Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1244630 | XP_003628547.1 | 93.243 | 296 | 7 | 1 | 1 | 283 | 1 | 296 | 0.0 | 553 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1244630 | sp|Q45223|HBD_BRADU | 52.837 | 282 | 120 | 1 | 2 | 270 | 3 | 284 | 1.70e-103 | 306 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1244630 | G7LDR5 | 93.243 | 296 | 7 | 1 | 1 | 283 | 1 | 296 | 0.0 | 553 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1244630 | Msa1293550 | 0.803837 | 2.881242e-49 | -8.615850e-47 |
| Msa0417060 | Msa1244630 | 0.812146 | 4.910495e-51 | -8.615850e-47 |
| Msa0559770 | Msa1244630 | 0.811660 | 6.266214e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1244630 | MtrunA17_Chr8g0360311 | 93.243 | 296 | 7 | 1 | 1 | 283 | 1 | 296 | 0.0 | 553 |
| Msa1244630 | MtrunA17_Chr6g0485841 | 32.770 | 296 | 179 | 6 | 3 | 283 | 305 | 595 | 3.07e-35 | 134 |
| Msa1244630 | MtrunA17_Chr4g0067521 | 30.690 | 290 | 179 | 6 | 4 | 277 | 310 | 593 | 1.76e-30 | 120 |
| Msa1244630 | MtrunA17_Chr2g0295671 | 28.966 | 290 | 184 | 6 | 4 | 277 | 308 | 591 | 5.70e-29 | 115 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1244630 | AT3G15290.1 | 68.243 | 296 | 79 | 2 | 1 | 283 | 1 | 294 | 3.71e-150 | 422 |
| Msa1244630 | AT3G15290.2 | 71.489 | 235 | 52 | 2 | 62 | 283 | 3 | 235 | 3.73e-124 | 354 |
| Msa1244630 | AT4G29010.1 | 30.375 | 293 | 188 | 4 | 4 | 283 | 309 | 598 | 3.12e-34 | 131 |
| Msa1244630 | AT3G06860.1 | 28.374 | 289 | 185 | 6 | 4 | 276 | 312 | 594 | 5.71e-29 | 116 |
Find 73 sgRNAs with CRISPR-Local
Find 365 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCCAAGTCTTCTGCTATTT+TGG | 0.174978 | 8_2:-33302879 | Msa1244630:CDS |
| TCCCGTGTCAATATCCTCTT+TGG | 0.290455 | 8_2:+33299552 | None:intergenic |
| ATAACCTCCCAGGATTATTC+AGG | 0.326545 | 8_2:-33299646 | Msa1244630:CDS |
| AGATTGAGAGAGTTGGGATT+TGG | 0.346905 | 8_2:+33303036 | None:intergenic |
| AGCAGCAGATTGAGAGAGTT+GGG | 0.358288 | 8_2:+33303030 | None:intergenic |
| CTTCTCGTCTCTAAAATGTT+TGG | 0.360620 | 8_2:-33299306 | Msa1244630:exon |
| GTGAAGATGATCGGCGTGAT+AGG | 0.361456 | 8_2:-33303193 | Msa1244630:CDS |
| CCACACTTGTACTGAACTTT+GGG | 0.364816 | 8_2:-33299256 | Msa1244630:three_prime_UTR |
| AGAGAGGTCATTTATATTAG+TGG | 0.366364 | 8_2:+33302979 | None:intergenic |
| TCTAAAATGTTTGGTTTCCT+TGG | 0.368515 | 8_2:-33299297 | Msa1244630:exon |
| ACCACACTTGTACTGAACTT+TGG | 0.372128 | 8_2:-33299257 | Msa1244630:three_prime_UTR |
| CGTGATAGGCGGTGGGCAGA+TGG | 0.376266 | 8_2:-33303179 | Msa1244630:CDS |
| TTTGGAAACAAGACGGTTGA+TGG | 0.376577 | 8_2:+33303054 | None:intergenic |
| TAGAGCTTGCAGACTTCATT+GGG | 0.378385 | 8_2:-33299495 | Msa1244630:CDS |
| TTAGAGCTTGCAGACTTCAT+TGG | 0.379697 | 8_2:-33299496 | Msa1244630:CDS |
| AAGTTCTTCATGCTGGCCTT+GGG | 0.385707 | 8_2:-33299447 | Msa1244630:CDS |
| AAAGTTCTTCATGCTGGCCT+TGG | 0.388355 | 8_2:-33299448 | Msa1244630:CDS |
| TGAAATGCTTCATTTATCAT+AGG | 0.392247 | 8_2:+33299598 | None:intergenic |
| CTTCATTTATCATAGGCATA+AGG | 0.408796 | 8_2:+33299605 | None:intergenic |
| ATGAAGTCTGCAAGCTCTAA+AGG | 0.417991 | 8_2:+33299499 | None:intergenic |
| GGCGGTGGGCAGATGGGATC+AGG | 0.421643 | 8_2:-33303172 | Msa1244630:CDS |
| ACGGTTGATGGAAGAAGAAA+TGG | 0.423622 | 8_2:+33303066 | None:intergenic |
| ATCTCAATCAATTTCATCAC+TGG | 0.424578 | 8_2:+33302346 | None:intergenic |
| CTATGAAGCCTGAATAATCC+TGG | 0.456473 | 8_2:+33299638 | None:intergenic |
| TGCCATGCATGGCTGTCAGT+TGG | 0.466231 | 8_2:+33303143 | None:intergenic |
| TATGTTGATGCTGGCAGACT+TGG | 0.468053 | 8_2:-33299388 | Msa1244630:CDS |
| TATTGACACGGGAATGAAGT+TGG | 0.472291 | 8_2:-33299542 | Msa1244630:CDS |
| GGAAGAAGAAATGGAAGAAG+AGG | 0.475686 | 8_2:+33303075 | None:intergenic |
| TGAAGTCTGCAAGCTCTAAA+GGG | 0.476098 | 8_2:+33299500 | None:intergenic |
| CTTGGAAGAAAACGAGGTAT+TGG | 0.477660 | 8_2:-33299370 | Msa1244630:CDS |
| GCTTGCAGACTTCATTGGGT+TGG | 0.479670 | 8_2:-33299491 | Msa1244630:CDS |
| GTGATAGGCGGTGGGCAGAT+GGG | 0.481302 | 8_2:-33303178 | Msa1244630:CDS |
| AAGCAGCAGATTGAGAGAGT+TGG | 0.482662 | 8_2:+33303029 | None:intergenic |
| GCCATGCATGGCTGTCAGTT+GGG | 0.491078 | 8_2:+33303144 | None:intergenic |
| ATCCTCTTTGGTTGCAACGT+TGG | 0.493711 | 8_2:+33299564 | None:intergenic |
| CTTGAGAGTTGACATCTAGA+AGG | 0.494520 | 8_2:+33303110 | None:intergenic |
| ATGATCGGCGTGATAGGCGG+TGG | 0.509523 | 8_2:-33303187 | Msa1244630:CDS |
| TCTCAATCAATTTCATCACT+GGG | 0.525008 | 8_2:+33302347 | None:intergenic |
| GCAAGCTCTAAAGGGCCCAT+TGG | 0.540034 | 8_2:+33299508 | None:intergenic |
| ATTGACACGGGAATGAAGTT+GGG | 0.542886 | 8_2:-33299541 | Msa1244630:CDS |
| AGCCAAAATAGCAGAAGACT+TGG | 0.543025 | 8_2:+33302877 | None:intergenic |
| GTGAATATTTATTGTCCCCA+AGG | 0.546668 | 8_2:+33299431 | None:intergenic |
| GCTCTAAAGGGCCCATTGGA+TGG | 0.546955 | 8_2:+33299512 | None:intergenic |
| TTGGGTACTAACCATCCAAT+GGG | 0.547062 | 8_2:-33299523 | Msa1244630:CDS |
| GCTGACAACTTATTCTTCCA+AGG | 0.549625 | 8_2:+33299280 | None:intergenic |
| ATAATGAAAGTTCTTCATGC+TGG | 0.552134 | 8_2:-33299454 | Msa1244630:CDS |
| CTTGTACAGTATGTTGATGC+TGG | 0.566110 | 8_2:-33299397 | Msa1244630:CDS |
| AGCTATTGTTGAATCTGAAG+AGG | 0.569249 | 8_2:-33302936 | Msa1244630:CDS |
| GTTGGGTACTAACCATCCAA+TGG | 0.577080 | 8_2:-33299524 | Msa1244630:CDS |
| AGTTCTTCATGCTGGCCTTG+GGG | 0.587304 | 8_2:-33299446 | Msa1244630:CDS |
| AAATGTTGCATCAGAAGTGT+CGG | 0.588207 | 8_2:+33302312 | None:intergenic |
| AGCTAAACGAGTGATAGAGA+TGG | 0.589799 | 8_2:+33302841 | None:intergenic |
| ATGGCGGATGTGAAGATGAT+CGG | 0.590191 | 8_2:-33303202 | Msa1244630:CDS |
| GGTACACTACTGAAATTGAG+TGG | 0.591243 | 8_2:-33299235 | Msa1244630:three_prime_UTR |
| TATGAAGCCTGAATAATCCT+GGG | 0.592603 | 8_2:+33299639 | None:intergenic |
| TCAACATACTGTACAAGTAG+AGG | 0.598353 | 8_2:+33299403 | None:intergenic |
| GCAGACGTCGATGCCATGCA+TGG | 0.599710 | 8_2:+33303132 | None:intergenic |
| CACCAACGTTGCAACCAAAG+AGG | 0.600124 | 8_2:-33299566 | Msa1244630:CDS |
| TACTGTACAAGTAGAGGGCA+AGG | 0.600994 | 8_2:+33299409 | None:intergenic |
| CAAGACAGTAATAACCTCCC+AGG | 0.607252 | 8_2:-33299656 | Msa1244630:CDS |
| GTTGGGATTTGGAAACAAGA+CGG | 0.623816 | 8_2:+33303047 | None:intergenic |
| ACCAAAGAGGATATTGACAC+GGG | 0.632566 | 8_2:-33299553 | Msa1244630:CDS |
| CTCAATCAATTTCATCACTG+GGG | 0.636264 | 8_2:+33302348 | None:intergenic |
| CCCAAAGTTCAGTACAAGTG+TGG | 0.646716 | 8_2:+33299256 | None:intergenic |
| TCAATCAATTTCATCACTGG+GGG | 0.649968 | 8_2:+33302349 | None:intergenic |
| CAACATACTGTACAAGTAGA+GGG | 0.650224 | 8_2:+33299404 | None:intergenic |
| AACCAAAGAGGATATTGACA+CGG | 0.650319 | 8_2:-33299554 | Msa1244630:CDS |
| AAGATGATCGGCGTGATAGG+CGG | 0.661602 | 8_2:-33303190 | Msa1244630:CDS |
| GGCAGACTTGGAAGAAAACG+AGG | 0.681439 | 8_2:-33299376 | Msa1244630:CDS |
| TAATGAAATCAGCAACAGAG+AGG | 0.696153 | 8_2:+33302963 | None:intergenic |
| GAAGCCTGAATAATCCTGGG+AGG | 0.727589 | 8_2:+33299642 | None:intergenic |
| CCACAAAAGCACTATCACAG+AGG | 0.763398 | 8_2:-33302285 | Msa1244630:intron |
| AAATTGATTGAGATTGTACG+AGG | 0.766743 | 8_2:-33302337 | Msa1244630:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTATTATAGAAAATTTATTA+TGG | + | chr8_2:33300944-33300963 | None:intergenic | 10.0% |
| !! | TAAATTATAATCATACAAAG+TGG | + | chr8_2:33300158-33300177 | None:intergenic | 15.0% |
| !! | TATTTACTATAATTGTTCTA+TGG | + | chr8_2:33300368-33300387 | None:intergenic | 15.0% |
| !!! | AATAAATTTTCTATAATAGC+CGG | - | chr8_2:33300945-33300964 | Msa1244630:intron | 15.0% |
| !! | TAGAATATACAAAAACAAAA+TGG | - | chr8_2:33301945-33301964 | Msa1244630:intron | 15.0% |
| !!! | TTAAATTATGAGTATTTTGT+CGG | - | chr8_2:33302463-33302482 | Msa1244630:intron | 15.0% |
| !! | GGAATTAATGAAAAAAATGT+AGG | + | chr8_2:33299854-33299873 | None:intergenic | 20.0% |
| !!! | CACAATTTTAATCTATCAAA+TGG | + | chr8_2:33299966-33299985 | None:intergenic | 20.0% |
| !! | GAATTAATTGTTAATGTATG+TGG | - | chr8_2:33300314-33300333 | Msa1244630:intron | 20.0% |
| !!! | GAAAATTTATTATGGGTTAT+GGG | + | chr8_2:33300936-33300955 | None:intergenic | 20.0% |
| !!! | AGAAAATTTATTATGGGTTA+TGG | + | chr8_2:33300937-33300956 | None:intergenic | 20.0% |
| !! | GGATATTTAGATTTGATAAA+GGG | + | chr8_2:33301586-33301605 | None:intergenic | 20.0% |
| !! | AGGATATTTAGATTTGATAA+AGG | + | chr8_2:33301587-33301606 | None:intergenic | 20.0% |
| !!! | CATGAACTTTTTAAATAATG+TGG | - | chr8_2:33302188-33302207 | Msa1244630:intron | 20.0% |
| !!! | TAAATTATGAGTATTTTGTC+GGG | - | chr8_2:33302464-33302483 | Msa1244630:intron | 20.0% |
| !! | TAGCAATATATTACATTCTA+GGG | + | chr8_2:33302507-33302526 | None:intergenic | 20.0% |
| !! | ATAGCAATATATTACATTCT+AGG | + | chr8_2:33302508-33302527 | None:intergenic | 20.0% |
| !! | TTAAAGGTAATTAAGCATAA+AGG | + | chr8_2:33302575-33302594 | None:intergenic | 20.0% |
| ! | AACAAAACAAAAGAAGAAGA+AGG | + | chr8_2:33299608-33299627 | None:intergenic | 25.0% |
| ! | CCGTTTACAATTTATGTTTA+CGG | + | chr8_2:33299823-33299842 | None:intergenic | 25.0% |
| ! | CCGTAAACATAAATTGTAAA+CGG | - | chr8_2:33299820-33299839 | Msa1244630:intron | 25.0% |
| ! | CGTAAACATAAATTGTAAAC+GGG | - | chr8_2:33299821-33299840 | Msa1244630:intron | 25.0% |
| ! | AAAAATTGCTAAACCAAAAG+TGG | + | chr8_2:33299930-33299949 | None:intergenic | 25.0% |
| !!! | ACTTTTGGTTTAGCAATTTT+TGG | - | chr8_2:33299929-33299948 | Msa1244630:intron | 25.0% |
| ! | TCTATCAAATGGAAAACAAT+AGG | + | chr8_2:33299955-33299974 | None:intergenic | 25.0% |
| ! | ATTATAATCATACAAAGTGG+AGG | + | chr8_2:33300155-33300174 | None:intergenic | 25.0% |
| ! | TAGTAAATAACAGTGTGAAT+TGG | - | chr8_2:33300379-33300398 | Msa1244630:intron | 25.0% |
| ! | ATATTCAACGAAAAAGAAAG+TGG | + | chr8_2:33300588-33300607 | None:intergenic | 25.0% |
| ! | AAAAATAAGAATTGACGACA+AGG | + | chr8_2:33300732-33300751 | None:intergenic | 25.0% |
| ! | CAAAATGGTTTAGAAAAATC+CGG | - | chr8_2:33300812-33300831 | Msa1244630:intron | 25.0% |
| ! | GAAAAATATGTTTGGATCAA+GGG | + | chr8_2:33301171-33301190 | None:intergenic | 25.0% |
| ! | TGAAAAATATGTTTGGATCA+AGG | + | chr8_2:33301172-33301191 | None:intergenic | 25.0% |
| ! | AATCAGGTGAAAAATATGTT+TGG | + | chr8_2:33301179-33301198 | None:intergenic | 25.0% |
| ! | AATCTAAATATCCTAAATCC+AGG | - | chr8_2:33301593-33301612 | Msa1244630:intron | 25.0% |
| ! | ACCTATCAAATATATAACGT+AGG | - | chr8_2:33302069-33302088 | Msa1244630:intron | 25.0% |
| ! | ACCTACGTTATATATTTGAT+AGG | + | chr8_2:33302073-33302092 | None:intergenic | 25.0% |
| ! | GAGGATAACTAAACAAAAAA+AGG | + | chr8_2:33302217-33302236 | None:intergenic | 25.0% |
| !!! | TTTTTGTTTAGTTATCCTCT+AGG | - | chr8_2:33302218-33302237 | Msa1244630:intron | 25.0% |
| ! | CATATGAAAATTCACCATTT+GGG | + | chr8_2:33302301-33302320 | None:intergenic | 25.0% |
| !!! | TCTAGGGTTAATTACATTTT+CGG | + | chr8_2:33302491-33302510 | None:intergenic | 25.0% |
| !!! | ATTGTTTTTATAATTTGCGC+TGG | - | chr8_2:33302688-33302707 | Msa1244630:intron | 25.0% |
| ! | TGAAATGCTTCATTTATCAT+AGG | + | chr8_2:33302795-33302814 | None:intergenic | 25.0% |
| AGAGAGGTCATTTATATTAG+TGG | + | chr8_2:33299414-33299433 | None:intergenic | 30.0% | |
| CATTGTATCAATACATCTCA+CGG | + | chr8_2:33299765-33299784 | None:intergenic | 30.0% | |
| ! | TATGTTTACGGCCAATTTTA+TGG | + | chr8_2:33299811-33299830 | None:intergenic | 30.0% |
| AACATAAATTGTAAACGGGT+CGG | - | chr8_2:33299825-33299844 | Msa1244630:intron | 30.0% | |
| ! | TAAAATTGTGCTGTGTTGTT+TGG | - | chr8_2:33299976-33299995 | Msa1244630:intron | 30.0% |
| TCTCAATCAATTTCATCACT+GGG | + | chr8_2:33300046-33300065 | None:intergenic | 30.0% | |
| ATCTCAATCAATTTCATCAC+TGG | + | chr8_2:33300047-33300066 | None:intergenic | 30.0% | |
| AAATTGATTGAGATTGTACG+AGG | - | chr8_2:33300053-33300072 | Msa1244630:intron | 30.0% | |
| !! | ACATTTTTCAGAGTAACAAC+AGG | + | chr8_2:33300263-33300282 | None:intergenic | 30.0% |
| AATGTGAATGTTACCTATGT+TGG | - | chr8_2:33300278-33300297 | Msa1244630:intron | 30.0% | |
| AATTGTTCTATGGTTTCTGT+TGG | + | chr8_2:33300358-33300377 | None:intergenic | 30.0% | |
| AAATAACAGTGTGAATTGGA+TGG | - | chr8_2:33300383-33300402 | Msa1244630:intron | 30.0% | |
| GTTATTGAAATTTCTTGGTC+TGG | + | chr8_2:33300471-33300490 | None:intergenic | 30.0% | |
| ! | AATCTTTGAAGATCTTGAGA+AGG | + | chr8_2:33300864-33300883 | None:intergenic | 30.0% |
| GAAAATAGCTAAACCATTGA+AGG | + | chr8_2:33300914-33300933 | None:intergenic | 30.0% | |
| !! | GATGATGAGTATTGATTATG+GGG | + | chr8_2:33301081-33301100 | None:intergenic | 30.0% |
| !! | GGATGATGAGTATTGATTAT+GGG | + | chr8_2:33301082-33301101 | None:intergenic | 30.0% |
| !! | TGGATGATGAGTATTGATTA+TGG | + | chr8_2:33301083-33301102 | None:intergenic | 30.0% |
| ATAATCAATACTCATCATCC+AGG | - | chr8_2:33301082-33301101 | Msa1244630:intron | 30.0% | |
| ! | TTTACAGAATTGAGTTGCAA+GGG | + | chr8_2:33301263-33301282 | None:intergenic | 30.0% |
| ! | ATATGATTCTGAGTTTTCCT+TGG | + | chr8_2:33301517-33301536 | None:intergenic | 30.0% |
| ! | TTTAGGAAGTGACTTTTGAT+TGG | + | chr8_2:33301544-33301563 | None:intergenic | 30.0% |
| CCTACATACATAAACATTGT+GGG | + | chr8_2:33301849-33301868 | None:intergenic | 30.0% | |
| ACCTACATACATAAACATTG+TGG | + | chr8_2:33301850-33301869 | None:intergenic | 30.0% | |
| GATATATGAGAAGAATCCTA+TGG | - | chr8_2:33301892-33301911 | Msa1244630:intron | 30.0% | |
| ACAGAATTGATAGAGTCATA+AGG | + | chr8_2:33302039-33302058 | None:intergenic | 30.0% | |
| !! | TCATTCCATGTTTCTAGAAT+TGG | - | chr8_2:33302109-33302128 | Msa1244630:intron | 30.0% |
| GCATATGAAAATTCACCATT+TGG | + | chr8_2:33302302-33302321 | None:intergenic | 30.0% | |
| ! | TGGTGAATTTTCATATGCAT+TGG | - | chr8_2:33302304-33302323 | Msa1244630:CDS | 30.0% |
| ! | GGTGAATTTTCATATGCATT+GGG | - | chr8_2:33302305-33302324 | Msa1244630:CDS | 30.0% |
| CTAAATCTTTCTTCCAAGTT+TGG | + | chr8_2:33302431-33302450 | None:intergenic | 30.0% | |
| CTTCATTTATCATAGGCATA+AGG | + | chr8_2:33302788-33302807 | None:intergenic | 30.0% | |
| ATAATGAAAGTTCTTCATGC+TGG | - | chr8_2:33302936-33302955 | Msa1244630:CDS | 30.0% | |
| !! | GAAGATGATTTTGAAGACTT+TGG | + | chr8_2:33303068-33303087 | None:intergenic | 30.0% |
| ! | TCTAAAATGTTTGGTTTCCT+TGG | - | chr8_2:33303093-33303112 | Msa1244630:CDS | 30.0% |
| TAATGAAATCAGCAACAGAG+AGG | + | chr8_2:33299430-33299449 | None:intergenic | 35.0% | |
| AGCTATTGTTGAATCTGAAG+AGG | - | chr8_2:33299454-33299473 | Msa1244630:CDS | 35.0% | |
| TTCCACTGTTGCATCAAAAA+CGG | - | chr8_2:33299674-33299693 | Msa1244630:intron | 35.0% | |
| TCACTTGTGCACCATAAAAT+TGG | - | chr8_2:33299797-33299816 | Msa1244630:intron | 35.0% | |
| ACATAAATTGTAAACGGGTC+GGG | - | chr8_2:33299826-33299845 | Msa1244630:intron | 35.0% | |
| AAGCAAGCATGGCTTATAAT+TGG | + | chr8_2:33299875-33299894 | None:intergenic | 35.0% | |
| TTCCTATCACCTAACAGATA+AGG | + | chr8_2:33300004-33300023 | None:intergenic | 35.0% | |
| TCAATCAATTTCATCACTGG+GGG | + | chr8_2:33300044-33300063 | None:intergenic | 35.0% | |
| CTCAATCAATTTCATCACTG+GGG | + | chr8_2:33300045-33300064 | None:intergenic | 35.0% | |
| ! | AAATGTTGCATCAGAAGTGT+CGG | + | chr8_2:33300081-33300100 | None:intergenic | 35.0% |
| AGAGGTTGTAATCTTAACCT+TGG | - | chr8_2:33300123-33300142 | Msa1244630:intron | 35.0% | |
| TAATCATACAAAGTGGAGGA+TGG | + | chr8_2:33300151-33300170 | None:intergenic | 35.0% | |
| AGTAACAACAGGAATGTATG+TGG | + | chr8_2:33300252-33300271 | None:intergenic | 35.0% | |
| TGTTACCTATGTTGGTATGA+TGG | - | chr8_2:33300286-33300305 | Msa1244630:intron | 35.0% | |
| ATCTTCCATCATACCAACAT+AGG | + | chr8_2:33300294-33300313 | None:intergenic | 35.0% | |
| GGGAGGTTATTGAAATTTCT+TGG | + | chr8_2:33300476-33300495 | None:intergenic | 35.0% | |
| TTTAGCAGTTTGGGAAAGAA+GGG | + | chr8_2:33300497-33300516 | None:intergenic | 35.0% | |
| ! | TTTTAGCAGTTTGGGAAAGA+AGG | + | chr8_2:33300498-33300517 | None:intergenic | 35.0% |
| !!! | AGGGGTTATTTTAGCAGTTT+GGG | + | chr8_2:33300506-33300525 | None:intergenic | 35.0% |
| !!! | AAGGGGTTATTTTAGCAGTT+TGG | + | chr8_2:33300507-33300526 | None:intergenic | 35.0% |
| CGTTGAATATTCTCTCCATA+TGG | - | chr8_2:33300598-33300617 | Msa1244630:intron | 35.0% | |
| AGCATAGGTCAGAATTCAAT+AGG | + | chr8_2:33300628-33300647 | None:intergenic | 35.0% | |
| GCATCACATCAATCTCAAAA+TGG | - | chr8_2:33300797-33300816 | Msa1244630:intron | 35.0% | |
| !! | TCAAAGATTTTGAGAGCTTC+AGG | - | chr8_2:33300875-33300894 | Msa1244630:intron | 35.0% |
| AACCATTGAAGGCTTTCATT+GGG | + | chr8_2:33300903-33300922 | None:intergenic | 35.0% | |
| AAACCATTGAAGGCTTTCAT+TGG | + | chr8_2:33300904-33300923 | None:intergenic | 35.0% | |
| GTGAAGAAAAAGATGATTCC+TGG | + | chr8_2:33301103-33301122 | None:intergenic | 35.0% | |
| ! | CTTTTTCTTCACTATGATCG+CGG | - | chr8_2:33301111-33301130 | Msa1244630:intron | 35.0% |
| ! | TTTTTCTTCACTATGATCGC+GGG | - | chr8_2:33301112-33301131 | Msa1244630:intron | 35.0% |
| ! | CAAAGGTACGATAGAAAATC+AGG | + | chr8_2:33301195-33301214 | None:intergenic | 35.0% |
| ! | GATTTTCTATCGTACCTTTG+TGG | - | chr8_2:33301195-33301214 | Msa1244630:intron | 35.0% |
| ! | GTTTACAGAATTGAGTTGCA+AGG | + | chr8_2:33301264-33301283 | None:intergenic | 35.0% |
| !! | GGGTTTTCAAGGAATTGAAA+GGG | + | chr8_2:33301308-33301327 | None:intergenic | 35.0% |
| ACTTTGTTACATAGCCTGTT+GGG | + | chr8_2:33301422-33301441 | None:intergenic | 35.0% | |
| AACTTTGTTACATAGCCTGT+TGG | + | chr8_2:33301423-33301442 | None:intergenic | 35.0% | |
| GGCTATGTAACAAAGTTAAC+TGG | - | chr8_2:33301426-33301445 | Msa1244630:intron | 35.0% | |
| ! | ATTCTGAGTTTTCCTTGGAA+GGG | + | chr8_2:33301512-33301531 | None:intergenic | 35.0% |
| CAGCTTGGATGAAACAATTT+AGG | + | chr8_2:33301561-33301580 | None:intergenic | 35.0% | |
| ATATCCTAAATCCAGGACAT+AGG | - | chr8_2:33301600-33301619 | Msa1244630:intron | 35.0% | |
| ATGAAGGGGGAAAGATTAAA+GGG | + | chr8_2:33301678-33301697 | None:intergenic | 35.0% | |
| ACACTATTCAAAGATGAAGG+GGG | + | chr8_2:33301691-33301710 | None:intergenic | 35.0% | |
| CACACTATTCAAAGATGAAG+GGG | + | chr8_2:33301692-33301711 | None:intergenic | 35.0% | |
| CCACACTATTCAAAGATGAA+GGG | + | chr8_2:33301693-33301712 | None:intergenic | 35.0% | |
| ACCACACTATTCAAAGATGA+AGG | + | chr8_2:33301694-33301713 | None:intergenic | 35.0% | |
| TATTCAAGGACGAAGAAAGT+GGG | + | chr8_2:33301735-33301754 | None:intergenic | 35.0% | |
| ATGTGGGTCAGAATTGTAAT+AGG | + | chr8_2:33301776-33301795 | None:intergenic | 35.0% | |
| ACATACATAAACATTGTGGG+TGG | + | chr8_2:33301846-33301865 | None:intergenic | 35.0% | |
| CCCACAATGTTTATGTATGT+AGG | - | chr8_2:33301846-33301865 | Msa1244630:intron | 35.0% | |
| !! | GAATCCTATGGTTTTGCATA+TGG | - | chr8_2:33301904-33301923 | Msa1244630:intron | 35.0% |
| TTGTCCATATGCAAAACCAT+AGG | + | chr8_2:33301911-33301930 | None:intergenic | 35.0% | |
| GGTAAAAGAGTGATGCATTT+CGG | + | chr8_2:33302018-33302037 | None:intergenic | 35.0% | |
| ! | AGTGACCAATTCTAGAAACA+TGG | + | chr8_2:33302117-33302136 | None:intergenic | 35.0% |
| !! | ATGTTTCTAGAATTGGTCAC+TGG | - | chr8_2:33302116-33302135 | Msa1244630:intron | 35.0% |
| GACTAGAAAAACAGAACTAC+AGG | - | chr8_2:33302152-33302171 | Msa1244630:intron | 35.0% | |
| GATTAATCCATTCGAGAATC+TGG | - | chr8_2:33302253-33302272 | Msa1244630:intron | 35.0% | |
| !! | AGAATCTGGAGAGCATTTAA+GGG | - | chr8_2:33302267-33302286 | Msa1244630:intron | 35.0% |
| ! | TCCTAGAAGCACATAATAAG+TGG | - | chr8_2:33302401-33302420 | Msa1244630:intron | 35.0% |
| ! | CCTAGAAGCACATAATAAGT+GGG | - | chr8_2:33302402-33302421 | Msa1244630:intron | 35.0% |
| AAAGAGGATATGCAGGTTAA+AGG | + | chr8_2:33302591-33302610 | None:intergenic | 35.0% | |
| TTTAACCTGCATATCCTCTT+TGG | - | chr8_2:33302590-33302609 | Msa1244630:intron | 35.0% | |
| GGAAAAGAAGAAAACCAAAG+AGG | + | chr8_2:33302607-33302626 | None:intergenic | 35.0% | |
| !!! | TTTGGTTTTCTTCTTTTCCC+TGG | - | chr8_2:33302608-33302627 | Msa1244630:intron | 35.0% |
| ATGAAACAGAAGAATCTCAG+AGG | + | chr8_2:33302635-33302654 | None:intergenic | 35.0% | |
| TCTTCTTATTCAAGACAGCT+AGG | - | chr8_2:33302655-33302674 | Msa1244630:intron | 35.0% | |
| TTCAATATGTATTGCAGGCT+TGG | - | chr8_2:33302711-33302730 | Msa1244630:intron | 35.0% | |
| TATGAAGCCTGAATAATCCT+GGG | + | chr8_2:33302754-33302773 | None:intergenic | 35.0% | |
| AACCAAAGAGGATATTGACA+CGG | - | chr8_2:33302836-33302855 | Msa1244630:intron | 35.0% | |
| GTGAATATTTATTGTCCCCA+AGG | + | chr8_2:33302962-33302981 | None:intergenic | 35.0% | |
| CAACATACTGTACAAGTAGA+GGG | + | chr8_2:33302989-33303008 | None:intergenic | 35.0% | |
| TCAACATACTGTACAAGTAG+AGG | + | chr8_2:33302990-33303009 | None:intergenic | 35.0% | |
| !! | CTTCTCGTCTCTAAAATGTT+TGG | - | chr8_2:33303084-33303103 | Msa1244630:CDS | 35.0% |
| CTTGAGAGTTGACATCTAGA+AGG | + | chr8_2:33299283-33299302 | None:intergenic | 40.0% | |
| GGAAGAAGAAATGGAAGAAG+AGG | + | chr8_2:33299318-33299337 | None:intergenic | 40.0% | |
| !! | ACGGTTGATGGAAGAAGAAA+TGG | + | chr8_2:33299327-33299346 | None:intergenic | 40.0% |
| TTTGGAAACAAGACGGTTGA+TGG | + | chr8_2:33299339-33299358 | None:intergenic | 40.0% | |
| GTTGGGATTTGGAAACAAGA+CGG | + | chr8_2:33299346-33299365 | None:intergenic | 40.0% | |
| AGATTGAGAGAGTTGGGATT+TGG | + | chr8_2:33299357-33299376 | None:intergenic | 40.0% | |
| !! | TGCCAAGTCTTCTGCTATTT+TGG | - | chr8_2:33299511-33299530 | Msa1244630:CDS | 40.0% |
| AGCCAAAATAGCAGAAGACT+TGG | + | chr8_2:33299516-33299535 | None:intergenic | 40.0% | |
| AGCTAAACGAGTGATAGAGA+TGG | + | chr8_2:33299552-33299571 | None:intergenic | 40.0% | |
| ! | GTTTAGCTTCTTCTACCACA+AGG | - | chr8_2:33299564-33299583 | Msa1244630:CDS | 40.0% |
| !! | TACCGTTTTTGATGCAACAG+TGG | + | chr8_2:33299679-33299698 | None:intergenic | 40.0% |
| CATAAATTGTAAACGGGTCG+GGG | - | chr8_2:33299827-33299846 | Msa1244630:intron | 40.0% | |
| !! | TGTTTGGTGCCTTATCTGTT+AGG | - | chr8_2:33299992-33300011 | Msa1244630:intron | 40.0% |
| TGCCTTATCTGTTAGGTGAT+AGG | - | chr8_2:33299999-33300018 | Msa1244630:intron | 40.0% | |
| TGTTCTATGGTTTCTGTTGG+TGG | + | chr8_2:33300355-33300374 | None:intergenic | 40.0% | |
| TTAGCAGTTTGGGAAAGAAG+GGG | + | chr8_2:33300496-33300515 | None:intergenic | 40.0% | |
| ATTCAAGGGGAACAGTTAAG+GGG | + | chr8_2:33300524-33300543 | None:intergenic | 40.0% | |
| GATTCAAGGGGAACAGTTAA+GGG | + | chr8_2:33300525-33300544 | None:intergenic | 40.0% | |
| ! | AGAGTACCATACGATTCAAG+GGG | + | chr8_2:33300537-33300556 | None:intergenic | 40.0% |
| !! | GAGAGTACCATACGATTCAA+GGG | + | chr8_2:33300538-33300557 | None:intergenic | 40.0% |
| !! | AGAGAGTACCATACGATTCA+AGG | + | chr8_2:33300539-33300558 | None:intergenic | 40.0% |
| GAATATTCTCTCCATATGGC+AGG | - | chr8_2:33300602-33300621 | Msa1244630:intron | 40.0% | |
| AATTCAATAGGCCTGCCATA+TGG | + | chr8_2:33300616-33300635 | None:intergenic | 40.0% | |
| ! | AAATCCGGAAGTGTAAGTAC+AGG | - | chr8_2:33300827-33300846 | Msa1244630:intron | 40.0% |
| ! | AATCCGGAAGTGTAAGTACA+GGG | - | chr8_2:33300828-33300847 | Msa1244630:intron | 40.0% |
| ATCCCAATGAAAGCCTTCAA+TGG | - | chr8_2:33300898-33300917 | Msa1244630:intron | 40.0% | |
| TAAATACCCCATTCCAGTAG+AGG | + | chr8_2:33301033-33301052 | None:intergenic | 40.0% | |
| ! | ACTGGAATGGGGTATTTATC+TGG | - | chr8_2:33301035-33301054 | Msa1244630:intron | 40.0% |
| TGATTATGGGGAGTTAGACA+AGG | + | chr8_2:33301069-33301088 | None:intergenic | 40.0% | |
| ! | TTTTCTTCACTATGATCGCG+GGG | - | chr8_2:33301113-33301132 | Msa1244630:intron | 40.0% |
| TGTTTGGATCAAGGGATCAT+TGG | + | chr8_2:33301163-33301182 | None:intergenic | 40.0% | |
| TATCGTACCTTTGTGGTGAT+GGG | - | chr8_2:33301202-33301221 | Msa1244630:intron | 40.0% | |
| ATATTGGAGTGGACACTAAC+AGG | - | chr8_2:33301230-33301249 | Msa1244630:intron | 40.0% | |
| !! | GGGGTTTTCAAGGAATTGAA+AGG | + | chr8_2:33301309-33301328 | None:intergenic | 40.0% |
| ! | ACAGTATGAAGGGGTTTTCA+AGG | + | chr8_2:33301319-33301338 | None:intergenic | 40.0% |
| TTTGTTACATAGCCTGTTGG+GGG | + | chr8_2:33301420-33301439 | None:intergenic | 40.0% | |
| CTTTGTTACATAGCCTGTTG+GGG | + | chr8_2:33301421-33301440 | None:intergenic | 40.0% | |
| ! | TCTCTCATTTTCGTAACCCT+CGG | - | chr8_2:33301458-33301477 | Msa1244630:intron | 40.0% |
| ATTACACGGAGTAAATCCGA+GGG | + | chr8_2:33301477-33301496 | None:intergenic | 40.0% | |
| AATTACACGGAGTAAATCCG+AGG | + | chr8_2:33301478-33301497 | None:intergenic | 40.0% | |
| GGAGAGGTGATTGAATTACA+CGG | + | chr8_2:33301491-33301510 | None:intergenic | 40.0% | |
| ! | GATTCTGAGTTTTCCTTGGA+AGG | + | chr8_2:33301513-33301532 | None:intergenic | 40.0% |
| ATTTGATAAAGGGAGCAGCT+TGG | + | chr8_2:33301576-33301595 | None:intergenic | 40.0% | |
| AATGCCTATGTCCTGGATTT+AGG | + | chr8_2:33301607-33301626 | None:intergenic | 40.0% | |
| TTTGTTGAATGCCTATGTCC+TGG | + | chr8_2:33301614-33301633 | None:intergenic | 40.0% | |
| GATGAAGGGGGAAAGATTAA+AGG | + | chr8_2:33301679-33301698 | None:intergenic | 40.0% | |
| CCCTTCATCTTTGAATAGTG+TGG | - | chr8_2:33301690-33301709 | Msa1244630:intron | 40.0% | |
| ATTCAAGGACGAAGAAAGTG+GGG | + | chr8_2:33301734-33301753 | None:intergenic | 40.0% | |
| CTATTCAAGGACGAAGAAAG+TGG | + | chr8_2:33301736-33301755 | None:intergenic | 40.0% | |
| TCACATGGAGAGTCTATTCA+AGG | + | chr8_2:33301749-33301768 | None:intergenic | 40.0% | |
| ATTGTAATAGGCCTGTCACA+TGG | + | chr8_2:33301764-33301783 | None:intergenic | 40.0% | |
| ! | TTGGTCACTGGCACTATTTT+TGG | - | chr8_2:33302128-33302147 | Msa1244630:intron | 40.0% |
| ATCTTTGCAGTTATGCCTAG+AGG | + | chr8_2:33302236-33302255 | None:intergenic | 40.0% | |
| !! | GAGAATCTGGAGAGCATTTA+AGG | - | chr8_2:33302266-33302285 | Msa1244630:intron | 40.0% |
| GAAAATTCACCATTTGGGAG+AGG | + | chr8_2:33302296-33302315 | None:intergenic | 40.0% | |
| !! | CTTGTTTTTCACTGGTTGGA+CGG | + | chr8_2:33302370-33302389 | None:intergenic | 40.0% |
| !! | GTCACTTGTTTTTCACTGGT+TGG | + | chr8_2:33302374-33302393 | None:intergenic | 40.0% |
| ACCAGTGAAAAACAAGTGAC+AGG | - | chr8_2:33302374-33302393 | Msa1244630:intron | 40.0% | |
| CCCACTTATTATGTGCTTCT+AGG | + | chr8_2:33302405-33302424 | None:intergenic | 40.0% | |
| GAAAACCAAAGAGGATATGC+AGG | + | chr8_2:33302598-33302617 | None:intergenic | 40.0% | |
| ! | GCTGGTTCAATATGTATTGC+AGG | - | chr8_2:33302706-33302725 | Msa1244630:intron | 40.0% |
| ATAACCTCCCAGGATTATTC+AGG | - | chr8_2:33302744-33302763 | Msa1244630:intron | 40.0% | |
| CTATGAAGCCTGAATAATCC+TGG | + | chr8_2:33302755-33302774 | None:intergenic | 40.0% | |
| ACCAAAGAGGATATTGACAC+GGG | - | chr8_2:33302837-33302856 | Msa1244630:intron | 40.0% | |
| TATTGACACGGGAATGAAGT+TGG | - | chr8_2:33302848-33302867 | Msa1244630:intron | 40.0% | |
| ATTGACACGGGAATGAAGTT+GGG | - | chr8_2:33302849-33302868 | Msa1244630:CDS | 40.0% | |
| TTGGGTACTAACCATCCAAT+GGG | - | chr8_2:33302867-33302886 | Msa1244630:CDS | 40.0% | |
| !! | TGAAGTCTGCAAGCTCTAAA+GGG | + | chr8_2:33302893-33302912 | None:intergenic | 40.0% |
| ! | ATGAAGTCTGCAAGCTCTAA+AGG | + | chr8_2:33302894-33302913 | None:intergenic | 40.0% |
| TTAGAGCTTGCAGACTTCAT+TGG | - | chr8_2:33302894-33302913 | Msa1244630:CDS | 40.0% | |
| TAGAGCTTGCAGACTTCATT+GGG | - | chr8_2:33302895-33302914 | Msa1244630:CDS | 40.0% | |
| CTTGTACAGTATGTTGATGC+TGG | - | chr8_2:33302993-33303012 | Msa1244630:CDS | 40.0% | |
| CTTGGAAGAAAACGAGGTAT+TGG | - | chr8_2:33303020-33303039 | Msa1244630:CDS | 40.0% | |
| GCTGACAACTTATTCTTCCA+AGG | + | chr8_2:33303113-33303132 | None:intergenic | 40.0% | |
| ACCACACTTGTACTGAACTT+TGG | - | chr8_2:33303133-33303152 | Msa1244630:CDS | 40.0% | |
| CCACACTTGTACTGAACTTT+GGG | - | chr8_2:33303134-33303153 | Msa1244630:CDS | 40.0% | |
| GGTACACTACTGAAATTGAG+TGG | - | chr8_2:33303155-33303174 | Msa1244630:CDS | 40.0% | |
| !! | ATGGCGGATGTGAAGATGAT+CGG | - | chr8_2:33299188-33299207 | Msa1244630:three_prime_UTR | 45.0% |
| AGCAGCAGATTGAGAGAGTT+GGG | + | chr8_2:33299363-33299382 | None:intergenic | 45.0% | |
| AAGCAGCAGATTGAGAGAGT+TGG | + | chr8_2:33299364-33299383 | None:intergenic | 45.0% | |
| ! | TGAGCTTAGCTCAGTTGGTA+TGG | + | chr8_2:33299717-33299736 | None:intergenic | 45.0% |
| ! | GCTGATTCTAGAAGCAAGCA+TGG | + | chr8_2:33299886-33299905 | None:intergenic | 45.0% |
| GAGCTCATGTGATCATGACT+TGG | + | chr8_2:33299908-33299927 | None:intergenic | 45.0% | |
| ! | GATCACATGAGCTCCACTTT+TGG | - | chr8_2:33299914-33299933 | Msa1244630:intron | 45.0% |
| ATCAATTTCATCACTGGGGG+AGG | + | chr8_2:33300041-33300060 | None:intergenic | 45.0% | |
| !! | CCTCTGTGATAGTGCTTTTG+TGG | + | chr8_2:33300108-33300127 | None:intergenic | 45.0% |
| !! | CCACAAAAGCACTATCACAG+AGG | - | chr8_2:33300105-33300124 | Msa1244630:intron | 45.0% |
| CGATTCAAGGGGAACAGTTA+AGG | + | chr8_2:33300526-33300545 | None:intergenic | 45.0% | |
| ACTGTTCCCCTTGAATCGTA+TGG | - | chr8_2:33300528-33300547 | Msa1244630:intron | 45.0% | |
| CGAAAAAGAAAGTGGTCCCA+GGG | + | chr8_2:33300580-33300599 | None:intergenic | 45.0% | |
| ACGAAAAAGAAAGTGGTCCC+AGG | + | chr8_2:33300581-33300600 | None:intergenic | 45.0% | |
| ! | GATGCTTCGAGAAGAGGTAT+GGG | + | chr8_2:33300782-33300801 | None:intergenic | 45.0% |
| TGATGCTTCGAGAAGAGGTA+TGG | + | chr8_2:33300783-33300802 | None:intergenic | 45.0% | |
| TGATGTGATGCTTCGAGAAG+AGG | + | chr8_2:33300788-33300807 | None:intergenic | 45.0% | |
| ! | ATCCGGAAGTGTAAGTACAG+GGG | - | chr8_2:33300829-33300848 | Msa1244630:intron | 45.0% |
| ATCCCCTGTACTTACACTTC+CGG | + | chr8_2:33300834-33300853 | None:intergenic | 45.0% | |
| ! | AAGGGAGTGAGGGGATTTTT+GGG | + | chr8_2:33300976-33300995 | None:intergenic | 45.0% |
| CACAATAACAAGGGAGTGAG+GGG | + | chr8_2:33300985-33301004 | None:intergenic | 45.0% | |
| CCACAATAACAAGGGAGTGA+GGG | + | chr8_2:33300986-33301005 | None:intergenic | 45.0% | |
| GCATGGAGCCACAATAACAA+GGG | + | chr8_2:33300994-33301013 | None:intergenic | 45.0% | |
| TGCATGGAGCCACAATAACA+AGG | + | chr8_2:33300995-33301014 | None:intergenic | 45.0% | |
| CTATCGTACCTTTGTGGTGA+TGG | - | chr8_2:33301201-33301220 | Msa1244630:intron | 45.0% | |
| ! | ATCGTACCTTTGTGGTGATG+GGG | - | chr8_2:33301203-33301222 | Msa1244630:intron | 45.0% |
| CTGTAAACAGAGTCCCTTTG+TGG | - | chr8_2:33301276-33301295 | Msa1244630:intron | 45.0% | |
| GAAAGGGTTACAGCCACAAA+GGG | + | chr8_2:33301292-33301311 | None:intergenic | 45.0% | |
| TGAAAGGGTTACAGCCACAA+AGG | + | chr8_2:33301293-33301312 | None:intergenic | 45.0% | |
| CTGTTGGGAACAGTATGAAG+GGG | + | chr8_2:33301328-33301347 | None:intergenic | 45.0% | |
| GCTGTTGGGAACAGTATGAA+GGG | + | chr8_2:33301329-33301348 | None:intergenic | 45.0% | |
| TGCTGTTGGGAACAGTATGA+AGG | + | chr8_2:33301330-33301349 | None:intergenic | 45.0% | |
| GAGGAACTTCAACTGCTGTT+GGG | + | chr8_2:33301343-33301362 | None:intergenic | 45.0% | |
| AGAGGAACTTCAACTGCTGT+TGG | + | chr8_2:33301344-33301363 | None:intergenic | 45.0% | |
| GCAGTTGAAGTTCCTCTTGA+TGG | - | chr8_2:33301347-33301366 | Msa1244630:intron | 45.0% | |
| ATTGAACAGGGTCCATCAAG+AGG | + | chr8_2:33301362-33301381 | None:intergenic | 45.0% | |
| AGAAGAGCCAGGATTGAACA+GGG | + | chr8_2:33301374-33301393 | None:intergenic | 45.0% | |
| AAGAAGAGCCAGGATTGAAC+AGG | + | chr8_2:33301375-33301394 | None:intergenic | 45.0% | |
| AAGAAGACAGAAGAAGAGCC+AGG | + | chr8_2:33301385-33301404 | None:intergenic | 45.0% | |
| GAATAGACTCTCCATGTGAC+AGG | - | chr8_2:33301750-33301769 | Msa1244630:intron | 45.0% | |
| ! | TAGAGAACCTGCTGTTTGTG+TGG | + | chr8_2:33301819-33301838 | None:intergenic | 45.0% |
| CTAGAAACATGGAATGAGCG+TGG | + | chr8_2:33302106-33302125 | None:intergenic | 45.0% | |
| ATGCTCTCCAGATTCTCGAA+TGG | + | chr8_2:33302263-33302282 | None:intergenic | 45.0% | |
| !! | GCCTGTCACTTGTTTTTCAC+TGG | + | chr8_2:33302378-33302397 | None:intergenic | 45.0% |
| AATAAGTGGGCGACCAAACT+TGG | - | chr8_2:33302415-33302434 | Msa1244630:intron | 45.0% | |
| AGAAGAATCTCAGAGGACCA+GGG | + | chr8_2:33302628-33302647 | None:intergenic | 45.0% | |
| CAAGACAGTAATAACCTCCC+AGG | - | chr8_2:33302734-33302753 | Msa1244630:intron | 45.0% | |
| ATCCTCTTTGGTTGCAACGT+TGG | + | chr8_2:33302829-33302848 | None:intergenic | 45.0% | |
| TCCCGTGTCAATATCCTCTT+TGG | + | chr8_2:33302841-33302860 | None:intergenic | 45.0% | |
| GTTGGGTACTAACCATCCAA+TGG | - | chr8_2:33302866-33302885 | Msa1244630:CDS | 45.0% | |
| ! | AAAGTTCTTCATGCTGGCCT+TGG | - | chr8_2:33302942-33302961 | Msa1244630:CDS | 45.0% |
| !! | AAGTTCTTCATGCTGGCCTT+GGG | - | chr8_2:33302943-33302962 | Msa1244630:CDS | 45.0% |
| TACTGTACAAGTAGAGGGCA+AGG | + | chr8_2:33302984-33303003 | None:intergenic | 45.0% | |
| TATGTTGATGCTGGCAGACT+TGG | - | chr8_2:33303002-33303021 | Msa1244630:CDS | 45.0% | |
| CCCAAAGTTCAGTACAAGTG+TGG | + | chr8_2:33303137-33303156 | None:intergenic | 45.0% | |
| !! | TATTATAGAAAATTTATTAT+GGG | + | chr8_2:33300943-33300962 | None:intergenic | 5.0% |
| GTGAAGATGATCGGCGTGAT+AGG | - | chr8_2:33299197-33299216 | Msa1244630:three_prime_UTR | 50.0% | |
| AAGATGATCGGCGTGATAGG+CGG | - | chr8_2:33299200-33299219 | Msa1244630:three_prime_UTR | 50.0% | |
| TTCTACCACAAGGCCTCAAC+AGG | - | chr8_2:33299574-33299593 | Msa1244630:CDS | 50.0% | |
| GAAGGAACCTGTACCTGTTG+AGG | + | chr8_2:33299590-33299609 | None:intergenic | 50.0% | |
| CAAAGTGGAGGATGGTACCA+AGG | + | chr8_2:33300143-33300162 | None:intergenic | 50.0% | |
| ACCATTTCCTTCTCTCTCCC+TGG | - | chr8_2:33300560-33300579 | Msa1244630:intron | 50.0% | |
| CCATTTCCTTCTCTCTCCCT+GGG | - | chr8_2:33300561-33300580 | Msa1244630:intron | 50.0% | |
| ! | CGATGATAGAGCACCTGTTG+GGG | + | chr8_2:33300660-33300679 | None:intergenic | 50.0% |
| ! | GCGATGATAGAGCACCTGTT+GGG | + | chr8_2:33300661-33300680 | None:intergenic | 50.0% |
| ACAAGGCAGTTTCTGCAGAG+GGG | + | chr8_2:33300684-33300703 | None:intergenic | 50.0% | |
| GACAAGGCAGTTTCTGCAGA+GGG | + | chr8_2:33300685-33300704 | None:intergenic | 50.0% | |
| CAGAAACTGCCTTGTCCTCA+AGG | - | chr8_2:33300689-33300708 | Msa1244630:intron | 50.0% | |
| TGCCTTGTCCTCAAGGCTAA+GGG | - | chr8_2:33300696-33300715 | Msa1244630:intron | 50.0% | |
| !! | TTCCCTTAGCCTTGAGGACA+AGG | + | chr8_2:33300701-33300720 | None:intergenic | 50.0% |
| !! | GTTTGCTTCCCTTAGCCTTG+AGG | + | chr8_2:33300707-33300726 | None:intergenic | 50.0% |
| !!! | AGGGGATTTTTGGGGTTGAC+CGG | + | chr8_2:33300967-33300986 | None:intergenic | 50.0% |
| ! | AGGGAGTGAGGGGATTTTTG+GGG | + | chr8_2:33300975-33300994 | None:intergenic | 50.0% |
| ! | CAAGGGAGTGAGGGGATTTT+TGG | + | chr8_2:33300977-33300996 | None:intergenic | 50.0% |
| !! | CCCTCACTCCCTTGTTATTG+TGG | - | chr8_2:33300983-33301002 | Msa1244630:intron | 50.0% |
| GCCACAATAACAAGGGAGTG+AGG | + | chr8_2:33300987-33301006 | None:intergenic | 50.0% | |
| TGGCTCCATGCAAATCCAAG+AGG | - | chr8_2:33301003-33301022 | Msa1244630:intron | 50.0% | |
| GAGGACCTCTTGGATTTGCA+TGG | + | chr8_2:33301011-33301030 | None:intergenic | 50.0% | |
| AGGTCCTCCTCTACTGGAAT+GGG | - | chr8_2:33301023-33301042 | Msa1244630:intron | 50.0% | |
| ATACCCCATTCCAGTAGAGG+AGG | + | chr8_2:33301030-33301049 | None:intergenic | 50.0% | |
| !! | TCGTACCTTTGTGGTGATGG+GGG | - | chr8_2:33301204-33301223 | Msa1244630:intron | 50.0% |
| ATGTACCCCCATCACCACAA+AGG | + | chr8_2:33301212-33301231 | None:intergenic | 50.0% | |
| !! | GTGGTGATGGGGGTACATAT+TGG | - | chr8_2:33301214-33301233 | Msa1244630:intron | 50.0% |
| ! | GATGGGGGTACATATTGGAG+TGG | - | chr8_2:33301219-33301238 | Msa1244630:intron | 50.0% |
| ! | GAATTGAGTTGCAAGGGTGC+AGG | + | chr8_2:33301257-33301276 | None:intergenic | 50.0% |
| ! | TGATGGACCCTGTTCAATCC+TGG | - | chr8_2:33301364-33301383 | Msa1244630:intron | 50.0% |
| ATAGCCTGTTGGGGGATGTA+GGG | + | chr8_2:33301412-33301431 | None:intergenic | 50.0% | |
| TCAATCACCTCTCCCTTCCA+AGG | - | chr8_2:33301497-33301516 | Msa1244630:intron | 50.0% | |
| ! | GAGTTTTCCTTGGAAGGGAG+AGG | + | chr8_2:33301507-33301526 | None:intergenic | 50.0% |
| TGTGGTAACCTCTCTCTCCT+GGG | - | chr8_2:33301708-33301727 | Msa1244630:intron | 50.0% | |
| TAAGGGTTGCCTCTCCCAAA+TGG | - | chr8_2:33302284-33302303 | Msa1244630:intron | 50.0% | |
| CAGAAGAATCTCAGAGGACC+AGG | + | chr8_2:33302629-33302648 | None:intergenic | 50.0% | |
| GAAGCCTGAATAATCCTGGG+AGG | + | chr8_2:33302751-33302770 | None:intergenic | 50.0% | |
| CACCAACGTTGCAACCAAAG+AGG | - | chr8_2:33302824-33302843 | Msa1244630:intron | 50.0% | |
| GCTTGCAGACTTCATTGGGT+TGG | - | chr8_2:33302899-33302918 | Msa1244630:CDS | 50.0% | |
| !! | AGTTCTTCATGCTGGCCTTG+GGG | - | chr8_2:33302944-33302963 | Msa1244630:CDS | 50.0% |
| GGCAGACTTGGAAGAAAACG+AGG | - | chr8_2:33303014-33303033 | Msa1244630:CDS | 50.0% | |
| GCCATGCATGGCTGTCAGTT+GGG | + | chr8_2:33299249-33299268 | None:intergenic | 55.0% | |
| TGCCATGCATGGCTGTCAGT+TGG | + | chr8_2:33299250-33299269 | None:intergenic | 55.0% | |
| CTGTACCTGTTGAGGCCTTG+TGG | + | chr8_2:33299582-33299601 | None:intergenic | 55.0% | |
| CACAAGGCCTCAACAGGTAC+AGG | - | chr8_2:33299580-33299599 | Msa1244630:CDS | 55.0% | |
| CCTCGTGAGCTTAGCTCAGT+TGG | + | chr8_2:33299722-33299741 | None:intergenic | 55.0% | |
| CCAACTGAGCTAAGCTCACG+AGG | - | chr8_2:33299719-33299738 | Msa1244630:intron | 55.0% | |
| GCAGTTTGGGAAAGAAGGGG+AGG | + | chr8_2:33300493-33300512 | None:intergenic | 55.0% | |
| CCCAGGGAGAGAGAAGGAAA+TGG | + | chr8_2:33300564-33300583 | None:intergenic | 55.0% | |
| TTGGGGAAGGTCGTGAGCAT+AGG | + | chr8_2:33300643-33300662 | None:intergenic | 55.0% | |
| ! | GATAGAGCACCTGTTGGGGA+AGG | + | chr8_2:33300656-33300675 | None:intergenic | 55.0% |
| ! | GGCGATGATAGAGCACCTGT+TGG | + | chr8_2:33300662-33300681 | None:intergenic | 55.0% |
| CAAGGCAGTTTCTGCAGAGG+GGG | + | chr8_2:33300683-33300702 | None:intergenic | 55.0% | |
| GGACAAGGCAGTTTCTGCAG+AGG | + | chr8_2:33300686-33300705 | None:intergenic | 55.0% | |
| CTGCCTTGTCCTCAAGGCTA+AGG | - | chr8_2:33300695-33300714 | Msa1244630:intron | 55.0% | |
| TCCAAGAGGTCCTCCTCTAC+TGG | - | chr8_2:33301017-33301036 | Msa1244630:intron | 55.0% | |
| TCCAGTAGAGGAGGACCTCT+TGG | + | chr8_2:33301021-33301040 | None:intergenic | 55.0% | |
| GAGGTCCTCCTCTACTGGAA+TGG | - | chr8_2:33301022-33301041 | Msa1244630:intron | 55.0% | |
| GGTCCTCCTCTACTGGAATG+GGG | - | chr8_2:33301024-33301043 | Msa1244630:intron | 55.0% | |
| CATAGCCTGTTGGGGGATGT+AGG | + | chr8_2:33301413-33301432 | None:intergenic | 55.0% | |
| GTGTGGTAACCTCTCTCTCC+TGG | - | chr8_2:33301707-33301726 | Msa1244630:intron | 55.0% | |
| GTGGGGCAGGTTGTGAATGT+GGG | + | chr8_2:33301792-33301811 | None:intergenic | 55.0% | |
| ! | TGCTGTTTGTGTGGCCTGGT+GGG | + | chr8_2:33301810-33301829 | None:intergenic | 55.0% |
| ! | AACCTGCTGTTTGTGTGGCC+TGG | + | chr8_2:33301814-33301833 | None:intergenic | 55.0% |
| !! | GCTCTAAAGGGCCCATTGGA+TGG | + | chr8_2:33302881-33302900 | None:intergenic | 55.0% |
| !! | GCAAGCTCTAAAGGGCCCAT+TGG | + | chr8_2:33302885-33302904 | None:intergenic | 55.0% |
| ATGATCGGCGTGATAGGCGG+TGG | - | chr8_2:33299203-33299222 | Msa1244630:three_prime_UTR | 60.0% | |
| TGATCGGCGTGATAGGCGGT+GGG | - | chr8_2:33299204-33299223 | Msa1244630:three_prime_UTR | 60.0% | |
| GTGATAGGCGGTGGGCAGAT+GGG | - | chr8_2:33299212-33299231 | Msa1244630:three_prime_UTR | 60.0% | |
| GCCCAACTGACAGCCATGCA+TGG | - | chr8_2:33299245-33299264 | Msa1244630:three_prime_UTR | 60.0% | |
| GCAGACGTCGATGCCATGCA+TGG | + | chr8_2:33299261-33299280 | None:intergenic | 60.0% | |
| AGTGGTCCCAGGGAGAGAGA+AGG | + | chr8_2:33300570-33300589 | None:intergenic | 60.0% | |
| TGCTCACGACCTTCCCCAAC+AGG | - | chr8_2:33300644-33300663 | Msa1244630:intron | 60.0% | |
| CGATCCCTACATCCCCCAAC+AGG | - | chr8_2:33301405-33301424 | Msa1244630:intron | 60.0% | |
| GGTGGGGCAGGTTGTGAATG+TGG | + | chr8_2:33301793-33301812 | None:intergenic | 60.0% | |
| CATTCACAACCTGCCCCACC+AGG | - | chr8_2:33301793-33301812 | Msa1244630:intron | 60.0% | |
| GCTGTTTGTGTGGCCTGGTG+GGG | + | chr8_2:33301809-33301828 | None:intergenic | 60.0% | |
| ! | CTGCTGTTTGTGTGGCCTGG+TGG | + | chr8_2:33301811-33301830 | None:intergenic | 60.0% |
| CACCAGGCCACACAAACAGC+AGG | - | chr8_2:33301809-33301828 | Msa1244630:intron | 60.0% | |
| CGTGATAGGCGGTGGGCAGA+TGG | - | chr8_2:33299211-33299230 | Msa1244630:three_prime_UTR | 65.0% | |
| AAGTGGGGCCCAGGAGAGAG+AGG | + | chr8_2:33301719-33301738 | None:intergenic | 65.0% | |
| GGACGAAGAAAGTGGGGCCC+AGG | + | chr8_2:33301728-33301747 | None:intergenic | 65.0% | |
| TTTGTGTGGCCTGGTGGGGC+AGG | + | chr8_2:33301805-33301824 | None:intergenic | 65.0% | |
| GGCGGTGGGCAGATGGGATC+AGG | - | chr8_2:33299218-33299237 | Msa1244630:three_prime_UTR | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 33299188 | 33303224 | 33299188 | ID=Msa1244630;Name=Msa1244630 |
| chr8_2 | mRNA | 33299188 | 33303224 | 33299188 | ID=Msa1244630-mRNA-1;Parent=Msa1244630;Name=Msa1244630-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0.5|0.33|1|1|1|3|127|283 |
| chr8_2 | exon | 33299188 | 33299684 | 33299188 | ID=Msa1244630-mRNA-1:exon:10784;Parent=Msa1244630-mRNA-1 |
| chr8_2 | exon | 33302286 | 33302391 | 33302286 | ID=Msa1244630-mRNA-1:exon:10783;Parent=Msa1244630-mRNA-1 |
| chr8_2 | exon | 33302849 | 33303224 | 33302849 | ID=Msa1244630-mRNA-1:exon:10782;Parent=Msa1244630-mRNA-1 |
| chr8_2 | CDS | 33302849 | 33303224 | 33302849 | ID=Msa1244630-mRNA-1:cds;Parent=Msa1244630-mRNA-1 |
| chr8_2 | CDS | 33302286 | 33302391 | 33302286 | ID=Msa1244630-mRNA-1:cds;Parent=Msa1244630-mRNA-1 |
| chr8_2 | CDS | 33299315 | 33299684 | 33299315 | ID=Msa1244630-mRNA-1:cds;Parent=Msa1244630-mRNA-1 |
| chr8_2 | three_prime_UTR | 33299188 | 33299314 | 33299188 | ID=Msa1244630-mRNA-1:three_prime_utr;Parent=Msa1244630-mRNA-1 |
| Gene Sequence |
| Protein sequence |
