGCTGG+TGG - chr8_2:31694516-31694535 Msa1244090:intron 60.0%
TCGGGGAGTGAGAGCTGAGA+CGG + chr8_2:31695538-31695557 None:intergenic 60.0%
GTACCATCCTCCGCGACATG+TGG + chr8_2:31696550-31696569 None:intergenic 60.0%
GCAATGCGGAATCCCAACGG+TGG + chr8_2:31696906-31696925 None:intergenic 60.0%
GGGCATGAAGCGTGGCAATG+CGG + chr8_2:31696920-31696939 None:intergenic 60.0%
GACCCAATGGGCATGAAGCG+TGG + chr8_2:31696928-31696947 None:intergenic 60.0%
CCCTCACGCTCAGACCCAAT+GGG + chr8_2:31696940-31696959 None:intergenic 60.0%
CCCATTGGGTCTGAGCGTGA+GGG - chr8_2:31696937-31696956 Msa1244090:intron 60.0%
CCATTGGGTCTGAGCGTGAG+GGG - chr8_2:31696938-31696957 Msa1244090:intron 60.0%
CATTGGGTCTGAGCGTGAGG+GGG - chr8_2:31696939-31696958 Msa1244090:intron 60.0%
!!! CTGAGCGTGAGGGGGTGTTT+TGG - chr8_2:31696947-31696966 Msa1244090:intron 60.0%
AATCCCCTCCCGAGCATGAG+AGG - chr8_2:31696971-31696990 Msa1244090:intron 60.0%
ATCCCCTCCCGAGCATGAGA+GGG - chr8_2:31696972-31696991 Msa1244090:intron 60.0%
ACACCCTCTCATGCTCGGGA+GGG + chr8_2:31696978-31696997 None:intergenic 60.0%
! CCGAGCATGAGAGGGTGTGT+TGG - chr8_2:31696980-31696999 Msa1244090:intron 60.0%
AGAGAGAGGTCATCCGTGGC+TGG - chr8_2:31697722-31697741 Msa1244090:intron 60.0%
CGAGTCGTCTACACCAGCCA+CGG + chr8_2:31697738-31697757 None:intergenic 60.0%
CGTGGCTGGTGTAGACGACT+CGG - chr8_2:31697736-31697755 Msa1244090:intron 60.0%
ACTTCCGCTGCAGGTAGCAC+CGG - chr8_2:31700509-31700528 Msa1244090:intron 60.0%
TTCAGTGGTTCCCCCTGACC+TGG + chr8_2:31700999-31701018 None:intergenic 60.0%
GGGGAACCACTGAAAGACCC+TGG - chr8_2:31701005-31701024 Msa1244090:intron 60.0%
CAGTCCGACTACCCGACCAA+AGG + chr8_2:31703287-31703306 None:intergenic 60.0%
CTTTGGTCGGGTAGTCGGAC+TGG - chr8_2:31703285-31703304 Msa1244090:five_prime_UTR 60.0%
GCCCATTGGGTCTGAGCGTG+AGG - chr8_2:31696936-31696955 Msa1244090:intron 65.0%
CCCCTCACGCTCAGACCCAA+TGG + chr8_2:31696941-31696960 None:intergenic 65.0%
CACCCTCTCATGCTCGGGAG+GGG + chr8_2:31696977-31696996 None:intergenic 65.0%
CACACCCTCTCATGCTCGGG+AGG + chr8_2:31696979-31696998 None:intergenic 65.0%
!! TGGACCGGTGCTACCTGCAG+CGG + chr8_2:31700516-31700535 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 31690080 31703325 31690080 ID=Msa1244090;Name=Msa1244090
chr8_2 mRNA 31690080 31703325 31690080 ID=Msa1244090-mRNA-1;Parent=Msa1244090;Name=Msa1244090-mRNA-1;_AED=0.13;_eAED=0.13;_QI=145|0.9|1|1|0.9|0.90|11|320|371
chr8_2 exon 31690080 31690507 31690080 ID=Msa1244090-mRNA-1:exon:10454;Parent=Msa1244090-mRNA-1
chr8_2 exon 31694853 31694915 31694853 ID=Msa1244090-mRNA-1:exon:10453;Parent=Msa1244090-mRNA-1
chr8_2 exon 31697127 31697183 31697127 ID=Msa1244090-mRNA-1:exon:10452;Parent=Msa1244090-mRNA-1
chr8_2 exon 31697375 31697479 31697375 ID=Msa1244090-mRNA-1:exon:10451;Parent=Msa1244090-mRNA-1
chr8_2 exon 31697614 31697739 31697614 ID=Msa1244090-mRNA-1:exon:10450;Parent=Msa1244090-mRNA-1
chr8_2 exon 31697836 31697921 31697836 ID=Msa1244090-mRNA-1:exon:10449;Parent=Msa1244090-mRNA-1
chr8_2 exon 31698040 31698169 31698040 ID=Msa1244090-mRNA-1:exon:10448;Parent=Msa1244090-mRNA-1
chr8_2 exon 31698275 31698337 31698275 ID=Msa1244090-mRNA-1:exon:10447;Parent=Msa1244090-mRNA-1
chr8_2 exon 31698621 31698696 31698621 ID=Msa1244090-mRNA-1:exon:10446;Parent=Msa1244090-mRNA-1
chr8_2 exon 31698858 31698949 31698858 ID=Msa1244090-mRNA-1:exon:10445;Parent=Msa1244090-mRNA-1
chr8_2 exon 31702971 31703325 31702971 ID=Msa1244090-mRNA-1:exon:10444;Parent=Msa1244090-mRNA-1
chr8_2 five_prime_UTR 31703181 31703325 31703181 ID=Msa1244090-mRNA-1:five_prime_utr;Parent=Msa1244090-mRNA-1
chr8_2 CDS 31702971 31703180 31702971 ID=Msa1244090-mRNA-1:cds;Parent=Msa1244090-mRNA-1
chr8_2 CDS 31698858 31698949 31698858 ID=Msa1244090-mRNA-1:cds;Parent=Msa1244090-mRNA-1
chr8_2 CDS 31698621 31698696 31698621 ID=Msa1244090-mRNA-1:cds;Parent=Msa1244090-mRNA-1
chr8_2 CDS 31698275 31698337 31698275 ID=Msa1244090-mRNA-1:cds;Parent=Msa1244090-mRNA-1
chr8_2 CDS 31698040 31698169 31698040 ID=Msa1244090-mRNA-1:cds;Parent=Msa1244090-mRNA-1
chr8_2 CDS 31697836 31697921 31697836 ID=Msa1244090-mRNA-1:cds;Parent=Msa1244090-mRNA-1
chr8_2 CDS 31697614 31697739 31697614 ID=Msa1244090-mRNA-1:cds;Parent=Msa1244090-mRNA-1
chr8_2 CDS 31697375 31697479 31697375 ID=Msa1244090-mRNA-1:cds;Parent=Msa1244090-mRNA-1
chr8_2 CDS 31697127 31697183 31697127 ID=Msa1244090-mRNA-1:cds;Parent=Msa1244090-mRNA-1
chr8_2 CDS 31694853 31694915 31694853 ID=Msa1244090-mRNA-1:cds;Parent=Msa1244090-mRNA-1
chr8_2 CDS 31690400 31690507 31690400 ID=Msa1244090-mRNA-1:cds;Parent=Msa1244090-mRNA-1
chr8_2 three_prime_UTR 31690080 31690399 31690080 ID=Msa1244090-mRNA-1:three_prime_utr;Parent=Msa1244090-mRNA-1
Gene Sequence

>Msa1244090

ATGGATTTGGTGTTTTTTACTCCAAAACCCCACACTTTCATTCTCAGAGCACCTTCTTCTTCTTCTTCTTCTCTTCTATTTCATCCTATCAAGAAGTTCCACTCTTTGCCTCCTCTCTTTGCTTCCTCTTCTTCTTCTAAACATGTCAAGATTCAATGCGAACTCAACGGTTCTCTTTCCGCTGATTTTGACGCTCGCTTCGTTGATAGGCAAAAGGCTCTGGAAGCAGCAATGAATGATATAAACAACTCTTTCGGAAAAGGTAGTGTTACGAGATTGGGCAGTGCTGGTGGAGCATTAGTTGAAACTTTTCCCAGTGGATGTTTGGCTTTAGACTTTGCTTTAGGTGGTGGTCTTCCAAAAGGAAGAATTGTAGAGATATTTGGACCAGAAAGCAGTGGGAAGACCACCCTAGCACTTCATGCTATTGCAGAAGTACAGAAGCTAGGAGGCAATGCAATGCTTGTTGATGCAGAGCATGCTTTTGATCCAGCATATTCTAAAGCGGTAGGAGTGGATGTAGAAAATTTAATCGTGTGCCAACCAGATCATGGAGAGATGGCTCTTGAGATCGCAGATCGTATGTGTAGATCTGGCGCCATAGATCTCATTTGCGTGGACTCCGTCTCAGCTCTCACTCCCCGAGCAGAAGTTGAAGGAGAGATTGGAATGCAGCAAATGGGATTGCAGGCTCGTCTTATGAGCCAAGCTTTGCGTAAGATGTCTGGAAATGCCTCTAAAGCTGGTTGTACTCTTATATTTCTGAACCAAATAAGATATAAGATTGGTGTCTATTATGGAAATCCAGAAGTGACAAGTGGTGGAATTGCCTTGAAGTTTTTTGCATCGGTTCGACTAGAAATTCGTTCTATAGGGAAGATAAAGTCTGCCAAAGGAGATGAAGAAGTTGGCCTTAAAGTTCGTGTAAGAGTGCAAAAGAGCAAGGTGTCAAGACCTTACAAAGTAGCCGAATTCGATATTTCATTTGGAGAGGGAGTCAATAAGCTGGTAGTTCGGTCTTCAATGAATGATGGAACTAACCAAACAAGCTTTTCACATACGAAGAATAGTCCAGTGCTTCCTCAAGACGAAGATATATTTGAAGAAAGTCTGTGA
Protein sequence

>Msa1244090

MDLVFFTPKPHTFILRAPSSSSSSLLFHPIKKFHSLPPLFASSSSSKHVKIQCELNGSLSADFDARFVDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLALDFALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQPDHGEMALEIADRMCRSGAIDLICVDSVSALTPRAEVEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSIGKIKSAKGDEEVGLKVRVRVQKSKVSRPYKVAEFDISFGEGVNKLVVRSSMNDGTNQTSFSHTKNSPVLPQDEDIFEESL*