Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1247520 | XP_016736213.1 | 100.000 | 152 | 0 | 0 | 1 | 152 | 27 | 178 | 1.03e-109 | 319 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1247520 | sp|P42745|UBC2_ARATH | 97.368 | 152 | 4 | 0 | 1 | 152 | 1 | 152 | 1.87e-110 | 313 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1247520 | A0A1U8NE34 | 100.000 | 152 | 0 | 0 | 1 | 152 | 27 | 178 | 4.92e-110 | 319 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa1061020 | Msa1247520 | 0.807322 | 5.349825e-50 | -8.615850e-47 |
Msa1061060 | Msa1247520 | 0.830889 | 2.277617e-55 | -8.615850e-47 |
Msa1192130 | Msa1247520 | 0.986623 | 2.064684e-167 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1247520 | MtrunA17_Chr8g0362321 | 100.000 | 152 | 0 | 0 | 1 | 152 | 1 | 152 | 3.05e-113 | 317 |
Msa1247520 | MtrunA17_Chr4g0060351 | 97.368 | 152 | 4 | 0 | 1 | 152 | 1 | 152 | 1.53e-111 | 313 |
Msa1247520 | MtrunA17_Chr7g0275361 | 45.890 | 146 | 74 | 1 | 5 | 150 | 2 | 142 | 1.45e-45 | 145 |
Msa1247520 | MtrunA17_Chr1g0154011 | 46.575 | 146 | 73 | 1 | 5 | 150 | 2 | 142 | 1.97e-45 | 145 |
Msa1247520 | MtrunA17_Chr5g0432831 | 45.205 | 146 | 75 | 1 | 5 | 150 | 2 | 142 | 4.14e-45 | 144 |
Msa1247520 | MtrunA17_Chr3g0108261 | 45.205 | 146 | 75 | 1 | 5 | 150 | 2 | 142 | 4.77e-45 | 144 |
Msa1247520 | MtrunA17_Chr8g0369311 | 46.575 | 146 | 73 | 1 | 5 | 150 | 58 | 198 | 2.28e-44 | 144 |
Msa1247520 | MtrunA17_Chr4g0037011 | 45.205 | 146 | 75 | 1 | 5 | 150 | 2 | 142 | 2.86e-44 | 142 |
Msa1247520 | MtrunA17_Chr4g0038891 | 46.154 | 143 | 76 | 1 | 2 | 144 | 30 | 171 | 2.27e-40 | 133 |
Msa1247520 | MtrunA17_Chr5g0396451 | 44.928 | 138 | 75 | 1 | 7 | 144 | 35 | 171 | 1.61e-38 | 129 |
Msa1247520 | MtrunA17_Chr4g0053191 | 42.208 | 154 | 82 | 2 | 1 | 147 | 1 | 154 | 2.47e-38 | 127 |
Msa1247520 | MtrunA17_Chr2g0316201 | 40.146 | 137 | 82 | 0 | 7 | 143 | 8 | 144 | 2.84e-38 | 127 |
Msa1247520 | MtrunA17_Chr5g0401831 | 41.558 | 154 | 83 | 2 | 1 | 147 | 1 | 154 | 5.29e-38 | 127 |
Msa1247520 | MtrunA17_Chr2g0316211 | 41.085 | 129 | 76 | 0 | 8 | 136 | 9 | 137 | 3.75e-37 | 124 |
Msa1247520 | MtrunA17_Chr4g0031181 | 39.310 | 145 | 74 | 2 | 18 | 148 | 18 | 162 | 6.86e-35 | 119 |
Msa1247520 | MtrunA17_Chr3g0139901 | 38.732 | 142 | 83 | 3 | 5 | 142 | 4 | 145 | 1.28e-33 | 115 |
Msa1247520 | MtrunA17_Chr1g0199951 | 41.259 | 143 | 82 | 2 | 2 | 143 | 39 | 180 | 1.50e-32 | 114 |
Msa1247520 | MtrunA17_Chr2g0328001 | 36.496 | 137 | 74 | 1 | 25 | 148 | 26 | 162 | 5.12e-31 | 109 |
Msa1247520 | MtrunA17_Chr7g0254701 | 35.294 | 136 | 88 | 0 | 7 | 142 | 13 | 148 | 2.20e-29 | 108 |
Msa1247520 | MtrunA17_Chr8g0378601 | 34.848 | 132 | 86 | 0 | 7 | 138 | 25 | 156 | 4.01e-28 | 102 |
Msa1247520 | MtrunA17_Chr3g0131871 | 34.507 | 142 | 84 | 2 | 10 | 142 | 1 | 142 | 1.32e-26 | 99.0 |
Msa1247520 | MtrunA17_Chr8g0348701 | 30.201 | 149 | 98 | 3 | 1 | 147 | 1 | 145 | 1.35e-25 | 96.3 |
Msa1247520 | MtrunA17_Chr4g0059291 | 29.530 | 149 | 99 | 3 | 1 | 147 | 1 | 145 | 4.64e-25 | 94.7 |
Msa1247520 | MtrunA17_Chr8g0387131 | 32.000 | 150 | 94 | 4 | 1 | 147 | 1 | 145 | 2.15e-23 | 90.5 |
Msa1247520 | MtrunA17_Chr5g0403591 | 26.389 | 144 | 105 | 1 | 8 | 151 | 33 | 175 | 1.89e-20 | 82.8 |
Msa1247520 | MtrunA17_Chr8g0376111 | 32.857 | 140 | 82 | 4 | 7 | 134 | 43 | 182 | 5.18e-18 | 79.0 |
Msa1247520 | MtrunA17_Chr4g0045101 | 33.784 | 148 | 85 | 5 | 7 | 141 | 37 | 184 | 2.60e-17 | 77.0 |
Msa1247520 | MtrunA17_Chr7g0233611 | 33.571 | 140 | 81 | 4 | 7 | 134 | 38 | 177 | 2.84e-17 | 77.0 |
Msa1247520 | MtrunA17_Chr8g0372391 | 36.792 | 106 | 65 | 2 | 1 | 105 | 12 | 116 | 6.84e-17 | 73.2 |
Msa1247520 | MtrunA17_Chr7g0233631 | 31.410 | 156 | 89 | 5 | 7 | 150 | 38 | 187 | 7.03e-17 | 75.9 |
Msa1247520 | MtrunA17_Chr8g0345331 | 31.092 | 119 | 73 | 3 | 7 | 120 | 8 | 122 | 6.37e-16 | 72.0 |
Msa1247520 | MtrunA17_Chr5g0404931 | 35.849 | 106 | 66 | 2 | 1 | 105 | 12 | 116 | 8.39e-16 | 70.1 |
Msa1247520 | MtrunA17_Chr1g0198021 | 31.973 | 147 | 86 | 6 | 7 | 139 | 138 | 284 | 2.28e-12 | 63.2 |
Msa1247520 | MtrunA17_Chr4g0068301 | 29.457 | 129 | 81 | 4 | 1 | 124 | 7 | 130 | 3.90e-12 | 62.4 |
Msa1247520 | MtrunA17_Chr8g0376201 | 30.137 | 146 | 88 | 5 | 7 | 138 | 193 | 338 | 1.80e-11 | 60.8 |
Msa1247520 | MtrunA17_Chr2g0317631 | 31.250 | 128 | 76 | 5 | 7 | 122 | 307 | 434 | 3.08e-11 | 60.1 |
Msa1247520 | MtrunA17_Chr2g0282211 | 29.268 | 123 | 75 | 3 | 7 | 118 | 682 | 803 | 3.84e-11 | 60.1 |
Msa1247520 | MtrunA17_Chr7g0222941 | 28.689 | 122 | 77 | 3 | 7 | 118 | 91 | 212 | 5.80e-11 | 58.5 |
Msa1247520 | MtrunA17_Chr1g0211131 | 30.081 | 123 | 74 | 4 | 7 | 118 | 823 | 944 | 6.36e-11 | 59.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1247520 | AT2G02760.1 | 97.368 | 152 | 4 | 0 | 1 | 152 | 1 | 152 | 1.90e-111 | 313 |
Msa1247520 | AT2G02760.2 | 97.368 | 152 | 4 | 0 | 1 | 152 | 1 | 152 | 1.90e-111 | 313 |
Msa1247520 | AT2G02760.4 | 97.368 | 152 | 4 | 0 | 1 | 152 | 1 | 152 | 1.90e-111 | 313 |
Msa1247520 | AT2G02760.3 | 97.368 | 152 | 4 | 0 | 1 | 152 | 1 | 152 | 1.90e-111 | 313 |
Msa1247520 | AT1G14400.1 | 96.053 | 152 | 6 | 0 | 1 | 152 | 1 | 152 | 2.34e-110 | 310 |
Msa1247520 | AT1G14400.2 | 96.053 | 152 | 6 | 0 | 1 | 152 | 1 | 152 | 2.34e-110 | 310 |
Msa1247520 | AT5G62540.1 | 88.000 | 150 | 18 | 0 | 1 | 150 | 1 | 150 | 5.25e-100 | 284 |
Msa1247520 | AT4G27960.1 | 47.101 | 138 | 73 | 0 | 5 | 142 | 2 | 139 | 6.23e-46 | 147 |
Msa1247520 | AT1G64230.2 | 45.205 | 146 | 75 | 1 | 5 | 150 | 2 | 142 | 1.48e-45 | 146 |
Msa1247520 | AT1G64230.1 | 45.205 | 146 | 75 | 1 | 5 | 150 | 2 | 142 | 1.48e-45 | 146 |
Msa1247520 | AT5G53300.2 | 45.890 | 146 | 74 | 1 | 5 | 150 | 2 | 142 | 1.61e-45 | 146 |
Msa1247520 | AT5G53300.4 | 45.890 | 146 | 74 | 1 | 5 | 150 | 2 | 142 | 1.61e-45 | 146 |
Msa1247520 | AT5G53300.1 | 45.890 | 146 | 74 | 1 | 5 | 150 | 2 | 142 | 1.61e-45 | 146 |
Msa1247520 | AT4G27960.2 | 47.101 | 138 | 73 | 0 | 5 | 142 | 32 | 169 | 4.49e-45 | 145 |
Msa1247520 | AT5G41700.5 | 45.652 | 138 | 75 | 0 | 5 | 142 | 2 | 139 | 1.58e-44 | 143 |
Msa1247520 | AT5G41700.2 | 45.652 | 138 | 75 | 0 | 5 | 142 | 2 | 139 | 1.58e-44 | 143 |
Msa1247520 | AT5G41700.1 | 45.652 | 138 | 75 | 0 | 5 | 142 | 2 | 139 | 1.58e-44 | 143 |
Msa1247520 | AT3G08690.2 | 43.836 | 146 | 77 | 1 | 5 | 150 | 2 | 142 | 3.69e-44 | 142 |
Msa1247520 | AT3G08690.1 | 43.836 | 146 | 77 | 1 | 5 | 150 | 2 | 142 | 3.69e-44 | 142 |
Msa1247520 | AT2G16740.1 | 43.151 | 146 | 78 | 1 | 5 | 150 | 2 | 142 | 8.56e-44 | 141 |
Msa1247520 | AT5G56150.1 | 45.205 | 146 | 75 | 1 | 5 | 150 | 2 | 142 | 1.51e-43 | 141 |
Msa1247520 | AT3G08700.2 | 44.898 | 147 | 75 | 2 | 5 | 150 | 2 | 143 | 1.07e-42 | 139 |
Msa1247520 | AT3G08700.1 | 44.898 | 147 | 75 | 2 | 5 | 150 | 2 | 143 | 1.07e-42 | 139 |
Msa1247520 | AT1G64230.3 | 43.871 | 155 | 73 | 3 | 5 | 150 | 2 | 151 | 1.43e-42 | 139 |
Msa1247520 | AT5G41700.4 | 45.324 | 139 | 75 | 1 | 5 | 142 | 2 | 140 | 2.02e-42 | 138 |
Msa1247520 | AT3G20060.1 | 44.138 | 145 | 80 | 1 | 2 | 146 | 34 | 177 | 1.08e-38 | 129 |
Msa1247520 | AT1G16890.2 | 40.146 | 137 | 82 | 0 | 7 | 143 | 8 | 144 | 5.09e-38 | 127 |
Msa1247520 | AT1G78870.2 | 40.146 | 137 | 82 | 0 | 7 | 143 | 8 | 144 | 9.26e-38 | 126 |
Msa1247520 | AT1G50490.1 | 45.714 | 140 | 75 | 1 | 7 | 146 | 38 | 176 | 1.03e-37 | 127 |
Msa1247520 | AT1G64230.5 | 35.106 | 188 | 75 | 2 | 5 | 150 | 2 | 184 | 2.81e-37 | 126 |
Msa1247520 | AT1G64230.4 | 35.106 | 188 | 75 | 2 | 5 | 150 | 2 | 184 | 2.81e-37 | 126 |
Msa1247520 | AT3G20060.2 | 47.581 | 124 | 64 | 1 | 23 | 146 | 10 | 132 | 3.04e-37 | 124 |
Msa1247520 | AT3G57870.1 | 40.000 | 145 | 80 | 2 | 5 | 142 | 6 | 150 | 3.04e-35 | 120 |
Msa1247520 | AT1G16890.3 | 38.356 | 146 | 81 | 1 | 7 | 143 | 8 | 153 | 3.05e-35 | 120 |
Msa1247520 | AT5G59300.1 | 39.416 | 137 | 70 | 1 | 25 | 148 | 26 | 162 | 1.13e-33 | 116 |
Msa1247520 | AT5G41700.3 | 45.283 | 106 | 58 | 0 | 5 | 110 | 2 | 107 | 2.15e-33 | 115 |
Msa1247520 | AT5G53300.3 | 46.535 | 101 | 54 | 0 | 5 | 105 | 2 | 102 | 4.31e-33 | 113 |
Msa1247520 | AT3G46460.1 | 39.416 | 137 | 70 | 1 | 25 | 148 | 26 | 162 | 4.67e-33 | 115 |
Msa1247520 | AT5G25760.1 | 39.130 | 138 | 80 | 3 | 5 | 138 | 4 | 141 | 7.59e-33 | 114 |
Msa1247520 | AT5G25760.2 | 39.130 | 138 | 80 | 3 | 5 | 138 | 4 | 141 | 7.59e-33 | 114 |
Msa1247520 | AT3G55380.1 | 38.686 | 137 | 71 | 1 | 25 | 148 | 27 | 163 | 1.14e-32 | 114 |
Msa1247520 | AT5G56150.2 | 44.444 | 108 | 60 | 0 | 5 | 112 | 2 | 109 | 2.95e-32 | 111 |
Msa1247520 | AT3G13550.1 | 35.766 | 137 | 88 | 0 | 7 | 143 | 39 | 175 | 2.86e-31 | 110 |
Msa1247520 | AT5G05080.2 | 35.294 | 136 | 88 | 0 | 7 | 142 | 13 | 148 | 2.60e-30 | 110 |
Msa1247520 | AT5G05080.3 | 35.294 | 136 | 88 | 0 | 7 | 142 | 13 | 148 | 2.60e-30 | 110 |
Msa1247520 | AT5G05080.1 | 35.294 | 136 | 88 | 0 | 7 | 142 | 13 | 148 | 2.60e-30 | 110 |
Msa1247520 | AT5G05080.4 | 35.294 | 136 | 88 | 0 | 7 | 142 | 13 | 148 | 2.60e-30 | 110 |
Msa1247520 | AT1G36340.2 | 45.217 | 115 | 63 | 0 | 31 | 145 | 34 | 148 | 3.50e-30 | 107 |
Msa1247520 | AT1G36340.1 | 45.217 | 115 | 63 | 0 | 31 | 145 | 34 | 148 | 3.50e-30 | 107 |
Msa1247520 | AT1G16890.1 | 42.593 | 108 | 62 | 0 | 36 | 143 | 4 | 111 | 6.23e-30 | 105 |
Msa1247520 | AT1G78870.3 | 40.952 | 105 | 62 | 0 | 7 | 111 | 8 | 112 | 9.21e-30 | 105 |
Msa1247520 | AT1G78870.4 | 42.593 | 108 | 62 | 0 | 36 | 143 | 4 | 111 | 1.57e-29 | 104 |
Msa1247520 | AT1G78870.1 | 44.118 | 102 | 56 | 1 | 36 | 136 | 4 | 105 | 1.05e-27 | 100 |
Msa1247520 | AT5G50870.1 | 35.211 | 142 | 83 | 2 | 10 | 142 | 1 | 142 | 2.66e-27 | 101 |
Msa1247520 | AT2G46030.5 | 30.872 | 149 | 97 | 3 | 1 | 147 | 1 | 145 | 1.30e-26 | 99.0 |
Msa1247520 | AT2G46030.1 | 30.872 | 149 | 97 | 3 | 1 | 147 | 1 | 145 | 1.30e-26 | 99.0 |
Msa1247520 | AT3G13550.2 | 38.393 | 112 | 69 | 0 | 7 | 118 | 39 | 150 | 1.83e-26 | 98.2 |
Msa1247520 | AT3G46460.3 | 39.823 | 113 | 55 | 1 | 49 | 148 | 8 | 120 | 2.18e-26 | 96.7 |
Msa1247520 | AT3G46460.2 | 39.823 | 113 | 55 | 1 | 49 | 148 | 8 | 120 | 2.18e-26 | 96.7 |
Msa1247520 | AT3G24515.1 | 34.641 | 153 | 87 | 2 | 8 | 147 | 10 | 162 | 4.16e-26 | 102 |
Msa1247520 | AT5G50870.2 | 37.500 | 128 | 71 | 2 | 10 | 128 | 1 | 128 | 8.04e-26 | 97.4 |
Msa1247520 | AT2G46030.3 | 30.872 | 149 | 97 | 3 | 1 | 147 | 73 | 217 | 1.12e-25 | 98.6 |
Msa1247520 | AT1G63800.1 | 34.000 | 150 | 91 | 4 | 1 | 147 | 1 | 145 | 1.38e-25 | 96.7 |
Msa1247520 | AT3G55380.2 | 30.726 | 179 | 76 | 3 | 18 | 148 | 19 | 197 | 2.90e-25 | 96.3 |
Msa1247520 | AT5G41340.1 | 34.000 | 150 | 91 | 4 | 1 | 147 | 1 | 145 | 3.60e-25 | 95.5 |
Msa1247520 | AT2G46030.4 | 33.333 | 120 | 78 | 2 | 30 | 147 | 29 | 148 | 1.36e-24 | 94.0 |
Msa1247520 | AT2G46030.2 | 33.333 | 120 | 78 | 2 | 30 | 147 | 29 | 148 | 1.36e-24 | 94.0 |
Msa1247520 | AT1G63800.2 | 37.037 | 108 | 66 | 2 | 42 | 147 | 23 | 130 | 3.11e-24 | 92.4 |
Msa1247520 | AT3G24515.3 | 38.393 | 112 | 65 | 1 | 40 | 147 | 76 | 187 | 1.24e-22 | 92.8 |
Msa1247520 | AT5G41340.2 | 36.275 | 102 | 63 | 2 | 48 | 147 | 9 | 110 | 6.72e-22 | 86.3 |
Msa1247520 | AT4G36800.2 | 28.472 | 144 | 102 | 1 | 8 | 151 | 34 | 176 | 1.16e-21 | 86.3 |
Msa1247520 | AT4G36800.1 | 28.472 | 144 | 102 | 1 | 8 | 151 | 34 | 176 | 1.16e-21 | 86.3 |
Msa1247520 | AT2G18600.1 | 29.630 | 135 | 94 | 1 | 8 | 142 | 35 | 168 | 1.15e-20 | 84.0 |
Msa1247520 | AT2G18600.2 | 29.630 | 135 | 94 | 1 | 8 | 142 | 35 | 168 | 1.15e-20 | 84.0 |
Msa1247520 | AT2G32790.1 | 32.192 | 146 | 94 | 2 | 1 | 143 | 26 | 169 | 5.16e-19 | 79.3 |
Msa1247520 | AT1G45050.1 | 36.449 | 107 | 66 | 2 | 1 | 106 | 12 | 117 | 3.57e-16 | 71.6 |
Msa1247520 | AT1G75440.1 | 35.849 | 106 | 66 | 2 | 1 | 105 | 12 | 116 | 4.70e-16 | 71.2 |
Msa1247520 | AT4G36410.1 | 33.962 | 106 | 68 | 2 | 1 | 105 | 12 | 116 | 8.98e-16 | 70.5 |
Msa1247520 | AT5G50430.1 | 30.597 | 134 | 81 | 4 | 7 | 135 | 8 | 134 | 1.07e-15 | 72.0 |
Msa1247520 | AT5G50430.2 | 30.597 | 134 | 81 | 4 | 7 | 135 | 8 | 134 | 1.07e-15 | 72.0 |
Msa1247520 | AT5G42990.1 | 34.211 | 114 | 65 | 3 | 2 | 106 | 5 | 117 | 2.82e-15 | 69.3 |
Msa1247520 | AT1G17280.9 | 31.092 | 119 | 73 | 3 | 7 | 120 | 8 | 122 | 3.06e-15 | 70.5 |
Msa1247520 | AT1G17280.7 | 31.092 | 119 | 73 | 3 | 7 | 120 | 8 | 122 | 3.06e-15 | 70.5 |
Msa1247520 | AT1G17280.6 | 31.092 | 119 | 73 | 3 | 7 | 120 | 8 | 122 | 3.06e-15 | 70.5 |
Msa1247520 | AT1G17280.2 | 31.092 | 119 | 73 | 3 | 7 | 120 | 8 | 122 | 3.06e-15 | 70.5 |
Msa1247520 | AT1G17280.5 | 31.092 | 119 | 73 | 3 | 7 | 120 | 8 | 122 | 3.06e-15 | 70.5 |
Msa1247520 | AT1G17280.3 | 31.092 | 119 | 73 | 3 | 7 | 120 | 8 | 122 | 3.06e-15 | 70.5 |
Msa1247520 | AT1G17280.1 | 31.092 | 119 | 73 | 3 | 7 | 120 | 8 | 122 | 3.06e-15 | 70.5 |
Msa1247520 | AT1G17280.8 | 31.092 | 119 | 73 | 3 | 7 | 120 | 8 | 122 | 3.06e-15 | 70.5 |
Msa1247520 | AT1G17280.4 | 27.273 | 121 | 81 | 1 | 7 | 120 | 8 | 128 | 1.89e-14 | 68.6 |
Msa1247520 | AT1G53025.2 | 31.081 | 148 | 81 | 5 | 7 | 133 | 274 | 421 | 8.08e-14 | 68.2 |
Msa1247520 | AT1G53025.1 | 31.081 | 148 | 81 | 5 | 7 | 133 | 274 | 421 | 8.44e-14 | 68.2 |
Msa1247520 | AT3G17000.1 | 28.467 | 137 | 85 | 4 | 4 | 135 | 11 | 139 | 1.87e-12 | 63.5 |
Msa1247520 | AT1G45050.2 | 35.870 | 92 | 57 | 2 | 1 | 91 | 12 | 102 | 5.52e-12 | 59.3 |
Msa1247520 | AT1G53023.1 | 27.703 | 148 | 86 | 4 | 7 | 133 | 60 | 207 | 1.34e-11 | 61.2 |
Msa1247520 | AT2G16920.1 | 30.894 | 123 | 73 | 4 | 7 | 118 | 853 | 974 | 1.50e-11 | 61.6 |
Msa1247520 | AT2G16920.2 | 30.894 | 123 | 73 | 4 | 7 | 118 | 853 | 974 | 1.50e-11 | 61.6 |
Msa1247520 | AT3G15355.1 | 30.075 | 133 | 81 | 4 | 7 | 127 | 335 | 467 | 8.49e-11 | 59.3 |
Find 65 sgRNAs with CRISPR-Local
Find 386 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTTGGAATGCTGTGATATT+TGG | 0.146008 | 8_2:-40677230 | Msa1247520:CDS |
CATAGTTTAATTGACAATTT+TGG | 0.213259 | 8_2:-40671857 | Msa1247520:three_prime_UTR |
ATTGCAGCTACATCATAAAT+TGG | 0.216194 | 8_2:+40673183 | None:intergenic |
CTACTGTGCGCTTTGTTTCT+CGG | 0.256326 | 8_2:-40675796 | Msa1247520:CDS |
TCAGAGTTTGCTGGTGAGTT+TGG | 0.262363 | 8_2:+40672190 | None:intergenic |
CTCATCAGTCTCTTCCTTGC+AGG | 0.282617 | 8_2:+40677323 | None:intergenic |
CGCACAGTAGGTGGTTTATT+AGG | 0.286690 | 8_2:+40675809 | None:intergenic |
CAGAGTTTGCTGGTGAGTTT+GGG | 0.293059 | 8_2:+40672191 | None:intergenic |
AGTCAATGCCATATATATTA+TGG | 0.306640 | 8_2:+40672082 | None:intergenic |
CTGATTAACCATAATATATA+TGG | 0.331305 | 8_2:-40672090 | Msa1247520:exon |
CCATCCCAAGGGGTGTCATC+TGG | 0.350013 | 8_2:+40676859 | None:intergenic |
TCTATGGTTGGCCAATTCTA+TGG | 0.354420 | 8_2:-40671825 | Msa1247520:three_prime_UTR |
AAGCATGATATTGTTGTCTT+GGG | 0.373603 | 8_2:+40677250 | None:intergenic |
GGAGCCCCACTGATGCCAGC+AGG | 0.380768 | 8_2:+40677272 | None:intergenic |
TTTGGAATGCTGTGATATTT+GGG | 0.385954 | 8_2:-40677229 | Msa1247520:intron |
AAAGCATGATATTGTTGTCT+TGG | 0.388504 | 8_2:+40677249 | None:intergenic |
TTTGCTGGTGAGTTTGGGTT+TGG | 0.408010 | 8_2:+40672196 | None:intergenic |
GGCACCTTGCACCATAGAAT+TGG | 0.409586 | 8_2:+40671814 | None:intergenic |
CGAGCAGCTTCAGAGTTTGC+TGG | 0.433504 | 8_2:+40672181 | None:intergenic |
AAGACAACAATATCATGCTT+TGG | 0.448170 | 8_2:-40677247 | Msa1247520:CDS |
TTCTGACTTGCGAGTGGAGA+AGG | 0.451763 | 8_2:+40678091 | None:intergenic |
CCAGGCCAGATGACACCCCT+TGG | 0.470737 | 8_2:-40676864 | Msa1247520:intron |
GAGCCCCACTGATGCCAGCA+GGG | 0.484979 | 8_2:+40677273 | None:intergenic |
TTGCAGCTACATCATAAATT+GGG | 0.485683 | 8_2:+40673184 | None:intergenic |
GCAATTTCAGTTTATGCAGA+TGG | 0.488118 | 8_2:-40673243 | Msa1247520:intron |
TGCAGATGGAAGTATATGCT+TGG | 0.489154 | 8_2:-40673229 | Msa1247520:CDS |
CAGGCCAGATGACACCCCTT+GGG | 0.497653 | 8_2:-40676863 | Msa1247520:CDS |
TGCAATACTTACCTCAATCC+AGG | 0.507869 | 8_2:-40673166 | Msa1247520:intron |
AGCCCCACTGATGCCAGCAG+GGG | 0.528638 | 8_2:+40677274 | None:intergenic |
TCTTCCATGGCGATAGGCTA+AGG | 0.529841 | 8_2:+40678256 | None:intergenic |
TCTATGGTGCAAGGTGCCAT+AGG | 0.533183 | 8_2:-40671809 | Msa1247520:three_prime_UTR |
AAGCAGAAATGTGCACAACA+TGG | 0.540036 | 8_2:+40671929 | None:intergenic |
ATGAATGAAACAAACAATGA+AGG | 0.540307 | 8_2:+40671897 | None:intergenic |
TCAGAGAAATGCTTCTTCCA+TGG | 0.552635 | 8_2:+40678243 | None:intergenic |
AGCAGAAATGTGCACAACAT+GGG | 0.554064 | 8_2:+40671930 | None:intergenic |
CAGCAAACTCTGAAGCTGCT+CGG | 0.561247 | 8_2:-40672180 | Msa1247520:CDS |
AATCACAATTACCTGGATTG+AGG | 0.567420 | 8_2:+40673155 | None:intergenic |
CCAGATGACACCCCTTGGGA+TGG | 0.568099 | 8_2:-40676859 | Msa1247520:CDS |
TGGTTGACCAAGTCTATGGT+TGG | 0.568459 | 8_2:-40671837 | Msa1247520:three_prime_UTR |
CGAGTGGAGAAGGGTGAGAG+AGG | 0.572062 | 8_2:+40678101 | None:intergenic |
CTGCAAGGAAGAGACTGATG+AGG | 0.573399 | 8_2:-40677322 | Msa1247520:CDS |
CTTTCCTTAGCCTATCGCCA+TGG | 0.575576 | 8_2:-40678260 | Msa1247520:five_prime_UTR |
GCAGAAATGTGCACAACATG+GGG | 0.576113 | 8_2:+40671931 | None:intergenic |
CGAGAAACAAAGCGCACAGT+AGG | 0.579371 | 8_2:+40675797 | None:intergenic |
AGTTGTTTATAAAAGTCTGA+TGG | 0.582068 | 8_2:+40672021 | None:intergenic |
GTGAGATTGTTGAGCAGAGT+TGG | 0.584586 | 8_2:-40672117 | Msa1247520:CDS |
TCTGACTTGCGAGTGGAGAA+GGG | 0.587041 | 8_2:+40678092 | None:intergenic |
GCCCCACTGATGCCAGCAGG+GGG | 0.587217 | 8_2:+40677275 | None:intergenic |
ATGATTGTACCTCCATCCCA+AGG | 0.588580 | 8_2:+40676847 | None:intergenic |
GATGACACCCCTTGGGATGG+AGG | 0.591472 | 8_2:-40676856 | Msa1247520:intron |
GAAACAAAGCGCACAGTAGG+TGG | 0.601646 | 8_2:+40675800 | None:intergenic |
TGCAAGGAAGAGACTGATGA+GGG | 0.609529 | 8_2:-40677321 | Msa1247520:CDS |
AATGCTTCTTCCATGGCGAT+AGG | 0.610659 | 8_2:+40678250 | None:intergenic |
AGCAAACACACAGTCAAGCA+AGG | 0.611633 | 8_2:+40671980 | None:intergenic |
AGCATGATATTGTTGTCTTG+GGG | 0.612000 | 8_2:+40677251 | None:intergenic |
GAGAGGTTCTGACTTGCGAG+TGG | 0.617015 | 8_2:+40678085 | None:intergenic |
GAATTGGCCAACCATAGACT+TGG | 0.623183 | 8_2:+40671830 | None:intergenic |
TGATTGTACCTCCATCCCAA+GGG | 0.632728 | 8_2:+40676848 | None:intergenic |
TGAGGATGTCGACTCCTGCA+AGG | 0.645722 | 8_2:-40677337 | Msa1247520:exon |
TTGGCCAATTCTATGGTGCA+AGG | 0.683830 | 8_2:-40671818 | Msa1247520:three_prime_UTR |
AGTGATTAAATGTGAAAACG+CGG | 0.693183 | 8_2:+40678197 | None:intergenic |
ATATGGCATTGACTTGACAA+TGG | 0.699940 | 8_2:-40672073 | Msa1247520:three_prime_UTR |
GATTGTACCTCCATCCCAAG+GGG | 0.713520 | 8_2:+40676849 | None:intergenic |
CAGAAATGTGCACAACATGG+GGG | 0.735128 | 8_2:+40671932 | None:intergenic |
GTTGACGCTTCAGTTCACAG+AGG | 0.785071 | 8_2:-40675837 | Msa1247520:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AGTTTTTCTATTATAAAAAT+AGG | + | chr8_2:40674987-40675006 | None:intergenic | 10.0% |
!!! | TATTTTTATAATAGAAAAAC+TGG | - | chr8_2:40674986-40675005 | Msa1247520:intron | 10.0% |
!! | ATTGAAAAATTTACATATTA+TGG | + | chr8_2:40675029-40675048 | None:intergenic | 10.0% |
!!! | TATTATATCTAAAATTGAAT+TGG | - | chr8_2:40676786-40676805 | Msa1247520:intron | 10.0% |
!! | CTAAATAATTTATGAAATTT+AGG | + | chr8_2:40677559-40677578 | None:intergenic | 10.0% |
!! | CTAAATTTCATAAATTATTT+AGG | - | chr8_2:40677557-40677576 | Msa1247520:intron | 10.0% |
!! | AATACCAACAAAAAAATAAT+AGG | + | chr8_2:40672207-40672226 | None:intergenic | 15.0% |
!!! | TATTTATTTATTTTGGTGTT+TGG | - | chr8_2:40672381-40672400 | Msa1247520:intron | 15.0% |
!!! | GGAAAATAAAATTTGTTATA+TGG | - | chr8_2:40672623-40672642 | Msa1247520:intron | 15.0% |
!! | AAAAAAAAGTTGAAAATCAA+TGG | + | chr8_2:40676152-40676171 | None:intergenic | 15.0% |
!! | TGTATTTAGAGATTATTAAA+CGG | - | chr8_2:40676507-40676526 | Msa1247520:intron | 15.0% |
!! | AAAAAAAAAAAAACTTGATG+TGG | - | chr8_2:40676594-40676613 | Msa1247520:intron | 15.0% |
!! | GTTTAGAAAAAGAATAATTG+TGG | + | chr8_2:40671994-40672013 | None:intergenic | 20.0% |
!!! | TAAGCCTATTATTTTTTTGT+TGG | - | chr8_2:40672200-40672219 | Msa1247520:CDS | 20.0% |
!! | AAAGCATGAAAATATGAAAT+AGG | - | chr8_2:40672404-40672423 | Msa1247520:intron | 20.0% |
!! | GATAATAATTGTTAAGCTTT+AGG | - | chr8_2:40672602-40672621 | Msa1247520:intron | 20.0% |
!!! | TGCTATGTTTTTAAATTTTG+TGG | - | chr8_2:40672723-40672742 | Msa1247520:intron | 20.0% |
!! | AATCAAAAACGAATAGTAAT+CGG | + | chr8_2:40672770-40672789 | None:intergenic | 20.0% |
!! | GCTAAAACCATAAAATAAAT+GGG | + | chr8_2:40673203-40673222 | None:intergenic | 20.0% |
!! | AGCTAAAACCATAAAATAAA+TGG | + | chr8_2:40673204-40673223 | None:intergenic | 20.0% |
!!! | ATTCTAGTATTTTGTTAACT+TGG | - | chr8_2:40673604-40673623 | Msa1247520:intron | 20.0% |
!! | CAAAAAATAATTGATTACGA+TGG | - | chr8_2:40673794-40673813 | Msa1247520:intron | 20.0% |
!!! | TTGTTGATTGTAAAAAATAG+CGG | - | chr8_2:40673850-40673869 | Msa1247520:intron | 20.0% |
!! | TTAGATGAAAATCCAAAATT+TGG | + | chr8_2:40674253-40674272 | None:intergenic | 20.0% |
!!! | AAATTTTGGATTTTCATCTA+AGG | - | chr8_2:40674252-40674271 | Msa1247520:intron | 20.0% |
!! | CTAACAAGTTTAAACAAAAA+CGG | - | chr8_2:40674482-40674501 | Msa1247520:intron | 20.0% |
!!! | ACTTTTTTTTTGTCTTATGT+TGG | - | chr8_2:40676162-40676181 | Msa1247520:intron | 20.0% |
!! | TTTGCTTTATAAAGAGTAAA+TGG | - | chr8_2:40676726-40676745 | Msa1247520:intron | 20.0% |
!! | AATGAAACTATACATATTGA+TGG | + | chr8_2:40677052-40677071 | None:intergenic | 20.0% |
!!! | TTTATACAACCTGATTTTAA+CGG | - | chr8_2:40677301-40677320 | Msa1247520:CDS | 20.0% |
!!! | GGTTGATATAAATTATTTCA+AGG | + | chr8_2:40677802-40677821 | None:intergenic | 20.0% |
!!! | GATATATTCTTGTTTTTCAA+TGG | - | chr8_2:40677875-40677894 | Msa1247520:intron | 20.0% |
!! | CTGATTAACCATAATATATA+TGG | - | chr8_2:40678051-40678070 | Msa1247520:intron | 20.0% |
!!! | CATAGTTTAATTGACAATTT+TGG | - | chr8_2:40678284-40678303 | Msa1247520:five_prime_UTR | 20.0% |
! | AACACCAATAAAATCAACAT+GGG | + | chr8_2:40672172-40672191 | None:intergenic | 25.0% |
! | AAACACCAATAAAATCAACA+TGG | + | chr8_2:40672173-40672192 | None:intergenic | 25.0% |
!!! | ATTTTGTTATGTTTGTGTTG+TGG | - | chr8_2:40672245-40672264 | Msa1247520:intron | 25.0% |
!! | TTTTGTAAAATTTGAGCTTG+TGG | - | chr8_2:40672296-40672315 | Msa1247520:intron | 25.0% |
! | TTTGGATATGGAAAAATTTG+TGG | - | chr8_2:40672552-40672571 | Msa1247520:intron | 25.0% |
!!! | GTTTGCTATTGAATTATTGA+TGG | - | chr8_2:40672576-40672595 | Msa1247520:intron | 25.0% |
!!! | TCGTTTTTGATTTTGATTGT+AGG | - | chr8_2:40672778-40672797 | Msa1247520:intron | 25.0% |
!!! | TTTTTGATTTTGATTGTAGG+TGG | - | chr8_2:40672781-40672800 | Msa1247520:intron | 25.0% |
!!! | GTGTTTTCCCATTTATTTTA+TGG | - | chr8_2:40673193-40673212 | Msa1247520:CDS | 25.0% |
! | TCTTCCTTTATAAACTGAAA+GGG | - | chr8_2:40673321-40673340 | Msa1247520:intron | 25.0% |
! | AAAACCCTTTCAGTTTATAA+AGG | + | chr8_2:40673328-40673347 | None:intergenic | 25.0% |
!! | ATTTATAACTTTCTAGTGTG+CGG | - | chr8_2:40673375-40673394 | Msa1247520:intron | 25.0% |
! | TTAACTGATAAGTATCTAAG+CGG | + | chr8_2:40673495-40673514 | None:intergenic | 25.0% |
! | ATACTTATCAGTTAACTACT+TGG | - | chr8_2:40673500-40673519 | Msa1247520:intron | 25.0% |
! | TACAAAATGTTGTCAACTAA+CGG | + | chr8_2:40673921-40673940 | None:intergenic | 25.0% |
!! | ATTTTGTACTAAATAGCGTA+AGG | - | chr8_2:40673933-40673952 | Msa1247520:intron | 25.0% |
! | TTGTTAAATAGCAGTTATAG+TGG | + | chr8_2:40674001-40674020 | None:intergenic | 25.0% |
!! | TAACTGCTATTTAACAATAC+TGG | - | chr8_2:40674004-40674023 | Msa1247520:intron | 25.0% |
! | TATTGGGACATGATTTAATT+TGG | - | chr8_2:40674034-40674053 | Msa1247520:intron | 25.0% |
!!! | TATTTTAGTTGTTCAGTTTG+TGG | - | chr8_2:40674137-40674156 | Msa1247520:intron | 25.0% |
!! | GTAATTTTGTACTTACTGTT+TGG | + | chr8_2:40674380-40674399 | None:intergenic | 25.0% |
! | TTCTTGACGTATAGTTTATA+TGG | - | chr8_2:40674644-40674663 | Msa1247520:intron | 25.0% |
! | AAAACAATTGTTCTTAAGTC+AGG | - | chr8_2:40674672-40674691 | Msa1247520:intron | 25.0% |
! | AAAACAATTGTTCTTAAGTC+AGG | - | chr8_2:40674672-40674691 | Msa1247520:intron | 25.0% |
! | TTAAATCAGCTATTAGAAAC+TGG | + | chr8_2:40674884-40674903 | None:intergenic | 25.0% |
!! | GTTTCTAATAGCTGATTTAA+CGG | - | chr8_2:40674884-40674903 | Msa1247520:intron | 25.0% |
! | TCCAAAATACTAACTATAAG+GGG | + | chr8_2:40675258-40675277 | None:intergenic | 25.0% |
! | GTCCAAAATACTAACTATAA+GGG | + | chr8_2:40675259-40675278 | None:intergenic | 25.0% |
! | TGTCCAAAATACTAACTATA+AGG | + | chr8_2:40675260-40675279 | None:intergenic | 25.0% |
!!! | TATAGTTAGTATTTTGGACA+CGG | - | chr8_2:40675260-40675279 | Msa1247520:intron | 25.0% |
! | TACAAAATACTAACTGTAAG+GGG | + | chr8_2:40675312-40675331 | None:intergenic | 25.0% |
! | GTACAAAATACTAACTGTAA+GGG | + | chr8_2:40675313-40675332 | None:intergenic | 25.0% |
! | TGTACAAAATACTAACTGTA+AGG | + | chr8_2:40675314-40675333 | None:intergenic | 25.0% |
!! | TACAGTTAGTATTTTGTACA+CGG | - | chr8_2:40675314-40675333 | Msa1247520:intron | 25.0% |
!! | TGTTAACCTATTTTGCATAT+AGG | + | chr8_2:40675569-40675588 | None:intergenic | 25.0% |
! | AAACACTACTAATGAATAGT+GGG | + | chr8_2:40675777-40675796 | None:intergenic | 25.0% |
! | TAAACACTACTAATGAATAG+TGG | + | chr8_2:40675778-40675797 | None:intergenic | 25.0% |
! | TAGGCTACATTACAAAAAAA+AGG | + | chr8_2:40675862-40675881 | None:intergenic | 25.0% |
!!! | TTTTTTGTAATGTAGCCTAT+TGG | - | chr8_2:40675863-40675882 | Msa1247520:intron | 25.0% |
! | AATTAGCAACAATTGAAAGA+TGG | + | chr8_2:40676104-40676123 | None:intergenic | 25.0% |
!! | CTTTCAATTGTTGCTAATTT+TGG | - | chr8_2:40676105-40676124 | Msa1247520:intron | 25.0% |
! | GTTCAAAATCAATCAACAAT+CGG | + | chr8_2:40676210-40676229 | None:intergenic | 25.0% |
! | AAGACAAAAACAAATAACAC+AGG | + | chr8_2:40676232-40676251 | None:intergenic | 25.0% |
! | AATCTTCAAAGTAGAAAACT+TGG | - | chr8_2:40676468-40676487 | Msa1247520:intron | 25.0% |
!! | ACAAACATCAAGTTGTTAAA+TGG | + | chr8_2:40676573-40676592 | None:intergenic | 25.0% |
! | TTTAACTATGTTTGATTCAG+CGG | + | chr8_2:40676643-40676662 | None:intergenic | 25.0% |
! | GTTAAATCTTACCAAATTTG+TGG | - | chr8_2:40676657-40676676 | Msa1247520:intron | 25.0% |
! | TTAATCAAATTCTTGGAATC+TGG | + | chr8_2:40676690-40676709 | None:intergenic | 25.0% |
! | ATTCCAAGAATTTGATTAAG+TGG | - | chr8_2:40676691-40676710 | Msa1247520:intron | 25.0% |
!! | TATCTAAAATTGAATTGGAG+TGG | - | chr8_2:40676791-40676810 | Msa1247520:intron | 25.0% |
!! | TGGATATTTTACAAAATCAG+TGG | - | chr8_2:40676932-40676951 | Msa1247520:intron | 25.0% |
!! | TAAAAGTATATTGGTCTGTT+TGG | - | chr8_2:40677225-40677244 | Msa1247520:intron | 25.0% |
!!! | TCTTGTTTGGTTCATTATTT+TGG | + | chr8_2:40677491-40677510 | None:intergenic | 25.0% |
!!! | TACTTTAAAGCTTTCTTGTT+TGG | + | chr8_2:40677504-40677523 | None:intergenic | 25.0% |
! | TCTAATGAAGAAAAATGAGT+TGG | + | chr8_2:40677716-40677735 | None:intergenic | 25.0% |
!!! | CTTTGTTACTCTGTTTTTTA+AGG | + | chr8_2:40677823-40677842 | None:intergenic | 25.0% |
!!! | ATGTGATGTTTTAGTAACTA+TGG | - | chr8_2:40677853-40677872 | Msa1247520:intron | 25.0% |
! | AGTCAATGCCATATATATTA+TGG | + | chr8_2:40678062-40678081 | None:intergenic | 25.0% |
! | AGTTGTTTATAAAAGTCTGA+TGG | + | chr8_2:40678123-40678142 | None:intergenic | 25.0% |
! | ATGAATGAAACAAACAATGA+AGG | + | chr8_2:40678247-40678266 | None:intergenic | 25.0% |
AGTGATTAAATGTGAAAACG+CGG | + | chr8_2:40671947-40671966 | None:intergenic | 30.0% | |
!!! | CATACCCATGTTGATTTTAT+TGG | - | chr8_2:40672165-40672184 | Msa1247520:CDS | 30.0% |
GATTAGGCTTAATTGATCTT+TGG | - | chr8_2:40672326-40672345 | Msa1247520:intron | 30.0% | |
ACAACTCTATGAATTGTGTT+TGG | - | chr8_2:40672534-40672553 | Msa1247520:intron | 30.0% | |
CTATGAATTGTGTTTGGATA+TGG | - | chr8_2:40672540-40672559 | Msa1247520:intron | 30.0% | |
AAGCATGATATTGTTGTCTT+GGG | + | chr8_2:40672894-40672913 | None:intergenic | 30.0% | |
AAAGCATGATATTGTTGTCT+TGG | + | chr8_2:40672895-40672914 | None:intergenic | 30.0% | |
AAGACAACAATATCATGCTT+TGG | - | chr8_2:40672894-40672913 | Msa1247520:intron | 30.0% | |
! | TTTGGAATGCTGTGATATTT+GGG | - | chr8_2:40672912-40672931 | Msa1247520:intron | 30.0% |
ACATAAAAATTGTTGTGACG+TGG | - | chr8_2:40673034-40673053 | Msa1247520:intron | 30.0% | |
! | TTTTTATGTTGCCTCAATCT+AGG | + | chr8_2:40673060-40673079 | None:intergenic | 30.0% |
ACATAAAAATTGTTGTCACG+TGG | - | chr8_2:40673071-40673090 | Msa1247520:intron | 30.0% | |
AGATAAAAATTGTTGTGACG+TGG | - | chr8_2:40673120-40673139 | Msa1247520:intron | 30.0% | |
CTTTCAGTTTATAAAGGAAG+AGG | + | chr8_2:40673322-40673341 | None:intergenic | 30.0% | |
CTCTTCCTTTATAAACTGAA+AGG | - | chr8_2:40673320-40673339 | Msa1247520:intron | 30.0% | |
GAACAAACTTTGATTCATAG+TGG | - | chr8_2:40673551-40673570 | Msa1247520:intron | 30.0% | |
!! | TATCATTTATCGATTTGCTG+TGG | - | chr8_2:40673632-40673651 | Msa1247520:intron | 30.0% |
TCTAGTATGTGTTAACTACT+TGG | - | chr8_2:40673703-40673722 | Msa1247520:intron | 30.0% | |
GTCATGAATTAACAGATTCT+TGG | - | chr8_2:40673771-40673790 | Msa1247520:intron | 30.0% | |
GGCATTTATTTGTATGTTGT+TGG | - | chr8_2:40673815-40673834 | Msa1247520:intron | 30.0% | |
TCTCAACTTATAGACAGAAA+AGG | - | chr8_2:40674166-40674185 | Msa1247520:intron | 30.0% | |
CTCAACTTATAGACAGAAAA+GGG | - | chr8_2:40674167-40674186 | Msa1247520:intron | 30.0% | |
! | ATTACCTTGCAATTCTTTTC+AGG | - | chr8_2:40674395-40674414 | Msa1247520:intron | 30.0% |
CTAACAAGTTCAAACCAAAA+CGG | - | chr8_2:40674522-40674541 | Msa1247520:intron | 30.0% | |
TAACAAGTTCAAACCAAAAC+GGG | - | chr8_2:40674523-40674542 | Msa1247520:intron | 30.0% | |
!! | CAGCTTTTGAAGAACTTTTT+TGG | - | chr8_2:40674599-40674618 | Msa1247520:intron | 30.0% |
AATTGTTCTTAAGTCAGGTA+TGG | - | chr8_2:40674677-40674696 | Msa1247520:intron | 30.0% | |
AATTGTTCTTAAGTCAGGTT+TGG | - | chr8_2:40674710-40674729 | Msa1247520:intron | 30.0% | |
CTATCTTAGTTTCCCTATTA+GGG | - | chr8_2:40674841-40674860 | Msa1247520:intron | 30.0% | |
GCTATTAGAAACTGGAATAT+CGG | + | chr8_2:40674876-40674895 | None:intergenic | 30.0% | |
! | CGCAAAACAAAGAGAATTTT+AGG | - | chr8_2:40674913-40674932 | Msa1247520:intron | 30.0% |
CATACACATACAAAAGGAAA+TGG | + | chr8_2:40675078-40675097 | None:intergenic | 30.0% | |
AACAATAACAGATAGTGTTG+CGG | + | chr8_2:40675172-40675191 | None:intergenic | 30.0% | |
ATCTGTTATTGTTTACATCG+CGG | - | chr8_2:40675179-40675198 | Msa1247520:intron | 30.0% | |
GGGAAAATAAGTGTTATCAA+TGG | + | chr8_2:40675238-40675257 | None:intergenic | 30.0% | |
! | TCCCCTTATAGTTAGTATTT+TGG | - | chr8_2:40675254-40675273 | Msa1247520:intron | 30.0% |
ATAAATTTGAACGACATTCC+AGG | + | chr8_2:40675343-40675362 | None:intergenic | 30.0% | |
CGTTAACCTATATGCAAAAT+AGG | - | chr8_2:40675560-40675579 | Msa1247520:intron | 30.0% | |
AAGTTTGCAATGAATCCAAT+AGG | - | chr8_2:40675671-40675690 | Msa1247520:intron | 30.0% | |
GAGCATAAGTTCAAAATTGA+CGG | + | chr8_2:40675818-40675837 | None:intergenic | 30.0% | |
!!! | TTATGCTCTTTTTTGCGTTA+TGG | - | chr8_2:40675830-40675849 | Msa1247520:CDS | 30.0% |
! | TTAGTGACTTTGTTTATGCT+GGG | + | chr8_2:40675978-40675997 | None:intergenic | 30.0% |
CATAAACAAAGTCACTAACT+AGG | - | chr8_2:40675980-40675999 | Msa1247520:intron | 30.0% | |
AAGATACTATCTGTGTATTC+TGG | - | chr8_2:40676267-40676286 | Msa1247520:intron | 30.0% | |
! | TATCTAACCCTTCTCTTTTT+GGG | - | chr8_2:40676439-40676458 | Msa1247520:intron | 30.0% |
TCACCACTTAATCAAATTCT+TGG | + | chr8_2:40676697-40676716 | None:intergenic | 30.0% | |
TTAAAGCAAATTACAGCAAC+AGG | + | chr8_2:40676761-40676780 | None:intergenic | 30.0% | |
TTGCAGCTACATCATAAATT+GGG | + | chr8_2:40676960-40676979 | None:intergenic | 30.0% | |
ATTGCAGCTACATCATAAAT+TGG | + | chr8_2:40676961-40676980 | None:intergenic | 30.0% | |
! | TTTTCAGAGTAAAGCAATGA+TGG | + | chr8_2:40677079-40677098 | None:intergenic | 30.0% |
GAATCTAATTATACCACCTA+GGG | + | chr8_2:40677130-40677149 | None:intergenic | 30.0% | |
TGAATCTAATTATACCACCT+AGG | + | chr8_2:40677131-40677150 | None:intergenic | 30.0% | |
AAGAAGAAAGTGAACTGAAA+TGG | + | chr8_2:40677191-40677210 | None:intergenic | 30.0% | |
! | CAGGTCAACTAAAAGTATAT+TGG | - | chr8_2:40677216-40677235 | Msa1247520:intron | 30.0% |
!! | ACTATAAGGAAGGTTTTGAT+CGG | + | chr8_2:40677421-40677440 | None:intergenic | 30.0% |
!!! | TTTGGTTCATTATTTTGGAG+GGG | + | chr8_2:40677486-40677505 | None:intergenic | 30.0% |
!!! | GTTTGGTTCATTATTTTGGA+GGG | + | chr8_2:40677487-40677506 | None:intergenic | 30.0% |
!!! | TGTTTGGTTCATTATTTTGG+AGG | + | chr8_2:40677488-40677507 | None:intergenic | 30.0% |
TAGGTATATAGTGTTCGATT+GGG | + | chr8_2:40677540-40677559 | None:intergenic | 30.0% | |
TTAGGTATATAGTGTTCGAT+TGG | + | chr8_2:40677541-40677560 | None:intergenic | 30.0% | |
GTAATGCTTTATGTTCCATT+AGG | - | chr8_2:40677626-40677645 | Msa1247520:intron | 30.0% | |
AGCATGAACTAATGAAACAA+CGG | + | chr8_2:40677692-40677711 | None:intergenic | 30.0% | |
TGAACAAACATATCACAAGT+TGG | + | chr8_2:40677766-40677785 | None:intergenic | 30.0% | |
TGTGTTGTGGTTAGAAATGA+AGG | - | chr8_2:40672258-40672277 | Msa1247520:intron | 35.0% | |
GTGTTGTGGTTAGAAATGAA+GGG | - | chr8_2:40672259-40672278 | Msa1247520:intron | 35.0% | |
AGCATGATATTGTTGTCTTG+GGG | + | chr8_2:40672893-40672912 | None:intergenic | 35.0% | |
!! | CTTTGGAATGCTGTGATATT+TGG | - | chr8_2:40672911-40672930 | Msa1247520:intron | 35.0% |
AATCACAGTTAAAGCGGAAT+CGG | + | chr8_2:40672997-40673016 | None:intergenic | 35.0% | |
CAACACAATCACAGTTAAAG+CGG | + | chr8_2:40673003-40673022 | None:intergenic | 35.0% | |
CTTTAACTGTGATTGTGTTG+CGG | - | chr8_2:40673003-40673022 | Msa1247520:intron | 35.0% | |
!! | ATTTGTATGTTGTTGGTAGC+AGG | - | chr8_2:40673822-40673841 | Msa1247520:intron | 35.0% |
!! | TTTGTATGTTGTTGGTAGCA+GGG | - | chr8_2:40673823-40673842 | Msa1247520:intron | 35.0% |
TTGTACTAAATAGCGTAAGG+CGG | - | chr8_2:40673936-40673955 | Msa1247520:intron | 35.0% | |
!! | ATAGTGGTGCTATAACATAG+CGG | + | chr8_2:40673985-40674004 | None:intergenic | 35.0% |
!! | ACAATACTGGAAGTGTCTAT+TGG | - | chr8_2:40674017-40674036 | Msa1247520:intron | 35.0% |
!! | CAATACTGGAAGTGTCTATT+GGG | - | chr8_2:40674018-40674037 | Msa1247520:intron | 35.0% |
TACATAAAACACCATGACAC+GGG | + | chr8_2:40674218-40674237 | None:intergenic | 35.0% | |
CTACATAAAACACCATGACA+CGG | + | chr8_2:40674219-40674238 | None:intergenic | 35.0% | |
! | GTACACAGTCTTCCAAATTT+TGG | - | chr8_2:40674238-40674257 | Msa1247520:intron | 35.0% |
!!! | AGGAATGTCTTGCTTTTTTC+AGG | - | chr8_2:40674272-40674291 | Msa1247520:intron | 35.0% |
AACTCCTGAAAAGAATTGCA+AGG | + | chr8_2:40674402-40674421 | None:intergenic | 35.0% | |
! | TTAAGTCAGGTTTGGAACTT+TGG | - | chr8_2:40674718-40674737 | Msa1247520:intron | 35.0% |
GCTATCTTAGTTTCCCTATT+AGG | - | chr8_2:40674840-40674859 | Msa1247520:intron | 35.0% | |
ACACATACAAAAGGAAATGG+TGG | + | chr8_2:40675075-40675094 | None:intergenic | 35.0% | |
ACGTCACATACACATACAAA+AGG | + | chr8_2:40675084-40675103 | None:intergenic | 35.0% | |
ACAATAACAGATAGTGTTGC+GGG | + | chr8_2:40675171-40675190 | None:intergenic | 35.0% | |
! | TTGTTTACATCGCGGATTTT+TGG | - | chr8_2:40675187-40675206 | Msa1247520:intron | 35.0% |
!! | AAAAGAAGTGTCAACATTCC+AGG | + | chr8_2:40675289-40675308 | None:intergenic | 35.0% |
! | ATGCTGAACTTTTGTTAGTG+TGG | - | chr8_2:40675410-40675429 | Msa1247520:intron | 35.0% |
TAGTGTGGTTGTCAAAAACT+TGG | - | chr8_2:40675425-40675444 | Msa1247520:intron | 35.0% | |
AGTGTGGTTGTCAAAAACTT+GGG | - | chr8_2:40675426-40675445 | Msa1247520:intron | 35.0% | |
CGACTCTAGGTATCAAAATT+AGG | - | chr8_2:40675475-40675494 | Msa1247520:intron | 35.0% | |
TAGACGTTTCTGTGTAAACT+CGG | - | chr8_2:40675512-40675531 | Msa1247520:intron | 35.0% | |
TTGTTTATCCTCTGAGCTAT+GGG | + | chr8_2:40675613-40675632 | None:intergenic | 35.0% | |
TTTGTTTATCCTCTGAGCTA+TGG | + | chr8_2:40675614-40675633 | None:intergenic | 35.0% | |
AGTTTCGGTTCATCATAGTT+GGG | + | chr8_2:40675714-40675733 | None:intergenic | 35.0% | |
ATCACAATAGAGCTGAGTTT+CGG | + | chr8_2:40675729-40675748 | None:intergenic | 35.0% | |
! | GTTAGTGACTTTGTTTATGC+TGG | + | chr8_2:40675979-40675998 | None:intergenic | 35.0% |
GTTCATTGCAATCTTGTGAT+GGG | + | chr8_2:40676016-40676035 | None:intergenic | 35.0% | |
ATCTAGGTTTCATCAGAGTT+GGG | + | chr8_2:40676038-40676057 | None:intergenic | 35.0% | |
AGCAACAATTGAAAGATGGT+AGG | + | chr8_2:40676100-40676119 | None:intergenic | 35.0% | |
!!! | TGTTGCTAATTTTGGTCTTG+CGG | - | chr8_2:40676113-40676132 | Msa1247520:intron | 35.0% |
CACAGATAGTATCTTGAGAT+AGG | + | chr8_2:40676262-40676281 | None:intergenic | 35.0% | |
!! | TCTGTGTATTCTGGTTTAGT+CGG | - | chr8_2:40676276-40676295 | Msa1247520:intron | 35.0% |
! | GTATCTAACCCTTCTCTTTT+TGG | - | chr8_2:40676438-40676457 | Msa1247520:intron | 35.0% |
! | ATCTAACCCTTCTCTTTTTG+GGG | - | chr8_2:40676440-40676459 | Msa1247520:intron | 35.0% |
TTCAATCCCCAAAAAGAGAA+GGG | + | chr8_2:40676449-40676468 | None:intergenic | 35.0% | |
TTTCAATCCCCAAAAAGAGA+AGG | + | chr8_2:40676450-40676469 | None:intergenic | 35.0% | |
CTGGCAAATATCCACAAATT+TGG | + | chr8_2:40676671-40676690 | None:intergenic | 35.0% | |
GCAATTTCAGTTTATGCAGA+TGG | - | chr8_2:40676898-40676917 | Msa1247520:intron | 35.0% | |
AATCACAATTACCTGGATTG+AGG | + | chr8_2:40676989-40677008 | None:intergenic | 35.0% | |
TCAAGTGAATCACAATTACC+TGG | + | chr8_2:40676996-40677015 | None:intergenic | 35.0% | |
TTCACTTTCTTCTTTGAGTC+AGG | - | chr8_2:40677197-40677216 | Msa1247520:intron | 35.0% | |
! | TTGGTCTGTTTGGTTCAAAT+AGG | - | chr8_2:40677235-40677254 | Msa1247520:CDS | 35.0% |
! | TGGTCTGTTTGGTTCAAATA+GGG | - | chr8_2:40677236-40677255 | Msa1247520:CDS | 35.0% |
!! | ACAACCTGATTTTAACGGAA+AGG | - | chr8_2:40677306-40677325 | Msa1247520:CDS | 35.0% |
!! | GTTTTGATCGGACAAAAGAA+GGG | + | chr8_2:40677409-40677428 | None:intergenic | 35.0% |
GATCAAAACCTTCCTTATAG+TGG | - | chr8_2:40677420-40677439 | Msa1247520:intron | 35.0% | |
! | AAAACCTTCCTTATAGTGGA+GGG | - | chr8_2:40677424-40677443 | Msa1247520:intron | 35.0% |
AGGTATATAGTGTTCGATTG+GGG | + | chr8_2:40677539-40677558 | None:intergenic | 35.0% | |
! | ATAAAGCATTACTTCCACTG+TGG | + | chr8_2:40677618-40677637 | None:intergenic | 35.0% |
!! | ATATGGCATTGACTTGACAA+TGG | - | chr8_2:40678068-40678087 | Msa1247520:intron | 35.0% |
!!! | ATTTTGGTTGACCAAGTCTA+TGG | - | chr8_2:40678300-40678319 | Msa1247520:five_prime_UTR | 35.0% |
TCAGAGAAATGCTTCTTCCA+TGG | + | chr8_2:40671901-40671920 | None:intergenic | 40.0% | |
TTGAAGAGAGAGAAAGAGAG+AGG | + | chr8_2:40672076-40672095 | None:intergenic | 40.0% | |
TGTGGTTAGAAATGAAGGGT+TGG | - | chr8_2:40672263-40672282 | Msa1247520:intron | 40.0% | |
AGAAATGAAGGGTTGGATCT+AGG | - | chr8_2:40672270-40672289 | Msa1247520:intron | 40.0% | |
AGCTTGTGGTTGTTGTGATT+AGG | - | chr8_2:40672310-40672329 | Msa1247520:intron | 40.0% | |
!!! | GATTTTGATTGTAGGTGGTG+AGG | - | chr8_2:40672786-40672805 | Msa1247520:intron | 40.0% |
! | GACTGATGAGGGATTTTAAG+AGG | - | chr8_2:40672831-40672850 | Msa1247520:intron | 40.0% |
TGCTGTGATATTTGGGTATG+TGG | - | chr8_2:40672919-40672938 | Msa1247520:intron | 40.0% | |
CATTCAACTGCACACACATA+AGG | + | chr8_2:40672971-40672990 | None:intergenic | 40.0% | |
TATGTGTGTCACACAGTAGT+TGG | - | chr8_2:40674105-40674124 | Msa1247520:intron | 40.0% | |
TTGTTTGTACATTGAGTGCC+TGG | - | chr8_2:40674440-40674459 | Msa1247520:intron | 40.0% | |
TGTTTGTACATTGAGTGCCT+GGG | - | chr8_2:40674441-40674460 | Msa1247520:intron | 40.0% | |
! | TTGAAACAGACTTCCCGTTT+TGG | + | chr8_2:40674539-40674558 | None:intergenic | 40.0% |
!! | TTTTCCGTGTTGTCAAGTTG+TGG | - | chr8_2:40674770-40674789 | Msa1247520:intron | 40.0% |
! | CTAAGATAGCATCGCAGTTT+TGG | + | chr8_2:40674830-40674849 | None:intergenic | 40.0% |
GGCAGAATTGCAGAAAATAG+CGG | + | chr8_2:40675217-40675236 | None:intergenic | 40.0% | |
TCATACACGTTTACGACTCT+AGG | - | chr8_2:40675462-40675481 | Msa1247520:intron | 40.0% | |
AGACGTTTCTGTGTAAACTC+GGG | - | chr8_2:40675513-40675532 | Msa1247520:intron | 40.0% | |
ATGAATCCAATAGGCCAACT+TGG | - | chr8_2:40675680-40675699 | Msa1247520:intron | 40.0% | |
GAGTTTCGGTTCATCATAGT+TGG | + | chr8_2:40675715-40675734 | None:intergenic | 40.0% | |
TAGCCTATTGGATTCATTGC+TGG | - | chr8_2:40675875-40675894 | Msa1247520:intron | 40.0% | |
GTTCCAGCAATGAATCCAAT+AGG | + | chr8_2:40675881-40675900 | None:intergenic | 40.0% | |
GATTCATTGCTGGAACAGAA+GGG | - | chr8_2:40675885-40675904 | Msa1247520:intron | 40.0% | |
GGTTCATTGCAATCTTGTGA+TGG | + | chr8_2:40676017-40676036 | None:intergenic | 40.0% | |
GATCTAGGTTTCATCAGAGT+TGG | + | chr8_2:40676039-40676058 | None:intergenic | 40.0% | |
CTGAATCAAGCTCCAATGAA+GGG | - | chr8_2:40676066-40676085 | Msa1247520:intron | 40.0% | |
CAATTGAAAGATGGTAGGCT+TGG | + | chr8_2:40676095-40676114 | None:intergenic | 40.0% | |
!! | CTGTGTATTCTGGTTTAGTC+GGG | - | chr8_2:40676277-40676296 | Msa1247520:intron | 40.0% |
ATAATACCCGCAAACCAGAA+AGG | + | chr8_2:40676309-40676328 | None:intergenic | 40.0% | |
AGAAGGGTTAGATACAAGCA+AGG | + | chr8_2:40676433-40676452 | None:intergenic | 40.0% | |
! | TTTCATTGACCCTTTTCGCT+TGG | - | chr8_2:40676876-40676895 | Msa1247520:intron | 40.0% |
CTGAAATTGCCAAGCGAAAA+GGG | + | chr8_2:40676888-40676907 | None:intergenic | 40.0% | |
ACTGAAATTGCCAAGCGAAA+AGG | + | chr8_2:40676889-40676908 | None:intergenic | 40.0% | |
! | TGCAGATGGAAGTATATGCT+TGG | - | chr8_2:40676912-40676931 | Msa1247520:intron | 40.0% |
TGCAATACTTACCTCAATCC+AGG | - | chr8_2:40676975-40676994 | Msa1247520:intron | 40.0% | |
!!! | AAACTGCCATTTTTCTCCCT+AGG | - | chr8_2:40677111-40677130 | Msa1247520:intron | 40.0% |
ATACCACCTAGGGAGAAAAA+TGG | + | chr8_2:40677120-40677139 | None:intergenic | 40.0% | |
! | GGTCTGTTTGGTTCAAATAG+GGG | - | chr8_2:40677237-40677256 | Msa1247520:CDS | 40.0% |
! | GTCTGTTTGGTTCAAATAGG+GGG | - | chr8_2:40677238-40677257 | Msa1247520:CDS | 40.0% |
GCAACCTTTCCGTTAAAATC+AGG | + | chr8_2:40677313-40677332 | None:intergenic | 40.0% | |
!! | GGTTTTGATCGGACAAAAGA+AGG | + | chr8_2:40677410-40677429 | None:intergenic | 40.0% |
CAAAACCTTCCTTATAGTGG+AGG | - | chr8_2:40677423-40677442 | Msa1247520:intron | 40.0% | |
! | AAACCTTCCTTATAGTGGAG+GGG | - | chr8_2:40677425-40677444 | Msa1247520:intron | 40.0% |
! | AATCCATCCCGACTCAATTT+TGG | + | chr8_2:40677453-40677472 | None:intergenic | 40.0% |
GGTATATAGTGTTCGATTGG+GGG | + | chr8_2:40677538-40677557 | None:intergenic | 40.0% | |
GCACAAACAAGTGTTCCTAA+GGG | - | chr8_2:40677579-40677598 | Msa1247520:intron | 40.0% | |
CACAAACAAGTGTTCCTAAG+GGG | - | chr8_2:40677580-40677599 | Msa1247520:intron | 40.0% | |
ACATGTAGATGACGACCTAA+TGG | + | chr8_2:40677644-40677663 | None:intergenic | 40.0% | |
AGCAGAAATGTGCACAACAT+GGG | + | chr8_2:40678214-40678233 | None:intergenic | 40.0% | |
AAGCAGAAATGTGCACAACA+TGG | + | chr8_2:40678215-40678234 | None:intergenic | 40.0% | |
! | TCTATGGTTGGCCAATTCTA+TGG | - | chr8_2:40678316-40678335 | Msa1247520:five_prime_UTR | 40.0% |
AATGCTTCTTCCATGGCGAT+AGG | + | chr8_2:40671894-40671913 | None:intergenic | 45.0% | |
TGCAAGGAAGAGACTGATGA+GGG | - | chr8_2:40672820-40672839 | Msa1247520:intron | 45.0% | |
CTGTGATTGTGTTGCGGTTT+CGG | - | chr8_2:40673009-40673028 | Msa1247520:intron | 45.0% | |
TTGTCACGTGGCCTATATTG+CGG | - | chr8_2:40673083-40673102 | Msa1247520:intron | 45.0% | |
AAACACACACACACACACAC+AGG | + | chr8_2:40673179-40673198 | None:intergenic | 45.0% | |
! | GCTTTTCGTTGTGCTTTTCC+AGG | - | chr8_2:40673259-40673278 | Msa1247520:intron | 45.0% |
TGATTGTACCTCCATCCCAA+GGG | + | chr8_2:40673296-40673315 | None:intergenic | 45.0% | |
ATGATTGTACCTCCATCCCA+AGG | + | chr8_2:40673297-40673316 | None:intergenic | 45.0% | |
GCGGCTTAATGATGAAGACT+TGG | - | chr8_2:40673394-40673413 | Msa1247520:intron | 45.0% | |
CATCCTATCCTACTCGATGT+GGG | + | chr8_2:40673439-40673458 | None:intergenic | 45.0% | |
! | TGCTCGTTGGAGTATTTACG+TGG | - | chr8_2:40673457-40673476 | Msa1247520:intron | 45.0% |
! | GTTGGAGTATTTACGTGGCT+TGG | - | chr8_2:40673462-40673481 | Msa1247520:intron | 45.0% |
!! | TATGTTGTTGGTAGCAGGGT+GGG | - | chr8_2:40673827-40673846 | Msa1247520:intron | 45.0% |
TCAAAAACTGACCCGTGTCA+TGG | - | chr8_2:40674204-40674223 | Msa1247520:intron | 45.0% | |
CGCACAGTAGGTGGTTTATT+AGG | + | chr8_2:40674335-40674354 | None:intergenic | 45.0% | |
!! | CTACTGTGCGCTTTGTTTCT+CGG | - | chr8_2:40674345-40674364 | Msa1247520:intron | 45.0% |
TTTAATGCACCACAATGCCC+AGG | + | chr8_2:40674461-40674480 | None:intergenic | 45.0% | |
CGGCTACTATTGCCCTAATA+GGG | + | chr8_2:40674856-40674875 | None:intergenic | 45.0% | |
TCGGCTACTATTGCCCTAAT+AGG | + | chr8_2:40674857-40674876 | None:intergenic | 45.0% | |
! | AAAAAGCAGAAGGCACATGG+CGG | + | chr8_2:40675147-40675166 | None:intergenic | 45.0% |
! | GTATTTTGTACACGGCATCC+TGG | - | chr8_2:40675322-40675341 | Msa1247520:intron | 45.0% |
! | CATTCACCAAGTTGGCCTAT+TGG | + | chr8_2:40675689-40675708 | None:intergenic | 45.0% |
GTTGGGTTCATTCACCAAGT+TGG | + | chr8_2:40675697-40675716 | None:intergenic | 45.0% | |
AGTGGGATCGAGTTCTCATT+GGG | + | chr8_2:40675760-40675779 | None:intergenic | 45.0% | |
TAGTGGGATCGAGTTCTCAT+TGG | + | chr8_2:40675761-40675780 | None:intergenic | 45.0% | |
GGATTCATTGCTGGAACAGA+AGG | - | chr8_2:40675884-40675903 | Msa1247520:intron | 45.0% | |
TTGTTTATGCTGGGAGCTAC+AGG | + | chr8_2:40675969-40675988 | None:intergenic | 45.0% | |
!! | CAATCTTGTGATGGGCTCAT+TGG | + | chr8_2:40676008-40676027 | None:intergenic | 45.0% |
TGATTCAGCTCAGCAGATCT+AGG | + | chr8_2:40676054-40676073 | None:intergenic | 45.0% | |
GCTGAATCAAGCTCCAATGA+AGG | - | chr8_2:40676065-40676084 | Msa1247520:intron | 45.0% | |
TAGGCTTGGATTCCCTTCAT+TGG | + | chr8_2:40676081-40676100 | None:intergenic | 45.0% | |
TTCTCGCACAACTGTCAAGA+TGG | + | chr8_2:40676536-40676555 | None:intergenic | 45.0% | |
! | TGTTTGGTTCAAATAGGGGG+TGG | - | chr8_2:40677241-40677260 | Msa1247520:CDS | 45.0% |
! | GTTTGGTTCAAATAGGGGGT+GGG | - | chr8_2:40677242-40677261 | Msa1247520:CDS | 45.0% |
GGCACAAACAAGTGTTCCTA+AGG | - | chr8_2:40677578-40677597 | Msa1247520:intron | 45.0% | |
AAGCATTACTTCCACTGTGG+TGG | + | chr8_2:40677615-40677634 | None:intergenic | 45.0% | |
! | TTTGCTGGTGAGTTTGGGTT+TGG | + | chr8_2:40677948-40677967 | None:intergenic | 45.0% |
!! | CAGAGTTTGCTGGTGAGTTT+GGG | + | chr8_2:40677953-40677972 | None:intergenic | 45.0% |
!! | TCAGAGTTTGCTGGTGAGTT+TGG | + | chr8_2:40677954-40677973 | None:intergenic | 45.0% |
GTGAGATTGTTGAGCAGAGT+TGG | - | chr8_2:40678024-40678043 | Msa1247520:intron | 45.0% | |
AGCAAACACACAGTCAAGCA+AGG | + | chr8_2:40678164-40678183 | None:intergenic | 45.0% | |
CAGAAATGTGCACAACATGG+GGG | + | chr8_2:40678212-40678231 | None:intergenic | 45.0% | |
GCAGAAATGTGCACAACATG+GGG | + | chr8_2:40678213-40678232 | None:intergenic | 45.0% | |
TGGTTGACCAAGTCTATGGT+TGG | - | chr8_2:40678304-40678323 | Msa1247520:five_prime_UTR | 45.0% | |
GAATTGGCCAACCATAGACT+TGG | + | chr8_2:40678314-40678333 | None:intergenic | 45.0% | |
TTGGCCAATTCTATGGTGCA+AGG | - | chr8_2:40678323-40678342 | Msa1247520:five_prime_UTR | 45.0% | |
!!! | ACTTATTTATTTATTTATTT+TGG | - | chr8_2:40672374-40672393 | Msa1247520:intron | 5.0% |
CTTTCCTTAGCCTATCGCCA+TGG | - | chr8_2:40671881-40671900 | Msa1247520:three_prime_UTR | 50.0% | |
TCTTCCATGGCGATAGGCTA+AGG | + | chr8_2:40671888-40671907 | None:intergenic | 50.0% | |
! | TCTGACTTGCGAGTGGAGAA+GGG | + | chr8_2:40672052-40672071 | None:intergenic | 50.0% |
! | TTCTGACTTGCGAGTGGAGA+AGG | + | chr8_2:40672053-40672072 | None:intergenic | 50.0% |
CTCATCAGTCTCTTCCTTGC+AGG | + | chr8_2:40672821-40672840 | None:intergenic | 50.0% | |
CTGCAAGGAAGAGACTGATG+AGG | - | chr8_2:40672819-40672838 | Msa1247520:intron | 50.0% | |
TTGTGACGTGGCCTAGATTG+AGG | - | chr8_2:40673046-40673065 | Msa1247520:intron | 50.0% | |
CTATATTGCGGTCGCGGTTT+CGG | - | chr8_2:40673095-40673114 | Msa1247520:intron | 50.0% | |
! | TTGTGACGTGGCCTTGATTG+CGG | - | chr8_2:40673132-40673151 | Msa1247520:intron | 50.0% |
GATTGTACCTCCATCCCAAG+GGG | + | chr8_2:40673295-40673314 | None:intergenic | 50.0% | |
TCCTACTCGATGTGGGACTT+GGG | + | chr8_2:40673432-40673451 | None:intergenic | 50.0% | |
ATCCTACTCGATGTGGGACT+TGG | + | chr8_2:40673433-40673452 | None:intergenic | 50.0% | |
AGTCCCACATCGAGTAGGAT+AGG | - | chr8_2:40673433-40673452 | Msa1247520:intron | 50.0% | |
GCATCCTATCCTACTCGATG+TGG | + | chr8_2:40673440-40673459 | None:intergenic | 50.0% | |
GAGTAGGATAGGATGCTCGT+TGG | - | chr8_2:40673444-40673463 | Msa1247520:intron | 50.0% | |
!! | GTATGTTGTTGGTAGCAGGG+TGG | - | chr8_2:40673826-40673845 | Msa1247520:intron | 50.0% |
GTTGACGCTTCAGTTCACAG+AGG | - | chr8_2:40674304-40674323 | Msa1247520:intron | 50.0% | |
GAAACAAAGCGCACAGTAGG+TGG | + | chr8_2:40674344-40674363 | None:intergenic | 50.0% | |
CGAGAAACAAAGCGCACAGT+AGG | + | chr8_2:40674347-40674366 | None:intergenic | 50.0% | |
AGCGCCACAACTTGACAACA+CGG | + | chr8_2:40674777-40674796 | None:intergenic | 50.0% | |
GTTGTGGCGCTATAGCACAT+TGG | - | chr8_2:40674786-40674805 | Msa1247520:intron | 50.0% | |
AGGATGTTTAGCACACGTGC+AGG | + | chr8_2:40674967-40674986 | None:intergenic | 50.0% | |
! | GGCAAAAAGCAGAAGGCACA+TGG | + | chr8_2:40675150-40675169 | None:intergenic | 50.0% |
TGTTGCGGGCAAAAAGCAGA+AGG | + | chr8_2:40675157-40675176 | None:intergenic | 50.0% | |
!! | GTATTTTGGACACGGCATCC+TGG | - | chr8_2:40675268-40675287 | Msa1247520:intron | 50.0% |
TTTATGCTGGGAGCTACAGG+CGG | + | chr8_2:40675966-40675985 | None:intergenic | 50.0% | |
!! | GACCAGTCCTTTCTGGTTTG+CGG | - | chr8_2:40676299-40676318 | Msa1247520:intron | 50.0% |
!! | ACCAGTCCTTTCTGGTTTGC+GGG | - | chr8_2:40676300-40676319 | Msa1247520:intron | 50.0% |
!!! | CTGCCATTTTTCTCCCTAGG+TGG | - | chr8_2:40677114-40677133 | Msa1247520:intron | 50.0% |
GGGCAGGGATTTCAATGGAA+AGG | - | chr8_2:40677262-40677281 | Msa1247520:CDS | 50.0% | |
! | TTTGGCTCCCCTCCACTATA+AGG | + | chr8_2:40677435-40677454 | None:intergenic | 50.0% |
GAGGGGAGCCAAAATTGAGT+CGG | - | chr8_2:40677442-40677461 | Msa1247520:intron | 50.0% | |
AGGGGAGCCAAAATTGAGTC+GGG | - | chr8_2:40677443-40677462 | Msa1247520:intron | 50.0% | |
GAGCCAAAATTGAGTCGGGA+TGG | - | chr8_2:40677447-40677466 | Msa1247520:intron | 50.0% | |
ACAAGTGTTCCTAAGGGGCA+AGG | - | chr8_2:40677585-40677604 | Msa1247520:intron | 50.0% | |
!! | CAGCAAACTCTGAAGCTGCT+CGG | - | chr8_2:40677961-40677980 | Msa1247520:intron | 50.0% |
GGCACCTTGCACCATAGAAT+TGG | + | chr8_2:40678330-40678349 | None:intergenic | 50.0% | |
! | GAGAGGTTCTGACTTGCGAG+TGG | + | chr8_2:40672059-40672078 | None:intergenic | 55.0% |
!! | TGAGGATGTCGACTCCTGCA+AGG | - | chr8_2:40672804-40672823 | Msa1247520:intron | 55.0% |
TTGCAACAAGATCCCCCTGC+TGG | - | chr8_2:40672854-40672873 | Msa1247520:intron | 55.0% | |
CGAAACCGCGACCGCAATAT+AGG | + | chr8_2:40673097-40673116 | None:intergenic | 55.0% | |
AACATCCGCGACCGCAATCA+AGG | + | chr8_2:40673146-40673165 | None:intergenic | 55.0% | |
! | CATTGAGTGCCTGGGCATTG+TGG | - | chr8_2:40674449-40674468 | Msa1247520:intron | 55.0% |
CCTCTGAGCTATGGGAGTTG+AGG | + | chr8_2:40675605-40675624 | None:intergenic | 55.0% | |
CCTCAACTCCCATAGCTCAG+AGG | - | chr8_2:40675602-40675621 | Msa1247520:intron | 55.0% | |
TAGTCGGGACCAGTCCTTTC+TGG | - | chr8_2:40676292-40676311 | Msa1247520:intron | 55.0% | |
ACCCGCAAACCAGAAAGGAC+TGG | + | chr8_2:40676304-40676323 | None:intergenic | 55.0% | |
GTTCAAATAGGGGGTGGGCA+GGG | - | chr8_2:40677247-40677266 | Msa1247520:CDS | 55.0% | |
GCTCCCCTCCACTATAAGGA+AGG | + | chr8_2:40677431-40677450 | None:intergenic | 55.0% | |
GGTGGAAATCCTTGCCCCTT+AGG | + | chr8_2:40677597-40677616 | None:intergenic | 55.0% | |
GGCAAGGATTTCCACCACAG+TGG | - | chr8_2:40677601-40677620 | Msa1247520:intron | 55.0% | |
CGAGCAGCTTCAGAGTTTGC+TGG | + | chr8_2:40677963-40677982 | None:intergenic | 55.0% | |
CGAGTGGAGAAGGGTGAGAG+AGG | + | chr8_2:40672043-40672062 | None:intergenic | 60.0% | |
ATCCCCCTGCTGGCATCAGT+GGG | - | chr8_2:40672864-40672883 | Msa1247520:intron | 60.0% | |
CGTGGCCTATATTGCGGTCG+CGG | - | chr8_2:40673089-40673108 | Msa1247520:intron | 60.0% | |
CAGGCCAGATGACACCCCTT+GGG | - | chr8_2:40673278-40673297 | Msa1247520:intron | 60.0% | |
!! | CCATCCCAAGGGGTGTCATC+TGG | + | chr8_2:40673285-40673304 | None:intergenic | 60.0% |
CCAGATGACACCCCTTGGGA+TGG | - | chr8_2:40673282-40673301 | Msa1247520:intron | 60.0% | |
GATGACACCCCTTGGGATGG+AGG | - | chr8_2:40673285-40673304 | Msa1247520:intron | 60.0% | |
GCCCAAGTCCCACATCGAGT+AGG | - | chr8_2:40673428-40673447 | Msa1247520:intron | 60.0% | |
GGTTCAAATAGGGGGTGGGC+AGG | - | chr8_2:40677246-40677265 | Msa1247520:CDS | 60.0% | |
GGGGTGGGCAGGGATTTCAA+TGG | - | chr8_2:40677257-40677276 | Msa1247520:CDS | 60.0% | |
GATCCCCCTGCTGGCATCAG+TGG | - | chr8_2:40672863-40672882 | Msa1247520:intron | 65.0% | |
TCCCCCTGCTGGCATCAGTG+GGG | - | chr8_2:40672865-40672884 | Msa1247520:intron | 65.0% | |
AGCCCCACTGATGCCAGCAG+GGG | + | chr8_2:40672870-40672889 | None:intergenic | 65.0% | |
GAGCCCCACTGATGCCAGCA+GGG | + | chr8_2:40672871-40672890 | None:intergenic | 65.0% | |
! | CGTGGCCTTGATTGCGGTCG+CGG | - | chr8_2:40673138-40673157 | Msa1247520:intron | 65.0% |
!! | CCAAGGGGTGTCATCTGGCC+TGG | + | chr8_2:40673280-40673299 | None:intergenic | 65.0% |
CCAGGCCAGATGACACCCCT+TGG | - | chr8_2:40673277-40673296 | Msa1247520:intron | 65.0% | |
GCCCCACTGATGCCAGCAGG+GGG | + | chr8_2:40672869-40672888 | None:intergenic | 70.0% | |
GGAGCCCCACTGATGCCAGC+AGG | + | chr8_2:40672872-40672891 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_2 | gene | 40671809 | 40678354 | 40671809 | ID=Msa1247520;Name=Msa1247520 |
chr8_2 | mRNA | 40671809 | 40678354 | 40671809 | ID=Msa1247520-mRNA-1;Parent=Msa1247520;Name=Msa1247520-mRNA-1;_AED=0.03;_eAED=0.03;_QI=266|1|1|1|0.8|0.83|6|296|152 |
chr8_2 | exon | 40671809 | 40672233 | 40671809 | ID=Msa1247520-mRNA-1:exon:12399;Parent=Msa1247520-mRNA-1 |
chr8_2 | exon | 40673167 | 40673255 | 40673167 | ID=Msa1247520-mRNA-1:exon:12398;Parent=Msa1247520-mRNA-1 |
chr8_2 | exon | 40675780 | 40675869 | 40675780 | ID=Msa1247520-mRNA-1:exon:12397;Parent=Msa1247520-mRNA-1 |
chr8_2 | exon | 40676857 | 40676882 | 40676857 | ID=Msa1247520-mRNA-1:exon:12396;Parent=Msa1247520-mRNA-1 |
chr8_2 | exon | 40677230 | 40677363 | 40677230 | ID=Msa1247520-mRNA-1:exon:12395;Parent=Msa1247520-mRNA-1 |
chr8_2 | exon | 40678098 | 40678354 | 40678098 | ID=Msa1247520-mRNA-1:exon:12394;Parent=Msa1247520-mRNA-1 |
chr8_2 | five_prime_UTR | 40678098 | 40678354 | 40678098 | ID=Msa1247520-mRNA-1:five_prime_utr;Parent=Msa1247520-mRNA-1 |
chr8_2 | five_prime_UTR | 40677355 | 40677363 | 40677355 | ID=Msa1247520-mRNA-1:five_prime_utr;Parent=Msa1247520-mRNA-1 |
chr8_2 | CDS | 40677230 | 40677354 | 40677230 | ID=Msa1247520-mRNA-1:cds;Parent=Msa1247520-mRNA-1 |
chr8_2 | CDS | 40676857 | 40676882 | 40676857 | ID=Msa1247520-mRNA-1:cds;Parent=Msa1247520-mRNA-1 |
chr8_2 | CDS | 40675780 | 40675869 | 40675780 | ID=Msa1247520-mRNA-1:cds;Parent=Msa1247520-mRNA-1 |
chr8_2 | CDS | 40673167 | 40673255 | 40673167 | ID=Msa1247520-mRNA-1:cds;Parent=Msa1247520-mRNA-1 |
chr8_2 | CDS | 40672105 | 40672233 | 40672105 | ID=Msa1247520-mRNA-1:cds;Parent=Msa1247520-mRNA-1 |
chr8_2 | three_prime_UTR | 40671809 | 40672104 | 40671809 | ID=Msa1247520-mRNA-1:three_prime_utr;Parent=Msa1247520-mRNA-1 |
Gene Sequence |
Protein sequence |