Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0481380 | XP_013445459.1 | 86.635 | 419 | 5 | 2 | 1 | 369 | 1 | 418 | 0.0 | 714 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0481380 | sp|Q39199|RECAC_ARATH | 79.701 | 335 | 62 | 3 | 6 | 334 | 15 | 349 | 0.0 | 529 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0481380 | A0A072U131 | 86.635 | 419 | 5 | 2 | 1 | 369 | 1 | 418 | 0.0 | 714 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0006700 | Msa0481380 | 0.806815 | 6.849518e-50 | -8.615850e-47 |
Msa0008850 | Msa0481380 | 0.829925 | 3.918179e-55 | -8.615850e-47 |
Msa0020630 | Msa0481380 | 0.818081 | 2.360717e-52 | -8.615850e-47 |
Msa0027540 | Msa0481380 | 0.814692 | 1.353261e-51 | -8.615850e-47 |
Msa0030000 | Msa0481380 | 0.816475 | 5.426461e-52 | -8.615850e-47 |
Msa0038350 | Msa0481380 | -0.811080 | 8.373560e-51 | -8.615850e-47 |
Msa0047470 | Msa0481380 | 0.804289 | 2.320151e-49 | -8.615850e-47 |
Msa0050720 | Msa0481380 | 0.810845 | 9.411061e-51 | -8.615850e-47 |
Msa0050770 | Msa0481380 | 0.809373 | 1.953864e-50 | -8.615850e-47 |
Msa0055280 | Msa0481380 | 0.810762 | 9.809329e-51 | -8.615850e-47 |
Msa0075310 | Msa0481380 | 0.817522 | 3.157148e-52 | -8.615850e-47 |
Msa0087110 | Msa0481380 | 0.804358 | 2.244330e-49 | -8.615850e-47 |
Msa0091770 | Msa0481380 | 0.829182 | 5.940936e-55 | -8.615850e-47 |
Msa0100250 | Msa0481380 | 0.800804 | 1.213900e-48 | -8.615850e-47 |
Msa0105340 | Msa0481380 | 0.807642 | 4.575644e-50 | -8.615850e-47 |
Msa0114250 | Msa0481380 | 0.806337 | 8.638117e-50 | -8.615850e-47 |
Msa0149500 | Msa0481380 | 0.809952 | 1.467068e-50 | -8.615850e-47 |
Msa0159750 | Msa0481380 | 0.818691 | 1.717995e-52 | -8.615850e-47 |
Msa0164360 | Msa0481380 | 0.800210 | 1.603614e-48 | -8.615850e-47 |
Msa0168100 | Msa0481380 | 0.822461 | 2.339841e-53 | -8.615850e-47 |
Msa0181410 | Msa0481380 | 0.853568 | 2.192921e-61 | -8.615850e-47 |
Msa0182930 | Msa0481380 | 0.814623 | 1.402087e-51 | -8.615850e-47 |
Msa0185640 | Msa0481380 | -0.804925 | 1.709267e-49 | -8.615850e-47 |
Msa0198440 | Msa0481380 | 0.805282 | 1.439116e-49 | -8.615850e-47 |
Msa0207000 | Msa0481380 | 0.812601 | 3.905423e-51 | -8.615850e-47 |
Msa0371420 | Msa0481380 | -0.839066 | 1.978648e-57 | -8.615850e-47 |
Msa0377280 | Msa0481380 | 0.833199 | 6.117721e-56 | -8.615850e-47 |
Msa0387790 | Msa0481380 | 0.800215 | 1.599833e-48 | -8.615850e-47 |
Msa0404690 | Msa0481380 | 0.826049 | 3.357951e-54 | -8.615850e-47 |
Msa0411000 | Msa0481380 | 0.809914 | 1.494721e-50 | -8.615850e-47 |
Msa0413740 | Msa0481380 | 0.802513 | 5.413189e-49 | -8.615850e-47 |
Msa0418430 | Msa0481380 | 0.819667 | 1.029981e-52 | -8.615850e-47 |
Msa0419620 | Msa0481380 | -0.826457 | 2.684112e-54 | -8.615850e-47 |
Msa0455230 | Msa0481380 | 0.808494 | 3.012964e-50 | -8.615850e-47 |
Msa0462590 | Msa0481380 | 0.829202 | 5.872100e-55 | -8.615850e-47 |
Msa0465680 | Msa0481380 | -0.825335 | 4.959434e-54 | -8.615850e-47 |
Msa0469270 | Msa0481380 | 0.802729 | 4.887080e-49 | -8.615850e-47 |
Msa0481380 | Msa0505390 | 0.803415 | 3.524862e-49 | -8.615850e-47 |
Msa0481380 | Msa0511720 | -0.809121 | 2.212633e-50 | -8.615850e-47 |
Msa0481380 | Msa0526640 | -0.802487 | 5.480197e-49 | -8.615850e-47 |
Msa0481380 | Msa0535030 | 0.803415 | 3.524662e-49 | -8.615850e-47 |
Msa0481380 | Msa0535060 | 0.804442 | 2.155759e-49 | -8.615850e-47 |
Msa0481380 | Msa0540320 | 0.817082 | 3.964688e-52 | -8.615850e-47 |
Msa0481380 | Msa0549740 | 0.802836 | 4.644581e-49 | -8.615850e-47 |
Msa0481380 | Msa0556040 | 0.808428 | 3.112558e-50 | -8.615850e-47 |
Msa0481380 | Msa0576600 | 0.835463 | 1.653745e-56 | -8.615850e-47 |
Msa0481380 | Msa0577230 | 0.821998 | 2.996236e-53 | -8.615850e-47 |
Msa0481380 | Msa0582110 | 0.835594 | 1.531986e-56 | -8.615850e-47 |
Msa0481380 | Msa0596100 | 0.832809 | 7.647807e-56 | -8.615850e-47 |
Msa0481380 | Msa0617830 | 0.806817 | 6.840660e-50 | -8.615850e-47 |
Msa0481380 | Msa0620640 | 0.809476 | 1.856879e-50 | -8.615850e-47 |
Msa0481380 | Msa0621890 | 0.805415 | 1.349737e-49 | -8.615850e-47 |
Msa0481380 | Msa0624730 | 0.839016 | 2.038238e-57 | -8.615850e-47 |
Msa0481380 | Msa0626230 | 0.831158 | 1.956300e-55 | -8.615850e-47 |
Msa0481380 | Msa0638280 | 0.806695 | 7.258831e-50 | -8.615850e-47 |
Msa0481380 | Msa0638320 | 0.805373 | 1.377685e-49 | -8.615850e-47 |
Msa0481380 | Msa0657670 | 0.809503 | 1.832015e-50 | -8.615850e-47 |
Msa0481380 | Msa0674220 | 0.827848 | 1.246785e-54 | -8.615850e-47 |
Msa0481380 | Msa0677270 | 0.802050 | 6.743562e-49 | -8.615850e-47 |
Msa0481380 | Msa0700070 | 0.802294 | 6.005307e-49 | -8.615850e-47 |
Msa0481380 | Msa0707780 | 0.802918 | 4.465123e-49 | -8.615850e-47 |
Msa0481380 | Msa0714340 | 0.801936 | 7.115237e-49 | -8.615850e-47 |
Msa0481380 | Msa0714380 | 0.806644 | 7.443543e-50 | -8.615850e-47 |
Msa0481380 | Msa0714600 | 0.841529 | 4.496952e-58 | -8.615850e-47 |
Msa0481380 | Msa0722930 | 0.823884 | 1.089338e-53 | -8.615850e-47 |
Msa0481380 | Msa0723140 | 0.824622 | 7.306752e-54 | -8.615850e-47 |
Msa0481380 | Msa0724050 | 0.802622 | 5.140541e-49 | -8.615850e-47 |
Msa0481380 | Msa0739610 | 0.806493 | 8.010339e-50 | -8.615850e-47 |
Msa0481380 | Msa0743640 | 0.809448 | 1.882741e-50 | -8.615850e-47 |
Msa0481380 | Msa0743650 | 0.827919 | 1.199277e-54 | -8.615850e-47 |
Msa0481380 | Msa0750380 | 0.826678 | 2.377310e-54 | -8.615850e-47 |
Msa0481380 | Msa0768490 | 0.831441 | 1.666268e-55 | -8.615850e-47 |
Msa0481380 | Msa0789270 | 0.819153 | 1.348740e-52 | -8.615850e-47 |
Msa0481380 | Msa0789280 | 0.819390 | 1.190832e-52 | -8.615850e-47 |
Msa0481380 | Msa0789290 | 0.820451 | 6.810429e-53 | -8.615850e-47 |
Msa0481380 | Msa0789300 | 0.823334 | 1.464444e-53 | -8.615850e-47 |
Msa0481380 | Msa0792510 | 0.801149 | 1.031751e-48 | -8.615850e-47 |
Msa0481380 | Msa0828570 | 0.846408 | 2.213713e-59 | -8.615850e-47 |
Msa0481380 | Msa0830720 | 0.827005 | 1.986511e-54 | -8.615850e-47 |
Msa0481380 | Msa0847200 | 0.851733 | 7.320962e-61 | -8.615850e-47 |
Msa0481380 | Msa0863760 | 0.806176 | 9.340200e-50 | -8.615850e-47 |
Msa0481380 | Msa0863770 | 0.830379 | 3.036547e-55 | -8.615850e-47 |
Msa0481380 | Msa0899700 | 0.802273 | 6.066939e-49 | -8.615850e-47 |
Msa0481380 | Msa0903730 | 0.812176 | 4.837286e-51 | -8.615850e-47 |
Msa0481380 | Msa0907700 | 0.815638 | 8.345635e-52 | -8.615850e-47 |
Msa0481380 | Msa0934830 | 0.802315 | 5.947616e-49 | -8.615850e-47 |
Msa0481380 | Msa0961420 | -0.824149 | 9.439615e-54 | -8.615850e-47 |
Msa0481380 | Msa0964680 | 0.852130 | 5.650098e-61 | -8.615850e-47 |
Msa0481380 | Msa1001450 | 0.825523 | 4.475763e-54 | -8.615850e-47 |
Msa0481380 | Msa1016670 | 0.825217 | 5.287271e-54 | -8.615850e-47 |
Msa0481380 | Msa1032350 | 0.833634 | 4.764419e-56 | -8.615850e-47 |
Msa0481380 | Msa1036390 | 0.810543 | 1.094167e-50 | -8.615850e-47 |
Msa0481380 | Msa1043870 | 0.812851 | 3.443683e-51 | -8.615850e-47 |
Msa0481380 | Msa1046610 | 0.800015 | 1.757231e-48 | -8.615850e-47 |
Msa0481380 | Msa1058010 | 0.825509 | 4.509907e-54 | -8.615850e-47 |
Msa0481380 | Msa1072350 | 0.814634 | 1.394196e-51 | -8.615850e-47 |
Msa0481380 | Msa1076680 | 0.800954 | 1.131060e-48 | -8.615850e-47 |
Msa0481380 | Msa1102540 | 0.818204 | 2.214506e-52 | -8.615850e-47 |
Msa0481380 | Msa1111630 | 0.819302 | 1.247191e-52 | -8.615850e-47 |
Msa0481380 | Msa1112000 | 0.801819 | 7.520513e-49 | -8.615850e-47 |
Msa0481380 | Msa1113200 | 0.800141 | 1.656647e-48 | -8.615850e-47 |
Msa0481380 | Msa1118140 | 0.826369 | 2.817314e-54 | -8.615850e-47 |
Msa0481380 | Msa1130650 | 0.814527 | 1.471993e-51 | -8.615850e-47 |
Msa0481380 | Msa1184050 | 0.821008 | 5.071678e-53 | -8.615850e-47 |
Msa0481380 | Msa1204980 | -0.801120 | 1.046199e-48 | -8.615850e-47 |
Msa0481380 | Msa1205010 | -0.805720 | 1.164940e-49 | -8.615850e-47 |
Msa0481380 | Msa1211110 | 0.826735 | 2.304442e-54 | -8.615850e-47 |
Msa0481380 | Msa1220230 | 0.812773 | 3.581681e-51 | -8.615850e-47 |
Msa0481380 | Msa1221200 | -0.824689 | 7.044489e-54 | -8.615850e-47 |
Msa0481380 | Msa1244090 | 0.810831 | 9.477544e-51 | -8.615850e-47 |
Msa0481380 | Msa1245310 | 0.823855 | 1.106199e-53 | -8.615850e-47 |
Msa0481380 | Msa1256540 | -0.810541 | 1.095346e-50 | -8.615850e-47 |
Msa0481380 | Msa1261470 | 0.812480 | 4.150519e-51 | -8.615850e-47 |
Msa0481380 | Msa1265960 | 0.813135 | 2.982636e-51 | -8.615850e-47 |
Msa0481380 | Msa1282920 | 0.807595 | 4.680828e-50 | -8.615850e-47 |
Msa0481380 | Msa1296960 | -0.804083 | 2.561580e-49 | -8.615850e-47 |
Msa0481380 | Msa1304180 | 0.815530 | 8.820441e-52 | -8.615850e-47 |
Msa0481380 | Msa1329990 | 0.807231 | 5.591542e-50 | -8.615850e-47 |
Msa0481380 | Msa1335970 | -0.819018 | 1.447371e-52 | -8.615850e-47 |
Msa0481380 | Msa1358870 | -0.821634 | 3.637543e-53 | -8.615850e-47 |
Msa0481380 | Msa1397540 | 0.805210 | 1.489729e-49 | -8.615850e-47 |
Msa0481380 | Msa1421870 | 0.818359 | 2.043054e-52 | -8.615850e-47 |
Msa0481380 | Msa1427830 | 0.847530 | 1.091223e-59 | -8.615850e-47 |
Msa0481380 | Msa1428420 | 0.836838 | 7.399360e-57 | -8.615850e-47 |
Msa0481380 | Msa1431000 | 0.809861 | 1.534763e-50 | -8.615850e-47 |
Msa0481380 | Msa1431730 | 0.806578 | 7.683378e-50 | -8.615850e-47 |
Msa0481380 | Msa1440610 | 0.808624 | 2.826067e-50 | -8.615850e-47 |
Msa0481380 | Msa1449740 | 0.801419 | 9.083641e-49 | -8.615850e-47 |
Msa0481380 | Msa1450020 | 0.816952 | 4.240218e-52 | -8.615850e-47 |
Msa0481380 | Msa1454110 | 0.833263 | 5.895879e-56 | -8.615850e-47 |
Msa0481380 | Msa1456810 | 0.836089 | 1.148040e-56 | -8.615850e-47 |
Msa0481380 | Msa1460310 | -0.802009 | 6.873489e-49 | -8.615850e-47 |
Msa0481380 | Msa1464560 | 0.822495 | 2.297117e-53 | -8.615850e-47 |
Msa0240780 | Msa0481380 | 0.831296 | 1.809210e-55 | -8.615850e-47 |
Msa0252180 | Msa0481380 | 0.809717 | 1.648105e-50 | -8.615850e-47 |
Msa0258670 | Msa0481380 | -0.806661 | 7.382266e-50 | -8.615850e-47 |
Msa0265210 | Msa0481380 | 0.816091 | 6.612106e-52 | -8.615850e-47 |
Msa0278670 | Msa0481380 | 0.804132 | 2.501255e-49 | -8.615850e-47 |
Msa0282170 | Msa0481380 | 0.817728 | 2.837226e-52 | -8.615850e-47 |
Msa0288240 | Msa0481380 | 0.803769 | 2.976351e-49 | -8.615850e-47 |
Msa0288330 | Msa0481380 | 0.811987 | 5.317490e-51 | -8.615850e-47 |
Msa0296160 | Msa0481380 | 0.804198 | 2.423243e-49 | -8.615850e-47 |
Msa0302990 | Msa0481380 | -0.802450 | 5.577677e-49 | -8.615850e-47 |
Msa0303200 | Msa0481380 | 0.804488 | 2.109169e-49 | -8.615850e-47 |
Msa0318070 | Msa0481380 | 0.800159 | 1.642390e-48 | -8.615850e-47 |
Msa0318270 | Msa0481380 | 0.801615 | 8.284109e-49 | -8.615850e-47 |
Msa0318310 | Msa0481380 | 0.800516 | 1.389656e-48 | -8.615850e-47 |
Msa0325470 | Msa0481380 | 0.817490 | 3.210654e-52 | -8.615850e-47 |
Msa0326670 | Msa0481380 | 0.802060 | 6.711512e-49 | -8.615850e-47 |
Msa0334570 | Msa0481380 | 0.802968 | 4.361384e-49 | -8.615850e-47 |
Msa0336270 | Msa0481380 | 0.822548 | 2.233514e-53 | -8.615850e-47 |
Msa0342200 | Msa0481380 | 0.809998 | 1.433829e-50 | -8.615850e-47 |
Msa0342340 | Msa0481380 | -0.806769 | 7.003442e-50 | -8.615850e-47 |
Msa0363460 | Msa0481380 | 0.807881 | 4.069521e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0481380 | MtrunA17_Chr8g0358881 | 86.635 | 419 | 5 | 2 | 1 | 369 | 1 | 418 | 0.0 | 714 |
Msa0481380 | MtrunA17_Chr2g0299491 | 48.418 | 316 | 143 | 7 | 32 | 331 | 18 | 329 | 1.03e-88 | 273 |
Msa0481380 | MtrunA17_Chr4g0071061 | 54.511 | 266 | 114 | 5 | 71 | 331 | 60 | 323 | 4.45e-84 | 261 |
Msa0481380 | MtrunA17_Chr7g0257041 | 37.685 | 337 | 192 | 12 | 6 | 330 | 3 | 333 | 1.47e-55 | 187 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0481380 | AT1G79050.1 | 79.701 | 335 | 62 | 3 | 6 | 334 | 15 | 349 | 0.0 | 529 |
Msa0481380 | AT1G79050.2 | 79.205 | 327 | 54 | 3 | 6 | 322 | 15 | 337 | 0.0 | 509 |
Msa0481380 | AT2G19490.1 | 53.480 | 273 | 120 | 5 | 68 | 335 | 58 | 328 | 2.33e-85 | 265 |
Msa0481380 | AT3G10140.1 | 40.702 | 285 | 159 | 5 | 51 | 330 | 48 | 327 | 2.19e-52 | 179 |
Msa0481380 | AT3G32920.1 | 50.495 | 202 | 79 | 5 | 99 | 299 | 12 | 193 | 4.67e-49 | 165 |
Msa0481380 | AT3G32920.5 | 47.590 | 166 | 71 | 2 | 99 | 263 | 12 | 162 | 9.28e-40 | 139 |
Msa0481380 | AT3G32920.3 | 50.360 | 139 | 53 | 3 | 99 | 236 | 12 | 135 | 1.08e-30 | 116 |
Msa0481380 | AT3G32920.2 | 50.360 | 139 | 53 | 3 | 99 | 236 | 12 | 135 | 1.08e-30 | 116 |
Msa0481380 | AT3G32920.4 | 52.703 | 74 | 35 | 0 | 163 | 236 | 9 | 82 | 5.89e-14 | 68.9 |
Find 112 sgRNAs with CRISPR-Local
Find 682 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTGGTCTTCCCACTGCTTTC+TGG | 0.112610 | 3_3:-87276123 | None:intergenic |
GCACTCTTACACGAACTTTA+AGG | 0.157262 | 3_3:-87277291 | None:intergenic |
TATTCTTTCTTCAACATAAA+TGG | 0.167081 | 3_3:+87284065 | Msa0481380:three_prime_UTR |
CAAGTACCTTATATCTTATT+TGG | 0.169890 | 3_3:-87276822 | None:intergenic |
TATATCTGTTTCCAGATATT+TGG | 0.171997 | 3_3:+87276099 | Msa0481380:intron |
TTGTAGATTGGTGTCTATTA+TGG | 0.178441 | 3_3:+87276966 | Msa0481380:intron |
ATTCCACCACTTGTCACTTC+TGG | 0.258174 | 3_3:-87276993 | None:intergenic |
AGAATGAAAGTGTGGGGTTT+TGG | 0.262089 | 3_3:-87273211 | None:intergenic |
CTTTGACTCAACCAGTTTAA+TGG | 0.264392 | 3_3:+87284220 | Msa0481380:three_prime_UTR |
ACCTCTACAATTCTTCCTTT+TGG | 0.272094 | 3_3:-87275810 | None:intergenic |
CGACTAGAAATTCGTTCTAT+AGG | 0.287820 | 3_3:+87277041 | Msa0481380:CDS |
TTGGCTTTAGACTTTGCTTT+AGG | 0.292232 | 3_3:+87275777 | Msa0481380:CDS |
GCCGAATTTGATATTTCATT+TGG | 0.304834 | 3_3:+87279565 | Msa0481380:CDS |
TTGACGCTCGCTTCGTTGAT+AGG | 0.306271 | 3_3:+87273371 | Msa0481380:CDS |
TGGAGGTAGCTTTAATGATT+AGG | 0.316920 | 3_3:+87284091 | Msa0481380:three_prime_UTR |
GCCAACTTCTTCATCTCCTT+TGG | 0.320234 | 3_3:-87277269 | None:intergenic |
AGATTGCAGGTTTATAGAAT+TGG | 0.329733 | 3_3:+87284039 | Msa0481380:three_prime_UTR |
AAGAGTACAACCAGCTTTAG+AGG | 0.344065 | 3_3:-87276788 | None:intergenic |
TCTGAACCAAATAAGATATA+AGG | 0.346004 | 3_3:+87276816 | Msa0481380:CDS |
ATTAATGTATAGGGAGAGAT+TGG | 0.361959 | 3_3:+87276700 | Msa0481380:intron |
TCCAAATGAAATATCAAATT+CGG | 0.363933 | 3_3:-87279566 | None:intergenic |
TTCTTCAACATAAATGGAAC+TGG | 0.365912 | 3_3:+87284071 | Msa0481380:three_prime_UTR |
TCAAATTCGGCTACTTTGTA+AGG | 0.376182 | 3_3:-87279553 | None:intergenic |
CACCGGTTCTACCATTAAAC+TGG | 0.382041 | 3_3:-87284231 | None:intergenic |
AAGTTTGGGTGATAGATTGC+AGG | 0.396964 | 3_3:+87284026 | Msa0481380:three_prime_UTR |
GATTGTGTTGTGAAAGAAAC+AGG | 0.401283 | 3_3:-87273073 | None:intergenic |
AATGCAGCAAATGGGATTGC+AGG | 0.404303 | 3_3:+87276723 | Msa0481380:CDS |
AGAGATTGGAATGCAGCAAA+TGG | 0.404804 | 3_3:+87276714 | Msa0481380:CDS |
GACTAGAAATTCGTTCTATA+GGG | 0.407782 | 3_3:+87277042 | Msa0481380:CDS |
AAAAGGTAGTGTTACGAGAT+TGG | 0.413731 | 3_3:+87275549 | Msa0481380:CDS |
GTCCACGCAAATGAGATCTA+TGG | 0.418614 | 3_3:-87276557 | None:intergenic |
TTAGACTTTGCTTTAGGTGG+TGG | 0.421314 | 3_3:+87275783 | Msa0481380:CDS |
GTTCACTTCAACTTCTGCTC+GGG | 0.424046 | 3_3:-87276599 | None:intergenic |
AGTTTAATCACCAGTTCAAC+CGG | 0.425623 | 3_3:-87284260 | None:intergenic |
AATGATATAAACAACTCTTT+CGG | 0.432683 | 3_3:+87275526 | Msa0481380:CDS |
ATAAACAACTCTTTCGGAAA+AGG | 0.432713 | 3_3:+87275532 | Msa0481380:CDS |
TCGTATGTGAAAAGCTTGTT+TGG | 0.444340 | 3_3:-87283928 | None:intergenic |
GGTGATTAAACTGATGCCTT+TGG | 0.444581 | 3_3:+87284271 | Msa0481380:three_prime_UTR |
TAAACATATATCAATGGAAC+AGG | 0.445063 | 3_3:-87284131 | None:intergenic |
CAAGCTTTGCGTAAGATGTC+TGG | 0.449604 | 3_3:+87276760 | Msa0481380:CDS |
AAAGGTAGTGTTACGAGATT+GGG | 0.449775 | 3_3:+87275550 | Msa0481380:CDS |
AAAGAGTGGAACTTCTTGAT+AGG | 0.452809 | 3_3:-87273268 | None:intergenic |
TGACGCTCGCTTCGTTGATA+GGG | 0.457665 | 3_3:+87273372 | Msa0481380:CDS |
TCTATTCCAGCAAAAGGCTC+TGG | 0.457882 | 3_3:+87275492 | Msa0481380:intron |
AACCAGTTTAATGGTAGAAC+CGG | 0.466197 | 3_3:+87284229 | Msa0481380:three_prime_UTR |
AGAGCCATCTCTCCATGATC+TGG | 0.469294 | 3_3:-87276384 | None:intergenic |
GACATGTTTAGAAGAAGAAG+AGG | 0.470961 | 3_3:-87273308 | None:intergenic |
CTGCAATAGCATGAAGTGCT+AGG | 0.471959 | 3_3:-87276146 | None:intergenic |
CTTTGGTTGGGTAGTCGGAC+TGG | 0.482485 | 3_3:+87284288 | Msa0481380:three_prime_UTR |
TTGATTTCTGTTTAGGCCAA+AGG | 0.483456 | 3_3:+87277253 | Msa0481380:intron |
CAGACATCTTACGCAAAGCT+TGG | 0.486162 | 3_3:-87276759 | None:intergenic |
GTCTAAAGCCAAACATCCAC+TGG | 0.486365 | 3_3:-87275766 | None:intergenic |
GCAGATCGTATGTGTAGATC+TGG | 0.491077 | 3_3:+87276532 | Msa0481380:CDS |
TTAGGTGGTGGTCTTCCAAA+AGG | 0.491192 | 3_3:+87275795 | Msa0481380:CDS |
GGTGATGCAACCGGTTGAAC+TGG | 0.496620 | 3_3:+87284250 | Msa0481380:three_prime_UTR |
AAATTGATATGCAGGTAGTT+CGG | 0.498228 | 3_3:+87283882 | Msa0481380:intron |
GGTAGAACCGGTGATGCAAC+CGG | 0.498353 | 3_3:+87284241 | Msa0481380:three_prime_UTR |
GCTTTAGACTTTGCTTTAGG+TGG | 0.499082 | 3_3:+87275780 | Msa0481380:CDS |
GTTTATGTCATGCAGAAGCT+AGG | 0.506088 | 3_3:+87276267 | Msa0481380:intron |
GATGCCTTTGGTTGGGTAGT+CGG | 0.506126 | 3_3:+87284283 | Msa0481380:three_prime_UTR |
TTAAACTGATGCCTTTGGTT+GGG | 0.506747 | 3_3:+87284276 | Msa0481380:three_prime_UTR |
AGTTCAACCGGTTGCATCAC+CGG | 0.508513 | 3_3:-87284248 | None:intergenic |
TCATGCTATTGCAGAAGTAC+AGG | 0.512089 | 3_3:+87276155 | Msa0481380:CDS |
ATCGTGTGCCAACCAGATCA+TGG | 0.514896 | 3_3:+87276372 | Msa0481380:CDS |
GAAGAAGAGGAAGCAAAGAG+AGG | 0.515096 | 3_3:-87273295 | None:intergenic |
AAGGTAAAATTGAAATTCAA+AGG | 0.526847 | 3_3:+87284192 | Msa0481380:three_prime_UTR |
AAATAGAAGAGAAGAAGAAG+AGG | 0.529200 | 3_3:-87273242 | None:intergenic |
TGTTCACTTCAACTTCTGCT+CGG | 0.531981 | 3_3:-87276600 | None:intergenic |
GAGATTGGAATGCAGCAAAT+GGG | 0.536381 | 3_3:+87276715 | Msa0481380:CDS |
TTTACATAAACATATATCAA+TGG | 0.537292 | 3_3:-87284137 | None:intergenic |
CAAAGAGAGGAGGCAAAGAG+TGG | 0.537991 | 3_3:-87273282 | None:intergenic |
GTTCGGTCTTCAATGAATGA+TGG | 0.538565 | 3_3:+87283899 | Msa0481380:CDS |
TTTGATATTTCATTTGGAGA+GGG | 0.541497 | 3_3:+87279571 | Msa0481380:CDS |
TCTGGAAATGCCTCTAAAGC+TGG | 0.543928 | 3_3:+87276778 | Msa0481380:CDS |
TTCACATACGAAGAATAGTC+CGG | 0.546219 | 3_3:+87283940 | Msa0481380:CDS |
GTTACGAGATTGGGCAGTGC+TGG | 0.546984 | 3_3:+87275559 | Msa0481380:CDS |
TCGGGGAGTGAGAGCTGAGA+CGG | 0.547108 | 3_3:-87276581 | None:intergenic |
ATTAAACTGATGCCTTTGGT+TGG | 0.556475 | 3_3:+87284275 | Msa0481380:three_prime_UTR |
CGCCATAGATCTCATTTGCG+TGG | 0.560134 | 3_3:+87276555 | Msa0481380:CDS |
GTGGTTTCAGAATGAAAGTG+TGG | 0.561918 | 3_3:-87273219 | None:intergenic |
TGCAATAGCATGAAGTGCTA+GGG | 0.565048 | 3_3:-87276145 | None:intergenic |
TGGTTTCAGAATGAAAGTGT+GGG | 0.565796 | 3_3:-87273218 | None:intergenic |
GCCAAAGGAGATGAAGAAGT+TGG | 0.567990 | 3_3:+87277268 | Msa0481380:CDS |
TTCACTTCAACTTCTGCTCG+GGG | 0.573704 | 3_3:-87276598 | None:intergenic |
CCAACCAGATCATGGAGAGA+TGG | 0.574272 | 3_3:+87276380 | Msa0481380:CDS |
CCTACCGCTTTAGAATATGC+TGG | 0.575256 | 3_3:-87276330 | None:intergenic |
GAAGAGGAAGCAAAGAGAGG+AGG | 0.578878 | 3_3:-87273292 | None:intergenic |
TCTTCGTCTTGATGAAGCAC+CGG | 0.579039 | 3_3:-87283959 | None:intergenic |
AATAGAAGAGAAGAAGAAGA+GGG | 0.581381 | 3_3:-87273241 | None:intergenic |
CCATCTCTCCATGATCTGGT+TGG | 0.583917 | 3_3:-87276380 | None:intergenic |
ATTTGATATTTCATTTGGAG+AGG | 0.585341 | 3_3:+87279570 | Msa0481380:CDS |
AGAAGAGAAGAAGAAGAGGG+TGG | 0.586102 | 3_3:-87273238 | None:intergenic |
ACGAGATTGGGCAGTGCTGG+TGG | 0.586767 | 3_3:+87275562 | Msa0481380:CDS |
AATCCAGAAGTGACAAGTGG+TGG | 0.590086 | 3_3:+87276990 | Msa0481380:CDS |
TGGAGAGGGAGTCAATAAGC+TGG | 0.603916 | 3_3:+87279585 | Msa0481380:CDS |
TTCAACATAAATGGAACTGG+AGG | 0.610428 | 3_3:+87284074 | Msa0481380:three_prime_UTR |
CCAGCATATTCTAAAGCGGT+AGG | 0.611416 | 3_3:+87276330 | Msa0481380:CDS |
GGTTTCAGAATGAAAGTGTG+GGG | 0.614101 | 3_3:-87273217 | None:intergenic |
TGTAAGAGTGCAAAAGAGCA+AGG | 0.621297 | 3_3:+87277303 | Msa0481380:CDS |
TGATCCAGCATATTCTAAAG+CGG | 0.621566 | 3_3:+87276326 | Msa0481380:CDS |
AATAGCATGAAGTGCTAGGG+TGG | 0.629963 | 3_3:-87276142 | None:intergenic |
TCCAAAAGGAAGAATTGTAG+AGG | 0.632337 | 3_3:+87275809 | Msa0481380:CDS |
TATTTGGACCAGAAAGCAGT+GGG | 0.635930 | 3_3:+87276115 | Msa0481380:CDS |
TATATGTTTATGTAAACTGA+TGG | 0.638196 | 3_3:+87284144 | Msa0481380:three_prime_UTR |
AAGATTCAATGCGAACTCAA+CGG | 0.646437 | 3_3:+87273331 | Msa0481380:CDS |
TTTGAAGAAAGTCTGTGATG+AGG | 0.647381 | 3_3:+87283986 | Msa0481380:exon |
ATATTCTAAAGCGGTAGGAG+TGG | 0.652399 | 3_3:+87276335 | Msa0481380:CDS |
TATGTCATGCAGAAGCTAGG+AGG | 0.653728 | 3_3:+87276270 | Msa0481380:intron |
TCTAAAGCCAAACATCCACT+GGG | 0.679556 | 3_3:-87275765 | None:intergenic |
GGAAATCCAGAAGTGACAAG+TGG | 0.683852 | 3_3:+87276987 | Msa0481380:CDS |
ATATTTGGACCAGAAAGCAG+TGG | 0.688023 | 3_3:+87276114 | Msa0481380:CDS |
CAGTCCGACTACCCAACCAA+AGG | 0.691295 | 3_3:-87284287 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTATAAAATTTTGTCTAAA+TGG | + | chr3_3:87274946-87274965 | Msa0481380:intron | 10.0% |
!! | ATTATATAACAAATAATGAA+GGG | - | chr3_3:87274982-87275001 | None:intergenic | 10.0% |
!! | AATTATATAACAAATAATGA+AGG | - | chr3_3:87274983-87275002 | None:intergenic | 10.0% |
!!! | TCATTATTTGTTATATAATT+TGG | + | chr3_3:87274983-87275002 | Msa0481380:intron | 10.0% |
!!! | GTTATATATGTAATTTTTTT+GGG | + | chr3_3:87275121-87275140 | Msa0481380:intron | 10.0% |
!!! | TTATATATGTAATTTTTTTG+GGG | + | chr3_3:87275122-87275141 | Msa0481380:intron | 10.0% |
!!! | GTACTTTTATTATATAATTT+AGG | + | chr3_3:87276647-87276666 | Msa0481380:intron | 10.0% |
!!! | ACTTTTATTATATAATTTAG+GGG | + | chr3_3:87276649-87276668 | Msa0481380:intron | 10.0% |
!!! | ATTATTTATAAGAGAATTTT+TGG | + | chr3_3:87278187-87278206 | Msa0481380:intron | 10.0% |
!!! | TTTAACATTTTCTTATAAAT+TGG | - | chr3_3:87278214-87278233 | None:intergenic | 10.0% |
!! | AAAATGAAAATTCAAAATAA+TGG | - | chr3_3:87279653-87279672 | None:intergenic | 10.0% |
!!! | TTTTCTATTTATTTAAGATT+AGG | - | chr3_3:87280623-87280642 | None:intergenic | 10.0% |
!! | TCTTAAATAAATAGAAAATT+AGG | + | chr3_3:87280625-87280644 | Msa0481380:intron | 10.0% |
!!! | AATAATAAATACTTTTGAAA+TGG | - | chr3_3:87280958-87280977 | None:intergenic | 10.0% |
!!! | TAATAAAAACTTTTGAAATA+TGG | - | chr3_3:87282421-87282440 | None:intergenic | 10.0% |
!!! | TCTTGTTATTTTTTGAAAAA+TGG | + | chr3_3:87273171-87273190 | Msa0481380:exon | 15.0% |
!!! | TATTTTTTGAAAAATGGATT+TGG | + | chr3_3:87273177-87273196 | Msa0481380:exon | 15.0% |
!!! | TCATTCTTTTTTATTTTTTC+TGG | + | chr3_3:87273956-87273975 | Msa0481380:intron | 15.0% |
!! | ATACAGTAAAAAAACTATTT+AGG | - | chr3_3:87274338-87274357 | None:intergenic | 15.0% |
!!! | TTAGACAAAATTTTATAAAG+CGG | - | chr3_3:87274945-87274964 | None:intergenic | 15.0% |
!!! | TATTTGTTATATAATTTGGT+TGG | + | chr3_3:87274987-87275006 | Msa0481380:intron | 15.0% |
!!! | GGTTATATATGTAATTTTTT+TGG | + | chr3_3:87275120-87275139 | Msa0481380:intron | 15.0% |
!! | AAATAACCTACTATATTTAT+TGG | - | chr3_3:87275413-87275432 | None:intergenic | 15.0% |
!!! | TTATTTGTTACATTGTTAAT+GGG | + | chr3_3:87275427-87275446 | Msa0481380:intron | 15.0% |
!!! | ATAAATTGATAATTATCATC+AGG | - | chr3_3:87276213-87276232 | None:intergenic | 15.0% |
!! | TATTGTAATCAAAAGATATT+AGG | - | chr3_3:87277198-87277217 | None:intergenic | 15.0% |
!! | AATTTAAAAAACTTGTAGTA+AGG | + | chr3_3:87277419-87277438 | Msa0481380:intron | 15.0% |
!! | TATAAATAAGTTTATAAGGT+GGG | - | chr3_3:87277477-87277496 | None:intergenic | 15.0% |
!! | GAGAAGAATAAAAATAATTA+TGG | + | chr3_3:87277662-87277681 | Msa0481380:intron | 15.0% |
!! | TTTACTATTTACTTAGAATT+AGG | - | chr3_3:87278086-87278105 | None:intergenic | 15.0% |
!! | TCTAAGTAAATAGTAAAATT+AGG | + | chr3_3:87278089-87278108 | Msa0481380:intron | 15.0% |
!! | AATTAGTAGTATAGAAATTA+AGG | + | chr3_3:87278129-87278148 | Msa0481380:intron | 15.0% |
!! | AATTCTCTTATAAATAATAC+CGG | - | chr3_3:87278185-87278204 | None:intergenic | 15.0% |
!!! | TATTATTTTGAAAAGACTTT+AGG | + | chr3_3:87279225-87279244 | Msa0481380:intron | 15.0% |
!!! | ATTATTTTGAAAAGACTTTA+GGG | + | chr3_3:87279226-87279245 | Msa0481380:intron | 15.0% |
!!! | GTCTTAATTTTTTTTTTTTG+TGG | + | chr3_3:87279493-87279512 | Msa0481380:intron | 15.0% |
!!! | TTAATTTTTTTTTTTTGTGG+AGG | + | chr3_3:87279496-87279515 | Msa0481380:intron | 15.0% |
!! | ATAATAATAGCTAAGTATTA+TGG | + | chr3_3:87280657-87280676 | Msa0481380:intron | 15.0% |
!!! | GGATTTTTTATAAAATAAGA+AGG | - | chr3_3:87280983-87281002 | None:intergenic | 15.0% |
!! | TCACACTATTATATTTATAA+TGG | - | chr3_3:87281827-87281846 | None:intergenic | 15.0% |
!! | TTAAAAAGTAACGTTTATAT+AGG | - | chr3_3:87282685-87282704 | None:intergenic | 15.0% |
!! | TTTACATAAACATATATCAA+TGG | - | chr3_3:87284140-87284159 | None:intergenic | 15.0% |
!! | AGAATGACAGATTAAAAATT+CGG | - | chr3_3:87273943-87273962 | None:intergenic | 20.0% |
!! | ATGAAATTAAGAAATGCTAT+AGG | + | chr3_3:87274282-87274301 | Msa0481380:intron | 20.0% |
!!! | GTTTTTTTTAATGGCAAATT+AGG | + | chr3_3:87274572-87274591 | Msa0481380:intron | 20.0% |
!! | AGTTCTCATTATAAAGAAAA+TGG | + | chr3_3:87274624-87274643 | Msa0481380:intron | 20.0% |
!!! | TAGACAAAATTTTATAAAGC+GGG | - | chr3_3:87274944-87274963 | None:intergenic | 20.0% |
!!! | AATTTTAATTATTGCTCTAC+TGG | + | chr3_3:87275291-87275310 | Msa0481380:intron | 20.0% |
!!! | GTTATTTGTTACATTGTTAA+TGG | + | chr3_3:87275426-87275445 | Msa0481380:intron | 20.0% |
!! | AATGATATAAACAACTCTTT+CGG | + | chr3_3:87275526-87275545 | Msa0481380:CDS | 20.0% |
!! | TCAAACTATATAAAACAGTT+TGG | - | chr3_3:87275652-87275671 | None:intergenic | 20.0% |
!!! | TTCTAAGCAAAATGATTTTA+GGG | + | chr3_3:87275948-87275967 | Msa0481380:intron | 20.0% |
!! | ATTGAAGTATAAATAAGTAG+AGG | - | chr3_3:87276059-87276078 | None:intergenic | 20.0% |
!! | TCTACTTATTTATACTTCAA+TGG | + | chr3_3:87276058-87276077 | Msa0481380:intron | 20.0% |
!! | CTACTTATTTATACTTCAAT+GGG | + | chr3_3:87276059-87276078 | Msa0481380:intron | 20.0% |
!! | TTCAGATATATAAAATACTG+TGG | - | chr3_3:87277332-87277351 | None:intergenic | 20.0% |
!! | GATGAAAAAAATAACACAAA+AGG | - | chr3_3:87277361-87277380 | None:intergenic | 20.0% |
!! | AAAAATTCATGAATAATGCA+TGG | - | chr3_3:87277386-87277405 | None:intergenic | 20.0% |
!! | ATAAATAAGTTTATAAGGTG+GGG | - | chr3_3:87277476-87277495 | None:intergenic | 20.0% |
!! | CTATAAATAAGTTTATAAGG+TGG | - | chr3_3:87277478-87277497 | None:intergenic | 20.0% |
!! | CACCTTATAAACTTATTTAT+AGG | + | chr3_3:87277476-87277495 | Msa0481380:intron | 20.0% |
!! | ACTTATATACCTATAAATAG+GGG | - | chr3_3:87278061-87278080 | None:intergenic | 20.0% |
!! | GACTTATATACCTATAAATA+GGG | - | chr3_3:87278062-87278081 | None:intergenic | 20.0% |
!! | AGACTTATATACCTATAAAT+AGG | - | chr3_3:87278063-87278082 | None:intergenic | 20.0% |
!!! | AGAAAATGTTAAAGCTTTTA+AGG | + | chr3_3:87278221-87278240 | Msa0481380:intron | 20.0% |
!! | AAACCAAACAAAAATGATAT+TGG | + | chr3_3:87278613-87278632 | Msa0481380:intron | 20.0% |
!! | AACCAAACAAAAATGATATT+GGG | + | chr3_3:87278614-87278633 | Msa0481380:intron | 20.0% |
!!! | AAAAAAAAAAGATTTGGTTG+AGG | + | chr3_3:87279198-87279217 | Msa0481380:intron | 20.0% |
!!! | TTTTTGAGTTTACATAAAAC+TGG | - | chr3_3:87279290-87279309 | None:intergenic | 20.0% |
!!! | ATTTTCAAAAGCTAAAACAA+GGG | + | chr3_3:87279341-87279360 | Msa0481380:intron | 20.0% |
!! | ACAAAAATTATATCTGATTC+TGG | - | chr3_3:87279463-87279482 | None:intergenic | 20.0% |
!! | TCCAAATGAAATATCAAATT+CGG | - | chr3_3:87279569-87279588 | None:intergenic | 20.0% |
!! | ATGAATATTGTCTTAAAGAA+GGG | + | chr3_3:87279708-87279727 | Msa0481380:intron | 20.0% |
!! | CAATTATGATAATAAATCTG+TGG | + | chr3_3:87280058-87280077 | Msa0481380:intron | 20.0% |
!! | AACAGAATAAAAAAGAAACA+CGG | - | chr3_3:87280287-87280306 | None:intergenic | 20.0% |
!! | TAAAAATGAAAACTACTCTT+AGG | - | chr3_3:87280800-87280819 | None:intergenic | 20.0% |
!!! | AGTCTTGTATATCTATAAAT+AGG | + | chr3_3:87280869-87280888 | Msa0481380:intron | 20.0% |
!! | GTCTTGTATATCTATAAATA+GGG | + | chr3_3:87280870-87280889 | Msa0481380:intron | 20.0% |
!! | TCTTGTATATCTATAAATAG+GGG | + | chr3_3:87280871-87280890 | Msa0481380:intron | 20.0% |
!! | ATAAAATACTGAAACGATAT+TGG | - | chr3_3:87281591-87281610 | None:intergenic | 20.0% |
!! | TAGGAAAATTAACAATTAAC+TGG | - | chr3_3:87281753-87281772 | None:intergenic | 20.0% |
!!! | ATATTTTGTCACTTTTATTG+AGG | - | chr3_3:87281977-87281996 | None:intergenic | 20.0% |
!!! | TTTGTTCTTGATATGTTTTT+GGG | + | chr3_3:87282174-87282193 | Msa0481380:intron | 20.0% |
!!! | AGTTATATTTTCTCTTGAAA+GGG | + | chr3_3:87282210-87282229 | Msa0481380:intron | 20.0% |
!!! | AATACTAACTTCAAGTTTTA+TGG | - | chr3_3:87282346-87282365 | None:intergenic | 20.0% |
!!! | GTTTTTATTATTTCTCTTCT+TGG | + | chr3_3:87282431-87282450 | Msa0481380:intron | 20.0% |
!!! | AACTGAAGTGTAATTTTTTT+GGG | - | chr3_3:87282462-87282481 | None:intergenic | 20.0% |
!!! | TAACTGAAGTGTAATTTTTT+TGG | - | chr3_3:87282463-87282482 | None:intergenic | 20.0% |
!! | CAAATTATAGTGTAATTGTT+AGG | + | chr3_3:87282727-87282746 | Msa0481380:intron | 20.0% |
!!! | TTTAGTTAATTTTGCCTTTT+TGG | + | chr3_3:87283205-87283224 | Msa0481380:intron | 20.0% |
!!! | TTTGTTTGGTTTCATAAAAA+CGG | + | chr3_3:87283669-87283688 | Msa0481380:intron | 20.0% |
!! | AAAAGATTAAATTGATATGC+AGG | + | chr3_3:87283874-87283893 | Msa0481380:intron | 20.0% |
!!! | TTGATTTTTCTGATAAGTTT+GGG | + | chr3_3:87284012-87284031 | Msa0481380:three_prime_UTR | 20.0% |
!! | TATTCTTTCTTCAACATAAA+TGG | + | chr3_3:87284065-87284084 | Msa0481380:three_prime_UTR | 20.0% |
!! | TATATGTTTATGTAAACTGA+TGG | + | chr3_3:87284144-87284163 | Msa0481380:three_prime_UTR | 20.0% |
!! | AAACATAGAAACAAAAAGAA+AGG | + | chr3_3:87284173-87284192 | Msa0481380:three_prime_UTR | 20.0% |
!! | AAGGTAAAATTGAAATTCAA+AGG | + | chr3_3:87284192-87284211 | Msa0481380:three_prime_UTR | 20.0% |
! | AGAAAAGTAAAAGAGAAAAG+GGG | - | chr3_3:87273405-87273424 | None:intergenic | 25.0% |
! | CAGAAAAGTAAAAGAGAAAA+GGG | - | chr3_3:87273406-87273425 | None:intergenic | 25.0% |
!! | TATGAACAGTTTTACTAGTT+TGG | + | chr3_3:87273495-87273514 | Msa0481380:intron | 25.0% |
! | ACAAATCATAAGAAAGAGAT+AGG | - | chr3_3:87273743-87273762 | None:intergenic | 25.0% |
!! | TCTTTCTTATGATTTGTGTT+TGG | + | chr3_3:87273746-87273765 | Msa0481380:intron | 25.0% |
!! | CTTTCTTATGATTTGTGTTT+GGG | + | chr3_3:87273747-87273766 | Msa0481380:intron | 25.0% |
! | AATGACAGATTAAAAATTCG+GGG | - | chr3_3:87273941-87273960 | None:intergenic | 25.0% |
! | GAATGACAGATTAAAAATTC+GGG | - | chr3_3:87273942-87273961 | None:intergenic | 25.0% |
! | TACTGAATATATACAAGAGA+AGG | + | chr3_3:87273985-87274004 | Msa0481380:intron | 25.0% |
! | ACACACAAATCATATATTAG+AGG | + | chr3_3:87274145-87274164 | Msa0481380:intron | 25.0% |
! | TTGAGAAAAATGTTAACCAT+AGG | + | chr3_3:87274244-87274263 | Msa0481380:intron | 25.0% |
!! | TTTTACTGTATACACCAAAA+TGG | + | chr3_3:87274347-87274366 | Msa0481380:intron | 25.0% |
! | AGCCTTACAACTATAAAAAA+GGG | - | chr3_3:87274425-87274444 | None:intergenic | 25.0% |
! | AAGCCTTACAACTATAAAAA+AGG | - | chr3_3:87274426-87274445 | None:intergenic | 25.0% |
! | GTTGTATGATATTCAATTCT+AGG | + | chr3_3:87274451-87274470 | Msa0481380:intron | 25.0% |
!! | TAATTTCATTTTGTCAACTG+TGG | - | chr3_3:87274544-87274563 | None:intergenic | 25.0% |
! | ACAGTTGACAAAATGAAATT+AGG | + | chr3_3:87274543-87274562 | Msa0481380:intron | 25.0% |
!!! | AGGAGTGTTGTTTTTTTTAA+TGG | + | chr3_3:87274563-87274582 | Msa0481380:intron | 25.0% |
!!! | GTTGTTATTTGAGAAAAAGT+CGG | + | chr3_3:87274598-87274617 | Msa0481380:intron | 25.0% |
!!! | TTGTTATTTGAGAAAAAGTC+GGG | + | chr3_3:87274599-87274618 | Msa0481380:intron | 25.0% |
! | ATAAAATACTTAGCGAAAGA+GGG | + | chr3_3:87274728-87274747 | Msa0481380:intron | 25.0% |
!! | TAATTCTAGATCTCTTTTGA+TGG | - | chr3_3:87274774-87274793 | None:intergenic | 25.0% |
!! | TTTTGTCTAAATGGAATCTT+TGG | + | chr3_3:87274955-87274974 | Msa0481380:intron | 25.0% |
!! | TATAATTTGGTTGGTCAATA+CGG | + | chr3_3:87274996-87275015 | Msa0481380:intron | 25.0% |
! | ATATGTAATCATATGACAGA+AGG | - | chr3_3:87275023-87275042 | None:intergenic | 25.0% |
!! | ATGTGCATATGATAATTTTG+TGG | + | chr3_3:87275099-87275118 | Msa0481380:intron | 25.0% |
!!! | AATTTTTTTGGGGATCAATT+TGG | + | chr3_3:87275132-87275151 | Msa0481380:intron | 25.0% |
! | ATACATTACGAATATAAACG+AGG | - | chr3_3:87275193-87275212 | None:intergenic | 25.0% |
! | GGAAAAAACAAAAGATGATA+TGG | - | chr3_3:87275228-87275247 | None:intergenic | 25.0% |
!!! | GTTCAATGTTTGTTATGAAA+TGG | + | chr3_3:87275347-87275366 | Msa0481380:intron | 25.0% |
! | AGTATGCCAATAAATATAGT+AGG | + | chr3_3:87275404-87275423 | Msa0481380:intron | 25.0% |
!! | ATATTGTGCTTAAGCTTTAT+TGG | + | chr3_3:87275886-87275905 | Msa0481380:intron | 25.0% |
!! | CTAAAATCATTTTGCTTAGA+AGG | - | chr3_3:87275949-87275968 | None:intergenic | 25.0% |
!! | CTTCTAAGCAAAATGATTTT+AGG | + | chr3_3:87275947-87275966 | Msa0481380:intron | 25.0% |
!! | TCTAAGCAAAATGATTTTAG+GGG | + | chr3_3:87275949-87275968 | Msa0481380:intron | 25.0% |
! | TATATCTGTTTCCAGATATT+TGG | + | chr3_3:87276099-87276118 | Msa0481380:intron | 25.0% |
! | ATCATCAGGAATTAATGATT+GGG | - | chr3_3:87276199-87276218 | None:intergenic | 25.0% |
! | TATCATCAGGAATTAATGAT+TGG | - | chr3_3:87276200-87276219 | None:intergenic | 25.0% |
! | TGGAATGGATAAGATAATTT+AGG | + | chr3_3:87276438-87276457 | Msa0481380:intron | 25.0% |
! | AATGGATAAGATAATTTAGG+CGG | + | chr3_3:87276441-87276460 | Msa0481380:intron | 25.0% |
!!! | TGTCTTTCTTTGTTTGTTTT+AGG | + | chr3_3:87276625-87276644 | Msa0481380:intron | 25.0% |
! | TCTGAACCAAATAAGATATA+AGG | + | chr3_3:87276816-87276835 | Msa0481380:CDS | 25.0% |
! | CAAGTACCTTATATCTTATT+TGG | - | chr3_3:87276825-87276844 | None:intergenic | 25.0% |
!!! | TTCTCTTTACTTTTGTAGAT+TGG | + | chr3_3:87276954-87276973 | Msa0481380:intron | 25.0% |
! | ATAAAGTCTGTAAGTACAAT+GGG | + | chr3_3:87277068-87277087 | Msa0481380:intron | 25.0% |
!!! | TGTAAAAAGTGCTGATATTT+TGG | - | chr3_3:87277157-87277176 | None:intergenic | 25.0% |
!!! | GTTTAATTTGAAGAACTACT+CGG | + | chr3_3:87277226-87277245 | Msa0481380:intron | 25.0% |
! | GGCCTATAAATAAGTTTATA+AGG | - | chr3_3:87277481-87277500 | None:intergenic | 25.0% |
! | TGATACTATGTTGAAGTTAT+GGG | + | chr3_3:87277623-87277642 | Msa0481380:intron | 25.0% |
!! | TTTTCTCTCTTTATTCAACA+CGG | + | chr3_3:87277906-87277925 | Msa0481380:intron | 25.0% |
! | AAAAGACAACGTATTAAATG+AGG | - | chr3_3:87278277-87278296 | None:intergenic | 25.0% |
!!! | GTTGTCTTTTTCATATTACT+GGG | + | chr3_3:87278287-87278306 | Msa0481380:intron | 25.0% |
! | AAAACAATAAATGAGCTCAT+AGG | + | chr3_3:87278360-87278379 | Msa0481380:intron | 25.0% |
! | TTATCTCTAATAATTGAGAC+CGG | + | chr3_3:87278394-87278413 | Msa0481380:intron | 25.0% |
! | TAGACATATACTTTCAAAAG+AGG | + | chr3_3:87278503-87278522 | Msa0481380:intron | 25.0% |
! | AAGACAAACATATAGTCATT+TGG | + | chr3_3:87278878-87278897 | Msa0481380:intron | 25.0% |
!! | TTTTGTACTTTATCCTCTAA+AGG | + | chr3_3:87279011-87279030 | Msa0481380:intron | 25.0% |
! | TTTGTACTTTATCCTCTAAA+GGG | + | chr3_3:87279012-87279031 | Msa0481380:intron | 25.0% |
! | AGAAAAAAGCTGAAACAATA+AGG | - | chr3_3:87279122-87279141 | None:intergenic | 25.0% |
!!! | AAATCATTTTTGACAACTGA+TGG | + | chr3_3:87279149-87279168 | Msa0481380:intron | 25.0% |
!!! | CTTTTGAAAATGTGATTTCA+AGG | - | chr3_3:87279332-87279351 | None:intergenic | 25.0% |
!! | CATTTTCAAAAGCTAAAACA+AGG | + | chr3_3:87279340-87279359 | Msa0481380:intron | 25.0% |
! | ATTTGATATTTCATTTGGAG+AGG | + | chr3_3:87279570-87279589 | Msa0481380:CDS | 25.0% |
! | TTTGATATTTCATTTGGAGA+GGG | + | chr3_3:87279571-87279590 | Msa0481380:CDS | 25.0% |
!! | TGAATTTTCATTTTGAATGC+AGG | + | chr3_3:87279659-87279678 | Msa0481380:intron | 25.0% |
!! | GAATTTTCATTTTGAATGCA+GGG | + | chr3_3:87279660-87279679 | Msa0481380:intron | 25.0% |
! | GATGAATATTGTCTTAAAGA+AGG | + | chr3_3:87279707-87279726 | Msa0481380:intron | 25.0% |
!!! | TATGCAGTTTTATAATCTGT+CGG | + | chr3_3:87279912-87279931 | Msa0481380:intron | 25.0% |
! | TGATTACTGTAATTGATCAT+TGG | - | chr3_3:87279960-87279979 | None:intergenic | 25.0% |
! | CAATTACAGTAATCATTCAT+TGG | + | chr3_3:87279965-87279984 | Msa0481380:intron | 25.0% |
! | ATTATTGTAGTTGCATGATA+TGG | + | chr3_3:87280149-87280168 | Msa0481380:intron | 25.0% |
! | AATAAAAAAGAAACACGGAA+GGG | - | chr3_3:87280282-87280301 | None:intergenic | 25.0% |
!!! | GACATTTTTTACCTTTGTTT+CGG | + | chr3_3:87281174-87281193 | Msa0481380:intron | 25.0% |
! | CACATGAAAATTATACAACA+GGG | - | chr3_3:87281408-87281427 | None:intergenic | 25.0% |
! | CAAATTAGAATGAAAAACTG+AGG | - | chr3_3:87281484-87281503 | None:intergenic | 25.0% |
!! | CTCAGTTTTTCATTCTAATT+TGG | + | chr3_3:87281482-87281501 | Msa0481380:intron | 25.0% |
! | CTAAGAAGTTGTATAATCAT+AGG | - | chr3_3:87281772-87281791 | None:intergenic | 25.0% |
! | CTATGATTATACAACTTCTT+AGG | + | chr3_3:87281770-87281789 | Msa0481380:intron | 25.0% |
! | CAAAAATATCATACAAACTC+TGG | + | chr3_3:87281870-87281889 | Msa0481380:intron | 25.0% |
! | CTGGTAGTAACTTTATATTT+GGG | - | chr3_3:87282037-87282056 | None:intergenic | 25.0% |
!! | GTTTGTTCTTGATATGTTTT+TGG | + | chr3_3:87282173-87282192 | Msa0481380:intron | 25.0% |
!! | GAGTTATATTTTCTCTTGAA+AGG | + | chr3_3:87282209-87282228 | Msa0481380:intron | 25.0% |
! | CAGTACTCATCTAAAAATTA+AGG | - | chr3_3:87282575-87282594 | None:intergenic | 25.0% |
! | AAAGTAACGTTTATATAGGT+GGG | - | chr3_3:87282681-87282700 | None:intergenic | 25.0% |
! | AAAAGTAACGTTTATATAGG+TGG | - | chr3_3:87282682-87282701 | None:intergenic | 25.0% |
!!! | AGTAAGTTGATAAGATTGTT+AGG | - | chr3_3:87282978-87282997 | None:intergenic | 25.0% |
!! | TACTTGATTTCTTGTTTCTT+TGG | + | chr3_3:87283391-87283410 | Msa0481380:intron | 25.0% |
!! | ACTTGATTTCTTGTTTCTTT+GGG | + | chr3_3:87283392-87283411 | Msa0481380:intron | 25.0% |
!! | TTGTTTGGTTTCATAAAAAC+GGG | + | chr3_3:87283670-87283689 | Msa0481380:intron | 25.0% |
!!! | GTTGATTTTTCTGATAAGTT+TGG | + | chr3_3:87284011-87284030 | Msa0481380:three_prime_UTR | 25.0% |
! | TAAACATATATCAATGGAAC+AGG | - | chr3_3:87284134-87284153 | None:intergenic | 25.0% |
AATAGAAGAGAAGAAGAAGA+GGG | - | chr3_3:87273244-87273263 | None:intergenic | 30.0% | |
AAATAGAAGAGAAGAAGAAG+AGG | - | chr3_3:87273245-87273264 | None:intergenic | 30.0% | |
GCAGAAAAGTAAAAGAGAAA+AGG | - | chr3_3:87273407-87273426 | None:intergenic | 30.0% | |
! | GTTTCTTTTTCTCGAATTGA+TGG | + | chr3_3:87273540-87273559 | Msa0481380:intron | 30.0% |
TCTTTACGAGAAAGTGAATT+AGG | - | chr3_3:87273579-87273598 | None:intergenic | 30.0% | |
! | CTATCATTTTATCAGTTGCT+AGG | + | chr3_3:87273639-87273658 | Msa0481380:intron | 30.0% |
AACAGGGATCAATTGTTAAT+CGG | + | chr3_3:87273829-87273848 | Msa0481380:intron | 30.0% | |
!!! | TGCCCTTTTTTATAGTTGTA+AGG | + | chr3_3:87274420-87274439 | Msa0481380:intron | 30.0% |
CGATGAAGAGATAAAAAGAA+AGG | + | chr3_3:87274474-87274493 | Msa0481380:intron | 30.0% | |
GAAGAGATAAAAAGAAAGGA+AGG | + | chr3_3:87274478-87274497 | Msa0481380:intron | 30.0% | |
GATAAAATACTTAGCGAAAG+AGG | + | chr3_3:87274727-87274746 | Msa0481380:intron | 30.0% | |
TATGATTACATATTTCCACG+TGG | + | chr3_3:87275030-87275049 | Msa0481380:intron | 30.0% | |
TGAATTTCTATTCCAGCAAA+AGG | + | chr3_3:87275486-87275505 | Msa0481380:intron | 30.0% | |
ATAAACAACTCTTTCGGAAA+AGG | + | chr3_3:87275532-87275551 | Msa0481380:CDS | 30.0% | |
AATAGAAAACCTGTCATGTT+AGG | - | chr3_3:87275719-87275738 | None:intergenic | 30.0% | |
!! | GTATGTAACAGTAGTTTGTT+AGG | + | chr3_3:87275910-87275929 | Msa0481380:intron | 30.0% |
! | ATCATTTTGCTTAGAAGGTT+TGG | - | chr3_3:87275944-87275963 | None:intergenic | 30.0% |
!! | AAATGATTTTAGGGGATGTT+TGG | + | chr3_3:87275957-87275976 | Msa0481380:intron | 30.0% |
ATTAATGTATAGGGAGAGAT+TGG | + | chr3_3:87276700-87276719 | Msa0481380:intron | 30.0% | |
ACTTGTGATTAAGCAATAGA+TGG | - | chr3_3:87276881-87276900 | None:intergenic | 30.0% | |
AGAAACAAGAGATTTAACTG+TGG | - | chr3_3:87276917-87276936 | None:intergenic | 30.0% | |
!! | ATCTCTTGTTTCTGTTTACA+TGG | + | chr3_3:87276924-87276943 | Msa0481380:intron | 30.0% |
! | TTGTAGATTGGTGTCTATTA+TGG | + | chr3_3:87276966-87276985 | Msa0481380:intron | 30.0% |
AACAGATGCAAAAAACTTCA+AGG | - | chr3_3:87277021-87277040 | None:intergenic | 30.0% | |
GACTAGAAATTCGTTCTATA+GGG | + | chr3_3:87277042-87277061 | Msa0481380:CDS | 30.0% | |
GATAAAGTCTGTAAGTACAA+TGG | + | chr3_3:87277067-87277086 | Msa0481380:intron | 30.0% | |
AAGGAAAATTAGCAACAGAA+AGG | - | chr3_3:87277128-87277147 | None:intergenic | 30.0% | |
AAAAAACTTGTAGTAAGGCA+TGG | + | chr3_3:87277424-87277443 | Msa0481380:intron | 30.0% | |
AACTTCAACATAGTATCAGA+GGG | - | chr3_3:87277621-87277640 | None:intergenic | 30.0% | |
TAACTTCAACATAGTATCAG+AGG | - | chr3_3:87277622-87277641 | None:intergenic | 30.0% | |
CTGATACTATGTTGAAGTTA+TGG | + | chr3_3:87277622-87277641 | Msa0481380:intron | 30.0% | |
CTCCTATATAATAAACCTTC+CGG | + | chr3_3:87277844-87277863 | Msa0481380:intron | 30.0% | |
TAACACTAACCCCTATTTAT+AGG | + | chr3_3:87278049-87278068 | Msa0481380:intron | 30.0% | |
! | GGGAGTATATTATAGTATCT+TGG | - | chr3_3:87278160-87278179 | None:intergenic | 30.0% |
TCTTATAAATAATACCGGAG+GGG | - | chr3_3:87278180-87278199 | None:intergenic | 30.0% | |
CTCTTATAAATAATACCGGA+GGG | - | chr3_3:87278181-87278200 | None:intergenic | 30.0% | |
TCTCTTATAAATAATACCGG+AGG | - | chr3_3:87278182-87278201 | None:intergenic | 30.0% | |
!! | CGTTGTCTTTTTCATATTAC+TGG | + | chr3_3:87278286-87278305 | Msa0481380:intron | 30.0% |
! | ATGTCTCACAATTTTCCATA+AGG | + | chr3_3:87278318-87278337 | Msa0481380:intron | 30.0% |
! | TGTCTCACAATTTTCCATAA+GGG | + | chr3_3:87278319-87278338 | Msa0481380:intron | 30.0% |
! | GTTTTACACATATACCCTTA+TGG | - | chr3_3:87278336-87278355 | None:intergenic | 30.0% |
!! | CCTTTAAGTTTTTGCTTGAA+AGG | - | chr3_3:87278470-87278489 | None:intergenic | 30.0% |
CCTTTCAAGCAAAAACTTAA+AGG | + | chr3_3:87278467-87278486 | Msa0481380:intron | 30.0% | |
GTTGATTGATTGTTTGTTCT+AGG | - | chr3_3:87278553-87278572 | None:intergenic | 30.0% | |
!! | AGCCCAATATCATTTTTGTT+TGG | - | chr3_3:87278619-87278638 | None:intergenic | 30.0% |
!!! | ACTTTTAAGTTGGTTACTTC+AGG | - | chr3_3:87278656-87278675 | None:intergenic | 30.0% |
TGAAGTAACCAACTTAAAAG+TGG | + | chr3_3:87278655-87278674 | Msa0481380:intron | 30.0% | |
!!! | GTCACACTTTTTTTTTTGTG+TGG | + | chr3_3:87278683-87278702 | Msa0481380:intron | 30.0% |
!!! | CTCTCTTATTTTGGTTGTTT+CGG | - | chr3_3:87278755-87278774 | None:intergenic | 30.0% |
AAACAACCAAAATAAGAGAG+AGG | + | chr3_3:87278755-87278774 | Msa0481380:intron | 30.0% | |
!! | AAATTGACTCCTCTAAAATG+AGG | - | chr3_3:87279043-87279062 | None:intergenic | 30.0% |
AAACAATCTAGTACAATTCG+AGG | - | chr3_3:87279068-87279087 | None:intergenic | 30.0% | |
!!! | GGCATAAGCTATTTTTTGTT+TGG | - | chr3_3:87279269-87279288 | None:intergenic | 30.0% |
!! | CTAACTTGAGAAGTTGTTTT+AGG | + | chr3_3:87279522-87279541 | Msa0481380:intron | 30.0% |
GCCGAATTTGATATTTCATT+TGG | + | chr3_3:87279565-87279584 | Msa0481380:CDS | 30.0% | |
GAGCTACTGTAAAATTGATT+TGG | + | chr3_3:87279876-87279895 | Msa0481380:intron | 30.0% | |
!! | GTAATCATTCATTGGTTCAT+AGG | + | chr3_3:87279973-87279992 | Msa0481380:intron | 30.0% |
CTAATTTGATCTCTGCTATA+TGG | - | chr3_3:87280089-87280108 | None:intergenic | 30.0% | |
TAGCAGAGATCAAATTAGAT+AGG | + | chr3_3:87280091-87280110 | Msa0481380:intron | 30.0% | |
TTGAAATGTAAACAGTGTCT+AGG | - | chr3_3:87280194-87280213 | None:intergenic | 30.0% | |
GAATAAAAAAGAAACACGGA+AGG | - | chr3_3:87280283-87280302 | None:intergenic | 30.0% | |
! | TCTTCTAGAAGAAGTTGAAA+AGG | + | chr3_3:87280512-87280531 | Msa0481380:intron | 30.0% |
! | CACTAACCTCTTATTTATAG+AGG | + | chr3_3:87280588-87280607 | Msa0481380:intron | 30.0% |
CTTGTACCTCTATAAATAAG+AGG | - | chr3_3:87280597-87280616 | None:intergenic | 30.0% | |
GTATTATGGAACTAAATCCT+AGG | + | chr3_3:87280671-87280690 | Msa0481380:intron | 30.0% | |
!! | TGTTCTAGAAATTATCTCCT+AGG | - | chr3_3:87280691-87280710 | None:intergenic | 30.0% |
! | TATCTTAATGACAGAGTATC+TGG | + | chr3_3:87280766-87280785 | Msa0481380:intron | 30.0% |
! | ATCTTAATGACAGAGTATCT+GGG | + | chr3_3:87280767-87280786 | Msa0481380:intron | 30.0% |
CCTAAATAAATAGATGAAGC+AGG | - | chr3_3:87280843-87280862 | None:intergenic | 30.0% | |
CCTGCTTCATCTATTTATTT+AGG | + | chr3_3:87280840-87280859 | Msa0481380:intron | 30.0% | |
AAAAATCCACAACTTCAACA+TGG | + | chr3_3:87280995-87281014 | Msa0481380:intron | 30.0% | |
AAAATCCACAACTTCAACAT+GGG | + | chr3_3:87280996-87281015 | Msa0481380:intron | 30.0% | |
CATCAACATAAACACTAAGA+GGG | - | chr3_3:87281137-87281156 | None:intergenic | 30.0% | |
ACATCAACATAAACACTAAG+AGG | - | chr3_3:87281138-87281157 | None:intergenic | 30.0% | |
!!! | ATTTTTTACCTTTGTTTCGG+TGG | + | chr3_3:87281177-87281196 | Msa0481380:intron | 30.0% |
CCAACACATATACAACTATT+GGG | - | chr3_3:87281315-87281334 | None:intergenic | 30.0% | |
CCAATAGTTGTATATGTGTT+GGG | + | chr3_3:87281313-87281332 | Msa0481380:intron | 30.0% | |
CCACATGAAAATTATACAAC+AGG | - | chr3_3:87281409-87281428 | None:intergenic | 30.0% | |
! | CCTGTTGTATAATTTTCATG+TGG | + | chr3_3:87281406-87281425 | Msa0481380:intron | 30.0% |
TAGAATGAAAAACTGAGGTT+TGG | - | chr3_3:87281479-87281498 | None:intergenic | 30.0% | |
CCTGGTAGTAACTTTATATT+TGG | - | chr3_3:87282038-87282057 | None:intergenic | 30.0% | |
CCAAATATAAAGTTACTACC+AGG | + | chr3_3:87282035-87282054 | Msa0481380:intron | 30.0% | |
! | TTTTGTTGGCAATTTCAGTT+TGG | + | chr3_3:87282097-87282116 | Msa0481380:intron | 30.0% |
CTATTCATGAAAGTCAAAAC+TGG | + | chr3_3:87282128-87282147 | Msa0481380:intron | 30.0% | |
! | TCAAAACTGGTTTCTTTAGT+TGG | + | chr3_3:87282141-87282160 | Msa0481380:intron | 30.0% |
! | GTGTATTTAAGACAGTATCT+TGG | + | chr3_3:87282278-87282297 | Msa0481380:intron | 30.0% |
TTTATGGAAGTAGACAATCT+AGG | - | chr3_3:87282330-87282349 | None:intergenic | 30.0% | |
TAAAAGTCTATGCCTTAACT+TGG | + | chr3_3:87282487-87282506 | Msa0481380:intron | 30.0% | |
ATGAATAAGAGACCAAGTTA+AGG | - | chr3_3:87282502-87282521 | None:intergenic | 30.0% | |
! | AAGCCAAATTCTGAAAGATT+TGG | - | chr3_3:87282640-87282659 | None:intergenic | 30.0% |
AAGTAACGTTTATATAGGTG+GGG | - | chr3_3:87282680-87282699 | None:intergenic | 30.0% | |
! | AATTTGTTTGTCAAGACTCA+AGG | - | chr3_3:87282713-87282732 | None:intergenic | 30.0% |
! | ATTGTTAGGAACTTTTCTCT+TGG | + | chr3_3:87282741-87282760 | Msa0481380:intron | 30.0% |
! | ATCTTTCTCTTTTACTCTTG+AGG | + | chr3_3:87282901-87282920 | Msa0481380:intron | 30.0% |
! | TCTTTCTCTTTTACTCTTGA+GGG | + | chr3_3:87282902-87282921 | Msa0481380:intron | 30.0% |
! | GTTGTTAAAAGCTGTTACTT+TGG | - | chr3_3:87282953-87282972 | None:intergenic | 30.0% |
!! | AAGTTGATAAGATTGTTAGG+TGG | - | chr3_3:87282975-87282994 | None:intergenic | 30.0% |
! | TGATAGGTTTCAGTTTTACT+TGG | + | chr3_3:87283145-87283164 | Msa0481380:intron | 30.0% |
! | ACCCTGATATTATGTTACTT+TGG | + | chr3_3:87283295-87283314 | Msa0481380:intron | 30.0% |
GCCAAAGTAACATAATATCA+GGG | - | chr3_3:87283299-87283318 | None:intergenic | 30.0% | |
AGCCAAAGTAACATAATATC+AGG | - | chr3_3:87283300-87283319 | None:intergenic | 30.0% | |
ATTCAAACAGGAATCAAGTT+TGG | - | chr3_3:87283419-87283438 | None:intergenic | 30.0% | |
ATTCCTGTTTGAATAACTCA+AGG | + | chr3_3:87283425-87283444 | Msa0481380:intron | 30.0% | |
GAACATACCTGACAAATAAT+CGG | + | chr3_3:87283451-87283470 | Msa0481380:intron | 30.0% | |
! | AAGTATACCGATTATTTGTC+AGG | - | chr3_3:87283461-87283480 | None:intergenic | 30.0% |
!! | GTTGATAATGTTTCCTTTCT+AGG | + | chr3_3:87283589-87283608 | Msa0481380:intron | 30.0% |
TTGATATCATTTGCTTTCCA+GGG | + | chr3_3:87283641-87283660 | Msa0481380:intron | 30.0% | |
AAATTGATATGCAGGTAGTT+CGG | + | chr3_3:87283882-87283901 | Msa0481380:intron | 30.0% | |
AGATTGCAGGTTTATAGAAT+TGG | + | chr3_3:87284039-87284058 | Msa0481380:three_prime_UTR | 30.0% | |
TTCTTCAACATAAATGGAAC+TGG | + | chr3_3:87284071-87284090 | Msa0481380:three_prime_UTR | 30.0% | |
GATTGTGTTGTGAAAGAAAC+AGG | - | chr3_3:87273076-87273095 | None:intergenic | 35.0% | |
! | TGGTTTCAGAATGAAAGTGT+GGG | - | chr3_3:87273221-87273240 | None:intergenic | 35.0% |
AAAGAGTGGAACTTCTTGAT+AGG | - | chr3_3:87273271-87273290 | None:intergenic | 35.0% | |
GACATGTTTAGAAGAAGAAG+AGG | - | chr3_3:87273311-87273330 | None:intergenic | 35.0% | |
AAGATTCAATGCGAACTCAA+CGG | + | chr3_3:87273331-87273350 | Msa0481380:CDS | 35.0% | |
!! | CAGTTTTACTAGTTTGGATG+TGG | + | chr3_3:87273501-87273520 | Msa0481380:intron | 35.0% |
!! | CTTTTTCTCGAATTGATGGT+AGG | + | chr3_3:87273544-87273563 | Msa0481380:intron | 35.0% |
TACAGAACGAAGAAACTAAC+AGG | + | chr3_3:87273812-87273831 | Msa0481380:intron | 35.0% | |
ACAGAACGAAGAAACTAACA+GGG | + | chr3_3:87273813-87273832 | Msa0481380:intron | 35.0% | |
! | TTGTTCACATTTTACCCAAC+AGG | + | chr3_3:87273864-87273883 | Msa0481380:intron | 35.0% |
CAATGATATGTTTGCAAGAG+CGG | - | chr3_3:87273898-87273917 | None:intergenic | 35.0% | |
ATCTATGAAATGCATGCACT+CGG | - | chr3_3:87274014-87274033 | None:intergenic | 35.0% | |
!! | CACACTACTTTTGTCTATGT+AGG | + | chr3_3:87274086-87274105 | Msa0481380:intron | 35.0% |
ACCATAGGATCAAATCAGAA+CGG | + | chr3_3:87274259-87274278 | Msa0481380:intron | 35.0% | |
AGAAAGGAAGGTTAATGTTG+TGG | + | chr3_3:87274490-87274509 | Msa0481380:intron | 35.0% | |
TATGCCCAATCATCTTAGAA+GGG | + | chr3_3:87274677-87274696 | Msa0481380:intron | 35.0% | |
TCGACTTTACCAAGTAGAAA+AGG | + | chr3_3:87274855-87274874 | Msa0481380:intron | 35.0% | |
CGACTTTACCAAGTAGAAAA+GGG | + | chr3_3:87274856-87274875 | Msa0481380:intron | 35.0% | |
ACAATGCACTAGAAGATTGA+TGG | + | chr3_3:87275062-87275081 | Msa0481380:intron | 35.0% | |
AAAAGGTAGTGTTACGAGAT+TGG | + | chr3_3:87275549-87275568 | Msa0481380:CDS | 35.0% | |
AAAGGTAGTGTTACGAGATT+GGG | + | chr3_3:87275550-87275569 | Msa0481380:CDS | 35.0% | |
! | ATGACAGGTTTTCTATTGTC+TGG | + | chr3_3:87275722-87275741 | Msa0481380:intron | 35.0% |
!! | TTGGCTTTAGACTTTGCTTT+AGG | + | chr3_3:87275777-87275796 | Msa0481380:CDS | 35.0% |
TCCAAAAGGAAGAATTGTAG+AGG | + | chr3_3:87275809-87275828 | Msa0481380:CDS | 35.0% | |
! | ACCTCTACAATTCTTCCTTT+TGG | - | chr3_3:87275813-87275832 | None:intergenic | 35.0% |
ATGCTTCATGTTACATTCTC+TGG | + | chr3_3:87275842-87275861 | Msa0481380:intron | 35.0% | |
TGCTTCATGTTACATTCTCT+GGG | + | chr3_3:87275843-87275862 | Msa0481380:intron | 35.0% | |
CAGTGAGTTTGACAAAATCA+CGG | + | chr3_3:87275985-87276004 | Msa0481380:intron | 35.0% | |
! | TGATCCAGCATATTCTAAAG+CGG | + | chr3_3:87276326-87276345 | Msa0481380:CDS | 35.0% |
CGACTAGAAATTCGTTCTAT+AGG | + | chr3_3:87277041-87277060 | Msa0481380:CDS | 35.0% | |
!!! | GCTGATATTTTGGAGTAGAA+AGG | - | chr3_3:87277147-87277166 | None:intergenic | 35.0% |
!!! | CGGCATTTTGATTTCTGTTT+AGG | + | chr3_3:87277246-87277265 | Msa0481380:intron | 35.0% |
TTGATTTCTGTTTAGGCCAA+AGG | + | chr3_3:87277253-87277272 | Msa0481380:intron | 35.0% | |
!!! | AATGTTGTAACGGCTAGTTT+TGG | - | chr3_3:87277508-87277527 | None:intergenic | 35.0% |
!! | ATTATTTTGTTGCCGAGTTC+TGG | - | chr3_3:87277569-87277588 | None:intergenic | 35.0% |
AATAATGATACCACATGTCG+CGG | + | chr3_3:87277583-87277602 | Msa0481380:intron | 35.0% | |
GCTTACTCTCTAAGTTACTT+AGG | + | chr3_3:87277757-87277776 | Msa0481380:intron | 35.0% | |
CACCGGAAGGTTTATTATAT+AGG | - | chr3_3:87277849-87277868 | None:intergenic | 35.0% | |
TACTATAATATACTCCCCTC+CGG | + | chr3_3:87278163-87278182 | Msa0481380:intron | 35.0% | |
AGAGGTAGTCATAACCAATA+AGG | + | chr3_3:87278521-87278540 | Msa0481380:intron | 35.0% | |
! | GTTCTAGGCATAAACCTTAT+TGG | - | chr3_3:87278538-87278557 | None:intergenic | 35.0% |
TCAGCAATGATTTCTTCAGT+TGG | - | chr3_3:87278575-87278594 | None:intergenic | 35.0% | |
AACCAACTTAAAAGTGGTAG+AGG | + | chr3_3:87278661-87278680 | Msa0481380:intron | 35.0% | |
!!! | TTTTTTTGTGTGGTTGCTGT+CGG | + | chr3_3:87278693-87278712 | Msa0481380:intron | 35.0% |
!!! | TGTCGAGATTTTGACTATCT+CGG | + | chr3_3:87278924-87278943 | Msa0481380:intron | 35.0% |
TTGAGAATGTGATCAAATGC+AGG | - | chr3_3:87278965-87278984 | None:intergenic | 35.0% | |
GATTTCAAGGTTGCGTAAAA+GGG | - | chr3_3:87279319-87279338 | None:intergenic | 35.0% | |
TGATTTCAAGGTTGCGTAAA+AGG | - | chr3_3:87279320-87279339 | None:intergenic | 35.0% | |
CAGAACATTCTAGACTAGAA+CGG | - | chr3_3:87279403-87279422 | None:intergenic | 35.0% | |
! | TCAAATTCGGCTACTTTGTA+AGG | - | chr3_3:87279556-87279575 | None:intergenic | 35.0% |
! | TCTTTTACATCCTCCAACAT+TGG | + | chr3_3:87279830-87279849 | Msa0481380:intron | 35.0% |
! | CTTTTACATCCTCCAACATT+GGG | + | chr3_3:87279831-87279850 | Msa0481380:intron | 35.0% |
TTGTAGTTGCATGATATGGT+TGG | + | chr3_3:87280153-87280172 | Msa0481380:intron | 35.0% | |
TGTCTAGGTTCATTGCATAT+AGG | - | chr3_3:87280179-87280198 | None:intergenic | 35.0% | |
AGAGTGAGAAAAGATGACAA+CGG | - | chr3_3:87280316-87280335 | None:intergenic | 35.0% | |
TTGAGACACAAACAATGGAA+AGG | - | chr3_3:87280369-87280388 | None:intergenic | 35.0% | |
TTCCATTGTTTGTGTCTCAA+TGG | + | chr3_3:87280369-87280388 | Msa0481380:intron | 35.0% | |
ATTGTTTGTGTCTCAATGGT+GGG | + | chr3_3:87280373-87280392 | Msa0481380:intron | 35.0% | |
GGATGATCAACATTAAGACA+TGG | - | chr3_3:87280423-87280442 | None:intergenic | 35.0% | |
ATCCAAATCTGTCTTGAAAC+AGG | + | chr3_3:87280439-87280458 | Msa0481380:intron | 35.0% | |
AACCTGTTTCAAGACAGATT+TGG | - | chr3_3:87280444-87280463 | None:intergenic | 35.0% | |
AATCTGTCTTGAAACAGGTT+AGG | + | chr3_3:87280444-87280463 | Msa0481380:intron | 35.0% | |
CAAAACATTGCAGTACTTGA+AGG | + | chr3_3:87280479-87280498 | Msa0481380:intron | 35.0% | |
! | CAACTTCTTCTAGAAGATGT+GGG | - | chr3_3:87280509-87280528 | None:intergenic | 35.0% |
! | TCAACTTCTTCTAGAAGATG+TGG | - | chr3_3:87280510-87280529 | None:intergenic | 35.0% |
CTAGAAGAAGTTGAAAAGGT+TGG | + | chr3_3:87280516-87280535 | Msa0481380:intron | 35.0% | |
CTTCCAAACATTCAAGAACT+AGG | - | chr3_3:87281069-87281088 | None:intergenic | 35.0% | |
GTTCTTGAATGTTTGGAAGT+TGG | + | chr3_3:87281070-87281089 | Msa0481380:intron | 35.0% | |
! | AATTGATGAGTAGAAGCACA+TGG | - | chr3_3:87281244-87281263 | None:intergenic | 35.0% |
ATGTGCTTCTACTCATCAAT+TGG | + | chr3_3:87281243-87281262 | Msa0481380:intron | 35.0% | |
CCCAATAGTTGTATATGTGT+TGG | + | chr3_3:87281312-87281331 | Msa0481380:intron | 35.0% | |
CCCAACACATATACAACTAT+TGG | - | chr3_3:87281316-87281335 | None:intergenic | 35.0% | |
ATAGTTGTATATGTGTTGGG+TGG | + | chr3_3:87281316-87281335 | Msa0481380:intron | 35.0% | |
AACCAAAGTAAAGCCATTGT+TGG | - | chr3_3:87281369-87281388 | None:intergenic | 35.0% | |
TGAGGTTTGGAAACAATTGT+GGG | - | chr3_3:87281466-87281485 | None:intergenic | 35.0% | |
AACGATACTAAAACAGAAGG+TGG | - | chr3_3:87281541-87281560 | None:intergenic | 35.0% | |
CCTAACGATACTAAAACAGA+AGG | - | chr3_3:87281544-87281563 | None:intergenic | 35.0% | |
!!! | CCTTCTGTTTTAGTATCGTT+AGG | + | chr3_3:87281541-87281560 | Msa0481380:intron | 35.0% |
ATTTGTGTCACCATCAAATG+AGG | + | chr3_3:87281613-87281632 | Msa0481380:intron | 35.0% | |
TTTGTGTCACCATCAAATGA+GGG | + | chr3_3:87281614-87281633 | Msa0481380:intron | 35.0% | |
AAACTCAAACCCTCATTTGA+TGG | - | chr3_3:87281626-87281645 | None:intergenic | 35.0% | |
TACAAATTTCCAAGTCCATC+TGG | + | chr3_3:87281945-87281964 | Msa0481380:intron | 35.0% | |
! | TTATTGAGGACTTTTCCAGA+TGG | - | chr3_3:87281963-87281982 | None:intergenic | 35.0% |
!! | CGTGTTGTTGTTTCATCTTT+GGG | - | chr3_3:87282006-87282025 | None:intergenic | 35.0% |
!! | TCGTGTTGTTGTTTCATCTT+TGG | - | chr3_3:87282007-87282026 | None:intergenic | 35.0% |
TATAAAGTTACTACCAGGTC+AGG | + | chr3_3:87282040-87282059 | Msa0481380:intron | 35.0% | |
ATAAAGTTACTACCAGGTCA+GGG | + | chr3_3:87282041-87282060 | Msa0481380:intron | 35.0% | |
TGGTTTCTTTAGTTGGAGTT+TGG | + | chr3_3:87282148-87282167 | Msa0481380:intron | 35.0% | |
TTTCTTTAGTTGGAGTTTGG+TGG | + | chr3_3:87282151-87282170 | Msa0481380:intron | 35.0% | |
TGTATGTTGTAGATGAACAC+AGG | + | chr3_3:87282529-87282548 | Msa0481380:intron | 35.0% | |
! | CTTTCAGAATTTGGCTTCAA+TGG | + | chr3_3:87282643-87282662 | Msa0481380:intron | 35.0% |
TAAGAGAGAATTCTCAAACC+TGG | + | chr3_3:87282766-87282785 | Msa0481380:intron | 35.0% | |
AAGAGAGAATTCTCAAACCT+GGG | + | chr3_3:87282767-87282786 | Msa0481380:intron | 35.0% | |
TAGTTTATTCAAATCTGCCC+AGG | - | chr3_3:87282787-87282806 | None:intergenic | 35.0% | |
GGGCAGATTTGAATAAACTA+AGG | + | chr3_3:87282787-87282806 | Msa0481380:intron | 35.0% | |
TTGCATGCTTGAATGATGAT+AGG | + | chr3_3:87283129-87283148 | Msa0481380:intron | 35.0% | |
GCTAAGCAATTTCACCAAAA+AGG | - | chr3_3:87283222-87283241 | None:intergenic | 35.0% | |
TGGTGAAATTGCTTAGCATA+AGG | + | chr3_3:87283225-87283244 | Msa0481380:intron | 35.0% | |
!! | ACTTTGAGTTTGCTGATTCT+TGG | + | chr3_3:87283360-87283379 | Msa0481380:intron | 35.0% |
AGTCCTTGAGTTATTCAAAC+AGG | - | chr3_3:87283431-87283450 | None:intergenic | 35.0% | |
ATACTCATAGTCATGGAAGT+TGG | - | chr3_3:87283489-87283508 | None:intergenic | 35.0% | |
TTTGAGCATACTCATAGTCA+TGG | - | chr3_3:87283496-87283515 | None:intergenic | 35.0% | |
GATGAATCACAATGAACTCA+CGG | + | chr3_3:87283548-87283567 | Msa0481380:intron | 35.0% | |
ATGAATCACAATGAACTCAC+GGG | + | chr3_3:87283549-87283568 | Msa0481380:intron | 35.0% | |
GTTGATATCATTTGCTTTCC+AGG | + | chr3_3:87283640-87283659 | Msa0481380:intron | 35.0% | |
!!! | TTTCCAGGGTTTTGTTTGTT+TGG | + | chr3_3:87283655-87283674 | Msa0481380:intron | 35.0% |
AAACCAAACAAACAAAACCC+TGG | - | chr3_3:87283661-87283680 | None:intergenic | 35.0% | |
GCTATCTAAGTTCTTAGTCT+AGG | + | chr3_3:87283692-87283711 | Msa0481380:intron | 35.0% | |
GAATGTGTCTCGAAAGTTTA+TGG | + | chr3_3:87283757-87283776 | Msa0481380:intron | 35.0% | |
! | TCGTATGTGAAAAGCTTGTT+TGG | - | chr3_3:87283931-87283950 | None:intergenic | 35.0% |
TTCACATACGAAGAATAGTC+CGG | + | chr3_3:87283940-87283959 | Msa0481380:CDS | 35.0% | |
TTTGAAGAAAGTCTGTGATG+AGG | + | chr3_3:87283986-87284005 | Msa0481380:exon | 35.0% | |
TTCAACATAAATGGAACTGG+AGG | + | chr3_3:87284074-87284093 | Msa0481380:three_prime_UTR | 35.0% | |
!! | TGGAGGTAGCTTTAATGATT+AGG | + | chr3_3:87284091-87284110 | Msa0481380:three_prime_UTR | 35.0% |
CTTTGACTCAACCAGTTTAA+TGG | + | chr3_3:87284220-87284239 | Msa0481380:three_prime_UTR | 35.0% | |
AACCAGTTTAATGGTAGAAC+CGG | + | chr3_3:87284229-87284248 | Msa0481380:three_prime_UTR | 35.0% | |
AGTTTAATCACCAGTTCAAC+CGG | - | chr3_3:87284263-87284282 | None:intergenic | 35.0% | |
ATTAAACTGATGCCTTTGGT+TGG | + | chr3_3:87284275-87284294 | Msa0481380:three_prime_UTR | 35.0% | |
TTAAACTGATGCCTTTGGTT+GGG | + | chr3_3:87284276-87284295 | Msa0481380:three_prime_UTR | 35.0% | |
!! | AGAATGAAAGTGTGGGGTTT+TGG | - | chr3_3:87273214-87273233 | None:intergenic | 40.0% |
! | GGTTTCAGAATGAAAGTGTG+GGG | - | chr3_3:87273220-87273239 | None:intergenic | 40.0% |
GTGGTTTCAGAATGAAAGTG+TGG | - | chr3_3:87273222-87273241 | None:intergenic | 40.0% | |
! | ACTAGTTTGGATGTGGATTG+TGG | + | chr3_3:87273508-87273527 | Msa0481380:intron | 40.0% |
! | TTTCTCGAATTGATGGTAGG+AGG | + | chr3_3:87273547-87273566 | Msa0481380:intron | 40.0% |
! | TCACATTTTACCCAACAGGA+AGG | + | chr3_3:87273868-87273887 | Msa0481380:intron | 40.0% |
GAGTCCACATACAACATGAT+GGG | + | chr3_3:87274217-87274236 | Msa0481380:intron | 40.0% | |
TCATCCCATCATGTTGTATG+TGG | - | chr3_3:87274224-87274243 | None:intergenic | 40.0% | |
! | TCCGTTCTGATTTGATCCTA+TGG | - | chr3_3:87274263-87274282 | None:intergenic | 40.0% |
AACTATAAAAAAGGGCAGCC+CGG | - | chr3_3:87274417-87274436 | None:intergenic | 40.0% | |
ATACTGCTATACTGGATGAG+TGG | + | chr3_3:87274518-87274537 | Msa0481380:intron | 40.0% | |
! | AAATGGTAGAGTTTTGCCGT+AGG | + | chr3_3:87274641-87274660 | Msa0481380:intron | 40.0% |
ATACATGCTCAAACCACCTA+CGG | - | chr3_3:87274660-87274679 | None:intergenic | 40.0% | |
GTATGCCCAATCATCTTAGA+AGG | + | chr3_3:87274676-87274695 | Msa0481380:intron | 40.0% | |
TCATCCATGGCAGAAAATGT+TGG | + | chr3_3:87274813-87274832 | Msa0481380:intron | 40.0% | |
! | GAAACCAACATTTTCTGCCA+TGG | - | chr3_3:87274820-87274839 | None:intergenic | 40.0% |
TACCAAGTAGAAAAGGGCTT+TGG | + | chr3_3:87274862-87274881 | Msa0481380:intron | 40.0% | |
! | TACCAAAGCCCTTTTCTACT+TGG | - | chr3_3:87274867-87274886 | None:intergenic | 40.0% |
!!! | CATTGTGTCTTTTTTCCACG+TGG | - | chr3_3:87275048-87275067 | None:intergenic | 40.0% |
CGTGAACACTATTATGCAGA+GGG | - | chr3_3:87275249-87275268 | None:intergenic | 40.0% | |
CCTCTGCATAATAGTGTTCA+CGG | + | chr3_3:87275247-87275266 | Msa0481380:intron | 40.0% | |
! | AACTTTTCCCAGTGGATGTT+TGG | + | chr3_3:87275758-87275777 | Msa0481380:CDS | 40.0% |
! | TCTAAAGCCAAACATCCACT+GGG | - | chr3_3:87275768-87275787 | None:intergenic | 40.0% |
! | GCTTTAGACTTTGCTTTAGG+TGG | + | chr3_3:87275780-87275799 | Msa0481380:CDS | 40.0% |
! | TTAGACTTTGCTTTAGGTGG+TGG | + | chr3_3:87275783-87275802 | Msa0481380:CDS | 40.0% |
TGAGTTTGACAAAATCACGG+TGG | + | chr3_3:87275988-87276007 | Msa0481380:intron | 40.0% | |
! | TGCTTTCTGGTCCAAATATC+TGG | - | chr3_3:87276113-87276132 | None:intergenic | 40.0% |
ATATTTGGACCAGAAAGCAG+TGG | + | chr3_3:87276114-87276133 | Msa0481380:CDS | 40.0% | |
TATTTGGACCAGAAAGCAGT+GGG | + | chr3_3:87276115-87276134 | Msa0481380:CDS | 40.0% | |
! | TGCAATAGCATGAAGTGCTA+GGG | - | chr3_3:87276148-87276167 | None:intergenic | 40.0% |
! | TCATGCTATTGCAGAAGTAC+AGG | + | chr3_3:87276155-87276174 | Msa0481380:CDS | 40.0% |
! | AGAAGTACAGGTAATTCGTC+TGG | + | chr3_3:87276167-87276186 | Msa0481380:intron | 40.0% |
GTTTATGTCATGCAGAAGCT+AGG | + | chr3_3:87276267-87276286 | Msa0481380:intron | 40.0% | |
!! | ATATTCTAAAGCGGTAGGAG+TGG | + | chr3_3:87276335-87276354 | Msa0481380:CDS | 40.0% |
AGAGTAATACCTTTGACCTG+TGG | + | chr3_3:87276409-87276428 | Msa0481380:intron | 40.0% | |
GTGCCCATATTGCATTATCA+GGG | + | chr3_3:87276463-87276482 | Msa0481380:intron | 40.0% | |
! | GCACCCTGATAATGCAATAT+GGG | - | chr3_3:87276469-87276488 | None:intergenic | 40.0% |
! | AGCACCCTGATAATGCAATA+TGG | - | chr3_3:87276470-87276489 | None:intergenic | 40.0% |
TGTTCACTTCAACTTCTGCT+CGG | - | chr3_3:87276603-87276622 | None:intergenic | 40.0% | |
AGAGATTGGAATGCAGCAAA+TGG | + | chr3_3:87276714-87276733 | Msa0481380:CDS | 40.0% | |
GAGATTGGAATGCAGCAAAT+GGG | + | chr3_3:87276715-87276734 | Msa0481380:CDS | 40.0% | |
! | AAGAGTACAACCAGCTTTAG+AGG | - | chr3_3:87276791-87276810 | None:intergenic | 40.0% |
GCACTCTTACACGAACTTTA+AGG | - | chr3_3:87277294-87277313 | None:intergenic | 40.0% | |
! | TGTAAGAGTGCAAAAGAGCA+AGG | + | chr3_3:87277303-87277322 | Msa0481380:CDS | 40.0% |
TTGTAGTAAGGCATGGACAT+GGG | + | chr3_3:87277431-87277450 | Msa0481380:intron | 40.0% | |
!!! | GTAACGGCTAGTTTTGGTTT+AGG | - | chr3_3:87277502-87277521 | None:intergenic | 40.0% |
! | CCGTGGACTAAATGTTGTAA+CGG | - | chr3_3:87277518-87277537 | None:intergenic | 40.0% |
CCGTTACAACATTTAGTCCA+CGG | + | chr3_3:87277515-87277534 | Msa0481380:intron | 40.0% | |
TTCAACATAGTATCAGAGGG+TGG | - | chr3_3:87277618-87277637 | None:intergenic | 40.0% | |
AGTAGCTTAGAGACTAAGCT+AGG | - | chr3_3:87277821-87277840 | None:intergenic | 40.0% | |
TCTCTAATAATTGAGACCGG+AGG | + | chr3_3:87278397-87278416 | Msa0481380:intron | 40.0% | |
CTCTAATAATTGAGACCGGA+GGG | + | chr3_3:87278398-87278417 | Msa0481380:intron | 40.0% | |
GTCTTAGATATTACTCCCTC+CGG | - | chr3_3:87278416-87278435 | None:intergenic | 40.0% | |
!! | GACCTCTACCACTTTTAAGT+TGG | - | chr3_3:87278666-87278685 | None:intergenic | 40.0% |
!! | GGATGACCTCTCTCTTATTT+TGG | - | chr3_3:87278764-87278783 | None:intergenic | 40.0% |
!! | ACCAATTCCAAGTTGGTCAT+CGG | - | chr3_3:87278855-87278874 | None:intergenic | 40.0% |
TCTTGCTACCAATTCCAAGT+TGG | - | chr3_3:87278862-87278881 | None:intergenic | 40.0% | |
GTCAATAAGCTGGTAAGTGT+TGG | + | chr3_3:87279595-87279614 | Msa0481380:intron | 40.0% | |
TTGTCTTAAAGAAGGGCTCT+TGG | + | chr3_3:87279715-87279734 | Msa0481380:intron | 40.0% | |
! | GAGTTTTCAGACAATACCGA+TGG | - | chr3_3:87279755-87279774 | None:intergenic | 40.0% |
CGGTATTGTCTGAAAACTCT+TGG | + | chr3_3:87279756-87279775 | Msa0481380:intron | 40.0% | |
CACCATTGAGACACAAACAA+TGG | - | chr3_3:87280374-87280393 | None:intergenic | 40.0% | |
CATTGTTTGTGTCTCAATGG+TGG | + | chr3_3:87280372-87280391 | Msa0481380:intron | 40.0% | |
TCTTGAAACAGGTTAGGACA+AGG | + | chr3_3:87280450-87280469 | Msa0481380:intron | 40.0% | |
ACTAGGCAGCAAAATACTGA+CGG | - | chr3_3:87281052-87281071 | None:intergenic | 40.0% | |
! | CTGCCTAGTTCTTGAATGTT+TGG | + | chr3_3:87281063-87281082 | Msa0481380:intron | 40.0% |
GCTTCTACTCATCAATTGGT+TGG | + | chr3_3:87281247-87281266 | Msa0481380:intron | 40.0% | |
GCAGAAAACAGAACTACTAG+AGG | - | chr3_3:87281280-87281299 | None:intergenic | 40.0% | |
! | CTCCAACAATGGCTTTACTT+TGG | + | chr3_3:87281364-87281383 | Msa0481380:intron | 40.0% |
ATGTGGTTATCTGTGTAGCA+TGG | + | chr3_3:87281423-87281442 | Msa0481380:intron | 40.0% | |
GAGGTTTGGAAACAATTGTG+GGG | - | chr3_3:87281465-87281484 | None:intergenic | 40.0% | |
CTGAGGTTTGGAAACAATTG+TGG | - | chr3_3:87281467-87281486 | None:intergenic | 40.0% | |
ACTAAAACAGAAGGTGGTGT+CGG | - | chr3_3:87281535-87281554 | None:intergenic | 40.0% | |
GATGAAACAACAACACGACT+AGG | + | chr3_3:87282009-87282028 | Msa0481380:intron | 40.0% | |
TAAAGTTACTACCAGGTCAG+GGG | + | chr3_3:87282042-87282061 | Msa0481380:intron | 40.0% | |
TTTCGTAAGCTTCAACTCGA+GGG | + | chr3_3:87282254-87282273 | Msa0481380:intron | 40.0% | |
GCTAATAACTTGAGCTCAGA+TGG | - | chr3_3:87282381-87282400 | None:intergenic | 40.0% | |
GCGCCAAATCTTTCAGAATT+TGG | + | chr3_3:87282634-87282653 | Msa0481380:intron | 40.0% | |
ACGTTTATATAGGTGGGGTA+CGG | - | chr3_3:87282675-87282694 | None:intergenic | 40.0% | |
!! | AGAGAATGCTCTAGAGTGAT+AGG | - | chr3_3:87282854-87282873 | None:intergenic | 40.0% |
!! | TTCCTTTCTAGGATGAGAGT+AGG | + | chr3_3:87283600-87283619 | Msa0481380:intron | 40.0% |
GTTCGGTCTTCAATGAATGA+TGG | + | chr3_3:87283899-87283918 | Msa0481380:CDS | 40.0% | |
AAGTTTGGGTGATAGATTGC+AGG | + | chr3_3:87284026-87284045 | Msa0481380:three_prime_UTR | 40.0% | |
GGTGATTAAACTGATGCCTT+TGG | + | chr3_3:87284271-87284290 | Msa0481380:three_prime_UTR | 40.0% | |
AGAAGAGAAGAAGAAGAGGG+TGG | - | chr3_3:87273241-87273260 | None:intergenic | 45.0% | |
GAAGAAGAGGAAGCAAAGAG+AGG | - | chr3_3:87273298-87273317 | None:intergenic | 45.0% | |
CGAGTCCACATACAACATGA+TGG | + | chr3_3:87274216-87274235 | Msa0481380:intron | 45.0% | |
TGGAGCTGATACTGCTATAC+TGG | + | chr3_3:87274510-87274529 | Msa0481380:intron | 45.0% | |
!! | GTGGCCCTTCTAAGATGATT+GGG | - | chr3_3:87274684-87274703 | None:intergenic | 45.0% |
!! | AGTGGCCCTTCTAAGATGAT+TGG | - | chr3_3:87274685-87274704 | None:intergenic | 45.0% |
TCATCTTAGAAGGGCCACTA+TGG | + | chr3_3:87274686-87274705 | Msa0481380:intron | 45.0% | |
ACCTTGTCTATCCTCCATAG+TGG | - | chr3_3:87274703-87274722 | None:intergenic | 45.0% | |
ATGGAGGATAGACAAGGTGA+AGG | + | chr3_3:87274705-87274724 | Msa0481380:intron | 45.0% | |
CGACCTATAGACATCATCCA+TGG | + | chr3_3:87274800-87274819 | Msa0481380:intron | 45.0% | |
CTGCCATGGATGATGTCTAT+AGG | - | chr3_3:87274806-87274825 | None:intergenic | 45.0% | |
CCGTGAACACTATTATGCAG+AGG | - | chr3_3:87275250-87275269 | None:intergenic | 45.0% | |
TCTATTCCAGCAAAAGGCTC+TGG | + | chr3_3:87275492-87275511 | Msa0481380:intron | 45.0% | |
! | ATTAGAGCGCCTAACATGAC+AGG | + | chr3_3:87275707-87275726 | Msa0481380:intron | 45.0% |
! | TGCAGTGAAACTTTTCCCAG+TGG | + | chr3_3:87275750-87275769 | Msa0481380:intron | 45.0% |
! | GTCTAAAGCCAAACATCCAC+TGG | - | chr3_3:87275769-87275788 | None:intergenic | 45.0% |
! | TTAGGTGGTGGTCTTCCAAA+AGG | + | chr3_3:87275795-87275814 | Msa0481380:CDS | 45.0% |
! | AATAGCATGAAGTGCTAGGG+TGG | - | chr3_3:87276145-87276164 | None:intergenic | 45.0% |
! | CTGCAATAGCATGAAGTGCT+AGG | - | chr3_3:87276149-87276168 | None:intergenic | 45.0% |
TATGTCATGCAGAAGCTAGG+AGG | + | chr3_3:87276270-87276289 | Msa0481380:intron | 45.0% | |
!! | CCTACCGCTTTAGAATATGC+TGG | - | chr3_3:87276333-87276352 | None:intergenic | 45.0% |
!! | CCAGCATATTCTAAAGCGGT+AGG | + | chr3_3:87276330-87276349 | Msa0481380:CDS | 45.0% |
ATCCATTCCAACACAACCAC+AGG | - | chr3_3:87276428-87276447 | None:intergenic | 45.0% | |
GGTGCCCATATTGCATTATC+AGG | + | chr3_3:87276462-87276481 | Msa0481380:intron | 45.0% | |
!! | TGCATTATCAGGGTGCTGTA+TGG | + | chr3_3:87276473-87276492 | Msa0481380:intron | 45.0% |
GCAGATCGTATGTGTAGATC+TGG | + | chr3_3:87276532-87276551 | Msa0481380:CDS | 45.0% | |
GTCCACGCAAATGAGATCTA+TGG | - | chr3_3:87276560-87276579 | None:intergenic | 45.0% | |
TTCACTTCAACTTCTGCTCG+GGG | - | chr3_3:87276601-87276620 | None:intergenic | 45.0% | |
GTTCACTTCAACTTCTGCTC+GGG | - | chr3_3:87276602-87276621 | None:intergenic | 45.0% | |
AATGCAGCAAATGGGATTGC+AGG | + | chr3_3:87276723-87276742 | Msa0481380:CDS | 45.0% | |
CAGACATCTTACGCAAAGCT+TGG | - | chr3_3:87276762-87276781 | None:intergenic | 45.0% | |
CAAGCTTTGCGTAAGATGTC+TGG | + | chr3_3:87276760-87276779 | Msa0481380:CDS | 45.0% | |
!! | TCTGGAAATGCCTCTAAAGC+TGG | + | chr3_3:87276778-87276797 | Msa0481380:CDS | 45.0% |
GGAAATCCAGAAGTGACAAG+TGG | + | chr3_3:87276987-87277006 | Msa0481380:CDS | 45.0% | |
AATCCAGAAGTGACAAGTGG+TGG | + | chr3_3:87276990-87277009 | Msa0481380:CDS | 45.0% | |
! | ATTCCACCACTTGTCACTTC+TGG | - | chr3_3:87276996-87277015 | None:intergenic | 45.0% |
GCCAAAGGAGATGAAGAAGT+TGG | + | chr3_3:87277268-87277287 | Msa0481380:CDS | 45.0% | |
GCCAACTTCTTCATCTCCTT+TGG | - | chr3_3:87277272-87277291 | None:intergenic | 45.0% | |
CTTGTAGTAAGGCATGGACA+TGG | + | chr3_3:87277430-87277449 | Msa0481380:intron | 45.0% | |
AGGCATGGACATGGGTTTAT+TGG | + | chr3_3:87277439-87277458 | Msa0481380:intron | 45.0% | |
GACATGGGTTTATTGGTGAG+CGG | + | chr3_3:87277446-87277465 | Msa0481380:intron | 45.0% | |
CTGAGGAATCAATTCTTCCG+TGG | - | chr3_3:87277535-87277554 | None:intergenic | 45.0% | |
! | TTCTGGAAAGTTAGGGACTG+AGG | - | chr3_3:87277552-87277571 | None:intergenic | 45.0% |
GTCCCTAACTTTCCAGAACT+CGG | + | chr3_3:87277554-87277573 | Msa0481380:intron | 45.0% | |
!! | TGCCGAGTTCTGGAAAGTTA+GGG | - | chr3_3:87277559-87277578 | None:intergenic | 45.0% |
!! | TTGCCGAGTTCTGGAAAGTT+AGG | - | chr3_3:87277560-87277579 | None:intergenic | 45.0% |
TGTGTGTCTGAATAGCACAC+CGG | - | chr3_3:87277866-87277885 | None:intergenic | 45.0% | |
AATAAGAGAGAGGTCATCCG+TGG | + | chr3_3:87278765-87278784 | Msa0481380:intron | 45.0% | |
! | GACTCGGTCTTGATGTTTGT+TGG | + | chr3_3:87278799-87278818 | Msa0481380:intron | 45.0% |
ACCGATGACCAACTTGGAAT+TGG | + | chr3_3:87278851-87278870 | Msa0481380:intron | 45.0% | |
AGTCAAAATCTCGACAGCTG+TGG | - | chr3_3:87278920-87278939 | None:intergenic | 45.0% | |
AAGGGCTCTTGGTACAGTTA+TGG | + | chr3_3:87279726-87279745 | Msa0481380:intron | 45.0% | |
AGGGCTCTTGGTACAGTTAT+GGG | + | chr3_3:87279727-87279746 | Msa0481380:intron | 45.0% | |
TTCGCAAATCCCAATGTTGG+AGG | - | chr3_3:87279843-87279862 | None:intergenic | 45.0% | |
TCCAACATTGGGATTTGCGA+AGG | + | chr3_3:87279842-87279861 | Msa0481380:intron | 45.0% | |
TCCTTCGCAAATCCCAATGT+TGG | - | chr3_3:87279846-87279865 | None:intergenic | 45.0% | |
AAAGAAACACGGAAGGGAAG+AGG | - | chr3_3:87280276-87280295 | None:intergenic | 45.0% | |
AGGATCCCATGTTGAAGTTG+TGG | - | chr3_3:87281004-87281023 | None:intergenic | 45.0% | |
ACTTCAACATGGGATCCTAG+TGG | + | chr3_3:87281006-87281025 | Msa0481380:intron | 45.0% | |
TCATTGAGGATCGAACCACT+AGG | - | chr3_3:87281024-87281043 | None:intergenic | 45.0% | |
CTAGGCAGCAAAATACTGAC+GGG | - | chr3_3:87281051-87281070 | None:intergenic | 45.0% | |
ACATGTGACCACCGAAACAA+AGG | - | chr3_3:87281188-87281207 | None:intergenic | 45.0% | |
!! | GTGTTGGGTGGTTTTGCTTT+TGG | + | chr3_3:87281328-87281347 | Msa0481380:intron | 45.0% |
TGTTTGCGACTCTCCAACAA+TGG | + | chr3_3:87281353-87281372 | Msa0481380:intron | 45.0% | |
GTTATCTGTGTAGCATGGTG+TGG | + | chr3_3:87281428-87281447 | Msa0481380:intron | 45.0% | |
ATCGTTAGGATTTCCGCTTC+AGG | + | chr3_3:87281555-87281574 | Msa0481380:intron | 45.0% | |
!! | AGGACTTTTCCAGATGGACT+TGG | - | chr3_3:87281957-87281976 | None:intergenic | 45.0% |
AAAGTTACTACCAGGTCAGG+GGG | + | chr3_3:87282043-87282062 | Msa0481380:intron | 45.0% | |
CAAAACGTCGATAACTGCCA+GGG | - | chr3_3:87282082-87282101 | None:intergenic | 45.0% | |
ACAAAACGTCGATAACTGCC+AGG | - | chr3_3:87282083-87282102 | None:intergenic | 45.0% | |
! | GGCAGTTATCGACGTTTTGT+TGG | + | chr3_3:87282083-87282102 | Msa0481380:intron | 45.0% |
GTTTCGTAAGCTTCAACTCG+AGG | + | chr3_3:87282253-87282272 | Msa0481380:intron | 45.0% | |
TGCCTACTCTCATCCTAGAA+AGG | - | chr3_3:87283605-87283624 | None:intergenic | 45.0% | |
TTTCGAGACACATTCGTGCA+TGG | - | chr3_3:87283752-87283771 | None:intergenic | 45.0% | |
TCTTCGTCTTGATGAAGCAC+CGG | - | chr3_3:87283962-87283981 | None:intergenic | 45.0% | |
!! | CACCGGTTCTACCATTAAAC+TGG | - | chr3_3:87284234-87284253 | None:intergenic | 45.0% |
!!! | TACTTTTATTATATAATTTA+GGG | + | chr3_3:87276648-87276667 | Msa0481380:intron | 5.0% |
!! | ATACATTAATATAAAAAATA+GGG | - | chr3_3:87276690-87276709 | None:intergenic | 5.0% |
!! | TATACATTAATATAAAAAAT+AGG | - | chr3_3:87276691-87276710 | None:intergenic | 5.0% |
!!! | TATTTTTTATATTAATGTAT+AGG | + | chr3_3:87276690-87276709 | Msa0481380:intron | 5.0% |
!!! | ATTTTTTATATTAATGTATA+GGG | + | chr3_3:87276691-87276710 | Msa0481380:intron | 5.0% |
!! | AAAAAAAAAAAAAAAAGATT+TGG | + | chr3_3:87279192-87279211 | Msa0481380:intron | 5.0% |
CAAAGAGAGGAGGCAAAGAG+TGG | - | chr3_3:87273285-87273304 | None:intergenic | 50.0% | |
GAAGAGGAAGCAAAGAGAGG+AGG | - | chr3_3:87273295-87273314 | None:intergenic | 50.0% | |
TTGACGCTCGCTTCGTTGAT+AGG | + | chr3_3:87273371-87273390 | Msa0481380:CDS | 50.0% | |
TGACGCTCGCTTCGTTGATA+GGG | + | chr3_3:87273372-87273391 | Msa0481380:CDS | 50.0% | |
! | GAGCGGATTTCCTTCCTGTT+GGG | - | chr3_3:87273881-87273900 | None:intergenic | 50.0% |
! | AGAGCGGATTTCCTTCCTGT+TGG | - | chr3_3:87273882-87273901 | None:intergenic | 50.0% |
CAAAAGCTTCCGCATGCACA+GGG | - | chr3_3:87274390-87274409 | None:intergenic | 50.0% | |
ACAAAAGCTTCCGCATGCAC+AGG | - | chr3_3:87274391-87274410 | None:intergenic | 50.0% | |
! | ATGCGGAAGCTTTTGTGCAC+CGG | + | chr3_3:87274395-87274414 | Msa0481380:intron | 50.0% |
! | TGGTAGAGTTTTGCCGTAGG+TGG | + | chr3_3:87274644-87274663 | Msa0481380:intron | 50.0% |
TCTTAGAAGGGCCACTATGG+AGG | + | chr3_3:87274689-87274708 | Msa0481380:intron | 50.0% | |
GCCACTATGGAGGATAGACA+AGG | + | chr3_3:87274699-87274718 | Msa0481380:intron | 50.0% | |
ATCGTGTGCCAACCAGATCA+TGG | + | chr3_3:87276372-87276391 | Msa0481380:CDS | 50.0% | |
CCATCTCTCCATGATCTGGT+TGG | - | chr3_3:87276383-87276402 | None:intergenic | 50.0% | |
CCAACCAGATCATGGAGAGA+TGG | + | chr3_3:87276380-87276399 | Msa0481380:CDS | 50.0% | |
AGAGCCATCTCTCCATGATC+TGG | - | chr3_3:87276387-87276406 | None:intergenic | 50.0% | |
CCAACACAACCACAGGTCAA+AGG | - | chr3_3:87276421-87276440 | None:intergenic | 50.0% | |
CCTTTGACCTGTGGTTGTGT+TGG | + | chr3_3:87276418-87276437 | Msa0481380:intron | 50.0% | |
GACCTGTGGTTGTGTTGGAA+TGG | + | chr3_3:87276423-87276442 | Msa0481380:intron | 50.0% | |
CGCCATAGATCTCATTTGCG+TGG | + | chr3_3:87276555-87276574 | Msa0481380:CDS | 50.0% | |
AATGATACCACATGTCGCGG+AGG | + | chr3_3:87277586-87277605 | Msa0481380:intron | 50.0% | |
TGTCTGAATAGCACACCGGA+AGG | - | chr3_3:87277862-87277881 | None:intergenic | 50.0% | |
CCTATCCAAGATCCACCGTT+GGG | + | chr3_3:87277937-87277956 | Msa0481380:intron | 50.0% | |
ATGGCAATGCGGAATCCCAA+CGG | - | chr3_3:87277955-87277974 | None:intergenic | 50.0% | |
TTGCCATGCTTCATGCCCAT+TGG | + | chr3_3:87277968-87277987 | Msa0481380:intron | 50.0% | |
TGCCATGCTTCATGCCCATT+GGG | + | chr3_3:87277969-87277988 | Msa0481380:intron | 50.0% | |
! | TTTTGTGTGGTTGCTGTCGG+AGG | + | chr3_3:87278696-87278715 | Msa0481380:intron | 50.0% |
GGCTTAACCATGACGTTGGT+CGG | + | chr3_3:87278717-87278736 | Msa0481380:intron | 50.0% | |
CATGACGTTGGTCGGATGAT+GGG | + | chr3_3:87278725-87278744 | Msa0481380:intron | 50.0% | |
CAGAACTACCAGAGACTGAG+AGG | + | chr3_3:87278826-87278845 | Msa0481380:intron | 50.0% | |
AATGAGGACACGCCCTTTAG+AGG | - | chr3_3:87279027-87279046 | None:intergenic | 50.0% | |
! | AGGGCGTGTCCTCATTTTAG+AGG | + | chr3_3:87279031-87279050 | Msa0481380:intron | 50.0% |
TGGAGAGGGAGTCAATAAGC+TGG | + | chr3_3:87279585-87279604 | Msa0481380:CDS | 50.0% | |
GGGCTCTTGGTACAGTTATG+GGG | + | chr3_3:87279728-87279747 | Msa0481380:intron | 50.0% | |
GGTACAGTTATGGGGACCAT+CGG | + | chr3_3:87279736-87279755 | Msa0481380:intron | 50.0% | |
! | GTTTGTGTCTCAATGGTGGG+TGG | + | chr3_3:87280376-87280395 | Msa0481380:intron | 50.0% |
TCGCTTCAACTACCAGTTCC+TGG | + | chr3_3:87281208-87281227 | Msa0481380:intron | 50.0% | |
AACTATTGGGAGCTGACGAG+AGG | - | chr3_3:87281302-87281321 | None:intergenic | 50.0% | |
TGTAGCATGGTGTGGCACTT+TGG | + | chr3_3:87281436-87281455 | Msa0481380:intron | 50.0% | |
ATTTCCGCTTCAGGTAGCAC+TGG | + | chr3_3:87281564-87281583 | Msa0481380:intron | 50.0% | |
!! | GCTGTGACGTCTTCTGGTTT+GGG | + | chr3_3:87281692-87281711 | Msa0481380:intron | 50.0% |
TAACTGCCAGGGTCTTTCAG+TGG | - | chr3_3:87282071-87282090 | None:intergenic | 50.0% | |
AGTTCAACCGGTTGCATCAC+CGG | - | chr3_3:87284251-87284270 | None:intergenic | 50.0% | |
GATGCCTTTGGTTGGGTAGT+CGG | + | chr3_3:87284283-87284302 | Msa0481380:three_prime_UTR | 50.0% | |
! | GGGAAGGGGTCTCACCATTT+TGG | - | chr3_3:87274364-87274383 | None:intergenic | 55.0% |
! | TGCGGAAGCTTTTGTGCACC+GGG | + | chr3_3:87274396-87274415 | Msa0481380:intron | 55.0% |
! | CTGCTTCCAGAGCCTTTTGC+TGG | - | chr3_3:87275501-87275520 | None:intergenic | 55.0% |
GTTACGAGATTGGGCAGTGC+TGG | + | chr3_3:87275559-87275578 | Msa0481380:CDS | 55.0% | |
GTGGTCTTCCCACTGCTTTC+TGG | - | chr3_3:87276126-87276145 | None:intergenic | 55.0% | |
ATACCACATGTCGCGGAGGA+TGG | + | chr3_3:87277590-87277609 | Msa0481380:intron | 55.0% | |
GCCTATCCAAGATCCACCGT+TGG | + | chr3_3:87277936-87277955 | Msa0481380:intron | 55.0% | |
CCCAACGGTGGATCTTGGAT+AGG | - | chr3_3:87277940-87277959 | None:intergenic | 55.0% | |
GGAATCCCAACGGTGGATCT+TGG | - | chr3_3:87277945-87277964 | None:intergenic | 55.0% | |
GGGCATGAAGCATGGCAATG+CGG | - | chr3_3:87277966-87277985 | None:intergenic | 55.0% | |
GACCCAATGGGCATGAAGCA+TGG | - | chr3_3:87277974-87277993 | None:intergenic | 55.0% | |
CGGAGGCTTAACCATGACGT+TGG | + | chr3_3:87278713-87278732 | Msa0481380:intron | 55.0% | |
CCATCATCCGACCAACGTCA+TGG | - | chr3_3:87278727-87278746 | None:intergenic | 55.0% | |
CCATGACGTTGGTCGGATGA+TGG | + | chr3_3:87278724-87278743 | Msa0481380:intron | 55.0% | |
ATCGGTCACCTCTCAGTCTC+TGG | - | chr3_3:87278837-87278856 | None:intergenic | 55.0% | |
GAGGTGACCGATGACCAACT+TGG | + | chr3_3:87278845-87278864 | Msa0481380:intron | 55.0% | |
! | TACTGACGGGCAGGTCATTG+AGG | - | chr3_3:87281038-87281057 | None:intergenic | 55.0% |
! | GCAGCAAAATACTGACGGGC+AGG | - | chr3_3:87281047-87281066 | None:intergenic | 55.0% |
GGACTTCAAGCACCAGGAAC+TGG | - | chr3_3:87281223-87281242 | None:intergenic | 55.0% | |
GCACATGGACTTCAAGCACC+AGG | - | chr3_3:87281229-87281248 | None:intergenic | 55.0% | |
!! | GAAGGTGGTGTCGGTAGTGT+TGG | - | chr3_3:87281526-87281545 | None:intergenic | 55.0% |
TGGACCAGTGCTACCTGAAG+CGG | - | chr3_3:87281571-87281590 | None:intergenic | 55.0% | |
GTTGACGCTGTGACGTCTTC+TGG | + | chr3_3:87281686-87281705 | Msa0481380:intron | 55.0% | |
! | CGCTGTGACGTCTTCTGGTT+TGG | + | chr3_3:87281691-87281710 | Msa0481380:intron | 55.0% |
GGTAGAACCGGTGATGCAAC+CGG | + | chr3_3:87284241-87284260 | Msa0481380:three_prime_UTR | 55.0% | |
GGTGATGCAACCGGTTGAAC+TGG | + | chr3_3:87284250-87284269 | Msa0481380:three_prime_UTR | 55.0% | |
CAGTCCGACTACCCAACCAA+AGG | - | chr3_3:87284290-87284309 | None:intergenic | 55.0% | |
CTTTGGTTGGGTAGTCGGAC+TGG | + | chr3_3:87284288-87284307 | Msa0481380:three_prime_UTR | 55.0% | |
CATGCACAGGGTACGGGAAG+GGG | - | chr3_3:87274378-87274397 | None:intergenic | 60.0% | |
GCATGCACAGGGTACGGGAA+GGG | - | chr3_3:87274379-87274398 | None:intergenic | 60.0% | |
CTTCCCGTACCCTGTGCATG+CGG | + | chr3_3:87274378-87274397 | Msa0481380:intron | 60.0% | |
CTTCCGCATGCACAGGGTAC+GGG | - | chr3_3:87274384-87274403 | None:intergenic | 60.0% | |
GCTTCCGCATGCACAGGGTA+CGG | - | chr3_3:87274385-87274404 | None:intergenic | 60.0% | |
! | ACGAGATTGGGCAGTGCTGG+TGG | + | chr3_3:87275562-87275581 | Msa0481380:CDS | 60.0% |
TCGGGGAGTGAGAGCTGAGA+CGG | - | chr3_3:87276584-87276603 | None:intergenic | 60.0% | |
GTACCATCCTCCGCGACATG+TGG | - | chr3_3:87277596-87277615 | None:intergenic | 60.0% | |
GCAATGCGGAATCCCAACGG+TGG | - | chr3_3:87277952-87277971 | None:intergenic | 60.0% | |
CCCTCACGCTCAGACCCAAT+GGG | - | chr3_3:87277986-87278005 | None:intergenic | 60.0% | |
CCCATTGGGTCTGAGCGTGA+GGG | + | chr3_3:87277983-87278002 | Msa0481380:intron | 60.0% | |
CCATTGGGTCTGAGCGTGAG+GGG | + | chr3_3:87277984-87278003 | Msa0481380:intron | 60.0% | |
CATTGGGTCTGAGCGTGAGG+GGG | + | chr3_3:87277985-87278004 | Msa0481380:intron | 60.0% | |
!!! | CTGAGCGTGAGGGGGTGTTT+TGG | + | chr3_3:87277993-87278012 | Msa0481380:intron | 60.0% |
AATCCCCTCCCGAGCATGAG+AGG | + | chr3_3:87278017-87278036 | Msa0481380:intron | 60.0% | |
ATCCCCTCCCGAGCATGAGA+GGG | + | chr3_3:87278018-87278037 | Msa0481380:intron | 60.0% | |
ACACCCTCTCATGCTCGGGA+GGG | - | chr3_3:87278024-87278043 | None:intergenic | 60.0% | |
AGAGAGAGGTCATCCGTGGC+TGG | + | chr3_3:87278769-87278788 | Msa0481380:intron | 60.0% | |
CGAGTCGTCTACACCAGCCA+CGG | - | chr3_3:87278785-87278804 | None:intergenic | 60.0% | |
CGTGGCTGGTGTAGACGACT+CGG | + | chr3_3:87278783-87278802 | Msa0481380:intron | 60.0% | |
!! | GGTGGTGTCGGTAGTGTTGG+TGG | - | chr3_3:87281523-87281542 | None:intergenic | 60.0% |
TTCAGTGGTTCCCCCTGACC+TGG | - | chr3_3:87282056-87282075 | None:intergenic | 60.0% | |
GGGGAACCACTGAAAGACCC+TGG | + | chr3_3:87282062-87282081 | Msa0481380:intron | 60.0% | |
CGCATGCACAGGGTACGGGA+AGG | - | chr3_3:87274380-87274399 | None:intergenic | 65.0% | |
GCCCATTGGGTCTGAGCGTG+AGG | + | chr3_3:87277982-87278001 | Msa0481380:intron | 65.0% | |
CCCCTCACGCTCAGACCCAA+TGG | - | chr3_3:87277987-87278006 | None:intergenic | 65.0% | |
CACCCTCTCATGCTCGGGAG+GGG | - | chr3_3:87278023-87278042 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_3 | gene | 87273044 | 87284328 | 87273044 | ID=Msa0481380;Name=Msa0481380 |
chr3_3 | mRNA | 87273044 | 87284328 | 87273044 | ID=Msa0481380-mRNA-1;Parent=Msa0481380;Name=Msa0481380-mRNA-1;_AED=0.12;_eAED=0.12;_QI=146|0.9|1|1|0.9|0.90|11|325|369 |
chr3_3 | exon | 87273044 | 87273393 | 87273044 | ID=Msa0481380-mRNA-1:exon:25308;Parent=Msa0481380-mRNA-1 |
chr3_3 | exon | 87275502 | 87275593 | 87275502 | ID=Msa0481380-mRNA-1:exon:25309;Parent=Msa0481380-mRNA-1 |
chr3_3 | exon | 87275755 | 87275830 | 87275755 | ID=Msa0481380-mRNA-1:exon:25310;Parent=Msa0481380-mRNA-1 |
chr3_3 | exon | 87276114 | 87276176 | 87276114 | ID=Msa0481380-mRNA-1:exon:25311;Parent=Msa0481380-mRNA-1 |
chr3_3 | exon | 87276282 | 87276411 | 87276282 | ID=Msa0481380-mRNA-1:exon:25312;Parent=Msa0481380-mRNA-1 |
chr3_3 | exon | 87276530 | 87276615 | 87276530 | ID=Msa0481380-mRNA-1:exon:25313;Parent=Msa0481380-mRNA-1 |
chr3_3 | exon | 87276712 | 87276837 | 87276712 | ID=Msa0481380-mRNA-1:exon:25314;Parent=Msa0481380-mRNA-1 |
chr3_3 | exon | 87276972 | 87277076 | 87276972 | ID=Msa0481380-mRNA-1:exon:25315;Parent=Msa0481380-mRNA-1 |
chr3_3 | exon | 87277268 | 87277324 | 87277268 | ID=Msa0481380-mRNA-1:exon:25316;Parent=Msa0481380-mRNA-1 |
chr3_3 | exon | 87279544 | 87279606 | 87279544 | ID=Msa0481380-mRNA-1:exon:25317;Parent=Msa0481380-mRNA-1 |
chr3_3 | exon | 87283896 | 87284328 | 87283896 | ID=Msa0481380-mRNA-1:exon:25318;Parent=Msa0481380-mRNA-1 |
chr3_3 | five_prime_UTR | 87273044 | 87273189 | 87273044 | ID=Msa0481380-mRNA-1:five_prime_utr;Parent=Msa0481380-mRNA-1 |
chr3_3 | CDS | 87273190 | 87273393 | 87273190 | ID=Msa0481380-mRNA-1:cds;Parent=Msa0481380-mRNA-1 |
chr3_3 | CDS | 87275502 | 87275593 | 87275502 | ID=Msa0481380-mRNA-1:cds;Parent=Msa0481380-mRNA-1 |
chr3_3 | CDS | 87275755 | 87275830 | 87275755 | ID=Msa0481380-mRNA-1:cds;Parent=Msa0481380-mRNA-1 |
chr3_3 | CDS | 87276114 | 87276176 | 87276114 | ID=Msa0481380-mRNA-1:cds;Parent=Msa0481380-mRNA-1 |
chr3_3 | CDS | 87276282 | 87276411 | 87276282 | ID=Msa0481380-mRNA-1:cds;Parent=Msa0481380-mRNA-1 |
chr3_3 | CDS | 87276530 | 87276615 | 87276530 | ID=Msa0481380-mRNA-1:cds;Parent=Msa0481380-mRNA-1 |
chr3_3 | CDS | 87276712 | 87276837 | 87276712 | ID=Msa0481380-mRNA-1:cds;Parent=Msa0481380-mRNA-1 |
chr3_3 | CDS | 87276972 | 87277076 | 87276972 | ID=Msa0481380-mRNA-1:cds;Parent=Msa0481380-mRNA-1 |
chr3_3 | CDS | 87277268 | 87277324 | 87277268 | ID=Msa0481380-mRNA-1:cds;Parent=Msa0481380-mRNA-1 |
chr3_3 | CDS | 87279544 | 87279606 | 87279544 | ID=Msa0481380-mRNA-1:cds;Parent=Msa0481380-mRNA-1 |
chr3_3 | CDS | 87283896 | 87284003 | 87283896 | ID=Msa0481380-mRNA-1:cds;Parent=Msa0481380-mRNA-1 |
chr3_3 | three_prime_UTR | 87284004 | 87284328 | 87284004 | ID=Msa0481380-mRNA-1:three_prime_utr;Parent=Msa0481380-mRNA-1 |
Gene Sequence |
Protein sequence |