AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1285150


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1285150 MtrunA17_Chr8g0358881 85.511 421 8 2 1 371 1 418 0.0 707
Msa1285150 MtrunA17_Chr2g0299491 53.383 266 117 5 73 333 66 329 1.18e-88 273
Msa1285150 MtrunA17_Chr4g0071061 54.511 266 114 5 73 333 60 323 3.59e-84 261
Msa1285150 MtrunA17_Chr7g0257041 37.798 336 195 10 6 332 3 333 2.70e-56 189
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1285150 AT1G79050.1 79.403 335 65 2 6 336 15 349 0.0 530
Msa1285150 AT1G79050.2 79.257 323 63 2 6 324 15 337 0.0 510
Msa1285150 AT2G19490.1 53.480 273 120 5 70 337 58 328 2.36e-85 265
Msa1285150 AT3G10140.1 40.702 285 159 5 53 332 48 327 1.95e-52 179
Msa1285150 AT3G32920.1 50.495 202 79 5 101 301 12 193 4.76e-49 165
Msa1285150 AT3G32920.5 47.590 166 71 2 101 265 12 162 1.02e-39 139
Msa1285150 AT3G32920.3 50.360 139 53 3 101 238 12 135 1.06e-30 116
Msa1285150 AT3G32920.2 50.360 139 53 3 101 238 12 135 1.06e-30 116
Msa1285150 AT3G32920.4 52.703 74 35 0 165 238 9 82 5.62e-14 68.9

Find 107 sgRNAs with CRISPR-Local

Find 729 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGGTCTTCCCACTGCTTTC+TGG 0.112610 8_3:+28962189 None:intergenic
GCACTCTTACACGAACTTTA+AGG 0.157262 8_3:+28961007 None:intergenic
TATTCTTTCTTCAACATAAA+TGG 0.167081 8_3:-28953410 Msa1285150:three_prime_UTR
CAAGTACCTTATATCTTATT+TGG 0.169890 8_3:+28961483 None:intergenic
TATATCTGTTTCCAGATATT+TGG 0.171997 8_3:-28962213 Msa1285150:intron
TTGTAGATTGGTGTCTATTA+TGG 0.178441 8_3:-28961332 Msa1285150:intron
TTGGCTTTAGACTTTGCTTT+AGG 0.200745 8_3:-28962579 Msa1285150:CDS
CTTTGACTCGACCAGTTTAA+TGG 0.236591 8_3:-28953255 Msa1285150:three_prime_UTR
AAAATGAAAGTGTGGGGTTT+TGG 0.237380 8_3:+28964559 None:intergenic
ATTCCACCACTTGTCACTTC+TGG 0.258174 8_3:+28961305 None:intergenic
TGGCTTTAGACTTTGCTTTA+GGG 0.261485 8_3:-28962578 Msa1285150:CDS
ACCTCTACAATTCTTCCTTT+TGG 0.272094 8_3:+28962546 None:intergenic
AATGATATAAACAACTCTTT+TGG 0.290327 8_3:-28962824 Msa1285150:CDS
TTGACGCTCGTTTCGTTGAT+AGG 0.300352 8_3:-28964393 Msa1285150:CDS
CGACTAGAAATTCGTTCTAT+AGG 0.309774 8_3:-28961257 Msa1285150:CDS
GCCGAATTCGATATTTCATT+TGG 0.311187 8_3:-28957595 Msa1285150:CDS
GCCAACTTCTTCATCTCCTT+TGG 0.320234 8_3:+28961029 None:intergenic
TGGACGTAGCTTTAATGATT+AGG 0.325944 8_3:-28953384 Msa1285150:three_prime_UTR
AAGAGTACAACCAGCTTTAG+AGG 0.344065 8_3:+28961517 None:intergenic
TCTGAACCAAATAAGATATA+AGG 0.346004 8_3:-28961489 Msa1285150:intron
GTTTATGTTGTGCAGAAGTT+AGG 0.361227 8_3:-28962038 Msa1285150:intron
TCCAAATGAAATATCGAATT+CGG 0.363933 8_3:+28957594 None:intergenic
TTCTTCAACATAAATGGAAC+TGG 0.368702 8_3:-28953404 Msa1285150:three_prime_UTR
CACCGGTTCGACCATTAAAC+TGG 0.379585 8_3:+28953244 None:intergenic
TCGAATTCGGCTACTTTGTA+AGG 0.385241 8_3:+28957607 None:intergenic
AAATAGAAGAGAAGAAGAAA+AGG 0.389477 8_3:+28964528 None:intergenic
AAAAGGTAGTGTTACAAGAT+TGG 0.397251 8_3:-28962801 Msa1285150:CDS
AAGTTTGGATGATAGATTGC+AGG 0.399633 8_3:-28953449 Msa1285150:three_prime_UTR
GATTGTGTTGTGAAAGAAAC+AGG 0.401283 8_3:+28964697 None:intergenic
AATGCAGCAAATGGGATTGC+AGG 0.404303 8_3:-28961582 Msa1285150:CDS
AGAGATTGGAATGCAGCAAA+TGG 0.404804 8_3:-28961591 Msa1285150:CDS
GACTAGAAATTCGTTCTATA+GGG 0.407782 8_3:-28961256 Msa1285150:CDS
ATAAATGTATAGGGAGAGAT+TGG 0.416100 8_3:-28961605 Msa1285150:intron
GTCCACGCAAATGAGATCTA+TGG 0.418614 8_3:+28961748 None:intergenic
GTTCACTTCAACTTCTGCTC+GGG 0.424046 8_3:+28961706 None:intergenic
TCGTATGTGAAAAGCTTGTT+TGG 0.444340 8_3:+28953547 None:intergenic
TAAACATATATCAATGGAAC+AGG 0.445063 8_3:+28953344 None:intergenic
AAAGGTAGTGTTACAAGATT+GGG 0.447335 8_3:-28962800 Msa1285150:CDS
CAAGCTTTGCGTAAGATGTC+TGG 0.449604 8_3:-28961545 Msa1285150:CDS
AAAGAGTGGAACTTCTTGAT+AGG 0.465867 8_3:+28964502 None:intergenic
CTGCAATAGCATGAAGTGCT+AGG 0.471959 8_3:+28962166 None:intergenic
CTTTGGTCGGGTAGTCGGAC+TGG 0.472038 8_3:-28953187 Msa1285150:three_prime_UTR
ATCGTGTGCCAACCCGATCA+TGG 0.484879 8_3:-28961933 Msa1285150:CDS
CAGACATCTTACGCAAAGCT+TGG 0.486162 8_3:+28961546 None:intergenic
GTCTAAAGCCAAACATCCAC+TGG 0.486365 8_3:+28962590 None:intergenic
TTGATTTCCGTTTAGGCCAA+AGG 0.486711 8_3:-28961045 Msa1285150:intron
GGTGATTAAACTGATGCCTT+TGG 0.487078 8_3:-28953204 Msa1285150:three_prime_UTR
AATAGAAGAGAAGAAGAAAA+GGG 0.490432 8_3:+28964529 None:intergenic
GCAGATCGTATGTGTAGATC+TGG 0.491077 8_3:-28961773 Msa1285150:CDS
GGTCGAACCGGTGATGCAAT+CGG 0.494322 8_3:-28953234 Msa1285150:three_prime_UTR
GGCTTTAGACTTTGCTTTAG+GGG 0.494730 8_3:-28962577 Msa1285150:CDS
AGTTCAACCGATTGCATCAC+CGG 0.496636 8_3:+28953227 None:intergenic
AAATTGATATGCAGGTAGTT+CGG 0.498228 8_3:-28953593 Msa1285150:intron
AGAGCCATCTCTCCATGATC+GGG 0.498479 8_3:+28961921 None:intergenic
GACCAGTTTAATGGTCGAAC+CGG 0.500688 8_3:-28953246 Msa1285150:three_prime_UTR
TTAAACTGATGCCTTTGGTC+GGG 0.504118 8_3:-28953199 Msa1285150:three_prime_UTR
TGACGCTCGTTTCGTTGATA+GGG 0.505105 8_3:-28964392 Msa1285150:intron
GTTACAAGATTGGGCAGTGC+TGG 0.511779 8_3:-28962791 Msa1285150:CDS
TCATGCTATTGCAGAAGTAC+AGG 0.512089 8_3:-28962157 Msa1285150:intron
CAAAGAGAGGACGCAAAGAG+TGG 0.513087 8_3:+28964488 None:intergenic
AAGAGCCATCTCTCCATGAT+CGG 0.515784 8_3:+28961920 None:intergenic
TCTATTCTAGCAAAAGGCAC+TGG 0.522048 8_3:-28962858 Msa1285150:intron
GCTTTAGACTTTGCTTTAGG+GGG 0.527215 8_3:-28962576 Msa1285150:CDS
TTCGATATTTCATTTGGAGA+GGG 0.528629 8_3:-28957589 Msa1285150:CDS
TGTTCACTTCAACTTCTGCT+CGG 0.531981 8_3:+28961705 None:intergenic
GGTGATGCAATCGGTTGAAC+TGG 0.532192 8_3:-28953225 Msa1285150:three_prime_UTR
GTGGTTTCAAAATGAAAGTG+TGG 0.533347 8_3:+28964551 None:intergenic
TATGTTGTGCAGAAGTTAGG+AGG 0.534157 8_3:-28962035 Msa1285150:intron
GAGATTGGAATGCAGCAAAT+GGG 0.536381 8_3:-28961590 Msa1285150:CDS
AAGGTAAAATTGAAATTCAA+AGG 0.536718 8_3:-28953283 Msa1285150:three_prime_UTR
GATGCCTTTGGTCGGGTAGT+CGG 0.537020 8_3:-28953192 Msa1285150:three_prime_UTR
TTTACATAAACATATATCAA+TGG 0.537292 8_3:+28953338 None:intergenic
GTTCGGTCTTCAATGAATGA+TGG 0.538565 8_3:-28953576 Msa1285150:CDS
TCTGGAAATGCCTCTAAAGC+TGG 0.543928 8_3:-28961527 Msa1285150:CDS
TGGTTTCAAAATGAAAGTGT+GGG 0.543933 8_3:+28964552 None:intergenic
TTCACATACGAAGAATAGTC+CGG 0.546219 8_3:-28953535 Msa1285150:CDS
TCGGGGAGTGAGAGCTGAGA+CGG 0.547108 8_3:+28961724 None:intergenic
CGCCATAGATCTCATTTGCG+TGG 0.560134 8_3:-28961750 Msa1285150:CDS
ATTCGATATTTCATTTGGAG+AGG 0.562710 8_3:-28957590 Msa1285150:CDS
TGCAATAGCATGAAGTGCTA+GGG 0.565048 8_3:+28962167 None:intergenic
GCCAAAGGAGATGAAGAAGT+TGG 0.567990 8_3:-28961030 Msa1285150:CDS
ATTAAACTGATGCCTTTGGT+CGG 0.568117 8_3:-28953200 Msa1285150:three_prime_UTR
TTCACTTCAACTTCTGCTCG+GGG 0.573704 8_3:+28961707 None:intergenic
CCTACCGCTTTAGAATATGC+TGG 0.575256 8_3:+28961975 None:intergenic
TCTTCGTCTTGATGAAGCAC+CGG 0.579039 8_3:+28953516 None:intergenic
ACAAGATTGGGCAGTGCTGG+TGG 0.580029 8_3:-28962788 Msa1285150:CDS
GAAGAAGAAGAAGCAAAGAG+AGG 0.585667 8_3:+28964475 None:intergenic
CCAACCCGATCATGGAGAGA+TGG 0.586050 8_3:-28961925 Msa1285150:CDS
AATCCAGAAGTGACAAGTGG+TGG 0.590086 8_3:-28961308 Msa1285150:CDS
TGGAGAGGGAGTCAATAAGC+TGG 0.603916 8_3:-28957575 Msa1285150:intron
AGAAGAGAAGAAGAAAAGGG+TGG 0.605737 8_3:+28964532 None:intergenic
CCAGCATATTCTAAAGCGGT+AGG 0.611416 8_3:-28961975 Msa1285150:CDS
CCATCTCTCCATGATCGGGT+TGG 0.615168 8_3:+28961925 None:intergenic
TGTAAGAGTGCAAAAGAGCA+AGG 0.621297 8_3:-28960995 Msa1285150:intron
TGATCCAGCATATTCTAAAG+CGG 0.621566 8_3:-28961979 Msa1285150:CDS
AATAGCATGAAGTGCTAGGG+TGG 0.629963 8_3:+28962170 None:intergenic
GGTTTCAAAATGAAAGTGTG+GGG 0.630517 8_3:+28964553 None:intergenic
TCCAAAAGGAAGAATTGTAG+AGG 0.632337 8_3:-28962547 Msa1285150:intron
TATTTGGACCAGAAAGCAGT+GGG 0.635930 8_3:-28962197 Msa1285150:CDS
AAGATTCAATGCGAACTCAA+CGG 0.646437 8_3:-28964433 Msa1285150:CDS
TTTGAAGAAAGTCTGTGATG+AGG 0.647381 8_3:-28953489 Msa1285150:exon
ATATTCTAAAGCGGTAGGAG+TGG 0.652399 8_3:-28961970 Msa1285150:CDS
CAGTCCGACTACCCGACCAA+AGG 0.666224 8_3:+28953188 None:intergenic
TCTAAAGCCAAACATCCACT+GGG 0.679556 8_3:+28962591 None:intergenic
GGAAATCCAGAAGTGACAAG+TGG 0.683852 8_3:-28961311 Msa1285150:CDS
ATATTTGGACCAGAAAGCAG+TGG 0.688023 8_3:-28962198 Msa1285150:CDS
GAAACGAGCGTCAAAATCAG+CGG 0.693261 8_3:+28964402 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATTTTAATGGATTAATT+TGG - chr8_3:28954756-28954775 Msa1285150:intron 10.0%
!!! TACTTTTATTGTATAATTTA+GGG - chr8_3:28956238-28956257 Msa1285150:intron 10.0%
!! AATATCAAAATTGTTTAATT+TGG - chr8_3:28956811-28956830 Msa1285150:intron 10.0%
!!! ATTATTTATAAGAGAATTTT+TGG - chr8_3:28957779-28957798 Msa1285150:intron 10.0%
!!! TTTAACATTTTCTTATAAAT+TGG + chr8_3:28957806-28957825 None:intergenic 10.0%
!! TTGTTTATGTTTATTAAATA+AGG - chr8_3:28958676-28958695 Msa1285150:intron 10.0%
!!! AATTATTTTGAAAAGATTTT+AGG - chr8_3:28958815-28958834 Msa1285150:intron 10.0%
!!! ATTATTTTGAAAAGATTTTA+GGG - chr8_3:28958816-28958835 Msa1285150:intron 10.0%
!!! GACTTTAAAATTAAAAAAAT+AGG + chr8_3:28959918-28959937 None:intergenic 10.0%
!!! TTGTTATTATAATTAAGATT+CGG - chr8_3:28959562-28959581 Msa1285150:intron 10.0%
!!! AACAATTAATTATTTTTTCT+TGG + chr8_3:28959707-28959726 None:intergenic 10.0%
!! AAGAAAAAATAATTAATTGT+TGG - chr8_3:28959706-28959725 Msa1285150:intron 10.0%
!! AGAAAAAATAATTAATTGTT+GGG - chr8_3:28959707-28959726 Msa1285150:intron 10.0%
!!! GACTTTAAAATTAAAAAAAT+AGG - chr8_3:28959918-28959937 Msa1285150:intron 10.0%
!! AAAAAAAAGAATTAAGTTAA+GGG - chr8_3:28960008-28960027 Msa1285150:intron 10.0%
!! AAAATGAAAATTCAAAATAA+TGG + chr8_3:28960388-28960407 None:intergenic 10.0%
!!! AATAATAAATACTTTTGAAA+TGG + chr8_3:28961672-28961691 None:intergenic 10.0%
!!! TCTTGTTATTTTTTGAAAAA+TGG - chr8_3:28953296-28953315 Msa1285150:three_prime_UTR 15.0%
!!! TATTTTTTGAAAAATGGATT+TGG - chr8_3:28953302-28953321 Msa1285150:three_prime_UTR 15.0%
!!! TTGTTGTTTGTTATATAATT+TGG - chr8_3:28954607-28954626 Msa1285150:intron 15.0%
!!! AATTTTAATTTTTGCTCTAT+TGG - chr8_3:28954838-28954857 Msa1285150:intron 15.0%
!!! AGATAATTGTTTTAGAAAAT+AGG - chr8_3:28954921-28954940 Msa1285150:intron 15.0%
!! AAATAACCTACTATATTTAT+TGG + chr8_3:28954958-28954977 None:intergenic 15.0%
!!! TTATTTGTTACATTGTTAAT+GGG - chr8_3:28954972-28954991 Msa1285150:intron 15.0%
!!! TTCTAAGCAAAATAATTTTA+GGG - chr8_3:28955459-28955478 Msa1285150:intron 15.0%
!! AATCAAAAATAAATGGAATT+GGG + chr8_3:28955584-28955603 None:intergenic 15.0%
!! AAATCAAAAATAAATGGAAT+TGG + chr8_3:28955585-28955604 None:intergenic 15.0%
!! ATCACAAAATCAAAAATAAA+TGG + chr8_3:28955591-28955610 None:intergenic 15.0%
!!! ATAAATTGATAATTATCATC+AGG + chr8_3:28955803-28955822 None:intergenic 15.0%
!!! GTACTTTTATTGTATAATTT+AGG - chr8_3:28956237-28956256 Msa1285150:intron 15.0%
!!! ACTTTTATTGTATAATTTAG+GGG - chr8_3:28956239-28956258 Msa1285150:intron 15.0%
!! TATTATAATCGAAAGATATT+GGG + chr8_3:28956795-28956814 None:intergenic 15.0%
!! ATATTATAATCGAAAGATAT+TGG + chr8_3:28956796-28956815 None:intergenic 15.0%
!! TTTCAGATATATAAATATTG+TGG + chr8_3:28956929-28956948 None:intergenic 15.0%
!! AATTTATAAAACTTGTAGTA+AGG - chr8_3:28957014-28957033 Msa1285150:intron 15.0%
!! GAGAAGAATAAAAATAATTA+TGG - chr8_3:28957256-28957275 Msa1285150:intron 15.0%
!! TTTACTATTTACTTAGAATT+AGG + chr8_3:28957678-28957697 None:intergenic 15.0%
!! TCTAAGTAAATAGTAAAATT+AGG - chr8_3:28957681-28957700 Msa1285150:intron 15.0%
!! AATTAGTAGTATAGAAATTA+AGG - chr8_3:28957721-28957740 Msa1285150:intron 15.0%
!! AATTCTCTTATAAATAATAC+CGG + chr8_3:28957777-28957796 None:intergenic 15.0%
!!! CTCAAAAAATAAATCAATTT+TGG - chr8_3:28958890-28958909 Msa1285150:intron 15.0%
!! GAAAAAAAGAATTAAGTTAA+GGG + chr8_3:28958934-28958953 None:intergenic 15.0%
!!! TTGAAACTTTTAATAGTTAA+GGG + chr8_3:28959977-28959996 None:intergenic 15.0%
!!! TTTGAAACTTTTAATAGTTA+AGG + chr8_3:28959976-28959995 None:intergenic 15.0%
!! AACTATTAAAAGTTTCAAAA+TGG - chr8_3:28958967-28958986 Msa1285150:intron 15.0%
!!! AAATAATTGGAGTATTTTAT+TGG - chr8_3:28959249-28959268 Msa1285150:intron 15.0%
!! TGTTATTATAATTAAGATTC+GGG - chr8_3:28959563-28959582 Msa1285150:intron 15.0%
!!! TTATTTTTTCTTGGAAAATT+TGG + chr8_3:28959698-28959717 None:intergenic 15.0%
!! AACTATTAAAAGTTTCAAAA+TGG + chr8_3:28958967-28958986 None:intergenic 15.0%
!!! TTTGAAACTTTTAATAGTTA+AGG - chr8_3:28959976-28959995 Msa1285150:intron 15.0%
!!! TTGAAACTTTTAATAGTTAA+GGG - chr8_3:28959977-28959996 Msa1285150:intron 15.0%
!!! CTTAATTCTTTTTTTTGAAT+TGG + chr8_3:28960004-28960023 None:intergenic 15.0%
!! CAAAAAAAAGAATTAAGTTA+AGG - chr8_3:28960007-28960026 Msa1285150:intron 15.0%
!!! TTTTCTATTTATTTAGGATT+AGG + chr8_3:28961334-28961353 None:intergenic 15.0%
!! TCCTAAATAAATAGAAAATT+AGG - chr8_3:28961336-28961355 Msa1285150:intron 15.0%
!!! TCCTAATTTTCTATTTATTT+AGG + chr8_3:28961340-28961359 None:intergenic 15.0%
!! ATAATAATAGCTAAGTATTA+TGG - chr8_3:28961368-28961387 Msa1285150:intron 15.0%
!! ATAAAATACTGAAACAATAT+TGG + chr8_3:28962299-28962318 None:intergenic 15.0%
!! TTAAAAAGTAACGTTTATAT+AGG + chr8_3:28963390-28963409 None:intergenic 15.0%
!!! TATTTGATTTCTTATTTCTT+TGG - chr8_3:28963836-28963855 Msa1285150:intron 15.0%
!!! ATTTGATTTCTTATTTCTTT+GGG - chr8_3:28963837-28963856 Msa1285150:intron 15.0%
!!! TTTGTTTGTTTTCATAAAAA+CGG - chr8_3:28964104-28964123 Msa1285150:intron 15.0%
!! TATTAGAAATCATATAGTAA+AGG - chr8_3:28964276-28964295 Msa1285150:intron 15.0%
!! TTTACATAAACATATATCAA+TGG + chr8_3:28964560-28964579 None:intergenic 15.0%
!! GGATGACAAATTAAAAATTT+GGG + chr8_3:28953972-28953991 None:intergenic 20.0%
!! AGGATGACAAATTAAAAATT+TGG + chr8_3:28953973-28953992 None:intergenic 20.0%
!!! TCATCCTTTTTTATTTTTTC+TGG - chr8_3:28953986-28954005 Msa1285150:intron 20.0%
!! CAAACCAGAAAAAATAAAAA+AGG + chr8_3:28953993-28954012 None:intergenic 20.0%
!!! TAATTTTAGATCTCTTTTGA+TGG + chr8_3:28954392-28954411 None:intergenic 20.0%
!! AAAATTAAAATGTTGACCTA+TGG - chr8_3:28954405-28954424 Msa1285150:intron 20.0%
!!! TTAGACAAATTTTATAAAGC+GGG + chr8_3:28954562-28954581 None:intergenic 20.0%
!!! CTTAGACAAATTTTATAAAG+CGG + chr8_3:28954563-28954582 None:intergenic 20.0%
!! CTTTATAAAATTTGTCTAAG+TGG - chr8_3:28954563-28954582 Msa1285150:intron 20.0%
!! AACAAACAACAAATAATGAA+GGG + chr8_3:28954599-28954618 None:intergenic 20.0%
!! TAACAAACAACAAATAATGA+AGG + chr8_3:28954600-28954619 None:intergenic 20.0%
!!! TATAATTTGGTTAGTCAATA+TGG - chr8_3:28954620-28954639 Msa1285150:intron 20.0%
!!! ATGTGCATATGATAATTTTT+TGG - chr8_3:28954723-28954742 Msa1285150:intron 20.0%
!! AGTATACCAATAAATATAGT+AGG - chr8_3:28954949-28954968 Msa1285150:intron 20.0%
!!! GTTATTTGTTACATTGTTAA+TGG - chr8_3:28954971-28954990 Msa1285150:intron 20.0%
!!! AATGATATAAACAACTCTTT+TGG - chr8_3:28955071-28955090 Msa1285150:intron 20.0%
!!! CTAAAATTATTTTGCTTAGA+AGG + chr8_3:28955460-28955479 None:intergenic 20.0%
!!! CTTCTAAGCAAAATAATTTT+AGG - chr8_3:28955458-28955477 Msa1285150:intron 20.0%
!!! TCTAAGCAAAATAATTTTAG+GGG - chr8_3:28955460-28955479 Msa1285150:intron 20.0%
!!! AAATAATTTTAGGGGAAATT+TGG - chr8_3:28955468-28955487 Msa1285150:intron 20.0%
!!! GTTTGGATTTAAAATGAATT+TGG + chr8_3:28955538-28955557 None:intergenic 20.0%
!! TTAACGATTAGATTAATGTT+TGG + chr8_3:28955555-28955574 None:intergenic 20.0%
!! ATTGAAGTATAAATAAGTAG+AGG + chr8_3:28955642-28955661 None:intergenic 20.0%
!! TCTACTTATTTATACTTCAA+TGG - chr8_3:28955641-28955660 Msa1285150:intron 20.0%
!! CTACTTATTTATACTTCAAT+GGG - chr8_3:28955642-28955661 Msa1285150:intron 20.0%
!! TTTAAGCAATTACTAATAGA+TGG + chr8_3:28956471-28956490 None:intergenic 20.0%
!!! TTCTTTTTACTTTTGTAGAT+TGG - chr8_3:28956551-28956570 Msa1285150:intron 20.0%
!!! TGTAAAAAGTACTGATATTT+TGG + chr8_3:28956754-28956773 None:intergenic 20.0%
!! TGTAAATAAGTTTATAAGGT+GGG + chr8_3:28957072-28957091 None:intergenic 20.0%
!! ACTTATATACCTATAAATAG+GGG + chr8_3:28957653-28957672 None:intergenic 20.0%
!! GACTTATATACCTATAAATA+GGG + chr8_3:28957654-28957673 None:intergenic 20.0%
!! AGACTTATATACCTATAAAT+AGG + chr8_3:28957655-28957674 None:intergenic 20.0%
!!! AGAAAATGTTAAAGCTTTTA+AGG - chr8_3:28957813-28957832 Msa1285150:intron 20.0%
!! AAACCAAACAAAAATGATAT+TGG - chr8_3:28958205-28958224 Msa1285150:intron 20.0%
!! AACCAAACAAAAATGATATT+GGG - chr8_3:28958206-28958225 Msa1285150:intron 20.0%
!!! TTTTTGAGTTTACATAAAAC+TGG + chr8_3:28958878-28958897 None:intergenic 20.0%
!! CGAAAAAAAGAATTAAGTTA+AGG + chr8_3:28958935-28958954 None:intergenic 20.0%
!!! CTTAATTCTTTTTTTCGAAT+TGG - chr8_3:28958938-28958957 Msa1285150:intron 20.0%
!! AAGTAATATAAATTACGTGT+TGG + chr8_3:28959841-28959860 None:intergenic 20.0%
!!! TAAATCATGAATGTTGATAA+TGG + chr8_3:28959161-28959180 None:intergenic 20.0%
!! ATAAAATAAGTGTGTGAATT+GGG + chr8_3:28959523-28959542 None:intergenic 20.0%
!! AAGTAATATAAATTACGTGT+TGG - chr8_3:28959841-28959860 Msa1285150:intron 20.0%
!!! ATTTTCAAAAGCTAAAACAA+GGG - chr8_3:28960079-28960098 Msa1285150:intron 20.0%
!! CTGAAGATTAATCAAAATAT+TGG - chr8_3:28960158-28960177 Msa1285150:intron 20.0%
!!! GTTGTCTTAATTTTTTATTG+TGG - chr8_3:28960228-28960247 Msa1285150:intron 20.0%
!! ATGAATATTGTCTTAAAGAA+GGG - chr8_3:28960443-28960462 Msa1285150:intron 20.0%
!! CAATTATGATAATAAATCTG+TGG - chr8_3:28960789-28960808 Msa1285150:intron 20.0%
!! TAAAAATGAAAACTACTCTT+AGG + chr8_3:28961511-28961530 None:intergenic 20.0%
!! TCTTAATCCTAAATAAATAG+AGG + chr8_3:28961561-28961580 None:intergenic 20.0%
!! TCTTCTATATCTATAAATAG+AGG - chr8_3:28961582-28961601 Msa1285150:CDS 20.0%
!!! ATACTTTTTTACCTTTGTTA+CGG - chr8_3:28961883-28961902 Msa1285150:intron 20.0%
!! TGTCACTATTGTATTTATAA+TGG + chr8_3:28962550-28962569 None:intergenic 20.0%
!!! TTTGTTCTTGATATGTTTTT+GGG - chr8_3:28962882-28962901 Msa1285150:intron 20.0%
!!! AGTTATATTTTCTCTAGAAA+GGG - chr8_3:28962918-28962937 Msa1285150:intron 20.0%
!! AAAATTAACTAAATCAGCAT+TGG + chr8_3:28963643-28963662 None:intergenic 20.0%
!!! TTTAGTTAATTTTGCCATTT+TGG - chr8_3:28963650-28963669 Msa1285150:intron 20.0%
!!! TTGTTTGTTTTCATAAAAAC+GGG - chr8_3:28964105-28964124 Msa1285150:intron 20.0%
!!! GTTATCTAAGTAATTAGTTT+AGG - chr8_3:28964127-28964146 Msa1285150:intron 20.0%
!!! GTTAATTTTTCTGATAAGTT+TGG - chr8_3:28964431-28964450 Msa1285150:CDS 20.0%
!! TATTCTTTCTTCAACATAAA+TGG - chr8_3:28964485-28964504 Msa1285150:CDS 20.0%
!! AAGGTAAAATTGAAATTCAA+AGG - chr8_3:28964612-28964631 Msa1285150:five_prime_UTR 20.0%
! AATAGAAGAGAAGAAGAAAA+GGG + chr8_3:28953369-28953388 None:intergenic 25.0%
! AAATAGAAGAGAAGAAGAAA+AGG + chr8_3:28953370-28953389 None:intergenic 25.0%
! AGAAAAGTAAAAGAGAAAAG+GGG + chr8_3:28953536-28953555 None:intergenic 25.0%
! CAGAAAAGTAAAAGAGAAAA+GGG + chr8_3:28953537-28953556 None:intergenic 25.0%
! TACTGAATATAGAAAAGAGA+AGG - chr8_3:28954015-28954034 Msa1285150:intron 25.0%
! ACACACAAATCATATATTAG+AGG - chr8_3:28954177-28954196 Msa1285150:intron 25.0%
! AACATATTTGAGAGAAAGTT+GGG - chr8_3:28954212-28954231 Msa1285150:intron 25.0%
! AGTTCTCATTATAGACAAAA+TGG - chr8_3:28954237-28954256 Msa1285150:intron 25.0%
! ATATGTAATCATATGACAGA+AGG + chr8_3:28954647-28954666 None:intergenic 25.0%
! TATGATTACATATTTCCACT+TGG - chr8_3:28954654-28954673 Msa1285150:intron 25.0%
!! GTTCAATCTTTGTTATGAAA+TGG - chr8_3:28954894-28954913 Msa1285150:intron 25.0%
! TGAATTTCTATTCTAGCAAA+AGG - chr8_3:28955031-28955050 Msa1285150:intron 25.0%
!!! ATAAACAACTCTTTTGGAAA+AGG - chr8_3:28955077-28955096 Msa1285150:intron 25.0%
! TATATCTGTTTCCAGATATT+TGG - chr8_3:28955682-28955701 Msa1285150:intron 25.0%
! ATCATCAGGAATTAATGATT+GGG + chr8_3:28955789-28955808 None:intergenic 25.0%
! TATCATCAGGAATTAATGAT+TGG + chr8_3:28955790-28955809 None:intergenic 25.0%
!!! TGGAATGGATTAGATAATTT+TGG - chr8_3:28956028-28956047 Msa1285150:intron 25.0%
!!! AATGGATTAGATAATTTTGG+CGG - chr8_3:28956031-28956050 Msa1285150:intron 25.0%
!!! TGTCTTTCTTTCTTTGTTTT+AGG - chr8_3:28956215-28956234 Msa1285150:intron 25.0%
! TCTGAACCAAATAAGATATA+AGG - chr8_3:28956406-28956425 Msa1285150:intron 25.0%
! CAAGTACCTTATATCTTATT+TGG + chr8_3:28956415-28956434 None:intergenic 25.0%
! AGATTGCATGCATTTAATTA+TGG - chr8_3:28956442-28956461 Msa1285150:intron 25.0%
! GATTGCATGCATTTAATTAT+GGG - chr8_3:28956443-28956462 Msa1285150:intron 25.0%
! AAGGAAAATTAGTAACAGAA+AGG + chr8_3:28956725-28956744 None:intergenic 25.0%
! TGATGAAAAAACAACACAAA+AGG + chr8_3:28956957-28956976 None:intergenic 25.0%
! AAAAGTTTGTGAATAATGCA+TGG + chr8_3:28956981-28957000 None:intergenic 25.0%
! GTAAATAAGTTTATAAGGTG+GGG + chr8_3:28957071-28957090 None:intergenic 25.0%
! CTGTAAATAAGTTTATAAGG+TGG + chr8_3:28957073-28957092 None:intergenic 25.0%
! CACCTTATAAACTTATTTAC+AGG - chr8_3:28957071-28957090 Msa1285150:intron 25.0%
! TGATACTATGTTGAAGTTAT+GGG - chr8_3:28957217-28957236 Msa1285150:intron 25.0%
!! TTTTCTCTCTTTATTCAACA+TGG - chr8_3:28957498-28957517 Msa1285150:intron 25.0%
! AAAAGACAACGTATTAAATG+AGG + chr8_3:28957869-28957888 None:intergenic 25.0%
!!! GTTGTCTTTTTCATATTACT+GGG - chr8_3:28957879-28957898 Msa1285150:intron 25.0%
! AAAACAATAAATGAGCTCAT+AGG - chr8_3:28957952-28957971 Msa1285150:intron 25.0%
! TTATCTCTAATAATTGAGAC+CGG - chr8_3:28957986-28958005 Msa1285150:intron 25.0%
! TAGACATATACTTTCAAAAG+AGG - chr8_3:28958095-28958114 Msa1285150:intron 25.0%
! AAGACAAACATATAGTCATT+TGG - chr8_3:28958472-28958491 Msa1285150:intron 25.0%
!! TTTTGTACTTTATCCTCTAA+AGG - chr8_3:28958605-28958624 Msa1285150:intron 25.0%
! TTTGTACTTTATCCTCTAAA+GGG - chr8_3:28958606-28958625 Msa1285150:intron 25.0%
! ACAAAAAAGCTGAAACAATA+AGG + chr8_3:28958716-28958735 None:intergenic 25.0%
! TGACCAACAAAAAAATGAAT+TGG - chr8_3:28958782-28958801 Msa1285150:intron 25.0%
!!! CAACCAATTCATTTTTTTGT+TGG + chr8_3:28958788-28958807 None:intergenic 25.0%
! TATATGAAGAAGATGAAGAT+GGG + chr8_3:28959805-28959824 None:intergenic 25.0%
! TTATATGAAGAAGATGAAGA+TGG + chr8_3:28959804-28959823 None:intergenic 25.0%
!! GTTTGATTCATGATTTTTCT+GGG + chr8_3:28959754-28959773 None:intergenic 25.0%
!! AGCCAATCATCTAAAATAAT+TGG - chr8_3:28959236-28959255 Msa1285150:intron 25.0%
!!! CTCCAATTATTTTAGATGAT+TGG + chr8_3:28959241-28959260 None:intergenic 25.0%
!!! AAGTTGATGAAATTTGGTAA+CGG + chr8_3:28959455-28959474 None:intergenic 25.0%
!!! AGTAACAAGTTGATGAAATT+TGG + chr8_3:28959461-28959480 None:intergenic 25.0%
! GATAAAATAAGTGTGTGAAT+TGG + chr8_3:28959524-28959543 None:intergenic 25.0%
!! TTTTCTTGGAAAATTTGGAA+AGG + chr8_3:28959693-28959712 None:intergenic 25.0%
!!! TTTTTGTGTTTGTTAGTTGT+TGG - chr8_3:28959731-28959750 Msa1285150:intron 25.0%
!!! TTTTGTGTTTGTTAGTTGTT+GGG - chr8_3:28959732-28959751 Msa1285150:intron 25.0%
!! GTTTGATTCATGATTTTTCT+AGG - chr8_3:28959754-28959773 Msa1285150:intron 25.0%
!! TAATTCATGAATGTTGATGA+TGG - chr8_3:28959781-28959800 Msa1285150:intron 25.0%
! TTATATGAAGAAGATGAAGA+TGG - chr8_3:28959804-28959823 Msa1285150:intron 25.0%
! TATATGAAGAAGATGAAGAT+GGG - chr8_3:28959805-28959824 Msa1285150:intron 25.0%
! TGATGGCTTAATTAATCATT+TGG + chr8_3:28960035-28960054 None:intergenic 25.0%
!!! CTTTTGAAAATGTGATTTCA+AGG + chr8_3:28960070-28960089 None:intergenic 25.0%
!! CATTTTCAAAAGCTAAAACA+AGG - chr8_3:28960078-28960097 Msa1285150:intron 25.0%
!!! GTCTTAATTTTTTATTGTGG+AGG - chr8_3:28960231-28960250 Msa1285150:intron 25.0%
! TCCAAATGAAATATCGAATT+CGG + chr8_3:28960304-28960323 None:intergenic 25.0%
!!! TGAATTTTCATTTTGATTGC+AGG - chr8_3:28960394-28960413 Msa1285150:intron 25.0%
!!! GAATTTTCATTTTGATTGCA+GGG - chr8_3:28960395-28960414 Msa1285150:intron 25.0%
! GATGAATATTGTCTTAAAGA+AGG - chr8_3:28960442-28960461 Msa1285150:intron 25.0%
! CAATTATAGCAATCATTCAT+TGG - chr8_3:28960696-28960715 Msa1285150:intron 25.0%
! ATTATTGTAGTTGCATGATA+TGG - chr8_3:28960880-28960899 Msa1285150:intron 25.0%
! AACAGAATAAAAAAGAAACG+CGG + chr8_3:28961022-28961041 None:intergenic 25.0%
! TGTGGATTCGTTATAAAATA+AGG + chr8_3:28961697-28961716 None:intergenic 25.0%
! CACATGAAAATTATACAACA+GGG + chr8_3:28962117-28962136 None:intergenic 25.0%
! CAAATTAGAATGATAAACTG+AGG + chr8_3:28962192-28962211 None:intergenic 25.0%
! CTCAGTTTATCATTCTAATT+TGG - chr8_3:28962190-28962209 Msa1285150:CDS 25.0%
! ACAGATTCTTAATTCTAACA+AGG + chr8_3:28962453-28962472 None:intergenic 25.0%
! AACATCATACAAACTCTATA+TGG - chr8_3:28962585-28962604 Msa1285150:CDS 25.0%
! TGGTAGTAACTTTATATTTG+GGG + chr8_3:28962744-28962763 None:intergenic 25.0%
! CTGGTAGTAACTTTATATTT+GGG + chr8_3:28962745-28962764 None:intergenic 25.0%
!! GTTTGTTCTTGATATGTTTT+TGG - chr8_3:28962881-28962900 Msa1285150:intron 25.0%
!!! GAGTTATATTTTCTCTAGAA+AGG - chr8_3:28962917-28962936 Msa1285150:intron 25.0%
!! AAGAATTTAAGACACTATCT+TGG - chr8_3:28962992-28963011 Msa1285150:intron 25.0%
! TATATGGAAGTAGACAATTT+AGG + chr8_3:28963044-28963063 None:intergenic 25.0%
! AATACTAACTCCAAGTTATA+TGG + chr8_3:28963060-28963079 None:intergenic 25.0%
! AAAGTAACGTTTATATAGGT+GGG + chr8_3:28963386-28963405 None:intergenic 25.0%
! AAAAGTAACGTTTATATAGG+TGG + chr8_3:28963387-28963406 None:intergenic 25.0%
!! TTTTCTATTTGGTATAAGAG+AGG - chr8_3:28963472-28963491 Msa1285150:intron 25.0%
! TTAATATCATTTGCTTTCCA+GGG - chr8_3:28964076-28964095 Msa1285150:intron 25.0%
! AAAGGATTAAATTGATATGC+AGG - chr8_3:28964294-28964313 Msa1285150:intron 25.0%
! TAAACATATATCAATGGAAC+AGG + chr8_3:28964554-28964573 None:intergenic 25.0%
! AAGCATAGAAACAAAAAGAA+AGG - chr8_3:28964593-28964612 Msa1285150:exon 25.0%
! TGGTTTCAAAATGAAAGTGT+GGG + chr8_3:28953346-28953365 None:intergenic 30.0%
GCAGAAAAGTAAAAGAGAAA+AGG + chr8_3:28953538-28953557 None:intergenic 30.0%
!! CAGTTTTACTAGTTTAGATG+TGG - chr8_3:28953633-28953652 Msa1285150:intron 30.0%
! GTTTCTTTTTCTCGAATTGA+TGG - chr8_3:28953672-28953691 Msa1285150:intron 30.0%
AACAGGGATCAATTGTTAAT+CGG - chr8_3:28953857-28953876 Msa1285150:intron 30.0%
! TTGTTCATATTTTACCCAAC+AGG - chr8_3:28953892-28953911 Msa1285150:intron 30.0%
GAACATATTTGAGAGAAAGT+TGG - chr8_3:28954211-28954230 Msa1285150:intron 30.0%
! AAATGGTAGAGTTTTTCCTT+AGG - chr8_3:28954254-28954273 Msa1285150:intron 30.0%
ATTTGTCTAAGTGGAATCTT+TGG - chr8_3:28954572-28954591 Msa1285150:intron 30.0%
! CATTTTGTCTTTTTTCCAAG+TGG + chr8_3:28954672-28954691 None:intergenic 30.0%
AAAATGCACTAGAAGATTGA+TGG - chr8_3:28954686-28954705 Msa1285150:intron 30.0%
AAAAGGTAGTGTTACAAGAT+TGG - chr8_3:28955094-28955113 Msa1285150:intron 30.0%
AAAGGTAGTGTTACAAGATT+GGG - chr8_3:28955095-28955114 Msa1285150:intron 30.0%
AATGCAAATAAGTTCAGCAA+AGG + chr8_3:28955407-28955426 None:intergenic 30.0%
TGAACTTATTTGCATTCTCT+GGG - chr8_3:28955411-28955430 Msa1285150:intron 30.0%
CAGTGAGTTTGAAAAAATCA+CGG - chr8_3:28955496-28955515 Msa1285150:intron 30.0%
ATAAATGTATAGGGAGAGAT+TGG - chr8_3:28956290-28956309 Msa1285150:intron 30.0%
AGAAACAAGAGATTTAACAG+TGG + chr8_3:28956514-28956533 None:intergenic 30.0%
!! ATCTCTTGTTTCTGTTTACA+TGG - chr8_3:28956521-28956540 Msa1285150:intron 30.0%
! TTGTAGATTGGTGTCTATTA+TGG - chr8_3:28956563-28956582 Msa1285150:intron 30.0%
GACTAGAAATTCGTTCTATA+GGG - chr8_3:28956639-28956658 Msa1285150:intron 30.0%
GATAAAGTCTGTAAGTACAA+TGG - chr8_3:28956664-28956683 Msa1285150:intron 30.0%
!!! ACTGATATTTTGGAGTAGAA+AGG + chr8_3:28956744-28956763 None:intergenic 30.0%
ATAAAACTTGTAGTAAGGCA+TGG - chr8_3:28957019-28957038 Msa1285150:intron 30.0%
GGCCTGTAAATAAGTTTATA+AGG + chr8_3:28957076-28957095 None:intergenic 30.0%
AATAATGATACCACATGTCA+CGG - chr8_3:28957177-28957196 Msa1285150:intron 30.0%
AACTTCAACATAGTATCAGA+GGG + chr8_3:28957215-28957234 None:intergenic 30.0%
TAACTTCAACATAGTATCAG+AGG + chr8_3:28957216-28957235 None:intergenic 30.0%
CTGATACTATGTTGAAGTTA+TGG - chr8_3:28957216-28957235 Msa1285150:intron 30.0%
CTCCTATATAATAAACCTTC+CGG - chr8_3:28957438-28957457 Msa1285150:intron 30.0%
TACCGGAAGGTTTATTATAT+AGG + chr8_3:28957443-28957462 None:intergenic 30.0%
TAACACTAACCCCTATTTAT+AGG - chr8_3:28957641-28957660 Msa1285150:intron 30.0%
! GGGAGTATATTATAGTATCT+TGG + chr8_3:28957752-28957771 None:intergenic 30.0%
TCTTATAAATAATACCGGAG+GGG + chr8_3:28957772-28957791 None:intergenic 30.0%
CTCTTATAAATAATACCGGA+GGG + chr8_3:28957773-28957792 None:intergenic 30.0%
TCTCTTATAAATAATACCGG+AGG + chr8_3:28957774-28957793 None:intergenic 30.0%
!! CGTTGTCTTTTTCATATTAC+TGG - chr8_3:28957878-28957897 Msa1285150:intron 30.0%
! ATGTCTCACAATTTTCCATA+AGG - chr8_3:28957910-28957929 Msa1285150:intron 30.0%
! TGTCTCACAATTTTCCATAA+GGG - chr8_3:28957911-28957930 Msa1285150:intron 30.0%
! GTTTTACACATATACCCTTA+TGG + chr8_3:28957928-28957947 None:intergenic 30.0%
!! CCTTTAAGTTTTTGCTTGAA+AGG + chr8_3:28958062-28958081 None:intergenic 30.0%
CCTTTCAAGCAAAAACTTAA+AGG - chr8_3:28958059-28958078 Msa1285150:intron 30.0%
GTTGATTGATTGTTTGTTCT+AGG + chr8_3:28958145-28958164 None:intergenic 30.0%
!! AGCCCAATATCATTTTTGTT+TGG + chr8_3:28958211-28958230 None:intergenic 30.0%
!!! ACTTTTAAGTTGGTTACTTC+AGG + chr8_3:28958248-28958267 None:intergenic 30.0%
TGAAGTAACCAACTTAAAAG+TGG - chr8_3:28958247-28958266 Msa1285150:intron 30.0%
!!! GTCACACTTTTTTTTTTGTG+TGG - chr8_3:28958275-28958294 Msa1285150:intron 30.0%
!!! CTCTCTTATTTTGGTTGTTT+CGG + chr8_3:28958347-28958366 None:intergenic 30.0%
AAACAACCAAAATAAGAGAG+AGG - chr8_3:28958347-28958366 Msa1285150:intron 30.0%
!! AATTTGACTCCTCTAAAATG+AGG + chr8_3:28958637-28958656 None:intergenic 30.0%
AAACAATCTAATGCAATGTG+AGG + chr8_3:28958662-28958681 None:intergenic 30.0%
!! AAATCACTTTTGACAACTGA+TGG - chr8_3:28958743-28958762 Msa1285150:intron 30.0%
GTTTACATAAAACTGGCATA+AGG + chr8_3:28958871-28958890 None:intergenic 30.0%
TGATGACTACAACAAAGATA+AGG + chr8_3:28959948-28959967 None:intergenic 30.0%
! CTTTGTTGTAGTCATCAATT+TGG - chr8_3:28958997-28959016 Msa1285150:intron 30.0%
! GGTTTGATTCATGATTTTTC+TGG + chr8_3:28959753-28959772 None:intergenic 30.0%
! TTTTGTGTATGTTAGTTGCT+GGG + chr8_3:28959210-28959229 None:intergenic 30.0%
! TTTTTGTGTATGTTAGTTGC+TGG + chr8_3:28959211-28959230 None:intergenic 30.0%
TTAATGAAAGAGGGGTAAAA+AGG + chr8_3:28959331-28959350 None:intergenic 30.0%
AGTGTGGATAACAAAAGTTT+CGG + chr8_3:28959404-28959423 None:intergenic 30.0%
TATAATTAAGATTCGGGTGT+AGG - chr8_3:28959569-28959588 Msa1285150:intron 30.0%
ATAATTAAGATTCGGGTGTA+GGG - chr8_3:28959570-28959589 Msa1285150:intron 30.0%
TTCGATTCTGCTACAAAATA+AGG + chr8_3:28959609-28959628 None:intergenic 30.0%
! CTTTGTTGTAGTCATCAATT+TGG + chr8_3:28958997-28959016 None:intergenic 30.0%
TGATGACTACAACAAAGATA+AGG - chr8_3:28959948-28959967 Msa1285150:intron 30.0%
!! CTAACTTGAGAAGTTGTTTT+AGG - chr8_3:28960257-28960276 Msa1285150:intron 30.0%
ATTCGATATTTCATTTGGAG+AGG - chr8_3:28960305-28960324 Msa1285150:intron 30.0%
TTCGATATTTCATTTGGAGA+GGG - chr8_3:28960306-28960325 Msa1285150:intron 30.0%
CTAATTTGATCTCTGCTATA+TGG + chr8_3:28960820-28960839 None:intergenic 30.0%
TAGCAGAGATCAAATTAGAT+AGG - chr8_3:28960822-28960841 Msa1285150:intron 30.0%
TTGAAATGTAAACAGTGTCT+AGG + chr8_3:28960925-28960944 None:intergenic 30.0%
AATAAAAAAGAAACGCGGAA+GGG + chr8_3:28961017-28961036 None:intergenic 30.0%
CATTGAGACACAAAATGAAA+AGG + chr8_3:28961080-28961099 None:intergenic 30.0%
! CTTTTCATTTTGTGTCTCAA+TGG - chr8_3:28961078-28961097 Msa1285150:intron 30.0%
GATGATCAACATTAAGACAT+GGG + chr8_3:28961131-28961150 None:intergenic 30.0%
ATCCAAATCTATCTTGAAAC+AGG - chr8_3:28961148-28961167 Msa1285150:intron 30.0%
AACCTGTTTCAAGATAGATT+TGG + chr8_3:28961153-28961172 None:intergenic 30.0%
AATCTATCTTGAAACAGGTT+AGG - chr8_3:28961153-28961172 Msa1285150:intron 30.0%
! TCTTCTAGAAGAAGTTGAAA+AGG - chr8_3:28961221-28961240 Msa1285150:intron 30.0%
ATAAGTCTATAGCATATAGC+AGG + chr8_3:28961261-28961280 None:intergenic 30.0%
! CACTAACCTCTTATTTATAG+AGG - chr8_3:28961299-28961318 Msa1285150:CDS 30.0%
CTTGTACCTCTATAAATAAG+AGG + chr8_3:28961308-28961327 None:intergenic 30.0%
GTATTATGGAACTAAATCCT+AGG - chr8_3:28961382-28961401 Msa1285150:intron 30.0%
!! TGTTCTAGAAATTATCTCCT+AGG + chr8_3:28961402-28961421 None:intergenic 30.0%
! TATGTTAATGACAGAGTATC+TGG - chr8_3:28961477-28961496 Msa1285150:intron 30.0%
! ATGTTAATGACAGAGTATCT+GGG - chr8_3:28961478-28961497 Msa1285150:intron 30.0%
GTTCCAAACATTCAAGAAAA+GGG + chr8_3:28961780-28961799 None:intergenic 30.0%
AGTTCCAAACATTCAAGAAA+AGG + chr8_3:28961781-28961800 None:intergenic 30.0%
CCAACACATATACAACTATT+GGG + chr8_3:28962024-28962043 None:intergenic 30.0%
CCAATAGTTGTATATGTGTT+GGG - chr8_3:28962022-28962041 Msa1285150:CDS 30.0%
CCACATGAAAATTATACAAC+AGG + chr8_3:28962118-28962137 None:intergenic 30.0%
! CCTGTTGTATAATTTTCATG+TGG - chr8_3:28962115-28962134 Msa1285150:intron 30.0%
TAGAATGATAAACTGAGGTT+TGG + chr8_3:28962187-28962206 None:intergenic 30.0%
AAAGATACTAAAACAGAAGG+TGG + chr8_3:28962249-28962268 None:intergenic 30.0%
CCTAAAGATACTAAAACAGA+AGG + chr8_3:28962252-28962271 None:intergenic 30.0%
!!! CCTTCTGTTTTAGTATCTTT+AGG - chr8_3:28962249-28962268 Msa1285150:intron 30.0%
ATACTGAAACAATATTGGAC+CGG + chr8_3:28962294-28962313 None:intergenic 30.0%
CTAGGAAGTTGTATAATCAT+AGG + chr8_3:28962495-28962514 None:intergenic 30.0%
CTATGATTATACAACTTCCT+AGG - chr8_3:28962493-28962512 Msa1285150:intron 30.0%
CATTGAATAAACACTAACCT+AGG + chr8_3:28962513-28962532 None:intergenic 30.0%
!! ACTTTTATTGATGACTTTCC+AGG + chr8_3:28962678-28962697 None:intergenic 30.0%
CCTGGTAGTAACTTTATATT+TGG + chr8_3:28962746-28962765 None:intergenic 30.0%
CCAAATATAAAGTTACTACC+AGG - chr8_3:28962743-28962762 Msa1285150:intron 30.0%
CTATTCATGAAAGTCAAAAC+TGG - chr8_3:28962836-28962855 Msa1285150:CDS 30.0%
TTGTCTACTTCCATATAACT+TGG - chr8_3:28963047-28963066 Msa1285150:intron 30.0%
! AACTGAAGCGTAATGTTTTT+GGG + chr8_3:28963182-28963201 None:intergenic 30.0%
! TAACTGAAGCGTAATGTTTT+TGG + chr8_3:28963183-28963202 None:intergenic 30.0%
TAAAAGTCTATGCCTTAACT+TGG - chr8_3:28963207-28963226 Msa1285150:intron 30.0%
ATGAATAAGAGACCAAGTTA+AGG + chr8_3:28963222-28963241 None:intergenic 30.0%
CAGTACTCATCTAAAAGTTA+AGG + chr8_3:28963295-28963314 None:intergenic 30.0%
! AAGCCAAATTCTGAAAGAAT+TGG + chr8_3:28963345-28963364 None:intergenic 30.0%
AAGTAACGTTTATATAGGTG+GGG + chr8_3:28963385-28963404 None:intergenic 30.0%
! ACAAATTACAGTGTTACTGT+TGG - chr8_3:28963445-28963464 Msa1285150:intron 30.0%
! CAAATTACAGTGTTACTGTT+GGG - chr8_3:28963446-28963465 Msa1285150:intron 30.0%
ATTCAAACAGGAATCAAGTT+TGG + chr8_3:28963864-28963883 None:intergenic 30.0%
GATGATATCAATAACAAGCA+TGG + chr8_3:28963964-28963983 None:intergenic 30.0%
!! GTTGATAATGTTTCCTTTCT+AGG - chr8_3:28964030-28964049 Msa1285150:intron 30.0%
CTTAATATCATTTGCTTTCC+AGG - chr8_3:28964075-28964094 Msa1285150:intron 30.0%
AAAACAAACAAACAAAACCC+TGG + chr8_3:28964096-28964115 None:intergenic 30.0%
GAATATGTCTCGAAAGTTTA+TGG - chr8_3:28964193-28964212 Msa1285150:intron 30.0%
GTTATATTGCAACAGTTTGT+GGG - chr8_3:28964215-28964234 Msa1285150:intron 30.0%
AAATTGATATGCAGGTAGTT+CGG - chr8_3:28964302-28964321 Msa1285150:intron 30.0%
TTCTTCAACATAAATGGAAC+TGG - chr8_3:28964491-28964510 Msa1285150:CDS 30.0%
GATTGTGTTGTGAAAGAAAC+AGG + chr8_3:28953201-28953220 None:intergenic 35.0%
!! AAAATGAAAGTGTGGGGTTT+TGG + chr8_3:28953339-28953358 None:intergenic 35.0%
! GGTTTCAAAATGAAAGTGTG+GGG + chr8_3:28953345-28953364 None:intergenic 35.0%
GTGGTTTCAAAATGAAAGTG+TGG + chr8_3:28953347-28953366 None:intergenic 35.0%
AAAGAGTGGAACTTCTTGAT+AGG + chr8_3:28953396-28953415 None:intergenic 35.0%
AAGATTCAATGCGAACTCAA+CGG - chr8_3:28953462-28953481 Msa1285150:three_prime_UTR 35.0%
! ACTAGTTTAGATGTGGATTG+TGG - chr8_3:28953640-28953659 Msa1285150:intron 35.0%
!! CTTTTTCTCGAATTGATGGT+AGG - chr8_3:28953676-28953695 Msa1285150:intron 35.0%
TAGGGAACAAAGAAACTAAC+AGG - chr8_3:28953840-28953859 Msa1285150:intron 35.0%
AGGGAACAAAGAAACTAACA+GGG - chr8_3:28953841-28953860 Msa1285150:intron 35.0%
! TCATATTTTACCCAACAGGA+AGG - chr8_3:28953896-28953915 Msa1285150:intron 35.0%
!! CACACTACTTTTGTCTAAGT+AGG - chr8_3:28954116-28954135 Msa1285150:intron 35.0%
TCGACTTTACCAAGTAGAAA+AGG - chr8_3:28954473-28954492 Msa1285150:intron 35.0%
CGACTTTACCAAGTAGAAAA+GGG - chr8_3:28954474-28954493 Msa1285150:intron 35.0%
TGAGAACACTAATATGCAGA+GGG + chr8_3:28954796-28954815 None:intergenic 35.0%
! ATGACAGGTTTTCTATTGTC+TGG - chr8_3:28955261-28955280 Msa1285150:intron 35.0%
!! TTGGCTTTAGACTTTGCTTT+AGG - chr8_3:28955316-28955335 Msa1285150:intron 35.0%
!! TGGCTTTAGACTTTGCTTTA+GGG - chr8_3:28955317-28955336 Msa1285150:intron 35.0%
TCCAAAAGGAAGAATTGTAG+AGG - chr8_3:28955348-28955367 Msa1285150:intron 35.0%
! ACCTCTACAATTCTTCCTTT+TGG + chr8_3:28955352-28955371 None:intergenic 35.0%
CTGAACTTATTTGCATTCTC+TGG - chr8_3:28955410-28955429 Msa1285150:intron 35.0%
TGAGTTTGAAAAAATCACGG+TGG - chr8_3:28955499-28955518 Msa1285150:intron 35.0%
! AGAAGTACAGGTAATTCGTA+TGG - chr8_3:28955750-28955769 Msa1285150:intron 35.0%
GTTTATGTTGTGCAGAAGTT+AGG - chr8_3:28955857-28955876 Msa1285150:intron 35.0%
! TGATCCAGCATATTCTAAAG+CGG - chr8_3:28955916-28955935 Msa1285150:intron 35.0%
!! AGAGTAATACCTTTGACTTG+TGG - chr8_3:28955999-28956018 Msa1285150:intron 35.0%
!!! TGCCTTGAAGTTTTTTGCAT+CGG - chr8_3:28956613-28956632 Msa1285150:intron 35.0%
AACCGATGCAAAAAACTTCA+AGG + chr8_3:28956618-28956637 None:intergenic 35.0%
CGACTAGAAATTCGTTCTAT+AGG - chr8_3:28956638-28956657 Msa1285150:intron 35.0%
!!! CTGCATTTTGATTTCCGTTT+AGG - chr8_3:28956843-28956862 Msa1285150:intron 35.0%
!! AATGTAGTAACGGCTAGTTT+AGG + chr8_3:28957103-28957122 None:intergenic 35.0%
! CTGTGGACTAAATGTAGTAA+CGG + chr8_3:28957113-28957132 None:intergenic 35.0%
! CATTATTTCTTGCCAAGTTC+TGG + chr8_3:28957164-28957183 None:intergenic 35.0%
GCTTACTCTCTAAGTTACTT+AGG - chr8_3:28957351-28957370 Msa1285150:intron 35.0%
TACTATAATATACTCCCCTC+CGG - chr8_3:28957755-28957774 Msa1285150:intron 35.0%
AGAGGTAGTCATAACCAATA+AGG - chr8_3:28958113-28958132 Msa1285150:intron 35.0%
! GTTCTAGGCATAAACCTTAT+TGG + chr8_3:28958130-28958149 None:intergenic 35.0%
AACCAACTTAAAAGTGGTAG+AGG - chr8_3:28958253-28958272 Msa1285150:intron 35.0%
!!! TTTTTTTGTGTGGTTGCTGT+CGG - chr8_3:28958285-28958304 Msa1285150:intron 35.0%
!!! TGTCGAGATTTTGACTATCT+CGG - chr8_3:28958518-28958537 Msa1285150:intron 35.0%
TTGAGAATGTGATCAAATGC+AGG + chr8_3:28958559-28958578 None:intergenic 35.0%
!! CTGGCATAAGGTATTTTGTT+TGG + chr8_3:28958859-28958878 None:intergenic 35.0%
TGATACACTGTTAGATCTGA+TGG + chr8_3:28959864-28959883 None:intergenic 35.0%
! TTCTGGTGTTAATGAAAGAG+GGG + chr8_3:28959339-28959358 None:intergenic 35.0%
! CTTCTGGTGTTAATGAAAGA+GGG + chr8_3:28959340-28959359 None:intergenic 35.0%
! TCTTCTGGTGTTAATGAAAG+AGG + chr8_3:28959341-28959360 None:intergenic 35.0%
ATTTCTGATACGGAAACGAT+GGG + chr8_3:28959374-28959393 None:intergenic 35.0%
ATCGTTTCCGTATCAGAAAT+GGG - chr8_3:28959374-28959393 Msa1285150:intron 35.0%
AAAAAAATGCAGCATGGAGA+CGG + chr8_3:28959485-28959504 None:intergenic 35.0%
TTGTAGCAGAATCGAAACTT+TGG - chr8_3:28959613-28959632 Msa1285150:intron 35.0%
TGTAGCAGAATCGAAACTTT+GGG - chr8_3:28959614-28959633 Msa1285150:intron 35.0%
TTGGGAGCAATTTACCAATA+TGG - chr8_3:28959632-28959651 Msa1285150:intron 35.0%
TGATACACTGTTAGATCTGA+TGG - chr8_3:28959864-28959883 Msa1285150:intron 35.0%
AAAAGAAGACCGTTGGATAA+CGG + chr8_3:28959048-28959067 None:intergenic 35.0%
CAAGGTTGCGTAAAAATTGA+TGG + chr8_3:28960052-28960071 None:intergenic 35.0%
CAGAACAATCTAGACTAGAA+TGG + chr8_3:28960141-28960160 None:intergenic 35.0%
GCCGAATTCGATATTTCATT+TGG - chr8_3:28960300-28960319 Msa1285150:intron 35.0%
! TGTTTTACATCCTCCAACAT+TGG - chr8_3:28960561-28960580 Msa1285150:intron 35.0%
! GTTTTACATCCTCCAACATT+GGG - chr8_3:28960562-28960581 Msa1285150:intron 35.0%
! GAGCTACTTTAAGCTTGATT+TGG - chr8_3:28960607-28960626 Msa1285150:intron 35.0%
!! GCAGTTTTATAATCTGTCTG+TGG - chr8_3:28960646-28960665 Msa1285150:intron 35.0%
! TCGACTTGTAAAGAGAAAGA+CGG - chr8_3:28960746-28960765 Msa1285150:intron 35.0%
TTGTAGTTGCATGATATGGT+TGG - chr8_3:28960884-28960903 Msa1285150:intron 35.0%
TGTCTAGGTTCATTGCATAT+AGG + chr8_3:28960910-28960929 None:intergenic 35.0%
GAATAAAAAAGAAACGCGGA+AGG + chr8_3:28961018-28961037 None:intergenic 35.0%
! TTCATTTTGTGTCTCAATGG+TGG - chr8_3:28961081-28961100 Msa1285150:intron 35.0%
! TCATTTTGTGTCTCAATGGT+GGG - chr8_3:28961082-28961101 Msa1285150:intron 35.0%
GGATGATCAACATTAAGACA+TGG + chr8_3:28961132-28961151 None:intergenic 35.0%
CAAAACATTGCAGTACTTGA+AGG - chr8_3:28961188-28961207 Msa1285150:intron 35.0%
CTAGAAGAAGTTGAAAAGGT+TGG - chr8_3:28961225-28961244 Msa1285150:intron 35.0%
CCTAAATAAATAGAGGAAGC+AGG + chr8_3:28961554-28961573 None:intergenic 35.0%
CCTGCTTCCTCTATTTATTT+AGG - chr8_3:28961551-28961570 Msa1285150:CDS 35.0%
ACGAATCCACAACTTTAACA+TGG - chr8_3:28961706-28961725 Msa1285150:intron 35.0%
CGAATCCACAACTTTAACAT+GGG - chr8_3:28961707-28961726 Msa1285150:intron 35.0%
CAGCAACATAAACACTAAGA+AGG + chr8_3:28961841-28961860 None:intergenic 35.0%
!!! CTTTTTTACCTTTGTTACGG+TGG - chr8_3:28961886-28961905 Msa1285150:intron 35.0%
! AATTGATGAGTAGAAGCACA+TGG + chr8_3:28961953-28961972 None:intergenic 35.0%
ATGTGCTTCTACTCATCAAT+TGG - chr8_3:28961952-28961971 Msa1285150:CDS 35.0%
CCCAATAGTTGTATATGTGT+TGG - chr8_3:28962021-28962040 Msa1285150:CDS 35.0%
CCCAACACATATACAACTAT+TGG + chr8_3:28962025-28962044 None:intergenic 35.0%
ATAGTTGTATATGTGTTGGG+TGG - chr8_3:28962025-28962044 Msa1285150:CDS 35.0%
!! CTCCAACAATGGTTTTACTT+TGG - chr8_3:28962073-28962092 Msa1285150:intron 35.0%
AGCCAAAGTAAAACCATTGT+TGG + chr8_3:28962078-28962097 None:intergenic 35.0%
ATTTGTGTCACCATCAAATG+AGG - chr8_3:28962321-28962340 Msa1285150:intron 35.0%
TTTGTGTCACCATCAAATGA+GGG - chr8_3:28962322-28962341 Msa1285150:intron 35.0%
AAACTCAAACCCTCATTTGA+TGG + chr8_3:28962334-28962353 None:intergenic 35.0%
! TTTATTGATGACTTTCCAGG+TGG + chr8_3:28962675-28962694 None:intergenic 35.0%
TATAAAGTTACTACCAGGTC+AGG - chr8_3:28962748-28962767 Msa1285150:intron 35.0%
ATAAAGTTACTACCAGGTCA+GGG - chr8_3:28962749-28962768 Msa1285150:intron 35.0%
! TTTTGTCGGCAATTTCAGTT+TGG - chr8_3:28962805-28962824 Msa1285150:CDS 35.0%
! TCAAAACTGGTTTCTGTAGT+TGG - chr8_3:28962849-28962868 Msa1285150:CDS 35.0%
TTTCTGTAGTTGGAGTTTGA+TGG - chr8_3:28962859-28962878 Msa1285150:intron 35.0%
TTTAGTAAGCTTCAACTCGA+GGG - chr8_3:28962962-28962981 Msa1285150:intron 35.0%
TGTATGTTGTTGATGTACAC+AGG - chr8_3:28963249-28963268 Msa1285150:intron 35.0%
! CTGTTGGGAACTTTTCTATT+TGG - chr8_3:28963461-28963480 Msa1285150:intron 35.0%
!! AGTTTTAATCAAATCAGCCC+AGG + chr8_3:28963507-28963526 None:intergenic 35.0%
!! ACTTTGAGTTTGCTGATTCT+AGG - chr8_3:28963805-28963824 Msa1285150:intron 35.0%
CAGTCTTGAGTTATTCAAAC+AGG + chr8_3:28963876-28963895 None:intergenic 35.0%
! GAGAATACTGATGATTTGTC+AGG + chr8_3:28963905-28963924 None:intergenic 35.0%
TTTCGAGACATATTCGTGTA+TGG + chr8_3:28964188-28964207 None:intergenic 35.0%
GGTTATATTGCAACAGTTTG+TGG - chr8_3:28964214-28964233 Msa1285150:intron 35.0%
! TCGTATGTGAAAAGCTTGTT+TGG + chr8_3:28964351-28964370 None:intergenic 35.0%
TTCACATACGAAGAATAGTC+CGG - chr8_3:28964360-28964379 Msa1285150:intron 35.0%
TTTGAAGAAAGTCTGTGATG+AGG - chr8_3:28964406-28964425 Msa1285150:CDS 35.0%
AAGTTTGGATGATAGATTGC+AGG - chr8_3:28964446-28964465 Msa1285150:CDS 35.0%
!! TGGACGTAGCTTTAATGATT+AGG - chr8_3:28964511-28964530 Msa1285150:CDS 35.0%
ATTAAACTGATGCCTTTGGT+CGG - chr8_3:28964695-28964714 Msa1285150:five_prime_UTR 35.0%
AGAAGAGAAGAAGAAAAGGG+TGG + chr8_3:28953366-28953385 None:intergenic 40.0%
GAAGAAGAAGAAGCAAAGAG+AGG + chr8_3:28953423-28953442 None:intergenic 40.0%
! TTTCTCGAATTGATGGTAGG+AGG - chr8_3:28953679-28953698 Msa1285150:intron 40.0%
ATGTGACACTTCTGTCTGTT+AGG - chr8_3:28953821-28953840 Msa1285150:intron 40.0%
TGTGACACTTCTGTCTGTTA+GGG - chr8_3:28953822-28953841 Msa1285150:intron 40.0%
GAGCAAATTTCCTTCCTGTT+GGG + chr8_3:28953909-28953928 None:intergenic 40.0%
AGAGCAAATTTCCTTCCTGT+TGG + chr8_3:28953910-28953929 None:intergenic 40.0%
! TGGTAGAGTTTTTCCTTAGG+TGG - chr8_3:28954257-28954276 Msa1285150:intron 40.0%
ACACATGTTCAAACCACCTA+AGG + chr8_3:28954273-28954292 None:intergenic 40.0%
! GTGAAGGTTAGTCGAATACT+TGG - chr8_3:28954334-28954353 Msa1285150:intron 40.0%
TCATCCATGGCAGAAAATGT+TGG - chr8_3:28954431-28954450 Msa1285150:intron 40.0%
TACCAAGTAGAAAAGGGCTT+TGG - chr8_3:28954480-28954499 Msa1285150:intron 40.0%
CTGAGAACACTAATATGCAG+AGG + chr8_3:28954797-28954816 None:intergenic 40.0%
! TCTATTCTAGCAAAAGGCAC+TGG - chr8_3:28955037-28955056 Msa1285150:intron 40.0%
! ATTAGAGCGCTTAACATGAC+AGG - chr8_3:28955246-28955265 Msa1285150:intron 40.0%
! AACTTTTCCCAGTGGATGTT+TGG - chr8_3:28955297-28955316 Msa1285150:intron 40.0%
! TCTAAAGCCAAACATCCACT+GGG + chr8_3:28955307-28955326 None:intergenic 40.0%
!! GGCTTTAGACTTTGCTTTAG+GGG - chr8_3:28955318-28955337 Msa1285150:intron 40.0%
! GCTTTAGACTTTGCTTTAGG+GGG - chr8_3:28955319-28955338 Msa1285150:intron 40.0%
ATTTGCATTCTCTGGGTTCT+TGG - chr8_3:28955418-28955437 Msa1285150:intron 40.0%
! TGCTTTCTGGTCCAAATATC+TGG + chr8_3:28955696-28955715 None:intergenic 40.0%
ATATTTGGACCAGAAAGCAG+TGG - chr8_3:28955697-28955716 Msa1285150:intron 40.0%
TATTTGGACCAGAAAGCAGT+GGG - chr8_3:28955698-28955717 Msa1285150:intron 40.0%
! TGCAATAGCATGAAGTGCTA+GGG + chr8_3:28955731-28955750 None:intergenic 40.0%
! TCATGCTATTGCAGAAGTAC+AGG - chr8_3:28955738-28955757 Msa1285150:intron 40.0%
TATGTTGTGCAGAAGTTAGG+AGG - chr8_3:28955860-28955879 Msa1285150:intron 40.0%
!! ATATTCTAAAGCGGTAGGAG+TGG - chr8_3:28955925-28955944 Msa1285150:intron 40.0%
GTGCCCATATTGCATTATCA+GGG - chr8_3:28956053-28956072 Msa1285150:intron 40.0%
! GCACCCTGATAATGCAATAT+GGG + chr8_3:28956059-28956078 None:intergenic 40.0%
! AGCACCCTGATAATGCAATA+TGG + chr8_3:28956060-28956079 None:intergenic 40.0%
TGTTCACTTCAACTTCTGCT+CGG + chr8_3:28956193-28956212 None:intergenic 40.0%
AGAGATTGGAATGCAGCAAA+TGG - chr8_3:28956304-28956323 Msa1285150:intron 40.0%
GAGATTGGAATGCAGCAAAT+GGG - chr8_3:28956305-28956324 Msa1285150:intron 40.0%
! AAGAGTACAACCAGCTTTAG+AGG + chr8_3:28956381-28956400 None:intergenic 40.0%
TTGATTTCCGTTTAGGCCAA+AGG - chr8_3:28956850-28956869 Msa1285150:intron 40.0%
TTCATCTCCTTTGGCCTAAA+CGG + chr8_3:28956860-28956879 None:intergenic 40.0%
GCACTCTTACACGAACTTTA+AGG + chr8_3:28956891-28956910 None:intergenic 40.0%
! TGTAAGAGTGCAAAAGAGCA+AGG - chr8_3:28956900-28956919 Msa1285150:intron 40.0%
TTGTAGTAAGGCATGGACAT+GGG - chr8_3:28957026-28957045 Msa1285150:intron 40.0%
!! GTAACGGCTAGTTTAGGTTT+AGG + chr8_3:28957097-28957116 None:intergenic 40.0%
CCAAGGAATCAATTCTTCTG+TGG + chr8_3:28957130-28957149 None:intergenic 40.0%
! CCACAGAAGAATTGATTCCT+TGG - chr8_3:28957127-28957146 Msa1285150:intron 40.0%
!! TTGCCAAGTTCTGGAAAGTT+GGG + chr8_3:28957155-28957174 None:intergenic 40.0%
TTCAACATAGTATCAGAGGG+TGG + chr8_3:28957212-28957231 None:intergenic 40.0%
AGTAGCTTAGAGACTAAGCT+AGG + chr8_3:28957415-28957434 None:intergenic 40.0%
ACTGTGTCTGAATAGCATAC+CGG + chr8_3:28957460-28957479 None:intergenic 40.0%
TCTCTAATAATTGAGACCGG+AGG - chr8_3:28957989-28958008 Msa1285150:intron 40.0%
CTCTAATAATTGAGACCGGA+GGG - chr8_3:28957990-28958009 Msa1285150:intron 40.0%
GTCTTAGATATTACTCCCTC+CGG + chr8_3:28958008-28958027 None:intergenic 40.0%
!! GACCTCTACCACTTTTAAGT+TGG + chr8_3:28958258-28958277 None:intergenic 40.0%
!! GGATGACCTCTCTCTTATTT+TGG + chr8_3:28958356-28958375 None:intergenic 40.0%
!! ACCAATTCCAAGTTGGTCAT+CGG + chr8_3:28958449-28958468 None:intergenic 40.0%
TCTTGCTACCAATTCCAAGT+TGG + chr8_3:28958456-28958475 None:intergenic 40.0%
! ATCCAACGGTCTTCTTTTTG+AGG + chr8_3:28959896-28959915 None:intergenic 40.0%
AGAAGATGAAGATGGGAAGA+AGG + chr8_3:28959812-28959831 None:intergenic 40.0%
CATTTCTGATACGGAAACGA+TGG + chr8_3:28959375-28959394 None:intergenic 40.0%
CATCGTTTCCGTATCAGAAA+TGG - chr8_3:28959373-28959392 Msa1285150:intron 40.0%
!!! GTCTCCATGCTGCATTTTTT+TGG - chr8_3:28959484-28959503 Msa1285150:intron 40.0%
!!! TCCATGCTGCATTTTTTTGG+TGG - chr8_3:28959487-28959506 Msa1285150:intron 40.0%
!!! CCATGCTGCATTTTTTTGGT+GGG - chr8_3:28959488-28959507 Msa1285150:intron 40.0%
!!! CATGCTGCATTTTTTTGGTG+GGG - chr8_3:28959489-28959508 Msa1285150:intron 40.0%
! ATCCAACGGTCTTCTTTTTG+AGG - chr8_3:28959896-28959915 Msa1285150:intron 40.0%
! TCGAATTCGGCTACTTTGTA+AGG + chr8_3:28960291-28960310 None:intergenic 40.0%
GTCAATAAGCTGGTAAGTGT+TGG - chr8_3:28960330-28960349 Msa1285150:intron 40.0%
TTGTCTTAAAGAAGGGCTCT+TGG - chr8_3:28960450-28960469 Msa1285150:intron 40.0%
! GAGTTTTCAGACAATACCGA+TGG + chr8_3:28960490-28960509 None:intergenic 40.0%
CGGTATTGTCTGAAAACTCT+TGG - chr8_3:28960491-28960510 Msa1285150:intron 40.0%
TTCTTCGCAAATCCCAATGT+TGG + chr8_3:28960577-28960596 None:intergenic 40.0%
!! GCAATCATTCATTGGTTCGT+AGG - chr8_3:28960704-28960723 Msa1285150:intron 40.0%
TCTTGAAACAGGTTAGGACA+AGG - chr8_3:28961159-28961178 Msa1285150:intron 40.0%
AGGATCCCATGTTAAAGTTG+TGG + chr8_3:28961715-28961734 None:intergenic 40.0%
ACTTTAACATGGGATCCTAG+TGG - chr8_3:28961717-28961736 Msa1285150:CDS 40.0%
AAAGGGCAGCAAAATACTGA+CGG + chr8_3:28961763-28961782 None:intergenic 40.0%
! CTGCCCTTTTCTTGAATGTT+TGG - chr8_3:28961774-28961793 Msa1285150:CDS 40.0%
GCTTCTACTCATCAATTGGT+TGG - chr8_3:28961956-28961975 Msa1285150:CDS 40.0%
! CTCATCAATTGGTTGGTGTT+TGG - chr8_3:28961963-28961982 Msa1285150:CDS 40.0%
GCGGAAAACATAACTACTAG+AGG + chr8_3:28961989-28962008 None:intergenic 40.0%
ATGTGGTTATCTGTGTAGCA+TGG - chr8_3:28962132-28962151 Msa1285150:intron 40.0%
! TGAGGTTTGGAACAATTGTG+GGG + chr8_3:28962174-28962193 None:intergenic 40.0%
! CTGAGGTTTGGAACAATTGT+GGG + chr8_3:28962175-28962194 None:intergenic 40.0%
! ACTGAGGTTTGGAACAATTG+TGG + chr8_3:28962176-28962195 None:intergenic 40.0%
ACTAAAACAGAAGGTGGTGT+CGG + chr8_3:28962243-28962262 None:intergenic 40.0%
! AATGAGGGTTTGAGTTTGAG+CGG - chr8_3:28962337-28962356 Msa1285150:intron 40.0%
TACAAATATCCAAGTCCACC+TGG - chr8_3:28962657-28962676 Msa1285150:intron 40.0%
! AGTCGTGTTGTTGCATGTTT+GGG + chr8_3:28962717-28962736 None:intergenic 40.0%
! TAGTCGTGTTGTTGCATGTT+TGG + chr8_3:28962718-28962737 None:intergenic 40.0%
AAACATGCAACAACACGACT+AGG - chr8_3:28962717-28962736 Msa1285150:intron 40.0%
TAAAGTTACTACCAGGTCAG+GGG - chr8_3:28962750-28962769 Msa1285150:intron 40.0%
GTTTAGTAAGCTTCAACTCG+AGG - chr8_3:28962961-28962980 Msa1285150:intron 40.0%
GCGCCAATTCTTTCAGAATT+TGG - chr8_3:28963339-28963358 Msa1285150:intron 40.0%
ACGTTTATATAGGTGGGGTA+AGG + chr8_3:28963380-28963399 None:intergenic 40.0%
TTTGTCAAGACTCAAGAGTG+CGG + chr8_3:28963426-28963445 None:intergenic 40.0%
AATCAAATCAGCCCAGGTTT+GGG + chr8_3:28963501-28963520 None:intergenic 40.0%
TAATCAAATCAGCCCAGGTT+TGG + chr8_3:28963502-28963521 None:intergenic 40.0%
CATGATGTTGCATGCTTGAA+TGG - chr8_3:28963567-28963586 Msa1285150:intron 40.0%
TTGCATGCTTGAATGGTGAT+AGG - chr8_3:28963574-28963593 Msa1285150:intron 40.0%
GCTAAGCAGTTTCACCAAAA+TGG + chr8_3:28963667-28963686 None:intergenic 40.0%
ACCCTGATATTATGCTACTC+TGG - chr8_3:28963740-28963759 Msa1285150:intron 40.0%
GCCAGAGTAGCATAATATCA+GGG + chr8_3:28963744-28963763 None:intergenic 40.0%
AGCCAGAGTAGCATAATATC+AGG + chr8_3:28963745-28963764 None:intergenic 40.0%
ATACTCATAGTCGTGGAAGT+TGG + chr8_3:28963933-28963952 None:intergenic 40.0%
GCATACTCTTCATCCTAGAA+AGG + chr8_3:28964046-28964065 None:intergenic 40.0%
GTTCGGTCTTCAATGAATGA+TGG - chr8_3:28964319-28964338 Msa1285150:intron 40.0%
! CTTTGACTCGACCAGTTTAA+TGG - chr8_3:28964640-28964659 Msa1285150:five_prime_UTR 40.0%
GGTGATTAAACTGATGCCTT+TGG - chr8_3:28964691-28964710 Msa1285150:five_prime_UTR 40.0%
TTAAACTGATGCCTTTGGTC+GGG - chr8_3:28964696-28964715 Msa1285150:five_prime_UTR 40.0%
GAAACGAGCGTCAAAATCAG+CGG + chr8_3:28953496-28953515 None:intergenic 45.0%
TTGACGCTCGTTTCGTTGAT+AGG - chr8_3:28953502-28953521 Msa1285150:CDS 45.0%
TGACGCTCGTTTCGTTGATA+GGG - chr8_3:28953503-28953522 Msa1285150:CDS 45.0%
ACCTTGTCAATCCTCCATTG+CGG + chr8_3:28954316-28954335 None:intergenic 45.0%
ATGGAGGATTGACAAGGTGA+AGG - chr8_3:28954318-28954337 Msa1285150:intron 45.0%
AGTCGAATACTTGGAGCAAG+AGG - chr8_3:28954343-28954362 Msa1285150:intron 45.0%
TGACCTATGGACATCATCCA+TGG - chr8_3:28954418-28954437 Msa1285150:intron 45.0%
! GACACCAACATTTTCTGCCA+TGG + chr8_3:28954438-28954457 None:intergenic 45.0%
! CACCAAAGCCCTTTTCTACT+TGG + chr8_3:28954485-28954504 None:intergenic 45.0%
! CAAGTAGAAAAGGGCTTTGG+TGG - chr8_3:28954483-28954502 Msa1285150:intron 45.0%
! TGCAGTGAAACTTTTCCCAG+TGG - chr8_3:28955289-28955308 Msa1285150:intron 45.0%
! GTCTAAAGCCAAACATCCAC+TGG + chr8_3:28955308-28955327 None:intergenic 45.0%
!! TTAGACTTTGCTTTAGGGGG+TGG - chr8_3:28955322-28955341 Msa1285150:intron 45.0%
! AATAGCATGAAGTGCTAGGG+TGG + chr8_3:28955728-28955747 None:intergenic 45.0%
! CTGCAATAGCATGAAGTGCT+AGG + chr8_3:28955732-28955751 None:intergenic 45.0%
CAGGTAATTCGTATGGACTC+TGG - chr8_3:28955757-28955776 Msa1285150:intron 45.0%
!! CCTACCGCTTTAGAATATGC+TGG + chr8_3:28955923-28955942 None:intergenic 45.0%
!! CCAGCATATTCTAAAGCGGT+AGG - chr8_3:28955920-28955939 Msa1285150:intron 45.0%
AAGAGCCATCTCTCCATGAT+CGG + chr8_3:28955978-28955997 None:intergenic 45.0%
CCAACACAACCACAAGTCAA+AGG + chr8_3:28956011-28956030 None:intergenic 45.0%
!! CCTTTGACTTGTGGTTGTGT+TGG - chr8_3:28956008-28956027 Msa1285150:intron 45.0%
GACTTGTGGTTGTGTTGGAA+TGG - chr8_3:28956013-28956032 Msa1285150:intron 45.0%
GGTGCCCATATTGCATTATC+AGG - chr8_3:28956052-28956071 Msa1285150:intron 45.0%
!! TGCATTATCAGGGTGCTGTA+TGG - chr8_3:28956063-28956082 Msa1285150:intron 45.0%
GCAGATCGTATGTGTAGATC+TGG - chr8_3:28956122-28956141 Msa1285150:intron 45.0%
GTCCACGCAAATGAGATCTA+TGG + chr8_3:28956150-28956169 None:intergenic 45.0%
TTCACTTCAACTTCTGCTCG+GGG + chr8_3:28956191-28956210 None:intergenic 45.0%
GTTCACTTCAACTTCTGCTC+GGG + chr8_3:28956192-28956211 None:intergenic 45.0%
AATGCAGCAAATGGGATTGC+AGG - chr8_3:28956313-28956332 Msa1285150:intron 45.0%
CAGACATCTTACGCAAAGCT+TGG + chr8_3:28956352-28956371 None:intergenic 45.0%
CAAGCTTTGCGTAAGATGTC+TGG - chr8_3:28956350-28956369 Msa1285150:intron 45.0%
!! TCTGGAAATGCCTCTAAAGC+TGG - chr8_3:28956368-28956387 Msa1285150:intron 45.0%
GGAAATCCAGAAGTGACAAG+TGG - chr8_3:28956584-28956603 Msa1285150:intron 45.0%
AATCCAGAAGTGACAAGTGG+TGG - chr8_3:28956587-28956606 Msa1285150:intron 45.0%
! ATTCCACCACTTGTCACTTC+TGG + chr8_3:28956593-28956612 None:intergenic 45.0%
GCCAAAGGAGATGAAGAAGT+TGG - chr8_3:28956865-28956884 Msa1285150:intron 45.0%
GCCAACTTCTTCATCTCCTT+TGG + chr8_3:28956869-28956888 None:intergenic 45.0%
CTTGTAGTAAGGCATGGACA+TGG - chr8_3:28957025-28957044 Msa1285150:intron 45.0%
AGGCATGGACATGGGTTTAT+TGG - chr8_3:28957034-28957053 Msa1285150:intron 45.0%
GACATGGGTTTATTGGTGAG+TGG - chr8_3:28957041-28957060 Msa1285150:intron 45.0%
!! TGCCAAGTTCTGGAAAGTTG+GGG + chr8_3:28957154-28957173 None:intergenic 45.0%
!! CTTGCCAAGTTCTGGAAAGT+TGG + chr8_3:28957156-28957175 None:intergenic 45.0%
AATGATACCACATGTCACGG+AGG - chr8_3:28957180-28957199 Msa1285150:intron 45.0%
TGTCTGAATAGCATACCGGA+AGG + chr8_3:28957456-28957475 None:intergenic 45.0%
AATAAGAGAGAGGTCATCCG+TGG - chr8_3:28958357-28958376 Msa1285150:intron 45.0%
! GACTCGGTCTTGATGTTTGT+TGG - chr8_3:28958391-28958410 Msa1285150:intron 45.0%
GAACTACCAGAGACTTTGAG+AGG - chr8_3:28958420-28958439 Msa1285150:intron 45.0%
ACCGATGACCAACTTGGAAT+TGG - chr8_3:28958445-28958464 Msa1285150:intron 45.0%
AGTCAAAATCTCGACAGCTG+TGG + chr8_3:28958514-28958533 None:intergenic 45.0%
AATGAGGACACACCCTTTAG+AGG + chr8_3:28958621-28958640 None:intergenic 45.0%
! AGGGTGTGTCCTCATTTTAG+AGG - chr8_3:28958625-28958644 Msa1285150:intron 45.0%
GTCCTCAAAAAGAAGACCGT+TGG - chr8_3:28959041-28959060 Msa1285150:intron 45.0%
AGAAGACCGTTGGATAACAG+AGG - chr8_3:28959051-28959070 Msa1285150:intron 45.0%
GATGGACCTCTGTTATCCAA+CGG + chr8_3:28959060-28959079 None:intergenic 45.0%
CGGAGATCCCATTTCTGATA+CGG + chr8_3:28959384-28959403 None:intergenic 45.0%
GTTGTTTGAGTCGTTGAGTG+TGG + chr8_3:28959420-28959439 None:intergenic 45.0%
CCCACCAAAAAAATGCAGCA+TGG + chr8_3:28959491-28959510 None:intergenic 45.0%
ACCAATATGGATCTGCGTTG+CGG - chr8_3:28959645-28959664 Msa1285150:intron 45.0%
GTCCTCAAAAAGAAGACCGT+TGG + chr8_3:28959041-28959060 None:intergenic 45.0%
AAGGGCTCTTGGTACAGTTA+TGG - chr8_3:28960461-28960480 Msa1285150:intron 45.0%
AGGGCTCTTGGTACAGTTAT+GGG - chr8_3:28960462-28960481 Msa1285150:intron 45.0%
TTCGCAAATCCCAATGTTGG+AGG + chr8_3:28960574-28960593 None:intergenic 45.0%
TCATTGAGGATCGAACCACT+AGG + chr8_3:28961735-28961754 None:intergenic 45.0%
AAGGGCAGCAAAATACTGAC+GGG + chr8_3:28961762-28961781 None:intergenic 45.0%
ACATGTGACCACCGTAACAA+AGG + chr8_3:28961897-28961916 None:intergenic 45.0%
!! GTGTTGGGTGGTTTTGCTTT+TGG - chr8_3:28962037-28962056 Msa1285150:intron 45.0%
TGTTTGCGACTCTCCAACAA+TGG - chr8_3:28962062-28962081 Msa1285150:intron 45.0%
GTTATCTGTGTAGCATGGTG+TGG - chr8_3:28962137-28962156 Msa1285150:intron 45.0%
GTTGAAGCTGTGATGTCTTC+TGG - chr8_3:28962399-28962418 Msa1285150:intron 45.0%
! AGCTGTGATGTCTTCTGGTT+TGG - chr8_3:28962404-28962423 Msa1285150:intron 45.0%
!! GCTGTGATGTCTTCTGGTTT+GGG - chr8_3:28962405-28962424 Msa1285150:intron 45.0%
AAAGTTACTACCAGGTCAGG+GGG - chr8_3:28962751-28962770 Msa1285150:intron 45.0%
CAAAACGTCGATAACTGCCA+GGG + chr8_3:28962790-28962809 None:intergenic 45.0%
ACAAAACGTCGATAACTGCC+AGG + chr8_3:28962791-28962810 None:intergenic 45.0%
! GGCAGTTATCGACGTTTTGT+CGG - chr8_3:28962791-28962810 Msa1285150:CDS 45.0%
! TTGTCAAGACTCAAGAGTGC+GGG + chr8_3:28963425-28963444 None:intergenic 45.0%
TAAGAGAGGATTCCCAAACC+TGG - chr8_3:28963486-28963505 Msa1285150:intron 45.0%
AAGAGAGGATTCCCAAACCT+GGG - chr8_3:28963487-28963506 Msa1285150:intron 45.0%
TGGTGAAACTGCTTAGCGTA+AGG - chr8_3:28963670-28963689 Msa1285150:intron 45.0%
GTTGAGCATACTCATAGTCG+TGG + chr8_3:28963940-28963959 None:intergenic 45.0%
TCTTCGTCTTGATGAAGCAC+CGG + chr8_3:28964382-28964401 None:intergenic 45.0%
GACCAGTTTAATGGTCGAAC+CGG - chr8_3:28964649-28964668 Msa1285150:five_prime_UTR 45.0%
AGTTCAACCGATTGCATCAC+CGG + chr8_3:28964671-28964690 None:intergenic 45.0%
!!! TTCTATATATTTAATTTTAA+TGG - chr8_3:28954746-28954765 Msa1285150:intron 5.0%
!! ATACATTTATATAAAAAATA+TGG + chr8_3:28956280-28956299 None:intergenic 5.0%
!!! TATTTTTTATATAAATGTAT+AGG - chr8_3:28956280-28956299 Msa1285150:intron 5.0%
!!! ATTTTTTATATAAATGTATA+GGG - chr8_3:28956281-28956300 Msa1285150:intron 5.0%
CAAAGAGAGGACGCAAAGAG+TGG + chr8_3:28953410-28953429 None:intergenic 50.0%
ACATGTGTGCCCGATCATCT+TGG - chr8_3:28954285-28954304 Msa1285150:intron 50.0%
TGTGCCCGATCATCTTGGAA+GGG - chr8_3:28954290-28954309 Msa1285150:intron 50.0%
CTGCCATGGATGATGTCCAT+AGG + chr8_3:28954424-28954443 None:intergenic 50.0%
GTTACAAGATTGGGCAGTGC+TGG - chr8_3:28955104-28955123 Msa1285150:intron 50.0%
TTAGGGGGTGGTCTTCCAAA+AGG - chr8_3:28955334-28955353 Msa1285150:intron 50.0%
AGAGCCATCTCTCCATGATC+GGG + chr8_3:28955977-28955996 None:intergenic 50.0%
CGCCATAGATCTCATTTGCG+TGG - chr8_3:28956145-28956164 Msa1285150:intron 50.0%
! TTCTGGAAAGTTGGGGACCA+AGG + chr8_3:28957147-28957166 None:intergenic 50.0%
GTCCCCAACTTTCCAGAACT+TGG - chr8_3:28957149-28957168 Msa1285150:intron 50.0%
ATACCACATGTCACGGAGGA+TGG - chr8_3:28957184-28957203 Msa1285150:intron 50.0%
CCTATCCAAGATCCACCGTT+GGG - chr8_3:28957529-28957548 Msa1285150:intron 50.0%
! TTTTGTGTGGTTGCTGTCGG+AGG - chr8_3:28958288-28958307 Msa1285150:intron 50.0%
GGCTTAACCATGACGTTGGT+CGG - chr8_3:28958309-28958328 Msa1285150:intron 50.0%
CATGACGTTGGTCGGATGAT+GGG - chr8_3:28958317-28958336 Msa1285150:intron 50.0%
ATGGGTGGAGACTCTTCTTC+TGG + chr8_3:28959356-28959375 None:intergenic 50.0%
TCTGATACGGAAACGATGGG+TGG + chr8_3:28959371-28959390 None:intergenic 50.0%
ACCGCAACGCAGATCCATAT+TGG + chr8_3:28959649-28959668 None:intergenic 50.0%
CGGTTGTGGTTGCTTGTTTG+AGG - chr8_3:28959665-28959684 Msa1285150:intron 50.0%
GATGGACCTCCGTTATCCAA+CGG - chr8_3:28959882-28959901 Msa1285150:intron 50.0%
! AGAAGACCGTTGGATAACGG+AGG + chr8_3:28959891-28959910 None:intergenic 50.0%
TGGAGAGGGAGTCAATAAGC+TGG - chr8_3:28960320-28960339 Msa1285150:intron 50.0%
GGGCTCTTGGTACAGTTATG+GGG - chr8_3:28960463-28960482 Msa1285150:intron 50.0%
GGTACAGTTATGGGGACCAT+CGG - chr8_3:28960471-28960490 Msa1285150:intron 50.0%
AAAGAAACGCGGAAGGGAAG+AGG + chr8_3:28961011-28961030 None:intergenic 50.0%
TCGCTTCAACTACCAGTTCC+TGG - chr8_3:28961917-28961936 Msa1285150:CDS 50.0%
TATTGGGAGCTGACGAGAAG+CGG + chr8_3:28962008-28962027 None:intergenic 50.0%
TGTAGCATGGTGTGGCACTT+TGG - chr8_3:28962145-28962164 Msa1285150:intron 50.0%
!! ATCTTTAGGACTTCCGCTGC+AGG - chr8_3:28962263-28962282 Msa1285150:intron 50.0%
! GATGACTTTCCAGGTGGACT+TGG + chr8_3:28962669-28962688 None:intergenic 50.0%
TAACTGCCAGGGTCTTTCAG+TGG + chr8_3:28962779-28962798 None:intergenic 50.0%
!! CACCGGTTCGACCATTAAAC+TGG + chr8_3:28964654-28964673 None:intergenic 50.0%
GGTGATGCAATCGGTTGAAC+TGG - chr8_3:28964670-28964689 Msa1285150:five_prime_UTR 50.0%
GTGTGCCCGATCATCTTGGA+AGG - chr8_3:28954289-28954308 Msa1285150:intron 55.0%
TGCGGCCCTTCCAAGATGAT+CGG + chr8_3:28954298-28954317 None:intergenic 55.0%
TCATCTTGGAAGGGCCGCAA+TGG - chr8_3:28954299-28954318 Msa1285150:intron 55.0%
GCCGCAATGGAGGATTGACA+AGG - chr8_3:28954312-28954331 Msa1285150:intron 55.0%
! ACAAGATTGGGCAGTGCTGG+TGG - chr8_3:28955107-28955126 Msa1285150:intron 55.0%
GTGGTCTTCCCACTGCTTTC+TGG + chr8_3:28955709-28955728 None:intergenic 55.0%
ATCGTGTGCCAACCCGATCA+TGG - chr8_3:28955962-28955981 Msa1285150:intron 55.0%
CCATCTCTCCATGATCGGGT+TGG + chr8_3:28955973-28955992 None:intergenic 55.0%
CCAACCCGATCATGGAGAGA+TGG - chr8_3:28955970-28955989 Msa1285150:intron 55.0%
GTACCATCCTCCGTGACATG+TGG + chr8_3:28957190-28957209 None:intergenic 55.0%
GCCTATCCAAGATCCACCGT+TGG - chr8_3:28957528-28957547 Msa1285150:intron 55.0%
CCCAACGGTGGATCTTGGAT+AGG + chr8_3:28957532-28957551 None:intergenic 55.0%
GGAATCCCAACGGTGGATCT+TGG + chr8_3:28957537-28957556 None:intergenic 55.0%
GTGGCAATGCGGAATCCCAA+CGG + chr8_3:28957547-28957566 None:intergenic 55.0%
TTGCCACGCTTCATGCCCAT+TGG - chr8_3:28957560-28957579 Msa1285150:intron 55.0%
AAGCCAATGGGCATGAAGCG+TGG + chr8_3:28957566-28957585 None:intergenic 55.0%
CCCTCACGCTCAAAGCCAAT+GGG + chr8_3:28957578-28957597 None:intergenic 55.0%
!! CCCATTGGCTTTGAGCGTGA+GGG - chr8_3:28957575-28957594 Msa1285150:intron 55.0%
!! CCATTGGCTTTGAGCGTGAG+GGG - chr8_3:28957576-28957595 Msa1285150:CDS 55.0%
!! CATTGGCTTTGAGCGTGAGG+GGG - chr8_3:28957577-28957596 Msa1285150:CDS 55.0%
!!! TTGAGCGTGAGGGGGTGTTT+TGG - chr8_3:28957585-28957604 Msa1285150:CDS 55.0%
CAACACACCCTCTCATGCTC+GGG + chr8_3:28957620-28957639 None:intergenic 55.0%
CCAACACACCCTCTCATGCT+CGG + chr8_3:28957621-28957640 None:intergenic 55.0%
CGGAGGCTTAACCATGACGT+TGG - chr8_3:28958305-28958324 Msa1285150:intron 55.0%
CCATCATCCGACCAACGTCA+TGG + chr8_3:28958319-28958338 None:intergenic 55.0%
CCATGACGTTGGTCGGATGA+TGG - chr8_3:28958316-28958335 Msa1285150:intron 55.0%
CGGTCACCTCTCAAAGTCTC+TGG + chr8_3:28958429-28958448 None:intergenic 55.0%
GAGGTGACCGATGACCAACT+TGG - chr8_3:28958439-28958458 Msa1285150:intron 55.0%
ATGGATCTGCGTTGCGGTTG+TGG - chr8_3:28959651-28959670 Msa1285150:intron 55.0%
! TACTGACGGGCAGGTCATTG+AGG + chr8_3:28961749-28961768 None:intergenic 55.0%
! GCAGCAAAATACTGACGGGC+AGG + chr8_3:28961758-28961777 None:intergenic 55.0%
GGACTTCAAGCACCAGGAAC+TGG + chr8_3:28961932-28961951 None:intergenic 55.0%
GCACATGGACTTCAAGCACC+AGG + chr8_3:28961938-28961957 None:intergenic 55.0%
!! GAAGGTGGTGTCGGTAGTGT+TGG + chr8_3:28962234-28962253 None:intergenic 55.0%
! GACTCAAGAGTGCGGGATTG+AGG + chr8_3:28963418-28963437 None:intergenic 55.0%
GGTCGAACCGGTGATGCAAT+CGG - chr8_3:28964661-28964680 Msa1285150:five_prime_UTR 55.0%
GATGCCTTTGGTCGGGTAGT+CGG - chr8_3:28964703-28964722 Msa1285150:five_prime_UTR 55.0%
GCGGCCCTTCCAAGATGATC+GGG + chr8_3:28954297-28954316 None:intergenic 60.0%
TCTTGGAAGGGCCGCAATGG+AGG - chr8_3:28954302-28954321 Msa1285150:intron 60.0%
TCGGGGAGTGAGAGCTGAGA+CGG + chr8_3:28956174-28956193 None:intergenic 60.0%
GCAATGCGGAATCCCAACGG+TGG + chr8_3:28957544-28957563 None:intergenic 60.0%
GGGCATGAAGCGTGGCAATG+CGG + chr8_3:28957558-28957577 None:intergenic 60.0%
!! GCCCATTGGCTTTGAGCGTG+AGG - chr8_3:28957574-28957593 Msa1285150:intron 60.0%
CCCCTCACGCTCAAAGCCAA+TGG + chr8_3:28957579-28957598 None:intergenic 60.0%
AATCCCCTCCCGAGCATGAG+AGG - chr8_3:28957609-28957628 Msa1285150:CDS 60.0%
ATCCCCTCCCGAGCATGAGA+GGG - chr8_3:28957610-28957629 Msa1285150:CDS 60.0%
ACACCCTCTCATGCTCGGGA+GGG + chr8_3:28957616-28957635 None:intergenic 60.0%
! CCGAGCATGAGAGGGTGTGT+TGG - chr8_3:28957618-28957637 Msa1285150:CDS 60.0%
AGAGAGAGGTCATCCGTGGC+TGG - chr8_3:28958361-28958380 Msa1285150:intron 60.0%
CGAGTCGTCTACACCAGCCA+CGG + chr8_3:28958377-28958396 None:intergenic 60.0%
CGTGGCTGGTGTAGACGACT+CGG - chr8_3:28958375-28958394 Msa1285150:intron 60.0%
!! GGTGGTGTCGGTAGTGTTGG+TGG + chr8_3:28962231-28962250 None:intergenic 60.0%
ACTTCCGCTGCAGGTAGCAC+CGG - chr8_3:28962272-28962291 Msa1285150:intron 60.0%
TTCAGTGGTTCCCCCTGACC+TGG + chr8_3:28962764-28962783 None:intergenic 60.0%
GGGGAACCACTGAAAGACCC+TGG - chr8_3:28962770-28962789 Msa1285150:intron 60.0%
CAGTCCGACTACCCGACCAA+AGG + chr8_3:28964710-28964729 None:intergenic 60.0%
CTTTGGTCGGGTAGTCGGAC+TGG - chr8_3:28964708-28964727 Msa1285150:five_prime_UTR 60.0%
CACCCTCTCATGCTCGGGAG+GGG + chr8_3:28957615-28957634 None:intergenic 65.0%
CACACCCTCTCATGCTCGGG+AGG + chr8_3:28957617-28957636 None:intergenic 65.0%
!! TGGACCGGTGCTACCTGCAG+CGG + chr8_3:28962279-28962298 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 28953169 28964748 28953169 ID=Msa1285150;Name=Msa1285150
chr8_3 mRNA 28953169 28964748 28953169 ID=Msa1285150-mRNA-1;Parent=Msa1285150;Name=Msa1285150-mRNA-1;_AED=0.24;_eAED=0.24;_QI=146|0.9|1|1|0.8|1|11|325|371
chr8_3 exon 28953169 28953601 28953169 ID=Msa1285150-mRNA-1:exon:9657;Parent=Msa1285150-mRNA-1
chr8_3 exon 28957576 28957638 28957576 ID=Msa1285150-mRNA-1:exon:9656;Parent=Msa1285150-mRNA-1
chr8_3 exon 28960996 28961052 28960996 ID=Msa1285150-mRNA-1:exon:9655;Parent=Msa1285150-mRNA-1
chr8_3 exon 28961244 28961348 28961244 ID=Msa1285150-mRNA-1:exon:9654;Parent=Msa1285150-mRNA-1
chr8_3 exon 28961490 28961615 28961490 ID=Msa1285150-mRNA-1:exon:9653;Parent=Msa1285150-mRNA-1
chr8_3 exon 28961712 28961797 28961712 ID=Msa1285150-mRNA-1:exon:9652;Parent=Msa1285150-mRNA-1
chr8_3 exon 28961916 28962045 28961916 ID=Msa1285150-mRNA-1:exon:9651;Parent=Msa1285150-mRNA-1
chr8_3 exon 28962158 28962220 28962158 ID=Msa1285150-mRNA-1:exon:9650;Parent=Msa1285150-mRNA-1
chr8_3 exon 28962548 28962623 28962548 ID=Msa1285150-mRNA-1:exon:9649;Parent=Msa1285150-mRNA-1
chr8_3 exon 28962779 28962870 28962779 ID=Msa1285150-mRNA-1:exon:9648;Parent=Msa1285150-mRNA-1
chr8_3 exon 28964393 28964748 28964393 ID=Msa1285150-mRNA-1:exon:9647;Parent=Msa1285150-mRNA-1
chr8_3 five_prime_UTR 28964603 28964748 28964603 ID=Msa1285150-mRNA-1:five_prime_utr;Parent=Msa1285150-mRNA-1
chr8_3 CDS 28964393 28964602 28964393 ID=Msa1285150-mRNA-1:cds;Parent=Msa1285150-mRNA-1
chr8_3 CDS 28962779 28962870 28962779 ID=Msa1285150-mRNA-1:cds;Parent=Msa1285150-mRNA-1
chr8_3 CDS 28962548 28962623 28962548 ID=Msa1285150-mRNA-1:cds;Parent=Msa1285150-mRNA-1
chr8_3 CDS 28962158 28962220 28962158 ID=Msa1285150-mRNA-1:cds;Parent=Msa1285150-mRNA-1
chr8_3 CDS 28961916 28962045 28961916 ID=Msa1285150-mRNA-1:cds;Parent=Msa1285150-mRNA-1
chr8_3 CDS 28961712 28961797 28961712 ID=Msa1285150-mRNA-1:cds;Parent=Msa1285150-mRNA-1
chr8_3 CDS 28961490 28961615 28961490 ID=Msa1285150-mRNA-1:cds;Parent=Msa1285150-mRNA-1
chr8_3 CDS 28961244 28961348 28961244 ID=Msa1285150-mRNA-1:cds;Parent=Msa1285150-mRNA-1
chr8_3 CDS 28960996 28961052 28960996 ID=Msa1285150-mRNA-1:cds;Parent=Msa1285150-mRNA-1
chr8_3 CDS 28957576 28957638 28957576 ID=Msa1285150-mRNA-1:cds;Parent=Msa1285150-mRNA-1
chr8_3 CDS 28953494 28953601 28953494 ID=Msa1285150-mRNA-1:cds;Parent=Msa1285150-mRNA-1
chr8_3 three_prime_UTR 28953169 28953493 28953169 ID=Msa1285150-mRNA-1:three_prime_utr;Parent=Msa1285150-mRNA-1
Gene Sequence

>Msa1285150

ATGGATTTGGTGTTTTTTTCTCCAAAACCCCACACTTTCATTTTGAAACCACCCTTTTCTTCTTCTCTTCTATTTCATCCTATCAAGAAGTTCCACTCTTTGCGTCCTCTCTTTGCTTCTTCTTCTTCTTCTTCTTCTAAACATGTCAAGATTCAATGCGAACTCAACGGTTCTCTTTCCGCTGATTTTGACGCTCGTTTCGTTGATAGGCAAAAGGCACTGGAAGCAGCAATGAATGATATAAACAACTCTTTTGGAAAAGGTAGTGTTACAAGATTGGGCAGTGCTGGTGGAGCATTAGTTGAAACTTTTCCCAGTGGATGTTTGGCTTTAGACTTTGCTTTAGGGGGTGGTCTTCCAAAAGGAAGAATTGTAGAGATATTTGGACCAGAAAGCAGTGGGAAGACCACCCTAGCACTTCATGCTATTGCAGAAGTACAGAAGTTAGGAGGCAATGCAATGCTTGTTGATGCAGAGCATGCTTTTGATCCAGCATATTCTAAAGCGGTAGGAGTGGATGTAGAAAATTTAATCGTGTGCCAACCCGATCATGGAGAGATGGCTCTTGAGATCGCAGATCGTATGTGTAGATCTGGCGCCATAGATCTCATTTGCGTGGACTCCGTCTCAGCTCTCACTCCCCGAGCAGAAGTTGAAGGAGAGATTGGAATGCAGCAAATGGGATTGCAGGCTCGTCTTATGAGCCAAGCTTTGCGTAAGATGTCTGGAAATGCCTCTAAAGCTGGTTGTACTCTTATATTTCTGAACCAAATAAGATATAAGATTGGTGTCTATTATGGAAATCCAGAAGTGACAAGTGGTGGAATTGCCTTGAAGTTTTTTGCATCGGTTCGACTAGAAATTCGTTCTATAGGGAAGATAAAGTCTGCCAAAGGAGATGAAGAAGTTGGCCTTAAAGTTCGTGTAAGAGTGCAAAAGAGCAAGGTGTCAAGACCTTACAAAGTAGCCGAATTCGATATTTCATTTGGAGAGGGAGTCAATAAGCTGGTAGTTCGGTCTTCAATGAATGATGGAACTAACCAAACAAGCTTTTCACATACGAAGAATAGTCCGGTGCTTCATCAAGACGAAGATATATTTGAAGAAAGTCTGTGA

Protein sequence

>Msa1285150

MDLVFFSPKPHTFILKPPFSSSLLFHPIKKFHSLRPLFASSSSSSSKHVKIQCELNGSLSADFDARFVDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLALDFALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQPDHGEMALEIADRMCRSGAIDLICVDSVSALTPRAEVEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSIGKIKSAKGDEEVGLKVRVRVQKSKVSRPYKVAEFDISFGEGVNKLVVRSSMNDGTNQTSFSHTKNSPVLHQDEDIFEESL*