AlfalfaGEDB | Msa1061020

M. sativa cultivar zhongmu-4 / Msa1061020

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1061020	ACJ83367.1	97.143	35	1	0	59	93	5	39	1.28e-15	76.6

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1061020	sp\|Q94IC4\|FRI2_SOYBN	88.571	35	4	0	59	93	149	183	2.61e-15	71.6

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1061020	B7FFH0	97.143	35	1	0	59	93	5	39	6.14e-16	76.6

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0014710	Msa1061020	-0.810720	1.001966e-50	-8.615850e-47
Msa0015390	Msa1061020	-0.801927	7.145141e-49	-8.615850e-47
Msa0017510	Msa1061020	-0.817852	2.659211e-52	-8.615850e-47
Msa0036920	Msa1061020	-0.820581	6.358684e-53	-8.615850e-47
Msa0039330	Msa1061020	-0.807397	5.156062e-50	-8.615850e-47
Msa0050380	Msa1061020	-0.803838	2.879713e-49	-8.615850e-47
Msa0050390	Msa1061020	-0.801383	9.241874e-49	-8.615850e-47
Msa0101810	Msa1061020	0.809950	1.468440e-50	-8.615850e-47
Msa0107640	Msa1061020	-0.804399	2.201296e-49	-8.615850e-47
Msa0613440	Msa1061020	-0.805151	1.533265e-49	-8.615850e-47
Msa0648880	Msa1061020	-0.811326	7.405742e-51	-8.615850e-47
Msa0654930	Msa1061020	0.817865	2.642278e-52	-8.615850e-47
Msa0657610	Msa1061020	-0.809769	1.606491e-50	-8.615850e-47
Msa0658570	Msa1061020	-0.812246	4.668682e-51	-8.615850e-47
Msa0661190	Msa1061020	0.800604	1.333331e-48	-8.615850e-47
Msa0663380	Msa1061020	-0.809321	2.004802e-50	-8.615850e-47
Msa0679290	Msa1061020	0.802711	4.928364e-49	-8.615850e-47
Msa0691050	Msa1061020	-0.817700	2.878825e-52	-8.615850e-47
Msa0691380	Msa1061020	-0.807435	5.061797e-50	-8.615850e-47
Msa0698930	Msa1061020	-0.800056	1.723451e-48	-8.615850e-47
Msa0724210	Msa1061020	-0.810666	1.028817e-50	-8.615850e-47
Msa0731940	Msa1061020	-0.831347	1.758001e-55	-8.615850e-47
Msa0735170	Msa1061020	-0.818540	1.858250e-52	-8.615850e-47
Msa0743720	Msa1061020	-0.809859	1.536575e-50	-8.615850e-47
Msa0757450	Msa1061020	0.820895	5.386200e-53	-8.615850e-47
Msa0757500	Msa1061020	0.835592	1.534474e-56	-8.615850e-47
Msa0760130	Msa1061020	-0.822601	2.171214e-53	-8.615850e-47
Msa0766630	Msa1061020	-0.806935	6.459005e-50	-8.615850e-47
Msa0768370	Msa1061020	-0.806212	9.178911e-50	-8.615850e-47
Msa0776990	Msa1061020	-0.804339	2.265245e-49	-8.615850e-47
Msa0777570	Msa1061020	0.805016	1.636350e-49	-8.615850e-47
Msa0787470	Msa1061020	-0.818826	1.600473e-52	-8.615850e-47
Msa0810220	Msa1061020	-0.816183	6.306244e-52	-8.615850e-47
Msa0130970	Msa1061020	-0.815545	8.752455e-52	-8.615850e-47
Msa0131770	Msa1061020	-0.807744	4.351375e-50	-8.615850e-47
Msa0133980	Msa1061020	0.814401	1.569794e-51	-8.615850e-47
Msa0157290	Msa1061020	-0.817793	2.742749e-52	-8.615850e-47
Msa0201070	Msa1061020	-0.807217	5.629772e-50	-8.615850e-47
Msa0215320	Msa1061020	0.858744	6.675037e-63	-8.615850e-47
Msa0220740	Msa1061020	-0.839690	1.362463e-57	-8.615850e-47
Msa0223410	Msa1061020	0.801179	1.017147e-48	-8.615850e-47
Msa0237070	Msa1061020	-0.804062	2.586550e-49	-8.615850e-47
Msa0376590	Msa1061020	-0.818631	1.772143e-52	-8.615850e-47
Msa0381620	Msa1061020	0.804606	1.992415e-49	-8.615850e-47
Msa0388960	Msa1061020	-0.831404	1.701881e-55	-8.615850e-47
Msa0392040	Msa1061020	0.801281	9.694108e-49	-8.615850e-47
Msa0392180	Msa1061020	-0.823389	1.422003e-53	-8.615850e-47
Msa0395770	Msa1061020	0.808053	3.740243e-50	-8.615850e-47
Msa0395790	Msa1061020	-0.818110	2.325689e-52	-8.615850e-47
Msa0396060	Msa1061020	-0.817807	2.722831e-52	-8.615850e-47
Msa0416650	Msa1061020	-0.803048	4.198735e-49	-8.615850e-47
Msa0444750	Msa1061020	0.826166	3.149410e-54	-8.615850e-47
Msa0458440	Msa1061020	-0.809846	1.546233e-50	-8.615850e-47
Msa0466390	Msa1061020	-0.808909	2.456927e-50	-8.615850e-47
Msa0467060	Msa1061020	-0.805337	1.401738e-49	-8.615850e-47
Msa0469940	Msa1061020	0.812183	4.818756e-51	-8.615850e-47
Msa0990960	Msa1061020	-0.814102	1.828042e-51	-8.615850e-47
Msa0992280	Msa1061020	-0.809555	1.786223e-50	-8.615850e-47
Msa0993290	Msa1061020	-0.807553	4.777876e-50	-8.615850e-47
Msa0993600	Msa1061020	-0.805872	1.082395e-49	-8.615850e-47
Msa0998690	Msa1061020	-0.810675	1.024442e-50	-8.615850e-47
Msa1000900	Msa1061020	-0.807064	6.065883e-50	-8.615850e-47
Msa1014540	Msa1061020	-0.835257	1.864251e-56	-8.615850e-47
Msa1028970	Msa1061020	-0.818867	1.566392e-52	-8.615850e-47
Msa1060980	Msa1061020	0.957306	3.731199e-115	-8.615850e-47
Msa1061020	Msa1061060	0.988642	7.936215e-175	-8.615850e-47
Msa1061020	Msa1068200	0.806746	7.081693e-50	-8.615850e-47
Msa1061020	Msa1075220	0.851845	6.806474e-61	-8.615850e-47
Msa1061020	Msa1077390	-0.821803	3.323840e-53	-8.615850e-47
Msa1061020	Msa1082580	-0.836823	7.463411e-57	-8.615850e-47
Msa1061020	Msa1084260	-0.804684	1.919158e-49	-8.615850e-47
Msa1061020	Msa1090260	-0.808076	3.699588e-50	-8.615850e-47
Msa1061020	Msa1116130	0.827520	1.495437e-54	-8.615850e-47
Msa1061020	Msa1121450	0.814348	1.612634e-51	-8.615850e-47
Msa1061020	Msa1121480	-0.819670	1.028348e-52	-8.615850e-47
Msa1061020	Msa1121490	-0.854088	1.553642e-61	-8.615850e-47
Msa1061020	Msa1137570	-0.830213	3.332985e-55	-8.615850e-47
Msa1061020	Msa1139000	0.827904	1.209153e-54	-8.615850e-47
Msa1061020	Msa1156020	-0.805220	1.482731e-49	-8.615850e-47
Msa1061020	Msa1156340	0.805857	1.090170e-49	-8.615850e-47
Msa1061020	Msa1158310	-0.802233	6.183721e-49	-8.615850e-47
Msa1061020	Msa1162550	0.876941	9.354286e-69	-8.615850e-47
Msa1061020	Msa1186950	0.847216	1.330321e-59	-8.615850e-47
Msa1061020	Msa1192130	0.815268	1.008704e-51	-8.615850e-47
Msa1061020	Msa1197290	-0.806563	7.742446e-50	-8.615850e-47
Msa1061020	Msa1205130	-0.814116	1.815212e-51	-8.615850e-47
Msa1061020	Msa1229600	-0.800129	1.665806e-48	-8.615850e-47
Msa1061020	Msa1233890	-0.819458	1.149086e-52	-8.615850e-47
Msa1061020	Msa1238930	-0.801628	8.233543e-49	-8.615850e-47
Msa1061020	Msa1239530	-0.824973	6.037580e-54	-8.615850e-47
Msa1061020	Msa1244250	-0.818753	1.662364e-52	-8.615850e-47
Msa1061020	Msa1247520	0.807322	5.349825e-50	-8.615850e-47
Msa1061020	Msa1249490	-0.816353	5.776257e-52	-8.615850e-47
Msa1061020	Msa1259490	0.818683	1.724470e-52	-8.615850e-47
Msa1061020	Msa1277660	-0.806946	6.423801e-50	-8.615850e-47
Msa1061020	Msa1282580	0.853195	2.805504e-61	-8.615850e-47
Msa1061020	Msa1284680	-0.829156	6.027272e-55	-8.615850e-47
Msa1061020	Msa1284710	-0.801424	9.064927e-49	-8.615850e-47
Msa1061020	Msa1306850	-0.801400	9.167319e-49	-8.615850e-47
Msa1061020	Msa1310210	-0.810459	1.140654e-50	-8.615850e-47
Msa1061020	Msa1312560	-0.802263	6.094496e-49	-8.615850e-47
Msa1061020	Msa1313150	-0.822964	1.786564e-53	-8.615850e-47
Msa1061020	Msa1336670	-0.801685	8.013743e-49	-8.615850e-47
Msa1061020	Msa1353470	-0.807977	3.883001e-50	-8.615850e-47
Msa1061020	Msa1359040	-0.829932	3.903027e-55	-8.615850e-47
Msa1061020	Msa1376890	-0.801450	8.952527e-49	-8.615850e-47
Msa1061020	Msa1379500	-0.801301	9.604331e-49	-8.615850e-47
Msa1061020	Msa1390050	-0.800423	1.451273e-48	-8.615850e-47
Msa1061020	Msa1390120	-0.803824	2.899172e-49	-8.615850e-47
Msa1061020	Msa1393410	-0.808982	2.370062e-50	-8.615850e-47
Msa1061020	Msa1395530	-0.806381	8.456879e-50	-8.615850e-47
Msa1061020	Msa1420820	-0.807473	4.969553e-50	-8.615850e-47
Msa1061020	Msa1423880	-0.835432	1.684267e-56	-8.615850e-47
Msa1061020	Msa1435420	-0.808334	3.259427e-50	-8.615850e-47
Msa1061020	Msa1445610	0.801380	9.255366e-49	-8.615850e-47
Msa1061020	Msa1448640	-0.822894	1.855730e-53	-8.615850e-47
Msa1061020	Msa1451620	0.832908	7.228048e-56	-8.615850e-47
Msa1061020	Msa1453320	-0.804381	2.220170e-49	-8.615850e-47
Msa1061020	Msa1457040	-0.801596	8.358466e-49	-8.615850e-47
Msa1061020	Msa1466540	-0.816138	6.453033e-52	-8.615850e-47
Msa0241640	Msa1061020	-0.800172	1.632210e-48	-8.615850e-47
Msa0251640	Msa1061020	-0.801722	7.873638e-49	-8.615850e-47
Msa0257460	Msa1061020	-0.805077	1.589054e-49	-8.615850e-47
Msa0269810	Msa1061020	-0.828574	8.337460e-55	-8.615850e-47
Msa0278190	Msa1061020	-0.817709	2.864829e-52	-8.615850e-47
Msa0279790	Msa1061020	-0.802556	5.303577e-49	-8.615850e-47
Msa0288100	Msa1061020	-0.803308	3.708318e-49	-8.615850e-47
Msa0294560	Msa1061020	0.803730	3.032562e-49	-8.615850e-47
Msa0302580	Msa1061020	0.804075	2.570995e-49	-8.615850e-47
Msa0305190	Msa1061020	-0.818169	2.254977e-52	-8.615850e-47
Msa0306210	Msa1061020	0.802342	5.871904e-49	-8.615850e-47
Msa0321310	Msa1061020	-0.801090	1.060929e-48	-8.615850e-47
Msa0336040	Msa1061020	0.805009	1.641319e-49	-8.615850e-47
Msa0340450	Msa1061020	-0.827235	1.749573e-54	-8.615850e-47
Msa0344690	Msa1061020	0.823738	1.178668e-53	-8.615850e-47
Msa0350320	Msa1061020	0.800144	1.654058e-48	-8.615850e-47
Msa0350990	Msa1061020	-0.821559	3.786425e-53	-8.615850e-47
Msa0351030	Msa1061020	-0.829262	5.680342e-55	-8.615850e-47
Msa0351100	Msa1061020	-0.807964	3.907934e-50	-8.615850e-47
Msa0516370	Msa1061020	-0.819639	1.045048e-52	-8.615850e-47
Msa0517110	Msa1061020	-0.809139	2.193689e-50	-8.615850e-47
Msa0555020	Msa1061020	-0.809657	1.697931e-50	-8.615850e-47
Msa0558690	Msa1061020	-0.801114	1.048818e-48	-8.615850e-47
Msa0574760	Msa1061020	0.840151	1.033520e-57	-8.615850e-47
Msa0585000	Msa1061020	0.820644	6.150404e-53	-8.615850e-47
Msa0585230	Msa1061020	-0.807255	5.526955e-50	-8.615850e-47
Msa0844490	Msa1061020	-0.800688	1.281650e-48	-8.615850e-47
Msa0880140	Msa1061020	-0.817212	3.707537e-52	-8.615850e-47
Msa0891040	Msa1061020	-0.812698	3.719083e-51	-8.615850e-47
Msa0907070	Msa1061020	-0.818019	2.438889e-52	-8.615850e-47
Msa0908770	Msa1061020	0.961880	3.228013e-120	-8.615850e-47
Msa0913480	Msa1061020	0.801926	7.149399e-49	-8.615850e-47
Msa0919850	Msa1061020	-0.806732	7.129478e-50	-8.615850e-47
Msa0927380	Msa1061020	-0.806451	8.173051e-50	-8.615850e-47
Msa0930910	Msa1061020	0.813302	2.742375e-51	-8.615850e-47
Msa0936300	Msa1061020	-0.813988	1.936299e-51	-8.615850e-47
Msa0942200	Msa1061020	-0.811247	7.702815e-51	-8.615850e-47
Msa0947660	Msa1061020	-0.810502	1.116482e-50	-8.615850e-47
Msa0954130	Msa1061020	-0.818311	2.093927e-52	-8.615850e-47
Msa0954550	Msa1061020	-0.807186	5.715987e-50	-8.615850e-47
Msa0967180	Msa1061020	-0.815531	8.813869e-52	-8.615850e-47
Msa0969520	Msa1061020	-0.837571	4.805315e-57	-8.615850e-47
Msa0973100	Msa1061020	-0.803105	4.086373e-49	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1061020	MtrunA17_Chr4g0005581	97.143	35	1	0	59	93	147	181	1.57e-18	77.0
Msa1061020	MtrunA17_Chr7g0243241	75.000	36	9	0	58	93	147	182	1.14e-13	64.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1061020	AT5G01600.1	85.714	35	5	0	59	93	152	186	1.55e-14	67.0
Msa1061020	AT3G56090.1	75.000	36	9	0	58	93	152	187	6.44e-12	60.1

Find 72 sgRNAs with CRISPR-Local

Find 306 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGCACAAAGTTCTTTAAATT+TGG	0.116564	7_2:+49942258	None:intergenic
TTGGAGTAGAAGAAATATTT+TGG	0.229234	7_2:-49942369	Msa1061020:three_prime_UTR
TCTTCACAAGGGAGGATCTT+TGG	0.259240	7_2:+49942135	None:intergenic
TGGTTGTATCCATGAATATT+TGG	0.261284	7_2:-49942349	Msa1061020:three_prime_UTR
AAGTTTCAATTTGACAATTA+AGG	0.262997	7_2:+49942412	None:intergenic
AATTGTATTGATAACAAATT+AGG	0.264616	7_2:+49941858	None:intergenic
GCCATGGAATTGGCTGTCTT+TGG	0.267558	7_2:-49942684	Msa1061020:CDS
CTGAACCCATGCTACGTAAC+TGG	0.301815	7_2:-49941964	Msa1061020:three_prime_UTR
TCGATGAAGTCTGCCAATTA+AGG	0.322512	7_2:+49942467	None:intergenic
TCGTAACAATGATCCTTAAT+TGG	0.332568	7_2:-49942480	Msa1061020:three_prime_UTR
AGGATCTTTGGAGTGTGGGC+AGG	0.340220	7_2:+49942147	None:intergenic
TTGGAGTGTGGGCAGGGCTT+TGG	0.344575	7_2:+49942154	None:intergenic
GCCTTCAAAACAAGTGAATA+TGG	0.347432	7_2:-49941989	Msa1061020:three_prime_UTR
AGAATTTGATCATGCAGAAA+AGG	0.391733	7_2:-49942934	Msa1061020:CDS
TCTGAGGGAGGGCTCACAAT+AGG	0.396058	7_2:+49942954	None:intergenic
AAACATCTACCAAATATTCA+TGG	0.397452	7_2:+49942340	None:intergenic
AGAAGCCTCAAGAGCGGATG+AGG	0.415926	7_2:-49942103	Msa1061020:three_prime_UTR
GGATCTTTGGAGTGTGGGCA+GGG	0.444116	7_2:+49942148	None:intergenic
CTGAGGGAGGGCTCACAATA+GGG	0.446437	7_2:+49942955	None:intergenic
ATTACTTGGATGATATTACT+TGG	0.456112	7_2:-49942313	Msa1061020:three_prime_UTR
GAAATTCCAGTTACGTAGCA+TGG	0.479187	7_2:+49941958	None:intergenic
GGGCTTTGGTGTAACATTGA+AGG	0.483853	7_2:+49942168	None:intergenic
TCCTCCTCTGTCTCTAGCTC+CGG	0.487582	7_2:-49944016	Msa1061020:CDS
CTAAACACATGTCCCTCAAA+AGG	0.491007	7_2:+49941912	None:intergenic
GGATTGACGGTGGGTTTGAT+CGG	0.493933	7_2:+49943971	None:intergenic
ATTGTTTCAACATTGTGGAC+AGG	0.496676	7_2:-49942232	Msa1061020:three_prime_UTR
CCTCCCTTGTGAAGAAGTCT+AGG	0.513526	7_2:-49942127	Msa1061020:three_prime_UTR
ATTGACTTAGCTTTGCTCGT+TGG	0.519060	7_2:-49942195	Msa1061020:three_prime_UTR
GAATTTGATCATGCAGAAAA+GGG	0.523661	7_2:-49942933	Msa1061020:CDS
ACCCACCGTCAATCCTTCTC+CGG	0.524828	7_2:-49943963	Msa1061020:intron
GAGGATACGTCGATCGGAGA+TGG	0.528014	7_2:+49944034	None:intergenic
TGATTTGTTTAGAACATTCG+AGG	0.529198	7_2:-49942996	Msa1061020:intron
CAGAGATTGTTTCAACATTG+TGG	0.529476	7_2:-49942237	Msa1061020:three_prime_UTR
GGCTTTGGTGTAACATTGAA+GGG	0.530378	7_2:+49942169	None:intergenic
ATCCACCGGAGAAGGATTGA+CGG	0.532528	7_2:+49943958	None:intergenic
AAATTCCAGTTACGTAGCAT+GGG	0.532895	7_2:+49941959	None:intergenic
AGGGCGCACGGAGGAAGTGA+TGG	0.541491	7_2:+49944066	None:intergenic
TTCTGCATGATCAAATTCTG+AGG	0.542218	7_2:+49942938	None:intergenic
ATCGGAGATGGTGGAAGAAG+AGG	0.542512	7_2:+49944046	None:intergenic
GATACGTCGATCGGAGATGG+TGG	0.543439	7_2:+49944037	None:intergenic
AGGGAGGATCTTTGGAGTGT+GGG	0.547566	7_2:+49942143	None:intergenic
TCCTCTGTCTCTAGCTCCGG+TGG	0.547712	7_2:-49944013	Msa1061020:CDS
AAGACCCTCATCCGCTCTTG+AGG	0.548029	7_2:+49942098	None:intergenic
TCTGCATGATCAAATTCTGA+GGG	0.551161	7_2:+49942939	None:intergenic
CGGAGGAGATAGAGATCCAC+CGG	0.554678	7_2:+49943997	None:intergenic
TCGGAGATGGTGGAAGAAGA+GGG	0.554770	7_2:+49944047	None:intergenic
AGAGCGGATGAGGGTCTTGA+CGG	0.560421	7_2:-49942093	Msa1061020:three_prime_UTR
TCCAAAGACAGCCAATTCCA+TGG	0.569848	7_2:+49942683	None:intergenic
TGGTGGAAGAAGAGGGCGCA+CGG	0.573169	7_2:+49944054	None:intergenic
GATCAGAGATCCACCGGAGA+AGG	0.580807	7_2:+49943950	None:intergenic
GAAAAGGGAGATGCATTGTA+TGG	0.589420	7_2:-49942918	Msa1061020:intron
AAGGGAGGATCTTTGGAGTG+TGG	0.591066	7_2:+49942142	None:intergenic
ACAGAGGAGGATACGTCGAT+CGG	0.603335	7_2:+49944028	None:intergenic
CATGATCAAATTCTGAGGGA+GGG	0.603900	7_2:+49942943	None:intergenic
ACCGGAGAAGGATTGACGGT+GGG	0.606201	7_2:+49943962	None:intergenic
ACGGTGGGTTTGATCGGAGA+CGG	0.609139	7_2:+49943977	None:intergenic
GCATGATCAAATTCTGAGGG+AGG	0.609988	7_2:+49942942	None:intergenic
GCGCACGGAGGAAGTGATGG+TGG	0.610315	7_2:+49944069	None:intergenic
CTAGGCAGAAGCCTCAAGAG+CGG	0.638849	7_2:-49942109	Msa1061020:three_prime_UTR
AAGTAATTCAACATCAAGAG+AGG	0.643005	7_2:+49941889	None:intergenic
GAACATTCGAGGTGGAAGAG+TGG	0.645020	7_2:-49942985	Msa1061020:CDS
AAAGCTAAGTCAATGAAGAG+AGG	0.649380	7_2:+49942204	None:intergenic
TCCACCGGAGCTAGAGACAG+AGG	0.651482	7_2:+49944012	None:intergenic
GAAGCCTCAAGAGCGGATGA+GGG	0.661946	7_2:-49942102	Msa1061020:three_prime_UTR
CCTAGACTTCTTCACAAGGG+AGG	0.667480	7_2:+49942127	None:intergenic
ACCGGAGCTAGAGACAGAGG+AGG	0.671704	7_2:+49944015	None:intergenic
CACCGGAGAAGGATTGACGG+TGG	0.685682	7_2:+49943961	None:intergenic
TCTGCCTAGACTTCTTCACA+AGG	0.686387	7_2:+49942123	None:intergenic
GTGGGTTTGATCGGAGACGG+AGG	0.686516	7_2:+49943980	None:intergenic
TTTGTTTAGAACATTCGAGG+TGG	0.691243	7_2:-49942993	Msa1061020:intron
CTGCCTAGACTTCTTCACAA+GGG	0.694383	7_2:+49942124	None:intergenic
TGGAAGAAGAGGGCGCACGG+AGG	0.751026	7_2:+49944057	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATAATTAACAAAAAGATTAA+AGG	+	chr7_2:49942422-49942441	None:intergenic	10.0%
!!	ATAATTAACAAAAAGATTAA+AGG	+	chr7_2:49942422-49942441	None:intergenic	10.0%
!!	TTATGTTTCATGAATATAAT+AGG	-	chr7_2:49943472-49943491	Msa1061020:intron	15.0%
!!	TTATGTTTCATGAATATAAT+AGG	-	chr7_2:49943472-49943491	Msa1061020:intron	15.0%
!!	TTGTAAAATCTAGCATAATT+AGG	-	chr7_2:49942345-49942364	Msa1061020:three_prime_UTR	20.0%
!!	GATAATTAAATATTCAGCAA+TGG	-	chr7_2:49942526-49942545	Msa1061020:intron	20.0%
!!	TGATAAGATATCATAGTTTA+TGG	-	chr7_2:49942727-49942746	Msa1061020:intron	20.0%
!!	ATATGATAAATCAAAACAGA+GGG	+	chr7_2:49943129-49943148	None:intergenic	20.0%
!!	AATATGATAAATCAAAACAG+AGG	+	chr7_2:49943130-49943149	None:intergenic	20.0%
!!!	TGATAATAGTTTTGAGAATA+TGG	-	chr7_2:49943195-49943214	Msa1061020:intron	20.0%
!!	ATATACATATTGAGATCAAA+TGG	-	chr7_2:49943433-49943452	Msa1061020:intron	20.0%
!!	AAGTTTCAATTTGACAATTA+AGG	+	chr7_2:49943573-49943592	None:intergenic	20.0%
!!!	AAATCATTTTTCTGTATACT+TGG	-	chr7_2:49943594-49943613	Msa1061020:intron	20.0%
!!	AAAGGAAAAAAGAAAAAAAC+AGG	+	chr7_2:49944055-49944074	None:intergenic	20.0%
!!!	TTTTTTCTTTTTTCCTTTTG+AGG	-	chr7_2:49944057-49944076	Msa1061020:CDS	20.0%
!!!	TTTTTCTTTTTTCCTTTTGA+GGG	-	chr7_2:49944058-49944077	Msa1061020:CDS	20.0%
!!	TTGTAAAATCTAGCATAATT+AGG	-	chr7_2:49942345-49942364	Msa1061020:three_prime_UTR	20.0%
!!	GATAATTAAATATTCAGCAA+TGG	-	chr7_2:49942526-49942545	Msa1061020:intron	20.0%
!!	TGATAAGATATCATAGTTTA+TGG	-	chr7_2:49942727-49942746	Msa1061020:intron	20.0%
!!	ATATGATAAATCAAAACAGA+GGG	+	chr7_2:49943129-49943148	None:intergenic	20.0%
!!	AATATGATAAATCAAAACAG+AGG	+	chr7_2:49943130-49943149	None:intergenic	20.0%
!!!	TGATAATAGTTTTGAGAATA+TGG	-	chr7_2:49943195-49943214	Msa1061020:intron	20.0%
!!	ATATACATATTGAGATCAAA+TGG	-	chr7_2:49943433-49943452	Msa1061020:intron	20.0%
!!	AAGTTTCAATTTGACAATTA+AGG	+	chr7_2:49943573-49943592	None:intergenic	20.0%
!!!	AAATCATTTTTCTGTATACT+TGG	-	chr7_2:49943594-49943613	Msa1061020:intron	20.0%
!!	AAAGGAAAAAAGAAAAAAAC+AGG	+	chr7_2:49944055-49944074	None:intergenic	20.0%
!!!	TTTTTTCTTTTTTCCTTTTG+AGG	-	chr7_2:49944057-49944076	Msa1061020:CDS	20.0%
!!!	TTTTTCTTTTTTCCTTTTGA+GGG	-	chr7_2:49944058-49944077	Msa1061020:CDS	20.0%
!	TGATCTGTATGAAATTGAAT+TGG	-	chr7_2:49942459-49942478	Msa1061020:three_prime_UTR	25.0%
!	GTATGAAATTGAATTGGTTA+TGG	-	chr7_2:49942465-49942484	Msa1061020:three_prime_UTR	25.0%
!!!	TATTTTTGTTATTTGGTCTC+TGG	-	chr7_2:49942559-49942578	Msa1061020:intron	25.0%
!	TAGCATACAATTTCATTTGA+AGG	-	chr7_2:49942689-49942708	Msa1061020:intron	25.0%
!	AGCATACAATTTCATTTGAA+GGG	-	chr7_2:49942690-49942709	Msa1061020:intron	25.0%
!	AAGATATCATAGTTTATGGA+TGG	-	chr7_2:49942731-49942750	Msa1061020:intron	25.0%
!	ATATATGGAAATTAGATGCA+TGG	-	chr7_2:49942923-49942942	Msa1061020:CDS	25.0%
!	TATATGGAAATTAGATGCAT+GGG	-	chr7_2:49942924-49942943	Msa1061020:CDS	25.0%
!	TTATTGCATGAGAAAAAACA+GGG	+	chr7_2:49943396-49943415	None:intergenic	25.0%
!	TTTATTGCATGAGAAAAAAC+AGG	+	chr7_2:49943397-49943416	None:intergenic	25.0%
!	TGATCTCAATATGTATATAC+AGG	+	chr7_2:49943431-49943450	None:intergenic	25.0%
!	TGTTTCATGAATATAATAGG+TGG	-	chr7_2:49943475-49943494	Msa1061020:intron	25.0%
!!	TTGGAGTAGAAGAAATATTT+TGG	-	chr7_2:49943613-49943632	Msa1061020:intron	25.0%
!	AAACATCTACCAAATATTCA+TGG	+	chr7_2:49943645-49943664	None:intergenic	25.0%
!!!	GTAGATGTTTTTAGATTACT+TGG	-	chr7_2:49943655-49943674	Msa1061020:intron	25.0%
!	ATTACTTGGATGATATTACT+TGG	-	chr7_2:49943669-49943688	Msa1061020:intron	25.0%
!	TGCACAAAGTTCTTTAAATT+TGG	+	chr7_2:49943727-49943746	None:intergenic	25.0%
!!!	AATATCATTTGCTGATTTAC+AGG	-	chr7_2:49943971-49943990	Msa1061020:CDS	25.0%
!	TGATCTGTATGAAATTGAAT+TGG	-	chr7_2:49942459-49942478	Msa1061020:three_prime_UTR	25.0%
!	GTATGAAATTGAATTGGTTA+TGG	-	chr7_2:49942465-49942484	Msa1061020:three_prime_UTR	25.0%
!!!	TATTTTTGTTATTTGGTCTC+TGG	-	chr7_2:49942559-49942578	Msa1061020:intron	25.0%
!	TAGCATACAATTTCATTTGA+AGG	-	chr7_2:49942689-49942708	Msa1061020:intron	25.0%
!	AGCATACAATTTCATTTGAA+GGG	-	chr7_2:49942690-49942709	Msa1061020:intron	25.0%
!	AAGATATCATAGTTTATGGA+TGG	-	chr7_2:49942731-49942750	Msa1061020:intron	25.0%
!	ATATATGGAAATTAGATGCA+TGG	-	chr7_2:49942923-49942942	Msa1061020:CDS	25.0%
!	TATATGGAAATTAGATGCAT+GGG	-	chr7_2:49942924-49942943	Msa1061020:CDS	25.0%
!	TTATTGCATGAGAAAAAACA+GGG	+	chr7_2:49943396-49943415	None:intergenic	25.0%
!	TTTATTGCATGAGAAAAAAC+AGG	+	chr7_2:49943397-49943416	None:intergenic	25.0%
!	TGATCTCAATATGTATATAC+AGG	+	chr7_2:49943431-49943450	None:intergenic	25.0%
!	TGTTTCATGAATATAATAGG+TGG	-	chr7_2:49943475-49943494	Msa1061020:intron	25.0%
!!	TTGGAGTAGAAGAAATATTT+TGG	-	chr7_2:49943613-49943632	Msa1061020:intron	25.0%
!	AAACATCTACCAAATATTCA+TGG	+	chr7_2:49943645-49943664	None:intergenic	25.0%
!!!	GTAGATGTTTTTAGATTACT+TGG	-	chr7_2:49943655-49943674	Msa1061020:intron	25.0%
!	ATTACTTGGATGATATTACT+TGG	-	chr7_2:49943669-49943688	Msa1061020:intron	25.0%
!	TGCACAAAGTTCTTTAAATT+TGG	+	chr7_2:49943727-49943746	None:intergenic	25.0%
!!!	AATATCATTTGCTGATTTAC+AGG	-	chr7_2:49943971-49943990	Msa1061020:CDS	25.0%
	ATTGGTTATGGAAGTTGAAT+TGG	-	chr7_2:49942477-49942496	Msa1061020:three_prime_UTR	30.0%
	ATAGTTTATGGATGGTTAAC+AGG	-	chr7_2:49942739-49942758	Msa1061020:intron	30.0%
!	TTTGTGGTCATCAATTTTGA+TGG	-	chr7_2:49942763-49942782	Msa1061020:intron	30.0%
	ATAGTGTATGGATGGTTAAT+AGG	-	chr7_2:49942812-49942831	Msa1061020:intron	30.0%
!!!	TAGGTTTTGATTTGTTCCTT+TGG	-	chr7_2:49942831-49942850	Msa1061020:intron	30.0%
	TCATATCCTAGTTTCCTAAT+GGG	+	chr7_2:49942883-49942902	None:intergenic	30.0%
	TTCATATCCTAGTTTCCTAA+TGG	+	chr7_2:49942884-49942903	None:intergenic	30.0%
	TACTGACAGAGAAAGATATA+TGG	-	chr7_2:49942908-49942927	Msa1061020:intron	30.0%
!!	TGATTTGTTTAGAACATTCG+AGG	-	chr7_2:49942986-49943005	Msa1061020:CDS	30.0%
	AGAATTTGATCATGCAGAAA+AGG	-	chr7_2:49943048-49943067	Msa1061020:intron	30.0%
	GAATTTGATCATGCAGAAAA+GGG	-	chr7_2:49943049-49943068	Msa1061020:intron	30.0%
	AACAAGGCAAATGAAAATAG+AGG	+	chr7_2:49943100-49943119	None:intergenic	30.0%
	AAACAGAGGGAAAAAAAACA+AGG	+	chr7_2:49943116-49943135	None:intergenic	30.0%
!!!	TTTTTGTTTTGATTCAGCCA+TGG	-	chr7_2:49943282-49943301	Msa1061020:intron	30.0%
	TCGTAACAATGATCCTTAAT+TGG	-	chr7_2:49943502-49943521	Msa1061020:intron	30.0%
	TGGTTGTATCCATGAATATT+TGG	-	chr7_2:49943633-49943652	Msa1061020:intron	30.0%
!!	TAAATTTGGAGTTTTCGACA+CGG	+	chr7_2:49943713-49943732	None:intergenic	30.0%
	AAGTAATTCAACATCAAGAG+AGG	+	chr7_2:49944096-49944115	None:intergenic	30.0%
	ATTGGTTATGGAAGTTGAAT+TGG	-	chr7_2:49942477-49942496	Msa1061020:three_prime_UTR	30.0%
	ATAGTTTATGGATGGTTAAC+AGG	-	chr7_2:49942739-49942758	Msa1061020:intron	30.0%
!	TTTGTGGTCATCAATTTTGA+TGG	-	chr7_2:49942763-49942782	Msa1061020:intron	30.0%
	ATAGTGTATGGATGGTTAAT+AGG	-	chr7_2:49942812-49942831	Msa1061020:intron	30.0%
!!!	TAGGTTTTGATTTGTTCCTT+TGG	-	chr7_2:49942831-49942850	Msa1061020:intron	30.0%
	TCATATCCTAGTTTCCTAAT+GGG	+	chr7_2:49942883-49942902	None:intergenic	30.0%
	TTCATATCCTAGTTTCCTAA+TGG	+	chr7_2:49942884-49942903	None:intergenic	30.0%
	TACTGACAGAGAAAGATATA+TGG	-	chr7_2:49942908-49942927	Msa1061020:intron	30.0%
!!	TGATTTGTTTAGAACATTCG+AGG	-	chr7_2:49942986-49943005	Msa1061020:CDS	30.0%
	AGAATTTGATCATGCAGAAA+AGG	-	chr7_2:49943048-49943067	Msa1061020:intron	30.0%
	GAATTTGATCATGCAGAAAA+GGG	-	chr7_2:49943049-49943068	Msa1061020:intron	30.0%
	AACAAGGCAAATGAAAATAG+AGG	+	chr7_2:49943100-49943119	None:intergenic	30.0%
	AAACAGAGGGAAAAAAAACA+AGG	+	chr7_2:49943116-49943135	None:intergenic	30.0%
!!!	TTTTTGTTTTGATTCAGCCA+TGG	-	chr7_2:49943282-49943301	Msa1061020:intron	30.0%
	TCGTAACAATGATCCTTAAT+TGG	-	chr7_2:49943502-49943521	Msa1061020:intron	30.0%
	TGGTTGTATCCATGAATATT+TGG	-	chr7_2:49943633-49943652	Msa1061020:intron	30.0%
!!	TAAATTTGGAGTTTTCGACA+CGG	+	chr7_2:49943713-49943732	None:intergenic	30.0%
	AAGTAATTCAACATCAAGAG+AGG	+	chr7_2:49944096-49944115	None:intergenic	30.0%
!	AGAAGGATGCAATTGATGAT+TGG	+	chr7_2:49942083-49942102	None:intergenic	35.0%
	ACATGCAGTAACTCTGTTAA+TGG	-	chr7_2:49942587-49942606	Msa1061020:intron	35.0%
	CTCTGTTCATTCATAGTGTA+TGG	-	chr7_2:49942800-49942819	Msa1061020:intron	35.0%
	GTTCATTCATAGTGTATGGA+TGG	-	chr7_2:49942804-49942823	Msa1061020:intron	35.0%
!!!	TTTTGATTTGTTCCTTTGGC+AGG	-	chr7_2:49942835-49942854	Msa1061020:intron	35.0%
!!	TTTGATTTGTTCCTTTGGCA+GGG	-	chr7_2:49942836-49942855	Msa1061020:intron	35.0%
	TTTCTTGGATGAATCCCATT+AGG	-	chr7_2:49942866-49942885	Msa1061020:intron	35.0%
	ATGAATCCCATTAGGAAACT+AGG	-	chr7_2:49942874-49942893	Msa1061020:intron	35.0%
!	TTTGTTTAGAACATTCGAGG+TGG	-	chr7_2:49942989-49943008	Msa1061020:intron	35.0%
	TCTGCATGATCAAATTCTGA+GGG	+	chr7_2:49943046-49943065	None:intergenic	35.0%
	TTCTGCATGATCAAATTCTG+AGG	+	chr7_2:49943047-49943066	None:intergenic	35.0%
!!	TTTTGATTCAGCCATGGAAT+TGG	-	chr7_2:49943288-49943307	Msa1061020:intron	35.0%
	ATCCAAATACAGAGAGAAAG+AGG	+	chr7_2:49943368-49943387	None:intergenic	35.0%
	CAGAGATTGTTTCAACATTG+TGG	-	chr7_2:49943745-49943764	Msa1061020:intron	35.0%
	ATTGTTTCAACATTGTGGAC+AGG	-	chr7_2:49943750-49943769	Msa1061020:intron	35.0%
	AAAGCTAAGTCAATGAAGAG+AGG	+	chr7_2:49943781-49943800	None:intergenic	35.0%
	GCCTTCAAAACAAGTGAATA+TGG	-	chr7_2:49943993-49944012	Msa1061020:CDS	35.0%
!!!	GCCATATTCACTTGTTTTGA+AGG	+	chr7_2:49943997-49944016	None:intergenic	35.0%
	AAATTCCAGTTACGTAGCAT+GGG	+	chr7_2:49944026-49944045	None:intergenic	35.0%
!	AGAAGGATGCAATTGATGAT+TGG	+	chr7_2:49942083-49942102	None:intergenic	35.0%
	ACATGCAGTAACTCTGTTAA+TGG	-	chr7_2:49942587-49942606	Msa1061020:intron	35.0%
	CTCTGTTCATTCATAGTGTA+TGG	-	chr7_2:49942800-49942819	Msa1061020:intron	35.0%
	GTTCATTCATAGTGTATGGA+TGG	-	chr7_2:49942804-49942823	Msa1061020:intron	35.0%
!!!	TTTTGATTTGTTCCTTTGGC+AGG	-	chr7_2:49942835-49942854	Msa1061020:intron	35.0%
!!	TTTGATTTGTTCCTTTGGCA+GGG	-	chr7_2:49942836-49942855	Msa1061020:intron	35.0%
	TTTCTTGGATGAATCCCATT+AGG	-	chr7_2:49942866-49942885	Msa1061020:intron	35.0%
	ATGAATCCCATTAGGAAACT+AGG	-	chr7_2:49942874-49942893	Msa1061020:intron	35.0%
!	TTTGTTTAGAACATTCGAGG+TGG	-	chr7_2:49942989-49943008	Msa1061020:intron	35.0%
	TCTGCATGATCAAATTCTGA+GGG	+	chr7_2:49943046-49943065	None:intergenic	35.0%
	TTCTGCATGATCAAATTCTG+AGG	+	chr7_2:49943047-49943066	None:intergenic	35.0%
!!	TTTTGATTCAGCCATGGAAT+TGG	-	chr7_2:49943288-49943307	Msa1061020:intron	35.0%
	ATCCAAATACAGAGAGAAAG+AGG	+	chr7_2:49943368-49943387	None:intergenic	35.0%
	CAGAGATTGTTTCAACATTG+TGG	-	chr7_2:49943745-49943764	Msa1061020:intron	35.0%
	ATTGTTTCAACATTGTGGAC+AGG	-	chr7_2:49943750-49943769	Msa1061020:intron	35.0%
	AAAGCTAAGTCAATGAAGAG+AGG	+	chr7_2:49943781-49943800	None:intergenic	35.0%
	GCCTTCAAAACAAGTGAATA+TGG	-	chr7_2:49943993-49944012	Msa1061020:CDS	35.0%
!!!	GCCATATTCACTTGTTTTGA+AGG	+	chr7_2:49943997-49944016	None:intergenic	35.0%
	AAATTCCAGTTACGTAGCAT+GGG	+	chr7_2:49944026-49944045	None:intergenic	35.0%
	TCATCAATTGCATCCTTCTG+TGG	-	chr7_2:49942084-49942103	Msa1061020:intron	40.0%
	GGAGATTGAGAAGTTTCGAT+CGG	+	chr7_2:49942162-49942181	None:intergenic	40.0%
!	ATCGCTGATTGAATTGCGAT+CGG	+	chr7_2:49942231-49942250	None:intergenic	40.0%
!	TGGATGGTTAACAGGTTTTG+TGG	-	chr7_2:49942747-49942766	Msa1061020:intron	40.0%
	GAAAAAACTATCCCTGCCAA+AGG	+	chr7_2:49942850-49942869	None:intergenic	40.0%
!!!	TGGCAGGGATAGTTTTTTCT+TGG	-	chr7_2:49942851-49942870	Msa1061020:intron	40.0%
!	CATGATCAAATTCTGAGGGA+GGG	+	chr7_2:49943042-49943061	None:intergenic	40.0%
	GAAAAGGGAGATGCATTGTA+TGG	-	chr7_2:49943064-49943083	Msa1061020:intron	40.0%
	TGCCTCTTTCTCTCTGTATT+TGG	-	chr7_2:49943363-49943382	Msa1061020:intron	40.0%
	TCGATGAAGTCTGCCAATTA+AGG	+	chr7_2:49943518-49943537	None:intergenic	40.0%
!!	ATTGACTTAGCTTTGCTCGT+TGG	-	chr7_2:49943787-49943806	Msa1061020:intron	40.0%
!	GGCTTTGGTGTAACATTGAA+GGG	+	chr7_2:49943816-49943835	None:intergenic	40.0%
	GAAATTCCAGTTACGTAGCA+TGG	+	chr7_2:49944027-49944046	None:intergenic	40.0%
	CTAAACACATGTCCCTCAAA+AGG	+	chr7_2:49944073-49944092	None:intergenic	40.0%
	TCATCAATTGCATCCTTCTG+TGG	-	chr7_2:49942084-49942103	Msa1061020:intron	40.0%
	GGAGATTGAGAAGTTTCGAT+CGG	+	chr7_2:49942162-49942181	None:intergenic	40.0%
!	ATCGCTGATTGAATTGCGAT+CGG	+	chr7_2:49942231-49942250	None:intergenic	40.0%
!	TGGATGGTTAACAGGTTTTG+TGG	-	chr7_2:49942747-49942766	Msa1061020:intron	40.0%
	GAAAAAACTATCCCTGCCAA+AGG	+	chr7_2:49942850-49942869	None:intergenic	40.0%
!!!	TGGCAGGGATAGTTTTTTCT+TGG	-	chr7_2:49942851-49942870	Msa1061020:intron	40.0%
!	CATGATCAAATTCTGAGGGA+GGG	+	chr7_2:49943042-49943061	None:intergenic	40.0%
	GAAAAGGGAGATGCATTGTA+TGG	-	chr7_2:49943064-49943083	Msa1061020:intron	40.0%
	TGCCTCTTTCTCTCTGTATT+TGG	-	chr7_2:49943363-49943382	Msa1061020:intron	40.0%
	TCGATGAAGTCTGCCAATTA+AGG	+	chr7_2:49943518-49943537	None:intergenic	40.0%
!!	ATTGACTTAGCTTTGCTCGT+TGG	-	chr7_2:49943787-49943806	Msa1061020:intron	40.0%
!	GGCTTTGGTGTAACATTGAA+GGG	+	chr7_2:49943816-49943835	None:intergenic	40.0%
	GAAATTCCAGTTACGTAGCA+TGG	+	chr7_2:49944027-49944046	None:intergenic	40.0%
	CTAAACACATGTCCCTCAAA+AGG	+	chr7_2:49944073-49944092	None:intergenic	40.0%
	TCAATTGCATCCTTCTGTGG+TGG	-	chr7_2:49942087-49942106	Msa1061020:intron	45.0%
	TGAGAAGTTTCGATCGGAAG+AGG	+	chr7_2:49942156-49942175	None:intergenic	45.0%
!	GCATGATCAAATTCTGAGGG+AGG	+	chr7_2:49943043-49943062	None:intergenic	45.0%
	TCCAAAGACAGCCAATTCCA+TGG	+	chr7_2:49943302-49943321	None:intergenic	45.0%
!	CTTCATCGAGAGCGAGTTTT+TGG	-	chr7_2:49943529-49943548	Msa1061020:intron	45.0%
!	GGGCTTTGGTGTAACATTGA+AGG	+	chr7_2:49943817-49943836	None:intergenic	45.0%
	TCTTCACAAGGGAGGATCTT+TGG	+	chr7_2:49943850-49943869	None:intergenic	45.0%
	CTGCCTAGACTTCTTCACAA+GGG	+	chr7_2:49943861-49943880	None:intergenic	45.0%
	TCTGCCTAGACTTCTTCACA+AGG	+	chr7_2:49943862-49943881	None:intergenic	45.0%
	TCAATTGCATCCTTCTGTGG+TGG	-	chr7_2:49942087-49942106	Msa1061020:intron	45.0%
	TGAGAAGTTTCGATCGGAAG+AGG	+	chr7_2:49942156-49942175	None:intergenic	45.0%
!	GCATGATCAAATTCTGAGGG+AGG	+	chr7_2:49943043-49943062	None:intergenic	45.0%
	TCCAAAGACAGCCAATTCCA+TGG	+	chr7_2:49943302-49943321	None:intergenic	45.0%
!	CTTCATCGAGAGCGAGTTTT+TGG	-	chr7_2:49943529-49943548	Msa1061020:intron	45.0%
!	GGGCTTTGGTGTAACATTGA+AGG	+	chr7_2:49943817-49943836	None:intergenic	45.0%
	TCTTCACAAGGGAGGATCTT+TGG	+	chr7_2:49943850-49943869	None:intergenic	45.0%
	CTGCCTAGACTTCTTCACAA+GGG	+	chr7_2:49943861-49943880	None:intergenic	45.0%
	TCTGCCTAGACTTCTTCACA+AGG	+	chr7_2:49943862-49943881	None:intergenic	45.0%
!!!	AATTAAATATTTTTGTTATT+TGG	-	chr7_2:49942552-49942571	Msa1061020:intron	5.0%
!!!	AATTAAATATTTTTGTTATT+TGG	-	chr7_2:49942552-49942571	Msa1061020:intron	5.0%
!!	TCGGAGATGGTGGAAGAAGA+GGG	+	chr7_2:49941938-49941957	None:intergenic	50.0%
!!	ATCGGAGATGGTGGAAGAAG+AGG	+	chr7_2:49941939-49941958	None:intergenic	50.0%
	ACAGAGGAGGATACGTCGAT+CGG	+	chr7_2:49941957-49941976	None:intergenic	50.0%
!	GGATTGACGGTGGGTTTGAT+CGG	+	chr7_2:49942014-49942033	None:intergenic	50.0%
	ATCCACCGGAGAAGGATTGA+CGG	+	chr7_2:49942027-49942046	None:intergenic	50.0%
	TGATCGATCGCATCCTTCTC+TGG	-	chr7_2:49942050-49942069	Msa1061020:intron	50.0%
	GATTGGAGATCCACCAGAGA+AGG	+	chr7_2:49942066-49942085	None:intergenic	50.0%
	GATCAGAGATCCACCACAGA+AGG	+	chr7_2:49942100-49942119	None:intergenic	50.0%
	GATCTCTGATCGATCTGCAC+CGG	-	chr7_2:49942109-49942128	Msa1061020:three_prime_UTR	50.0%
	TGAATTGCGATCGGAGACTC+AGG	+	chr7_2:49942222-49942241	None:intergenic	50.0%
	GAACATTCGAGGTGGAAGAG+TGG	-	chr7_2:49942997-49943016	Msa1061020:intron	50.0%
	GCCATGGAATTGGCTGTCTT+TGG	-	chr7_2:49943298-49943317	Msa1061020:intron	50.0%
!!!	GAGCGAGTTTTTGGTAGAGC+AGG	-	chr7_2:49943538-49943557	Msa1061020:intron	50.0%
!!	AGGGAGGATCTTTGGAGTGT+GGG	+	chr7_2:49943842-49943861	None:intergenic	50.0%
!!	AAGGGAGGATCTTTGGAGTG+TGG	+	chr7_2:49943843-49943862	None:intergenic	50.0%
	CCTAGACTTCTTCACAAGGG+AGG	+	chr7_2:49943858-49943877	None:intergenic	50.0%
	CCTCCCTTGTGAAGAAGTCT+AGG	-	chr7_2:49943855-49943874	Msa1061020:intron	50.0%
	CTGAACCCATGCTACGTAAC+TGG	-	chr7_2:49944018-49944037	Msa1061020:CDS	50.0%
!!	TCGGAGATGGTGGAAGAAGA+GGG	+	chr7_2:49941938-49941957	None:intergenic	50.0%
!!	ATCGGAGATGGTGGAAGAAG+AGG	+	chr7_2:49941939-49941958	None:intergenic	50.0%
	ACAGAGGAGGATACGTCGAT+CGG	+	chr7_2:49941957-49941976	None:intergenic	50.0%
!	GGATTGACGGTGGGTTTGAT+CGG	+	chr7_2:49942014-49942033	None:intergenic	50.0%
	ATCCACCGGAGAAGGATTGA+CGG	+	chr7_2:49942027-49942046	None:intergenic	50.0%
	TGATCGATCGCATCCTTCTC+TGG	-	chr7_2:49942050-49942069	Msa1061020:intron	50.0%
	GATTGGAGATCCACCAGAGA+AGG	+	chr7_2:49942066-49942085	None:intergenic	50.0%
	GATCAGAGATCCACCACAGA+AGG	+	chr7_2:49942100-49942119	None:intergenic	50.0%
	GATCTCTGATCGATCTGCAC+CGG	-	chr7_2:49942109-49942128	Msa1061020:three_prime_UTR	50.0%
	TGAATTGCGATCGGAGACTC+AGG	+	chr7_2:49942222-49942241	None:intergenic	50.0%
	GAACATTCGAGGTGGAAGAG+TGG	-	chr7_2:49942997-49943016	Msa1061020:intron	50.0%
	GCCATGGAATTGGCTGTCTT+TGG	-	chr7_2:49943298-49943317	Msa1061020:intron	50.0%
!!!	GAGCGAGTTTTTGGTAGAGC+AGG	-	chr7_2:49943538-49943557	Msa1061020:intron	50.0%
!!	AGGGAGGATCTTTGGAGTGT+GGG	+	chr7_2:49943842-49943861	None:intergenic	50.0%
!!	AAGGGAGGATCTTTGGAGTG+TGG	+	chr7_2:49943843-49943862	None:intergenic	50.0%
	CCTAGACTTCTTCACAAGGG+AGG	+	chr7_2:49943858-49943877	None:intergenic	50.0%
	CCTCCCTTGTGAAGAAGTCT+AGG	-	chr7_2:49943855-49943874	Msa1061020:intron	50.0%
	CTGAACCCATGCTACGTAAC+TGG	-	chr7_2:49944018-49944037	Msa1061020:CDS	50.0%
	GATACGTCGATCGGAGATGG+TGG	+	chr7_2:49941948-49941967	None:intergenic	55.0%
	GAGGATACGTCGATCGGAGA+TGG	+	chr7_2:49941951-49941970	None:intergenic	55.0%
!	TCCTCCTCTGTCTCTAGCTC+CGG	-	chr7_2:49941966-49941985	Msa1061020:three_prime_UTR	55.0%
	CGGAGGAGATAGAGATCCAC+CGG	+	chr7_2:49941988-49942007	None:intergenic	55.0%
!	ACGGTGGGTTTGATCGGAGA+CGG	+	chr7_2:49942008-49942027	None:intergenic	55.0%
	ACCCACCGTCAATCCTTCTC+CGG	-	chr7_2:49942019-49942038	Msa1061020:intron	55.0%
	ACCGGAGAAGGATTGACGGT+GGG	+	chr7_2:49942023-49942042	None:intergenic	55.0%
	GATCAGAGATCCACCGGAGA+AGG	+	chr7_2:49942035-49942054	None:intergenic	55.0%
	GCGATCGATCAGAGATCCAC+CGG	+	chr7_2:49942041-49942060	None:intergenic	55.0%
	TCGATCGCATCCTTCTCTGG+TGG	-	chr7_2:49942053-49942072	Msa1061020:intron	55.0%
	GCGATCAACCAGAGATCCAC+CGG	+	chr7_2:49942131-49942150	None:intergenic	55.0%
	CAGGAGGATGCCATCGAAGA+CGG	+	chr7_2:49942203-49942222	None:intergenic	55.0%
	ATTGCGATCGGAGACTCAGG+AGG	+	chr7_2:49942219-49942238	None:intergenic	55.0%
	CTGAGGGAGGGCTCACAATA+GGG	+	chr7_2:49943030-49943049	None:intergenic	55.0%
	TCTGAGGGAGGGCTCACAAT+AGG	+	chr7_2:49943031-49943050	None:intergenic	55.0%
!!	GGATCTTTGGAGTGTGGGCA+GGG	+	chr7_2:49943837-49943856	None:intergenic	55.0%
!!	AGGATCTTTGGAGTGTGGGC+AGG	+	chr7_2:49943838-49943857	None:intergenic	55.0%
	CTAGGCAGAAGCCTCAAGAG+CGG	-	chr7_2:49943873-49943892	Msa1061020:intron	55.0%
	AGAAGCCTCAAGAGCGGATG+AGG	-	chr7_2:49943879-49943898	Msa1061020:intron	55.0%
	GAAGCCTCAAGAGCGGATGA+GGG	-	chr7_2:49943880-49943899	Msa1061020:intron	55.0%
	AAGACCCTCATCCGCTCTTG+AGG	+	chr7_2:49943887-49943906	None:intergenic	55.0%
	AGAGCGGATGAGGGTCTTGA+CGG	-	chr7_2:49943889-49943908	Msa1061020:intron	55.0%
	GATACGTCGATCGGAGATGG+TGG	+	chr7_2:49941948-49941967	None:intergenic	55.0%
	GAGGATACGTCGATCGGAGA+TGG	+	chr7_2:49941951-49941970	None:intergenic	55.0%
!	TCCTCCTCTGTCTCTAGCTC+CGG	-	chr7_2:49941966-49941985	Msa1061020:three_prime_UTR	55.0%
	CGGAGGAGATAGAGATCCAC+CGG	+	chr7_2:49941988-49942007	None:intergenic	55.0%
!	ACGGTGGGTTTGATCGGAGA+CGG	+	chr7_2:49942008-49942027	None:intergenic	55.0%
	ACCCACCGTCAATCCTTCTC+CGG	-	chr7_2:49942019-49942038	Msa1061020:intron	55.0%
	ACCGGAGAAGGATTGACGGT+GGG	+	chr7_2:49942023-49942042	None:intergenic	55.0%
	GATCAGAGATCCACCGGAGA+AGG	+	chr7_2:49942035-49942054	None:intergenic	55.0%
	GCGATCGATCAGAGATCCAC+CGG	+	chr7_2:49942041-49942060	None:intergenic	55.0%
	TCGATCGCATCCTTCTCTGG+TGG	-	chr7_2:49942053-49942072	Msa1061020:intron	55.0%
	GCGATCAACCAGAGATCCAC+CGG	+	chr7_2:49942131-49942150	None:intergenic	55.0%
	CAGGAGGATGCCATCGAAGA+CGG	+	chr7_2:49942203-49942222	None:intergenic	55.0%
	ATTGCGATCGGAGACTCAGG+AGG	+	chr7_2:49942219-49942238	None:intergenic	55.0%
	CTGAGGGAGGGCTCACAATA+GGG	+	chr7_2:49943030-49943049	None:intergenic	55.0%
	TCTGAGGGAGGGCTCACAAT+AGG	+	chr7_2:49943031-49943050	None:intergenic	55.0%
!!	GGATCTTTGGAGTGTGGGCA+GGG	+	chr7_2:49943837-49943856	None:intergenic	55.0%
!!	AGGATCTTTGGAGTGTGGGC+AGG	+	chr7_2:49943838-49943857	None:intergenic	55.0%
	CTAGGCAGAAGCCTCAAGAG+CGG	-	chr7_2:49943873-49943892	Msa1061020:intron	55.0%
	AGAAGCCTCAAGAGCGGATG+AGG	-	chr7_2:49943879-49943898	Msa1061020:intron	55.0%
	GAAGCCTCAAGAGCGGATGA+GGG	-	chr7_2:49943880-49943899	Msa1061020:intron	55.0%
	AAGACCCTCATCCGCTCTTG+AGG	+	chr7_2:49943887-49943906	None:intergenic	55.0%
	AGAGCGGATGAGGGTCTTGA+CGG	-	chr7_2:49943889-49943908	Msa1061020:intron	55.0%
!	TGGTGGAAGAAGAGGGCGCA+CGG	+	chr7_2:49941931-49941950	None:intergenic	60.0%
	ACCGGAGCTAGAGACAGAGG+AGG	+	chr7_2:49941970-49941989	None:intergenic	60.0%
!	TCCTCTGTCTCTAGCTCCGG+TGG	-	chr7_2:49941969-49941988	Msa1061020:three_prime_UTR	60.0%
	TCCACCGGAGCTAGAGACAG+AGG	+	chr7_2:49941973-49941992	None:intergenic	60.0%
	GTGGGTTTGATCGGAGACGG+AGG	+	chr7_2:49942005-49942024	None:intergenic	60.0%
	CACCGGAGAAGGATTGACGG+TGG	+	chr7_2:49942024-49942043	None:intergenic	60.0%
	CACCGTCAATCCTTCTCCGG+TGG	-	chr7_2:49942022-49942041	Msa1061020:intron	60.0%
	CTCTGATCGATCTGCACCGG+TGG	-	chr7_2:49942112-49942131	Msa1061020:three_prime_UTR	60.0%
!	GATCTGCACCGGTGGATCTC+TGG	-	chr7_2:49942120-49942139	Msa1061020:three_prime_UTR	60.0%
	CGGCGGAGGATGGGATTGTT+CGG	+	chr7_2:49942183-49942202	None:intergenic	60.0%
	CATCGAAGACGGCGGAGGAT+GGG	+	chr7_2:49942192-49942211	None:intergenic	60.0%
	GAGGATGCCATCGAAGACGG+CGG	+	chr7_2:49942200-49942219	None:intergenic	60.0%
!	AGATGCATGGGAGCGTGCAC+AGG	-	chr7_2:49942936-49942955	Msa1061020:CDS	60.0%
	TTGGAGTGTGGGCAGGGCTT+TGG	+	chr7_2:49943831-49943850	None:intergenic	60.0%
!	TGGTGGAAGAAGAGGGCGCA+CGG	+	chr7_2:49941931-49941950	None:intergenic	60.0%
	ACCGGAGCTAGAGACAGAGG+AGG	+	chr7_2:49941970-49941989	None:intergenic	60.0%
!	TCCTCTGTCTCTAGCTCCGG+TGG	-	chr7_2:49941969-49941988	Msa1061020:three_prime_UTR	60.0%
	TCCACCGGAGCTAGAGACAG+AGG	+	chr7_2:49941973-49941992	None:intergenic	60.0%
	GTGGGTTTGATCGGAGACGG+AGG	+	chr7_2:49942005-49942024	None:intergenic	60.0%
	CACCGGAGAAGGATTGACGG+TGG	+	chr7_2:49942024-49942043	None:intergenic	60.0%
	CACCGTCAATCCTTCTCCGG+TGG	-	chr7_2:49942022-49942041	Msa1061020:intron	60.0%
	CTCTGATCGATCTGCACCGG+TGG	-	chr7_2:49942112-49942131	Msa1061020:three_prime_UTR	60.0%
!	GATCTGCACCGGTGGATCTC+TGG	-	chr7_2:49942120-49942139	Msa1061020:three_prime_UTR	60.0%
	CGGCGGAGGATGGGATTGTT+CGG	+	chr7_2:49942183-49942202	None:intergenic	60.0%
	CATCGAAGACGGCGGAGGAT+GGG	+	chr7_2:49942192-49942211	None:intergenic	60.0%
	GAGGATGCCATCGAAGACGG+CGG	+	chr7_2:49942200-49942219	None:intergenic	60.0%
!	AGATGCATGGGAGCGTGCAC+AGG	-	chr7_2:49942936-49942955	Msa1061020:CDS	60.0%
	TTGGAGTGTGGGCAGGGCTT+TGG	+	chr7_2:49943831-49943850	None:intergenic	60.0%
	GCGCACGGAGGAAGTGATGG+TGG	+	chr7_2:49941916-49941935	None:intergenic	65.0%
	AGGGCGCACGGAGGAAGTGA+TGG	+	chr7_2:49941919-49941938	None:intergenic	65.0%
!	TGGAAGAAGAGGGCGCACGG+AGG	+	chr7_2:49941928-49941947	None:intergenic	65.0%
	CCATCGAAGACGGCGGAGGA+TGG	+	chr7_2:49942193-49942212	None:intergenic	65.0%
	CCATCCTCCGCCGTCTTCGA+TGG	-	chr7_2:49942190-49942209	Msa1061020:three_prime_UTR	65.0%
	GATGCCATCGAAGACGGCGG+AGG	+	chr7_2:49942197-49942216	None:intergenic	65.0%
	GCGCACGGAGGAAGTGATGG+TGG	+	chr7_2:49941916-49941935	None:intergenic	65.0%
	AGGGCGCACGGAGGAAGTGA+TGG	+	chr7_2:49941919-49941938	None:intergenic	65.0%
!	TGGAAGAAGAGGGCGCACGG+AGG	+	chr7_2:49941928-49941947	None:intergenic	65.0%
	CCATCGAAGACGGCGGAGGA+TGG	+	chr7_2:49942193-49942212	None:intergenic	65.0%
	CCATCCTCCGCCGTCTTCGA+TGG	-	chr7_2:49942190-49942209	Msa1061020:three_prime_UTR	65.0%
	GATGCCATCGAAGACGGCGG+AGG	+	chr7_2:49942197-49942216	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr7_2	gene	49941867	49944137	49941867	ID=Msa1061020;Name=Msa1061020
chr7_2	mRNA	49941867	49944137	49941867	ID=Msa1061020-mRNA-1;Parent=Msa1061020;Name=Msa1061020-mRNA-1;_AED=0.17;_eAED=0.30;_QI=0\|0.75\|0.6\|1\|0.25\|0.4\|5\|587\|99
chr7_2	exon	49941867	49942011	49941867	ID=Msa1061020-mRNA-1:exon:9020;Parent=Msa1061020-mRNA-1
chr7_2	exon	49942091	49942510	49942091	ID=Msa1061020-mRNA-1:exon:9019;Parent=Msa1061020-mRNA-1
chr7_2	exon	49942646	49942705	49942646	ID=Msa1061020-mRNA-1:exon:9018;Parent=Msa1061020-mRNA-1
chr7_2	exon	49942919	49943006	49942919	ID=Msa1061020-mRNA-1:exon:9017;Parent=Msa1061020-mRNA-1
chr7_2	exon	49943964	49944137	49943964	ID=Msa1061020-mRNA-1:exon:9016;Parent=Msa1061020-mRNA-1
chr7_2	CDS	49943964	49944137	49943964	ID=Msa1061020-mRNA-1:cds;Parent=Msa1061020-mRNA-1
chr7_2	CDS	49942919	49943006	49942919	ID=Msa1061020-mRNA-1:cds;Parent=Msa1061020-mRNA-1
chr7_2	CDS	49942668	49942705	49942668	ID=Msa1061020-mRNA-1:cds;Parent=Msa1061020-mRNA-1
chr7_2	three_prime_UTR	49942646	49942667	49942646	ID=Msa1061020-mRNA-1:three_prime_utr;Parent=Msa1061020-mRNA-1
chr7_2	three_prime_UTR	49942091	49942510	49942091	ID=Msa1061020-mRNA-1:three_prime_utr;Parent=Msa1061020-mRNA-1
chr7_2	three_prime_UTR	49941867	49942011	49941867	ID=Msa1061020-mRNA-1:three_prime_utr;Parent=Msa1061020-mRNA-1

Gene Sequence	>Msa1061020 ATTAAAATATTATTTTATATACAATTTTCACAATTTCGTGTTTCTTCCACCATCACTTCCTCCGTGCGCCCTCTTCTTCCACCATCTCCGATCGACGTATCCTCCTCTGTCTCTAGCTCCGGTGGATCTCTATCTCCTCCGTCTCCGATCAAACCCACCGTCAATCCTTCTCCGAACATTCGAGGTGGAAGAGTGGTGCTGCACCCTATTGTGAGCCCTCCCTCAGAATTTGATCATGCAGAAAAGGGAGATGCATTGTATGCCATGGAATTGGCTGTCTTTGGAGAAGTTAGTAAATGA
Protein sequence	>Msa1061020 IKILFYIQFSQFRVSSTITSSVRPLLPPSPIDVSSSVSSSGGSLSPPSPIKPTVNPSPNIRGGRVVLHPIVSPPSEFDHAEKGDALYAMELAVFGEVSK*