Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1192130 | XP_016736213.1 | 100.000 | 152 | 0 | 0 | 1 | 152 | 27 | 178 | 1.03e-109 | 319 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1192130 | sp|P42745|UBC2_ARATH | 97.368 | 152 | 4 | 0 | 1 | 152 | 1 | 152 | 1.87e-110 | 313 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0388960 | Msa1192130 | -0.801758 | 7.742383e-49 | -8.615850e-47 |
Msa1061020 | Msa1192130 | 0.815268 | 1.008704e-51 | -8.615850e-47 |
Msa1061060 | Msa1192130 | 0.841250 | 5.324170e-58 | -8.615850e-47 |
Msa1192130 | Msa1247520 | 0.986623 | 2.064684e-167 | -8.615850e-47 |
Msa1192130 | Msa1313150 | -0.806438 | 8.225455e-50 | -8.615850e-47 |
Msa1192130 | Msa1423880 | -0.801535 | 8.602028e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1192130 | MtrunA17_Chr8g0362321 | 100.000 | 152 | 0 | 0 | 1 | 152 | 1 | 152 | 3.05e-113 | 317 |
Msa1192130 | MtrunA17_Chr4g0060351 | 97.368 | 152 | 4 | 0 | 1 | 152 | 1 | 152 | 1.53e-111 | 313 |
Msa1192130 | MtrunA17_Chr7g0275361 | 45.890 | 146 | 74 | 1 | 5 | 150 | 2 | 142 | 1.45e-45 | 145 |
Msa1192130 | MtrunA17_Chr1g0154011 | 46.575 | 146 | 73 | 1 | 5 | 150 | 2 | 142 | 1.97e-45 | 145 |
Msa1192130 | MtrunA17_Chr5g0432831 | 45.205 | 146 | 75 | 1 | 5 | 150 | 2 | 142 | 4.14e-45 | 144 |
Msa1192130 | MtrunA17_Chr3g0108261 | 45.205 | 146 | 75 | 1 | 5 | 150 | 2 | 142 | 4.77e-45 | 144 |
Msa1192130 | MtrunA17_Chr8g0369311 | 46.575 | 146 | 73 | 1 | 5 | 150 | 58 | 198 | 2.28e-44 | 144 |
Msa1192130 | MtrunA17_Chr4g0037011 | 45.205 | 146 | 75 | 1 | 5 | 150 | 2 | 142 | 2.86e-44 | 142 |
Msa1192130 | MtrunA17_Chr4g0038891 | 46.154 | 143 | 76 | 1 | 2 | 144 | 30 | 171 | 2.27e-40 | 133 |
Msa1192130 | MtrunA17_Chr5g0396451 | 44.928 | 138 | 75 | 1 | 7 | 144 | 35 | 171 | 1.61e-38 | 129 |
Msa1192130 | MtrunA17_Chr4g0053191 | 42.208 | 154 | 82 | 2 | 1 | 147 | 1 | 154 | 2.47e-38 | 127 |
Msa1192130 | MtrunA17_Chr2g0316201 | 40.146 | 137 | 82 | 0 | 7 | 143 | 8 | 144 | 2.84e-38 | 127 |
Msa1192130 | MtrunA17_Chr5g0401831 | 41.558 | 154 | 83 | 2 | 1 | 147 | 1 | 154 | 5.29e-38 | 127 |
Msa1192130 | MtrunA17_Chr2g0316211 | 41.085 | 129 | 76 | 0 | 8 | 136 | 9 | 137 | 3.75e-37 | 124 |
Msa1192130 | MtrunA17_Chr4g0031181 | 39.310 | 145 | 74 | 2 | 18 | 148 | 18 | 162 | 6.86e-35 | 119 |
Msa1192130 | MtrunA17_Chr3g0139901 | 38.732 | 142 | 83 | 3 | 5 | 142 | 4 | 145 | 1.28e-33 | 115 |
Msa1192130 | MtrunA17_Chr1g0199951 | 41.259 | 143 | 82 | 2 | 2 | 143 | 39 | 180 | 1.50e-32 | 114 |
Msa1192130 | MtrunA17_Chr2g0328001 | 36.496 | 137 | 74 | 1 | 25 | 148 | 26 | 162 | 5.12e-31 | 109 |
Msa1192130 | MtrunA17_Chr7g0254701 | 35.294 | 136 | 88 | 0 | 7 | 142 | 13 | 148 | 2.20e-29 | 108 |
Msa1192130 | MtrunA17_Chr8g0378601 | 34.848 | 132 | 86 | 0 | 7 | 138 | 25 | 156 | 4.01e-28 | 102 |
Msa1192130 | MtrunA17_Chr3g0131871 | 34.507 | 142 | 84 | 2 | 10 | 142 | 1 | 142 | 1.32e-26 | 99.0 |
Msa1192130 | MtrunA17_Chr8g0348701 | 30.201 | 149 | 98 | 3 | 1 | 147 | 1 | 145 | 1.35e-25 | 96.3 |
Msa1192130 | MtrunA17_Chr4g0059291 | 29.530 | 149 | 99 | 3 | 1 | 147 | 1 | 145 | 4.64e-25 | 94.7 |
Msa1192130 | MtrunA17_Chr8g0387131 | 32.000 | 150 | 94 | 4 | 1 | 147 | 1 | 145 | 2.15e-23 | 90.5 |
Msa1192130 | MtrunA17_Chr5g0403591 | 26.389 | 144 | 105 | 1 | 8 | 151 | 33 | 175 | 1.89e-20 | 82.8 |
Msa1192130 | MtrunA17_Chr8g0376111 | 32.857 | 140 | 82 | 4 | 7 | 134 | 43 | 182 | 5.18e-18 | 79.0 |
Msa1192130 | MtrunA17_Chr4g0045101 | 33.784 | 148 | 85 | 5 | 7 | 141 | 37 | 184 | 2.60e-17 | 77.0 |
Msa1192130 | MtrunA17_Chr7g0233611 | 33.571 | 140 | 81 | 4 | 7 | 134 | 38 | 177 | 2.84e-17 | 77.0 |
Msa1192130 | MtrunA17_Chr8g0372391 | 36.792 | 106 | 65 | 2 | 1 | 105 | 12 | 116 | 6.84e-17 | 73.2 |
Msa1192130 | MtrunA17_Chr7g0233631 | 31.410 | 156 | 89 | 5 | 7 | 150 | 38 | 187 | 7.03e-17 | 75.9 |
Msa1192130 | MtrunA17_Chr8g0345331 | 31.092 | 119 | 73 | 3 | 7 | 120 | 8 | 122 | 6.37e-16 | 72.0 |
Msa1192130 | MtrunA17_Chr5g0404931 | 35.849 | 106 | 66 | 2 | 1 | 105 | 12 | 116 | 8.39e-16 | 70.1 |
Msa1192130 | MtrunA17_Chr1g0198021 | 31.973 | 147 | 86 | 6 | 7 | 139 | 138 | 284 | 2.28e-12 | 63.2 |
Msa1192130 | MtrunA17_Chr4g0068301 | 29.457 | 129 | 81 | 4 | 1 | 124 | 7 | 130 | 3.90e-12 | 62.4 |
Msa1192130 | MtrunA17_Chr8g0376201 | 30.137 | 146 | 88 | 5 | 7 | 138 | 193 | 338 | 1.80e-11 | 60.8 |
Msa1192130 | MtrunA17_Chr2g0317631 | 31.250 | 128 | 76 | 5 | 7 | 122 | 307 | 434 | 3.08e-11 | 60.1 |
Msa1192130 | MtrunA17_Chr2g0282211 | 29.268 | 123 | 75 | 3 | 7 | 118 | 682 | 803 | 3.84e-11 | 60.1 |
Msa1192130 | MtrunA17_Chr7g0222941 | 28.689 | 122 | 77 | 3 | 7 | 118 | 91 | 212 | 5.80e-11 | 58.5 |
Msa1192130 | MtrunA17_Chr1g0211131 | 30.081 | 123 | 74 | 4 | 7 | 118 | 823 | 944 | 6.36e-11 | 59.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1192130 | AT2G02760.1 | 97.368 | 152 | 4 | 0 | 1 | 152 | 1 | 152 | 1.90e-111 | 313 |
Msa1192130 | AT2G02760.2 | 97.368 | 152 | 4 | 0 | 1 | 152 | 1 | 152 | 1.90e-111 | 313 |
Msa1192130 | AT2G02760.4 | 97.368 | 152 | 4 | 0 | 1 | 152 | 1 | 152 | 1.90e-111 | 313 |
Msa1192130 | AT2G02760.3 | 97.368 | 152 | 4 | 0 | 1 | 152 | 1 | 152 | 1.90e-111 | 313 |
Msa1192130 | AT1G14400.1 | 96.053 | 152 | 6 | 0 | 1 | 152 | 1 | 152 | 2.34e-110 | 310 |
Msa1192130 | AT1G14400.2 | 96.053 | 152 | 6 | 0 | 1 | 152 | 1 | 152 | 2.34e-110 | 310 |
Msa1192130 | AT5G62540.1 | 88.000 | 150 | 18 | 0 | 1 | 150 | 1 | 150 | 5.25e-100 | 284 |
Msa1192130 | AT4G27960.1 | 47.101 | 138 | 73 | 0 | 5 | 142 | 2 | 139 | 6.23e-46 | 147 |
Msa1192130 | AT1G64230.2 | 45.205 | 146 | 75 | 1 | 5 | 150 | 2 | 142 | 1.48e-45 | 146 |
Msa1192130 | AT1G64230.1 | 45.205 | 146 | 75 | 1 | 5 | 150 | 2 | 142 | 1.48e-45 | 146 |
Msa1192130 | AT5G53300.2 | 45.890 | 146 | 74 | 1 | 5 | 150 | 2 | 142 | 1.61e-45 | 146 |
Msa1192130 | AT5G53300.4 | 45.890 | 146 | 74 | 1 | 5 | 150 | 2 | 142 | 1.61e-45 | 146 |
Msa1192130 | AT5G53300.1 | 45.890 | 146 | 74 | 1 | 5 | 150 | 2 | 142 | 1.61e-45 | 146 |
Msa1192130 | AT4G27960.2 | 47.101 | 138 | 73 | 0 | 5 | 142 | 32 | 169 | 4.49e-45 | 145 |
Msa1192130 | AT5G41700.5 | 45.652 | 138 | 75 | 0 | 5 | 142 | 2 | 139 | 1.58e-44 | 143 |
Msa1192130 | AT5G41700.2 | 45.652 | 138 | 75 | 0 | 5 | 142 | 2 | 139 | 1.58e-44 | 143 |
Msa1192130 | AT5G41700.1 | 45.652 | 138 | 75 | 0 | 5 | 142 | 2 | 139 | 1.58e-44 | 143 |
Msa1192130 | AT3G08690.2 | 43.836 | 146 | 77 | 1 | 5 | 150 | 2 | 142 | 3.69e-44 | 142 |
Msa1192130 | AT3G08690.1 | 43.836 | 146 | 77 | 1 | 5 | 150 | 2 | 142 | 3.69e-44 | 142 |
Msa1192130 | AT2G16740.1 | 43.151 | 146 | 78 | 1 | 5 | 150 | 2 | 142 | 8.56e-44 | 141 |
Msa1192130 | AT5G56150.1 | 45.205 | 146 | 75 | 1 | 5 | 150 | 2 | 142 | 1.51e-43 | 141 |
Msa1192130 | AT3G08700.2 | 44.898 | 147 | 75 | 2 | 5 | 150 | 2 | 143 | 1.07e-42 | 139 |
Msa1192130 | AT3G08700.1 | 44.898 | 147 | 75 | 2 | 5 | 150 | 2 | 143 | 1.07e-42 | 139 |
Msa1192130 | AT1G64230.3 | 43.871 | 155 | 73 | 3 | 5 | 150 | 2 | 151 | 1.43e-42 | 139 |
Msa1192130 | AT5G41700.4 | 45.324 | 139 | 75 | 1 | 5 | 142 | 2 | 140 | 2.02e-42 | 138 |
Msa1192130 | AT3G20060.1 | 44.138 | 145 | 80 | 1 | 2 | 146 | 34 | 177 | 1.08e-38 | 129 |
Msa1192130 | AT1G16890.2 | 40.146 | 137 | 82 | 0 | 7 | 143 | 8 | 144 | 5.09e-38 | 127 |
Msa1192130 | AT1G78870.2 | 40.146 | 137 | 82 | 0 | 7 | 143 | 8 | 144 | 9.26e-38 | 126 |
Msa1192130 | AT1G50490.1 | 45.714 | 140 | 75 | 1 | 7 | 146 | 38 | 176 | 1.03e-37 | 127 |
Msa1192130 | AT1G64230.5 | 35.106 | 188 | 75 | 2 | 5 | 150 | 2 | 184 | 2.81e-37 | 126 |
Msa1192130 | AT1G64230.4 | 35.106 | 188 | 75 | 2 | 5 | 150 | 2 | 184 | 2.81e-37 | 126 |
Msa1192130 | AT3G20060.2 | 47.581 | 124 | 64 | 1 | 23 | 146 | 10 | 132 | 3.04e-37 | 124 |
Msa1192130 | AT3G57870.1 | 40.000 | 145 | 80 | 2 | 5 | 142 | 6 | 150 | 3.04e-35 | 120 |
Msa1192130 | AT1G16890.3 | 38.356 | 146 | 81 | 1 | 7 | 143 | 8 | 153 | 3.05e-35 | 120 |
Msa1192130 | AT5G59300.1 | 39.416 | 137 | 70 | 1 | 25 | 148 | 26 | 162 | 1.13e-33 | 116 |
Msa1192130 | AT5G41700.3 | 45.283 | 106 | 58 | 0 | 5 | 110 | 2 | 107 | 2.15e-33 | 115 |
Msa1192130 | AT5G53300.3 | 46.535 | 101 | 54 | 0 | 5 | 105 | 2 | 102 | 4.31e-33 | 113 |
Msa1192130 | AT3G46460.1 | 39.416 | 137 | 70 | 1 | 25 | 148 | 26 | 162 | 4.67e-33 | 115 |
Msa1192130 | AT5G25760.1 | 39.130 | 138 | 80 | 3 | 5 | 138 | 4 | 141 | 7.59e-33 | 114 |
Msa1192130 | AT5G25760.2 | 39.130 | 138 | 80 | 3 | 5 | 138 | 4 | 141 | 7.59e-33 | 114 |
Msa1192130 | AT3G55380.1 | 38.686 | 137 | 71 | 1 | 25 | 148 | 27 | 163 | 1.14e-32 | 114 |
Msa1192130 | AT5G56150.2 | 44.444 | 108 | 60 | 0 | 5 | 112 | 2 | 109 | 2.95e-32 | 111 |
Msa1192130 | AT3G13550.1 | 35.766 | 137 | 88 | 0 | 7 | 143 | 39 | 175 | 2.86e-31 | 110 |
Msa1192130 | AT5G05080.2 | 35.294 | 136 | 88 | 0 | 7 | 142 | 13 | 148 | 2.60e-30 | 110 |
Msa1192130 | AT5G05080.3 | 35.294 | 136 | 88 | 0 | 7 | 142 | 13 | 148 | 2.60e-30 | 110 |
Msa1192130 | AT5G05080.1 | 35.294 | 136 | 88 | 0 | 7 | 142 | 13 | 148 | 2.60e-30 | 110 |
Msa1192130 | AT5G05080.4 | 35.294 | 136 | 88 | 0 | 7 | 142 | 13 | 148 | 2.60e-30 | 110 |
Msa1192130 | AT1G36340.2 | 45.217 | 115 | 63 | 0 | 31 | 145 | 34 | 148 | 3.50e-30 | 107 |
Msa1192130 | AT1G36340.1 | 45.217 | 115 | 63 | 0 | 31 | 145 | 34 | 148 | 3.50e-30 | 107 |
Msa1192130 | AT1G16890.1 | 42.593 | 108 | 62 | 0 | 36 | 143 | 4 | 111 | 6.23e-30 | 105 |
Msa1192130 | AT1G78870.3 | 40.952 | 105 | 62 | 0 | 7 | 111 | 8 | 112 | 9.21e-30 | 105 |
Msa1192130 | AT1G78870.4 | 42.593 | 108 | 62 | 0 | 36 | 143 | 4 | 111 | 1.57e-29 | 104 |
Msa1192130 | AT1G78870.1 | 44.118 | 102 | 56 | 1 | 36 | 136 | 4 | 105 | 1.05e-27 | 100 |
Msa1192130 | AT5G50870.1 | 35.211 | 142 | 83 | 2 | 10 | 142 | 1 | 142 | 2.66e-27 | 101 |
Msa1192130 | AT2G46030.5 | 30.872 | 149 | 97 | 3 | 1 | 147 | 1 | 145 | 1.30e-26 | 99.0 |
Msa1192130 | AT2G46030.1 | 30.872 | 149 | 97 | 3 | 1 | 147 | 1 | 145 | 1.30e-26 | 99.0 |
Msa1192130 | AT3G13550.2 | 38.393 | 112 | 69 | 0 | 7 | 118 | 39 | 150 | 1.83e-26 | 98.2 |
Msa1192130 | AT3G46460.3 | 39.823 | 113 | 55 | 1 | 49 | 148 | 8 | 120 | 2.18e-26 | 96.7 |
Msa1192130 | AT3G46460.2 | 39.823 | 113 | 55 | 1 | 49 | 148 | 8 | 120 | 2.18e-26 | 96.7 |
Msa1192130 | AT3G24515.1 | 34.641 | 153 | 87 | 2 | 8 | 147 | 10 | 162 | 4.16e-26 | 102 |
Msa1192130 | AT5G50870.2 | 37.500 | 128 | 71 | 2 | 10 | 128 | 1 | 128 | 8.04e-26 | 97.4 |
Msa1192130 | AT2G46030.3 | 30.872 | 149 | 97 | 3 | 1 | 147 | 73 | 217 | 1.12e-25 | 98.6 |
Msa1192130 | AT1G63800.1 | 34.000 | 150 | 91 | 4 | 1 | 147 | 1 | 145 | 1.38e-25 | 96.7 |
Msa1192130 | AT3G55380.2 | 30.726 | 179 | 76 | 3 | 18 | 148 | 19 | 197 | 2.90e-25 | 96.3 |
Msa1192130 | AT5G41340.1 | 34.000 | 150 | 91 | 4 | 1 | 147 | 1 | 145 | 3.60e-25 | 95.5 |
Msa1192130 | AT2G46030.4 | 33.333 | 120 | 78 | 2 | 30 | 147 | 29 | 148 | 1.36e-24 | 94.0 |
Msa1192130 | AT2G46030.2 | 33.333 | 120 | 78 | 2 | 30 | 147 | 29 | 148 | 1.36e-24 | 94.0 |
Msa1192130 | AT1G63800.2 | 37.037 | 108 | 66 | 2 | 42 | 147 | 23 | 130 | 3.11e-24 | 92.4 |
Msa1192130 | AT3G24515.3 | 38.393 | 112 | 65 | 1 | 40 | 147 | 76 | 187 | 1.24e-22 | 92.8 |
Msa1192130 | AT5G41340.2 | 36.275 | 102 | 63 | 2 | 48 | 147 | 9 | 110 | 6.72e-22 | 86.3 |
Msa1192130 | AT4G36800.2 | 28.472 | 144 | 102 | 1 | 8 | 151 | 34 | 176 | 1.16e-21 | 86.3 |
Msa1192130 | AT4G36800.1 | 28.472 | 144 | 102 | 1 | 8 | 151 | 34 | 176 | 1.16e-21 | 86.3 |
Msa1192130 | AT2G18600.1 | 29.630 | 135 | 94 | 1 | 8 | 142 | 35 | 168 | 1.15e-20 | 84.0 |
Msa1192130 | AT2G18600.2 | 29.630 | 135 | 94 | 1 | 8 | 142 | 35 | 168 | 1.15e-20 | 84.0 |
Msa1192130 | AT2G32790.1 | 32.192 | 146 | 94 | 2 | 1 | 143 | 26 | 169 | 5.16e-19 | 79.3 |
Msa1192130 | AT1G45050.1 | 36.449 | 107 | 66 | 2 | 1 | 106 | 12 | 117 | 3.57e-16 | 71.6 |
Msa1192130 | AT1G75440.1 | 35.849 | 106 | 66 | 2 | 1 | 105 | 12 | 116 | 4.70e-16 | 71.2 |
Msa1192130 | AT4G36410.1 | 33.962 | 106 | 68 | 2 | 1 | 105 | 12 | 116 | 8.98e-16 | 70.5 |
Msa1192130 | AT5G50430.1 | 30.597 | 134 | 81 | 4 | 7 | 135 | 8 | 134 | 1.07e-15 | 72.0 |
Msa1192130 | AT5G50430.2 | 30.597 | 134 | 81 | 4 | 7 | 135 | 8 | 134 | 1.07e-15 | 72.0 |
Msa1192130 | AT5G42990.1 | 34.211 | 114 | 65 | 3 | 2 | 106 | 5 | 117 | 2.82e-15 | 69.3 |
Msa1192130 | AT1G17280.9 | 31.092 | 119 | 73 | 3 | 7 | 120 | 8 | 122 | 3.06e-15 | 70.5 |
Msa1192130 | AT1G17280.7 | 31.092 | 119 | 73 | 3 | 7 | 120 | 8 | 122 | 3.06e-15 | 70.5 |
Msa1192130 | AT1G17280.6 | 31.092 | 119 | 73 | 3 | 7 | 120 | 8 | 122 | 3.06e-15 | 70.5 |
Msa1192130 | AT1G17280.2 | 31.092 | 119 | 73 | 3 | 7 | 120 | 8 | 122 | 3.06e-15 | 70.5 |
Msa1192130 | AT1G17280.5 | 31.092 | 119 | 73 | 3 | 7 | 120 | 8 | 122 | 3.06e-15 | 70.5 |
Msa1192130 | AT1G17280.3 | 31.092 | 119 | 73 | 3 | 7 | 120 | 8 | 122 | 3.06e-15 | 70.5 |
Msa1192130 | AT1G17280.1 | 31.092 | 119 | 73 | 3 | 7 | 120 | 8 | 122 | 3.06e-15 | 70.5 |
Msa1192130 | AT1G17280.8 | 31.092 | 119 | 73 | 3 | 7 | 120 | 8 | 122 | 3.06e-15 | 70.5 |
Msa1192130 | AT1G17280.4 | 27.273 | 121 | 81 | 1 | 7 | 120 | 8 | 128 | 1.89e-14 | 68.6 |
Msa1192130 | AT1G53025.2 | 31.081 | 148 | 81 | 5 | 7 | 133 | 274 | 421 | 8.08e-14 | 68.2 |
Msa1192130 | AT1G53025.1 | 31.081 | 148 | 81 | 5 | 7 | 133 | 274 | 421 | 8.44e-14 | 68.2 |
Msa1192130 | AT3G17000.1 | 28.467 | 137 | 85 | 4 | 4 | 135 | 11 | 139 | 1.87e-12 | 63.5 |
Msa1192130 | AT1G45050.2 | 35.870 | 92 | 57 | 2 | 1 | 91 | 12 | 102 | 5.52e-12 | 59.3 |
Msa1192130 | AT1G53023.1 | 27.703 | 148 | 86 | 4 | 7 | 133 | 60 | 207 | 1.34e-11 | 61.2 |
Msa1192130 | AT2G16920.1 | 30.894 | 123 | 73 | 4 | 7 | 118 | 853 | 974 | 1.50e-11 | 61.6 |
Msa1192130 | AT2G16920.2 | 30.894 | 123 | 73 | 4 | 7 | 118 | 853 | 974 | 1.50e-11 | 61.6 |
Msa1192130 | AT3G15355.1 | 30.075 | 133 | 81 | 4 | 7 | 127 | 335 | 467 | 8.49e-11 | 59.3 |
Find 64 sgRNAs with CRISPR-Local
Find 387 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTTGGAATGCTGTGATATT+TGG | 0.146008 | 8_1:-37445286 | Msa1192130:CDS |
CATAGTTTAATTGACAATTT+TGG | 0.213259 | 8_1:-37439892 | Msa1192130:three_prime_UTR |
ATTGCAGCTACATCATAAAT+TGG | 0.216194 | 8_1:+37441241 | None:intergenic |
CTACTGTGCGCTTTGTTTCT+CGG | 0.256326 | 8_1:-37443854 | Msa1192130:CDS |
TCAGAGTTTGCTGGTGAGTT+TGG | 0.262363 | 8_1:+37440225 | None:intergenic |
CTCATCAGTCTCTTCCTTGC+AGG | 0.282617 | 8_1:+37445379 | None:intergenic |
CGCACAGTAGGTGGTTTATT+AGG | 0.286690 | 8_1:+37443867 | None:intergenic |
CAGAGTTTGCTGGTGAGTTT+GGG | 0.293059 | 8_1:+37440226 | None:intergenic |
AGTCAATGCCATATATATTA+TGG | 0.306640 | 8_1:+37440117 | None:intergenic |
CTGATTAACCATAATATATA+TGG | 0.331305 | 8_1:-37440125 | Msa1192130:exon |
CCATCCCAAGGGGTGTCATC+TGG | 0.350013 | 8_1:+37444917 | None:intergenic |
TCTATGGTTGGCCAATTCTA+TGG | 0.354420 | 8_1:-37439860 | Msa1192130:three_prime_UTR |
AAGCATGATATTGTTGTCTT+GGG | 0.373603 | 8_1:+37445306 | None:intergenic |
GGAGCCCCACTGATGCCAGC+AGG | 0.380768 | 8_1:+37445328 | None:intergenic |
TTTGGAATGCTGTGATATTT+GGG | 0.385954 | 8_1:-37445285 | Msa1192130:intron |
AAAGCATGATATTGTTGTCT+TGG | 0.388504 | 8_1:+37445305 | None:intergenic |
TTTGCTGGTGAGTTTGGGTT+TGG | 0.408010 | 8_1:+37440231 | None:intergenic |
GGCACCTTGCACCATAGAAT+TGG | 0.409586 | 8_1:+37439849 | None:intergenic |
CGAGCAGCTTCAGAGTTTGC+TGG | 0.433504 | 8_1:+37440216 | None:intergenic |
AAGACAACAATATCATGCTT+TGG | 0.448170 | 8_1:-37445303 | Msa1192130:CDS |
TTCTGACTTGCGAGTGGAGA+AGG | 0.451763 | 8_1:+37446150 | None:intergenic |
CCAGGCCAGATGACACCCCT+TGG | 0.470737 | 8_1:-37444922 | Msa1192130:intron |
GAGCCCCACTGATGCCAGCA+GGG | 0.484979 | 8_1:+37445329 | None:intergenic |
TTGCAGCTACATCATAAATT+GGG | 0.485683 | 8_1:+37441242 | None:intergenic |
GCAATTTCAGTTTATGCAGA+TGG | 0.488118 | 8_1:-37441301 | Msa1192130:intron |
TGCAGATGGAAGTATATGCT+TGG | 0.489154 | 8_1:-37441287 | Msa1192130:CDS |
CAGGCCAGATGACACCCCTT+GGG | 0.497653 | 8_1:-37444921 | Msa1192130:CDS |
TGCAATACTTACCTCAATCC+AGG | 0.507869 | 8_1:-37441224 | Msa1192130:intron |
AGCCCCACTGATGCCAGCAG+GGG | 0.528638 | 8_1:+37445330 | None:intergenic |
TCTATGGTGCAAGGTGCCAT+AGG | 0.533183 | 8_1:-37439844 | Msa1192130:three_prime_UTR |
AAGCAGAAATGTGCACAACA+TGG | 0.540036 | 8_1:+37439964 | None:intergenic |
ATGAATGAAACAAACAATGA+AGG | 0.540307 | 8_1:+37439932 | None:intergenic |
TCAGAGAAATGCTTCTTCCA+TGG | 0.552635 | 8_1:+37446301 | None:intergenic |
AGCAGAAATGTGCACAACAT+GGG | 0.554064 | 8_1:+37439965 | None:intergenic |
CAGCAAACTCTGAAGCTGCT+CGG | 0.561247 | 8_1:-37440215 | Msa1192130:CDS |
AATCACAATTACCTGGATTG+AGG | 0.567420 | 8_1:+37441213 | None:intergenic |
CCAGATGACACCCCTTGGGA+TGG | 0.568099 | 8_1:-37444917 | Msa1192130:CDS |
TGGTTGACCAAGTCTATGGT+TGG | 0.568459 | 8_1:-37439872 | Msa1192130:three_prime_UTR |
CGAGTGGAGAAGGGTGAGAG+AGG | 0.572062 | 8_1:+37446160 | None:intergenic |
CTGCAAGGAAGAGACTGATG+AGG | 0.573399 | 8_1:-37445378 | Msa1192130:CDS |
GCAGAAATGTGCACAACATG+GGG | 0.576113 | 8_1:+37439966 | None:intergenic |
CGAGAAACAAAGCGCACAGT+AGG | 0.579371 | 8_1:+37443855 | None:intergenic |
AGTTGTTTATAAAAGTCTGA+TGG | 0.582068 | 8_1:+37440056 | None:intergenic |
GTGAGATTGTTGAGCAGAGT+TGG | 0.584586 | 8_1:-37440152 | Msa1192130:CDS |
TCTGACTTGCGAGTGGAGAA+GGG | 0.587041 | 8_1:+37446151 | None:intergenic |
GCCCCACTGATGCCAGCAGG+GGG | 0.587217 | 8_1:+37445331 | None:intergenic |
ATGATTGTACCTCCATCCCA+AGG | 0.588580 | 8_1:+37444905 | None:intergenic |
CTTTCATTAGCCTATCGCCA+TGG | 0.590207 | 8_1:-37446318 | Msa1192130:five_prime_UTR |
GATGACACCCCTTGGGATGG+AGG | 0.591472 | 8_1:-37444914 | Msa1192130:intron |
GAAACAAAGCGCACAGTAGG+TGG | 0.601646 | 8_1:+37443858 | None:intergenic |
TGCAAGGAAGAGACTGATGA+GGG | 0.609529 | 8_1:-37445377 | Msa1192130:CDS |
AATGCTTCTTCCATGGCGAT+AGG | 0.610659 | 8_1:+37446308 | None:intergenic |
AGCAAACACACAGTCAAGCA+AGG | 0.611633 | 8_1:+37440015 | None:intergenic |
AGCATGATATTGTTGTCTTG+GGG | 0.612000 | 8_1:+37445307 | None:intergenic |
GAGAGGTTCTGACTTGCGAG+TGG | 0.617015 | 8_1:+37446144 | None:intergenic |
GAATTGGCCAACCATAGACT+TGG | 0.623183 | 8_1:+37439865 | None:intergenic |
TGATTGTACCTCCATCCCAA+GGG | 0.632728 | 8_1:+37444906 | None:intergenic |
TGAGGATGTCGACTCCTGCA+AGG | 0.645722 | 8_1:-37445393 | Msa1192130:exon |
TTGGCCAATTCTATGGTGCA+AGG | 0.683830 | 8_1:-37439853 | Msa1192130:three_prime_UTR |
ATATGGCATTGACTTGACAA+TGG | 0.699940 | 8_1:-37440108 | Msa1192130:three_prime_UTR |
AAGTGATTAATGTGAAAACG+CGG | 0.713370 | 8_1:+37446255 | None:intergenic |
GATTGTACCTCCATCCCAAG+GGG | 0.713520 | 8_1:+37444907 | None:intergenic |
CAGAAATGTGCACAACATGG+GGG | 0.735128 | 8_1:+37439967 | None:intergenic |
GTTGACGCTTCAGTTCACAG+AGG | 0.785071 | 8_1:-37443895 | Msa1192130:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AGTTTTTCTATTATAAAAAT+AGG | + | chr8_1:37443022-37443041 | None:intergenic | 10.0% |
!!! | TATTTTTATAATAGAAAAAC+TGG | - | chr8_1:37443021-37443040 | Msa1192130:intron | 10.0% |
!! | ATTGAAAAATTTACATATTA+TGG | + | chr8_1:37443064-37443083 | None:intergenic | 10.0% |
!!! | TATTATATCTAAAATTGAAT+TGG | - | chr8_1:37444821-37444840 | Msa1192130:intron | 10.0% |
!! | CTAAATAATTTATGAAATTT+AGG | + | chr8_1:37445617-37445636 | None:intergenic | 10.0% |
!! | CTAAATTTCATAAATTATTT+AGG | - | chr8_1:37445615-37445634 | Msa1192130:intron | 10.0% |
!! | AATACCAACAAAAAAATAAT+AGG | + | chr8_1:37440243-37440262 | None:intergenic | 15.0% |
!!! | TATTTATTTATTTTGGTGTT+TGG | - | chr8_1:37440418-37440437 | Msa1192130:intron | 15.0% |
!!! | GGAAAATAAAATTTGTTATA+TGG | - | chr8_1:37440660-37440679 | Msa1192130:intron | 15.0% |
!! | AAAAAAAAGTTGAAAATCAA+TGG | + | chr8_1:37444187-37444206 | None:intergenic | 15.0% |
!! | TGTATTTAGAGATTATTAAA+CGG | - | chr8_1:37444542-37444561 | Msa1192130:intron | 15.0% |
!! | AAAAAAAAAAAAACTTGATG+TGG | - | chr8_1:37444629-37444648 | Msa1192130:intron | 15.0% |
!! | GTTTAGAAAAAGAATAATTG+TGG | + | chr8_1:37440028-37440047 | None:intergenic | 20.0% |
!!! | TAAGCCTATTATTTTTTTGT+TGG | - | chr8_1:37440236-37440255 | Msa1192130:CDS | 20.0% |
!! | AAAGCATGAAAATATGAAAT+AGG | - | chr8_1:37440441-37440460 | Msa1192130:intron | 20.0% |
!! | TGATAATAATTGTTAAGCTT+TGG | - | chr8_1:37440638-37440657 | Msa1192130:intron | 20.0% |
!! | GATAATAATTGTTAAGCTTT+GGG | - | chr8_1:37440639-37440658 | Msa1192130:intron | 20.0% |
!!! | TGCTATGTTTTTAAATTTTG+TGG | - | chr8_1:37440760-37440779 | Msa1192130:intron | 20.0% |
!! | AATCAAAAACGAATAGTAAT+CGG | + | chr8_1:37440807-37440826 | None:intergenic | 20.0% |
!! | GCTAAAACCATAAAATAAAT+GGG | + | chr8_1:37441238-37441257 | None:intergenic | 20.0% |
!! | AGCTAAAACCATAAAATAAA+TGG | + | chr8_1:37441239-37441258 | None:intergenic | 20.0% |
!!! | ATTCTAGTATTTTGTTAACT+TGG | - | chr8_1:37441639-37441658 | Msa1192130:intron | 20.0% |
!! | CAAAAAATAATTGATTACGA+TGG | - | chr8_1:37441829-37441848 | Msa1192130:intron | 20.0% |
!!! | TTGTTGATTGTAAAAAATAG+CGG | - | chr8_1:37441885-37441904 | Msa1192130:intron | 20.0% |
!! | TTAGATGAAAATCCAAAATT+TGG | + | chr8_1:37442288-37442307 | None:intergenic | 20.0% |
!!! | AAATTTTGGATTTTCATCTA+AGG | - | chr8_1:37442287-37442306 | Msa1192130:intron | 20.0% |
!! | CTAACAAGTTTAAACAAAAA+CGG | - | chr8_1:37442517-37442536 | Msa1192130:intron | 20.0% |
!!! | ACTTTTTTTTTGTCTTATGT+TGG | - | chr8_1:37444197-37444216 | Msa1192130:intron | 20.0% |
!! | TTTGCTTTATAAAGAGTAAA+TGG | - | chr8_1:37444761-37444780 | Msa1192130:intron | 20.0% |
!! | ATGAAACTATACATATTGAT+GGG | + | chr8_1:37445109-37445128 | None:intergenic | 20.0% |
!! | AATGAAACTATACATATTGA+TGG | + | chr8_1:37445110-37445129 | None:intergenic | 20.0% |
!!! | TTTATACAACCTGATTTTAA+CGG | - | chr8_1:37445359-37445378 | Msa1192130:CDS | 20.0% |
!!! | GGTTGATATAAATTATTTCA+AGG | + | chr8_1:37445860-37445879 | None:intergenic | 20.0% |
!!! | GATATATTCTTGTTTTTCAA+TGG | - | chr8_1:37445933-37445952 | Msa1192130:intron | 20.0% |
!! | CTGATTAACCATAATATATA+TGG | - | chr8_1:37446109-37446128 | Msa1192130:intron | 20.0% |
!!! | CATAGTTTAATTGACAATTT+TGG | - | chr8_1:37446342-37446361 | Msa1192130:five_prime_UTR | 20.0% |
!!! | CATATCCATGTTGATTTTAT+TGG | - | chr8_1:37440201-37440220 | Msa1192130:CDS | 25.0% |
! | AAACACCAATAAAATCAACA+TGG | + | chr8_1:37440209-37440228 | None:intergenic | 25.0% |
!!! | ATTTTGTTATGTTTGTGTTG+TGG | - | chr8_1:37440282-37440301 | Msa1192130:intron | 25.0% |
!!! | TTTTCTAAAATTTGAGCTTG+TGG | - | chr8_1:37440333-37440352 | Msa1192130:intron | 25.0% |
! | TTTGGATATGGAAAAATTTG+TGG | - | chr8_1:37440589-37440608 | Msa1192130:intron | 25.0% |
!!! | GTTTGCTATTGAATTATTGA+TGG | - | chr8_1:37440613-37440632 | Msa1192130:intron | 25.0% |
!!! | TCGTTTTTGATTTTGATTGT+AGG | - | chr8_1:37440815-37440834 | Msa1192130:intron | 25.0% |
!!! | TTTTTGATTTTGATTGTAGG+TGG | - | chr8_1:37440818-37440837 | Msa1192130:intron | 25.0% |
!!! | GTGTTTTCCCATTTATTTTA+TGG | - | chr8_1:37441228-37441247 | Msa1192130:CDS | 25.0% |
! | TCTTCCTTTATAAACTGAAA+GGG | - | chr8_1:37441356-37441375 | Msa1192130:intron | 25.0% |
! | AAAACCCTTTCAGTTTATAA+AGG | + | chr8_1:37441363-37441382 | None:intergenic | 25.0% |
!! | ATTTATAACTTTCTAGTGTG+CGG | - | chr8_1:37441410-37441429 | Msa1192130:intron | 25.0% |
! | TTAACTGATAAGTATCTAAG+CGG | + | chr8_1:37441530-37441549 | None:intergenic | 25.0% |
! | ATACTTATCAGTTAACTACT+TGG | - | chr8_1:37441535-37441554 | Msa1192130:intron | 25.0% |
! | TACAAAATGTTGTCAACTAA+CGG | + | chr8_1:37441956-37441975 | None:intergenic | 25.0% |
!! | ATTTTGTACTAAATAGCGTA+AGG | - | chr8_1:37441968-37441987 | Msa1192130:intron | 25.0% |
! | TTGTTAAATAGCAGTTATAG+TGG | + | chr8_1:37442036-37442055 | None:intergenic | 25.0% |
!! | TAACTGCTATTTAACAATAC+TGG | - | chr8_1:37442039-37442058 | Msa1192130:intron | 25.0% |
!!! | TATTTTAGTTGTTCAGTTTG+TGG | - | chr8_1:37442172-37442191 | Msa1192130:intron | 25.0% |
!! | GTAATTTTGTACTTACTGTT+TGG | + | chr8_1:37442415-37442434 | None:intergenic | 25.0% |
! | TTCTTGACGTATAGTTTATA+TGG | - | chr8_1:37442679-37442698 | Msa1192130:intron | 25.0% |
! | AAAACAATTGTTCTTAAGTC+AGG | - | chr8_1:37442707-37442726 | Msa1192130:intron | 25.0% |
! | AAAACAATTGTTCTTAAGTC+AGG | - | chr8_1:37442707-37442726 | Msa1192130:intron | 25.0% |
! | TCCAAAATACTAACTATAAG+GGG | + | chr8_1:37443293-37443312 | None:intergenic | 25.0% |
! | GTCCAAAATACTAACTATAA+GGG | + | chr8_1:37443294-37443313 | None:intergenic | 25.0% |
! | TGTCCAAAATACTAACTATA+AGG | + | chr8_1:37443295-37443314 | None:intergenic | 25.0% |
!!! | TATAGTTAGTATTTTGGACA+CGG | - | chr8_1:37443295-37443314 | Msa1192130:intron | 25.0% |
! | TACAAAATACTAACTGTAAG+GGG | + | chr8_1:37443347-37443366 | None:intergenic | 25.0% |
! | GTACAAAATACTAACTGTAA+GGG | + | chr8_1:37443348-37443367 | None:intergenic | 25.0% |
! | TGTACAAAATACTAACTGTA+AGG | + | chr8_1:37443349-37443368 | None:intergenic | 25.0% |
!! | TACAGTTAGTATTTTGTACA+CGG | - | chr8_1:37443349-37443368 | Msa1192130:intron | 25.0% |
!! | TGTTAACCTATTTTGCATAT+AGG | + | chr8_1:37443604-37443623 | None:intergenic | 25.0% |
! | AAACACTACTAATGAATAGT+GGG | + | chr8_1:37443812-37443831 | None:intergenic | 25.0% |
! | TAAACACTACTAATGAATAG+TGG | + | chr8_1:37443813-37443832 | None:intergenic | 25.0% |
! | TAGGCTACATTACAAAAAAA+AGG | + | chr8_1:37443897-37443916 | None:intergenic | 25.0% |
!!! | TTTTTTGTAATGTAGCCTAT+TGG | - | chr8_1:37443898-37443917 | Msa1192130:CDS | 25.0% |
! | AATTAGCAACAATTGAAAGA+TGG | + | chr8_1:37444139-37444158 | None:intergenic | 25.0% |
!! | CTTTCAATTGTTGCTAATTT+TGG | - | chr8_1:37444140-37444159 | Msa1192130:intron | 25.0% |
! | GTTCAAAATCAATCAACAAT+CGG | + | chr8_1:37444245-37444264 | None:intergenic | 25.0% |
! | AAGACAAAAACAAATAACAC+AGG | + | chr8_1:37444267-37444286 | None:intergenic | 25.0% |
! | AATCTTCAAAGTAGAAAACT+TGG | - | chr8_1:37444503-37444522 | Msa1192130:intron | 25.0% |
!! | ACAAACATCAAGTTGTTAAA+TGG | + | chr8_1:37444608-37444627 | None:intergenic | 25.0% |
! | TTTAACTATGTTTGATTCAG+CGG | + | chr8_1:37444678-37444697 | None:intergenic | 25.0% |
! | GTTAAATCTTACCAAATTTG+TGG | - | chr8_1:37444692-37444711 | Msa1192130:intron | 25.0% |
! | TTAATCAAATTCTTGGAATC+TGG | + | chr8_1:37444725-37444744 | None:intergenic | 25.0% |
! | ATTCCAAGAATTTGATTAAG+TGG | - | chr8_1:37444726-37444745 | Msa1192130:intron | 25.0% |
! | TTAAAGCAAATTACAGAAAC+AGG | + | chr8_1:37444796-37444815 | None:intergenic | 25.0% |
!! | TATCTAAAATTGAATTGGAG+TGG | - | chr8_1:37444826-37444845 | Msa1192130:intron | 25.0% |
!! | TGGATATTTTACAAAATCAG+TGG | - | chr8_1:37444967-37444986 | Msa1192130:intron | 25.0% |
!! | TAAAAGTATATTGGTCTGTT+TGG | - | chr8_1:37445283-37445302 | Msa1192130:intron | 25.0% |
!!! | TCTTGTTTGGTTCATTATTT+TGG | + | chr8_1:37445549-37445568 | None:intergenic | 25.0% |
!!! | TACTTTAAAGCTTTCTTGTT+TGG | + | chr8_1:37445562-37445581 | None:intergenic | 25.0% |
! | TCTAATGAAGAAAAATGAGT+TGG | + | chr8_1:37445774-37445793 | None:intergenic | 25.0% |
!!! | CTTTGTTACTCTGTTTTTTA+AGG | + | chr8_1:37445881-37445900 | None:intergenic | 25.0% |
!!! | ATGTGATGTTTTAGTAACTA+TGG | - | chr8_1:37445911-37445930 | Msa1192130:intron | 25.0% |
! | AGTCAATGCCATATATATTA+TGG | + | chr8_1:37446120-37446139 | None:intergenic | 25.0% |
! | AGTTGTTTATAAAAGTCTGA+TGG | + | chr8_1:37446181-37446200 | None:intergenic | 25.0% |
! | ATGAATGAAACAAACAATGA+AGG | + | chr8_1:37446305-37446324 | None:intergenic | 25.0% |
AAGTGATTAATGTGAAAACG+CGG | + | chr8_1:37439982-37440001 | None:intergenic | 30.0% | |
GATTAGGCTTAATTGATCTT+TGG | - | chr8_1:37440363-37440382 | Msa1192130:intron | 30.0% | |
ACAACTCTATGAATTGTGTT+TGG | - | chr8_1:37440571-37440590 | Msa1192130:intron | 30.0% | |
CTATGAATTGTGTTTGGATA+TGG | - | chr8_1:37440577-37440596 | Msa1192130:intron | 30.0% | |
AAGCATGATATTGTTGTCTT+GGG | + | chr8_1:37440931-37440950 | None:intergenic | 30.0% | |
AAAGCATGATATTGTTGTCT+TGG | + | chr8_1:37440932-37440951 | None:intergenic | 30.0% | |
AAGACAACAATATCATGCTT+TGG | - | chr8_1:37440931-37440950 | Msa1192130:intron | 30.0% | |
! | TTTGGAATGCTGTGATATTT+GGG | - | chr8_1:37440949-37440968 | Msa1192130:intron | 30.0% |
ACATAAAAATTGTTGTGACG+TGG | - | chr8_1:37441071-37441090 | Msa1192130:intron | 30.0% | |
! | TTTTTATGTTGCCTCAATCT+AGG | + | chr8_1:37441097-37441116 | None:intergenic | 30.0% |
ACATAAAAATTGTTGTCACG+TGG | - | chr8_1:37441108-37441127 | Msa1192130:intron | 30.0% | |
AGATAAAAATTGTTGTGACG+TGG | - | chr8_1:37441157-37441176 | Msa1192130:intron | 30.0% | |
CTTTCAGTTTATAAAGGAAG+AGG | + | chr8_1:37441357-37441376 | None:intergenic | 30.0% | |
CTCTTCCTTTATAAACTGAA+AGG | - | chr8_1:37441355-37441374 | Msa1192130:intron | 30.0% | |
GAACAAACTTTGATTCATAG+TGG | - | chr8_1:37441586-37441605 | Msa1192130:intron | 30.0% | |
!! | TATCATTTATCGATTTGCTG+TGG | - | chr8_1:37441667-37441686 | Msa1192130:intron | 30.0% |
TCTAGTATGTGTTAACTACT+TGG | - | chr8_1:37441738-37441757 | Msa1192130:intron | 30.0% | |
GTCATGAATTAACAGATTCT+TGG | - | chr8_1:37441806-37441825 | Msa1192130:intron | 30.0% | |
GGCATTTATTTGTATGTTGT+TGG | - | chr8_1:37441850-37441869 | Msa1192130:intron | 30.0% | |
TATCGGGACATGATTTAATT+TGG | - | chr8_1:37442069-37442088 | Msa1192130:intron | 30.0% | |
TCTCAACTTATAGACAGAAA+AGG | - | chr8_1:37442201-37442220 | Msa1192130:intron | 30.0% | |
CTCAACTTATAGACAGAAAA+GGG | - | chr8_1:37442202-37442221 | Msa1192130:intron | 30.0% | |
! | ATTACCTTGCAATTCTTTTC+AGG | - | chr8_1:37442430-37442449 | Msa1192130:intron | 30.0% |
CTAACAAGTTCAAACCAAAA+CGG | - | chr8_1:37442557-37442576 | Msa1192130:intron | 30.0% | |
TAACAAGTTCAAACCAAAAC+GGG | - | chr8_1:37442558-37442577 | Msa1192130:intron | 30.0% | |
!! | CAGCTTTTGAAGAACTTTTT+TGG | - | chr8_1:37442634-37442653 | Msa1192130:intron | 30.0% |
AATTGTTCTTAAGTCAGGTA+TGG | - | chr8_1:37442712-37442731 | Msa1192130:intron | 30.0% | |
AATTGTTCTTAAGTCAGGTT+TGG | - | chr8_1:37442745-37442764 | Msa1192130:intron | 30.0% | |
CTATCTTAGTTTCCCTATTA+GGG | - | chr8_1:37442876-37442895 | Msa1192130:intron | 30.0% | |
GCTATTAGAAACTGGAATAT+CGG | + | chr8_1:37442911-37442930 | None:intergenic | 30.0% | |
ATATTCCAGTTTCTAATAGC+TGG | - | chr8_1:37442911-37442930 | Msa1192130:intron | 30.0% | |
TTAAACCAGCTATTAGAAAC+TGG | + | chr8_1:37442919-37442938 | None:intergenic | 30.0% | |
! | GTTTCTAATAGCTGGTTTAA+CGG | - | chr8_1:37442919-37442938 | Msa1192130:intron | 30.0% |
! | CGCAAAACAAAGAGAATTTT+AGG | - | chr8_1:37442948-37442967 | Msa1192130:intron | 30.0% |
CATACACATACAAAAGGAAA+TGG | + | chr8_1:37443113-37443132 | None:intergenic | 30.0% | |
AACAATAACAGATAGTGTTG+CGG | + | chr8_1:37443207-37443226 | None:intergenic | 30.0% | |
ATCTGTTATTGTTTACATCG+CGG | - | chr8_1:37443214-37443233 | Msa1192130:intron | 30.0% | |
GGGAAAATAAGTGTTATCAA+TGG | + | chr8_1:37443273-37443292 | None:intergenic | 30.0% | |
! | TCCCCTTATAGTTAGTATTT+TGG | - | chr8_1:37443289-37443308 | Msa1192130:intron | 30.0% |
ATAAATTTGAACGACATTCC+AGG | + | chr8_1:37443378-37443397 | None:intergenic | 30.0% | |
AAGTTTGCAATGAATCCAAT+AGG | - | chr8_1:37443706-37443725 | Msa1192130:intron | 30.0% | |
GAGCATAAGTTCAAAATTGA+CGG | + | chr8_1:37443853-37443872 | None:intergenic | 30.0% | |
!!! | TTATGCTCTTTTTTGCGTTA+TGG | - | chr8_1:37443865-37443884 | Msa1192130:CDS | 30.0% |
! | TTAGTGACTTTGTTTATGCT+GGG | + | chr8_1:37444013-37444032 | None:intergenic | 30.0% |
CATAAACAAAGTCACTAACT+AGG | - | chr8_1:37444015-37444034 | Msa1192130:intron | 30.0% | |
AAGATACTATCTGTGTATTC+TGG | - | chr8_1:37444302-37444321 | Msa1192130:intron | 30.0% | |
! | TATCTAACCCTTCTCTTTTT+GGG | - | chr8_1:37444474-37444493 | Msa1192130:intron | 30.0% |
TCACCACTTAATCAAATTCT+TGG | + | chr8_1:37444732-37444751 | None:intergenic | 30.0% | |
TTGCAGCTACATCATAAATT+GGG | + | chr8_1:37444995-37445014 | None:intergenic | 30.0% | |
ATTGCAGCTACATCATAAAT+TGG | + | chr8_1:37444996-37445015 | None:intergenic | 30.0% | |
! | TTTTCAGAGTAAAGCAATGA+TGG | + | chr8_1:37445137-37445156 | None:intergenic | 30.0% |
GAATCTAATTATACCACCTA+GGG | + | chr8_1:37445188-37445207 | None:intergenic | 30.0% | |
TGAATCTAATTATACCACCT+AGG | + | chr8_1:37445189-37445208 | None:intergenic | 30.0% | |
AAGAAGAAAGTGAACTGAAA+TGG | + | chr8_1:37445249-37445268 | None:intergenic | 30.0% | |
! | CAGGTCAACTAAAAGTATAT+TGG | - | chr8_1:37445274-37445293 | Msa1192130:intron | 30.0% |
!! | ACTATAAGGAAGGTTTTGAT+CGG | + | chr8_1:37445479-37445498 | None:intergenic | 30.0% |
!!! | TTTGGTTCATTATTTTGGAG+GGG | + | chr8_1:37445544-37445563 | None:intergenic | 30.0% |
!!! | GTTTGGTTCATTATTTTGGA+GGG | + | chr8_1:37445545-37445564 | None:intergenic | 30.0% |
!!! | TGTTTGGTTCATTATTTTGG+AGG | + | chr8_1:37445546-37445565 | None:intergenic | 30.0% |
TAGGTATATAGTGTTCGATT+GGG | + | chr8_1:37445598-37445617 | None:intergenic | 30.0% | |
TTAGGTATATAGTGTTCGAT+TGG | + | chr8_1:37445599-37445618 | None:intergenic | 30.0% | |
GTAATGCTTTATGTTCCATT+AGG | - | chr8_1:37445684-37445703 | Msa1192130:intron | 30.0% | |
AGCATGAACTAATGAAACAA+CGG | + | chr8_1:37445750-37445769 | None:intergenic | 30.0% | |
TGAACAAACATATCACAAGT+TGG | + | chr8_1:37445824-37445843 | None:intergenic | 30.0% | |
TGTGTTGTGGTTAGAAATGA+AGG | - | chr8_1:37440295-37440314 | Msa1192130:intron | 35.0% | |
GTGTTGTGGTTAGAAATGAA+GGG | - | chr8_1:37440296-37440315 | Msa1192130:intron | 35.0% | |
AGCATGATATTGTTGTCTTG+GGG | + | chr8_1:37440930-37440949 | None:intergenic | 35.0% | |
!! | CTTTGGAATGCTGTGATATT+TGG | - | chr8_1:37440948-37440967 | Msa1192130:intron | 35.0% |
AATCACAGTTAAAGCGGAAT+CGG | + | chr8_1:37441034-37441053 | None:intergenic | 35.0% | |
CAACACAATCACAGTTAAAG+CGG | + | chr8_1:37441040-37441059 | None:intergenic | 35.0% | |
CTTTAACTGTGATTGTGTTG+CGG | - | chr8_1:37441040-37441059 | Msa1192130:intron | 35.0% | |
!! | ATTTGTATGTTGTTGGTAGC+AGG | - | chr8_1:37441857-37441876 | Msa1192130:intron | 35.0% |
!! | TTTGTATGTTGTTGGTAGCA+GGG | - | chr8_1:37441858-37441877 | Msa1192130:intron | 35.0% |
TTGTACTAAATAGCGTAAGG+CGG | - | chr8_1:37441971-37441990 | Msa1192130:intron | 35.0% | |
!! | ATAGTGGTGCTATAACATAG+CGG | + | chr8_1:37442020-37442039 | None:intergenic | 35.0% |
!! | ACAATACTGGAAGTGTCTAT+CGG | - | chr8_1:37442052-37442071 | Msa1192130:intron | 35.0% |
TACATAAAACACCATGACAC+GGG | + | chr8_1:37442253-37442272 | None:intergenic | 35.0% | |
CTACATAAAACACCATGACA+CGG | + | chr8_1:37442254-37442273 | None:intergenic | 35.0% | |
! | GTACACAGTCTTCCAAATTT+TGG | - | chr8_1:37442273-37442292 | Msa1192130:intron | 35.0% |
!!! | AGGAATGTCTTGCTTTTTTC+AGG | - | chr8_1:37442307-37442326 | Msa1192130:intron | 35.0% |
AACTCCTGAAAAGAATTGCA+AGG | + | chr8_1:37442437-37442456 | None:intergenic | 35.0% | |
! | TTAAGTCAGGTTTGGAACTT+TGG | - | chr8_1:37442753-37442772 | Msa1192130:intron | 35.0% |
GCTATCTTAGTTTCCCTATT+AGG | - | chr8_1:37442875-37442894 | Msa1192130:intron | 35.0% | |
ACACATACAAAAGGAAATGG+TGG | + | chr8_1:37443110-37443129 | None:intergenic | 35.0% | |
ACGTCACATACACATACAAA+AGG | + | chr8_1:37443119-37443138 | None:intergenic | 35.0% | |
ACAATAACAGATAGTGTTGC+GGG | + | chr8_1:37443206-37443225 | None:intergenic | 35.0% | |
! | TTGTTTACATCGCGGATTTT+TGG | - | chr8_1:37443222-37443241 | Msa1192130:intron | 35.0% |
!! | AAAAGAAGTGTCAACATTCC+AGG | + | chr8_1:37443324-37443343 | None:intergenic | 35.0% |
! | ATGCTGAACTTTTGTTAGTG+TGG | - | chr8_1:37443445-37443464 | Msa1192130:intron | 35.0% |
TAGTGTGGTTGTCAAAAACT+TGG | - | chr8_1:37443460-37443479 | Msa1192130:intron | 35.0% | |
AGTGTGGTTGTCAAAAACTT+GGG | - | chr8_1:37443461-37443480 | Msa1192130:intron | 35.0% | |
CGACTCTAGGTATCAAAATT+AGG | - | chr8_1:37443510-37443529 | Msa1192130:intron | 35.0% | |
TAGACGTTTCTGTGTAAACT+CGG | - | chr8_1:37443547-37443566 | Msa1192130:intron | 35.0% | |
CGTCAACCTATATGCAAAAT+AGG | - | chr8_1:37443595-37443614 | Msa1192130:intron | 35.0% | |
TTGTTTATCCTCTGAGCTAT+GGG | + | chr8_1:37443648-37443667 | None:intergenic | 35.0% | |
TTTGTTTATCCTCTGAGCTA+TGG | + | chr8_1:37443649-37443668 | None:intergenic | 35.0% | |
AGTTTCGGTTCATCATAGTT+GGG | + | chr8_1:37443749-37443768 | None:intergenic | 35.0% | |
ATCACAATAGAGCTGAGTTT+CGG | + | chr8_1:37443764-37443783 | None:intergenic | 35.0% | |
! | GTTAGTGACTTTGTTTATGC+TGG | + | chr8_1:37444014-37444033 | None:intergenic | 35.0% |
GTTCATTGCAATCTTGTGAT+GGG | + | chr8_1:37444051-37444070 | None:intergenic | 35.0% | |
ATCTAGGTTTCATCAGAGTT+GGG | + | chr8_1:37444073-37444092 | None:intergenic | 35.0% | |
AGCAACAATTGAAAGATGGT+AGG | + | chr8_1:37444135-37444154 | None:intergenic | 35.0% | |
!!! | TGTTGCTAATTTTGGTCTTG+CGG | - | chr8_1:37444148-37444167 | Msa1192130:intron | 35.0% |
CACAGATAGTATCTTGAGAT+AGG | + | chr8_1:37444297-37444316 | None:intergenic | 35.0% | |
!! | TCTGTGTATTCTGGTTTAGT+CGG | - | chr8_1:37444311-37444330 | Msa1192130:intron | 35.0% |
! | GTATCTAACCCTTCTCTTTT+TGG | - | chr8_1:37444473-37444492 | Msa1192130:intron | 35.0% |
! | ATCTAACCCTTCTCTTTTTG+GGG | - | chr8_1:37444475-37444494 | Msa1192130:intron | 35.0% |
TTCAATCCCCAAAAAGAGAA+GGG | + | chr8_1:37444484-37444503 | None:intergenic | 35.0% | |
TTTCAATCCCCAAAAAGAGA+AGG | + | chr8_1:37444485-37444504 | None:intergenic | 35.0% | |
CTGGCAAATATCCACAAATT+TGG | + | chr8_1:37444706-37444725 | None:intergenic | 35.0% | |
GCAATTTCAGTTTATGCAGA+TGG | - | chr8_1:37444933-37444952 | Msa1192130:intron | 35.0% | |
AATCACAATTACCTGGATTG+AGG | + | chr8_1:37445024-37445043 | None:intergenic | 35.0% | |
TCAAGTGAATCACAATTACC+TGG | + | chr8_1:37445031-37445050 | None:intergenic | 35.0% | |
TTCACTTTCTTCTTTGAGTC+AGG | - | chr8_1:37445255-37445274 | Msa1192130:intron | 35.0% | |
! | TTGGTCTGTTTGGTTCAAAT+AGG | - | chr8_1:37445293-37445312 | Msa1192130:CDS | 35.0% |
! | TGGTCTGTTTGGTTCAAATA+GGG | - | chr8_1:37445294-37445313 | Msa1192130:CDS | 35.0% |
!! | ACAACCTGATTTTAACGGAA+AGG | - | chr8_1:37445364-37445383 | Msa1192130:CDS | 35.0% |
!! | GTTTTGATCGGACAAAAGAA+GGG | + | chr8_1:37445467-37445486 | None:intergenic | 35.0% |
GATCAAAACCTTCCTTATAG+TGG | - | chr8_1:37445478-37445497 | Msa1192130:intron | 35.0% | |
! | AAAACCTTCCTTATAGTGGA+GGG | - | chr8_1:37445482-37445501 | Msa1192130:intron | 35.0% |
AGGTATATAGTGTTCGATTG+GGG | + | chr8_1:37445597-37445616 | None:intergenic | 35.0% | |
! | ATAAAGCATTACTTCCACTG+TGG | + | chr8_1:37445676-37445695 | None:intergenic | 35.0% |
!! | ATATGGCATTGACTTGACAA+TGG | - | chr8_1:37446126-37446145 | Msa1192130:intron | 35.0% |
!!! | ATTTTGGTTGACCAAGTCTA+TGG | - | chr8_1:37446358-37446377 | Msa1192130:five_prime_UTR | 35.0% |
TCAGAGAAATGCTTCTTCCA+TGG | + | chr8_1:37439936-37439955 | None:intergenic | 40.0% | |
TGTGGTTAGAAATGAAGGGT+TGG | - | chr8_1:37440300-37440319 | Msa1192130:intron | 40.0% | |
AGAAATGAAGGGTTGGATCT+AGG | - | chr8_1:37440307-37440326 | Msa1192130:intron | 40.0% | |
AGCTTGTGGTTGTTGTGATT+AGG | - | chr8_1:37440347-37440366 | Msa1192130:intron | 40.0% | |
!!! | GATTTTGATTGTAGGTGGTG+AGG | - | chr8_1:37440823-37440842 | Msa1192130:intron | 40.0% |
! | GACTGATGAGGGATTTTAAG+AGG | - | chr8_1:37440868-37440887 | Msa1192130:intron | 40.0% |
TGCTGTGATATTTGGGTATG+TGG | - | chr8_1:37440956-37440975 | Msa1192130:intron | 40.0% | |
CATTCAACTGCACACACATA+AGG | + | chr8_1:37441008-37441027 | None:intergenic | 40.0% | |
!! | CAATACTGGAAGTGTCTATC+GGG | - | chr8_1:37442053-37442072 | Msa1192130:intron | 40.0% |
TATGTGTGTCACACAGTAGT+TGG | - | chr8_1:37442140-37442159 | Msa1192130:intron | 40.0% | |
TTGTTTGTACATTGAGTGCC+TGG | - | chr8_1:37442475-37442494 | Msa1192130:intron | 40.0% | |
TGTTTGTACATTGAGTGCCT+GGG | - | chr8_1:37442476-37442495 | Msa1192130:intron | 40.0% | |
! | TTGAAACAGACTTCCCGTTT+TGG | + | chr8_1:37442574-37442593 | None:intergenic | 40.0% |
!! | TTTTCCGTGTTGTCAAGTTG+TGG | - | chr8_1:37442805-37442824 | Msa1192130:intron | 40.0% |
! | CTAAGATAGCATCGCAGTTT+TGG | + | chr8_1:37442865-37442884 | None:intergenic | 40.0% |
GGCAGAATTGCAGAAAATAG+CGG | + | chr8_1:37443252-37443271 | None:intergenic | 40.0% | |
TCATACACGTTTACGACTCT+AGG | - | chr8_1:37443497-37443516 | Msa1192130:intron | 40.0% | |
AGACGTTTCTGTGTAAACTC+GGG | - | chr8_1:37443548-37443567 | Msa1192130:intron | 40.0% | |
ATGAATCCAATAGGCCAACT+TGG | - | chr8_1:37443715-37443734 | Msa1192130:intron | 40.0% | |
GAGTTTCGGTTCATCATAGT+TGG | + | chr8_1:37443750-37443769 | None:intergenic | 40.0% | |
TAGCCTATTGGATTCATTGC+TGG | - | chr8_1:37443910-37443929 | Msa1192130:intron | 40.0% | |
GTTCCAGCAATGAATCCAAT+AGG | + | chr8_1:37443916-37443935 | None:intergenic | 40.0% | |
GATTCATTGCTGGAACAGAA+GGG | - | chr8_1:37443920-37443939 | Msa1192130:intron | 40.0% | |
GGTTCATTGCAATCTTGTGA+TGG | + | chr8_1:37444052-37444071 | None:intergenic | 40.0% | |
GATCTAGGTTTCATCAGAGT+TGG | + | chr8_1:37444074-37444093 | None:intergenic | 40.0% | |
CTGAATCAAGCTCCAATGAA+GGG | - | chr8_1:37444101-37444120 | Msa1192130:intron | 40.0% | |
CAATTGAAAGATGGTAGGCT+TGG | + | chr8_1:37444130-37444149 | None:intergenic | 40.0% | |
!! | CTGTGTATTCTGGTTTAGTC+GGG | - | chr8_1:37444312-37444331 | Msa1192130:intron | 40.0% |
ATAATACCCGCAAACCAGAA+AGG | + | chr8_1:37444344-37444363 | None:intergenic | 40.0% | |
AGAAGGGTTAGATACAAGCA+AGG | + | chr8_1:37444468-37444487 | None:intergenic | 40.0% | |
! | TTTCTTTGACCCTTTTCGCT+TGG | - | chr8_1:37444911-37444930 | Msa1192130:intron | 40.0% |
CTGAAATTGCCAAGCGAAAA+GGG | + | chr8_1:37444923-37444942 | None:intergenic | 40.0% | |
ACTGAAATTGCCAAGCGAAA+AGG | + | chr8_1:37444924-37444943 | None:intergenic | 40.0% | |
! | TGCAGATGGAAGTATATGCT+TGG | - | chr8_1:37444947-37444966 | Msa1192130:intron | 40.0% |
TGCAATACTTACCTCAATCC+AGG | - | chr8_1:37445010-37445029 | Msa1192130:intron | 40.0% | |
!!! | AAACTGCCATTTTTCTCCCT+AGG | - | chr8_1:37445169-37445188 | Msa1192130:intron | 40.0% |
ATACCACCTAGGGAGAAAAA+TGG | + | chr8_1:37445178-37445197 | None:intergenic | 40.0% | |
! | GGTCTGTTTGGTTCAAATAG+GGG | - | chr8_1:37445295-37445314 | Msa1192130:CDS | 40.0% |
! | GTCTGTTTGGTTCAAATAGG+GGG | - | chr8_1:37445296-37445315 | Msa1192130:CDS | 40.0% |
GCAACCTTTCCGTTAAAATC+AGG | + | chr8_1:37445371-37445390 | None:intergenic | 40.0% | |
!! | GGTTTTGATCGGACAAAAGA+AGG | + | chr8_1:37445468-37445487 | None:intergenic | 40.0% |
CAAAACCTTCCTTATAGTGG+AGG | - | chr8_1:37445481-37445500 | Msa1192130:intron | 40.0% | |
! | AAACCTTCCTTATAGTGGAG+GGG | - | chr8_1:37445483-37445502 | Msa1192130:intron | 40.0% |
! | AATCCATCCCGACTCAATTT+TGG | + | chr8_1:37445511-37445530 | None:intergenic | 40.0% |
GGTATATAGTGTTCGATTGG+GGG | + | chr8_1:37445596-37445615 | None:intergenic | 40.0% | |
GCACAAACAAGTGTTCCTAA+GGG | - | chr8_1:37445637-37445656 | Msa1192130:intron | 40.0% | |
CACAAACAAGTGTTCCTAAG+GGG | - | chr8_1:37445638-37445657 | Msa1192130:intron | 40.0% | |
ACATGTAGATGACGACCTAA+TGG | + | chr8_1:37445702-37445721 | None:intergenic | 40.0% | |
AGCAGAAATGTGCACAACAT+GGG | + | chr8_1:37446272-37446291 | None:intergenic | 40.0% | |
AAGCAGAAATGTGCACAACA+TGG | + | chr8_1:37446273-37446292 | None:intergenic | 40.0% | |
! | TCTATGGTTGGCCAATTCTA+TGG | - | chr8_1:37446374-37446393 | Msa1192130:five_prime_UTR | 40.0% |
! | CTTTCATTAGCCTATCGCCA+TGG | - | chr8_1:37439916-37439935 | Msa1192130:three_prime_UTR | 45.0% |
AATGCTTCTTCCATGGCGAT+AGG | + | chr8_1:37439929-37439948 | None:intergenic | 45.0% | |
GAAGAGAGAGAAAGAGAGAG+AGG | + | chr8_1:37440110-37440129 | None:intergenic | 45.0% | |
TGCAAGGAAGAGACTGATGA+GGG | - | chr8_1:37440857-37440876 | Msa1192130:intron | 45.0% | |
CTGTGATTGTGTTGCGGTTT+CGG | - | chr8_1:37441046-37441065 | Msa1192130:intron | 45.0% | |
TTGTCACGTGGCCTATATTG+CGG | - | chr8_1:37441120-37441139 | Msa1192130:intron | 45.0% | |
GAAAACACACACACACACAC+AGG | + | chr8_1:37441216-37441235 | None:intergenic | 45.0% | |
! | GCTTTTCGTTGTGCTTTTCC+AGG | - | chr8_1:37441294-37441313 | Msa1192130:CDS | 45.0% |
TGATTGTACCTCCATCCCAA+GGG | + | chr8_1:37441331-37441350 | None:intergenic | 45.0% | |
ATGATTGTACCTCCATCCCA+AGG | + | chr8_1:37441332-37441351 | None:intergenic | 45.0% | |
GCGGCTTAATGATGAAGACT+TGG | - | chr8_1:37441429-37441448 | Msa1192130:intron | 45.0% | |
CATCCTATCCTACTCGATGT+GGG | + | chr8_1:37441474-37441493 | None:intergenic | 45.0% | |
! | TGCTCGTTGGAGTATTTACG+TGG | - | chr8_1:37441492-37441511 | Msa1192130:intron | 45.0% |
! | GTTGGAGTATTTACGTGGCT+TGG | - | chr8_1:37441497-37441516 | Msa1192130:intron | 45.0% |
!! | TATGTTGTTGGTAGCAGGGT+GGG | - | chr8_1:37441862-37441881 | Msa1192130:intron | 45.0% |
TCAAAAACTGACCCGTGTCA+TGG | - | chr8_1:37442239-37442258 | Msa1192130:intron | 45.0% | |
CGCACAGTAGGTGGTTTATT+AGG | + | chr8_1:37442370-37442389 | None:intergenic | 45.0% | |
!! | CTACTGTGCGCTTTGTTTCT+CGG | - | chr8_1:37442380-37442399 | Msa1192130:intron | 45.0% |
TTTAATGCACCACAATGCCC+AGG | + | chr8_1:37442496-37442515 | None:intergenic | 45.0% | |
CGGCTACTATTGCCCTAATA+GGG | + | chr8_1:37442891-37442910 | None:intergenic | 45.0% | |
TCGGCTACTATTGCCCTAAT+AGG | + | chr8_1:37442892-37442911 | None:intergenic | 45.0% | |
! | AAAAAGCAGAAGGCACATGG+CGG | + | chr8_1:37443182-37443201 | None:intergenic | 45.0% |
! | GTATTTTGTACACGGCATCC+TGG | - | chr8_1:37443357-37443376 | Msa1192130:intron | 45.0% |
! | CATTCACCAAGTTGGCCTAT+TGG | + | chr8_1:37443724-37443743 | None:intergenic | 45.0% |
GTTGGGTTCATTCACCAAGT+TGG | + | chr8_1:37443732-37443751 | None:intergenic | 45.0% | |
AGTGGGATCGAGTTCTCATT+GGG | + | chr8_1:37443795-37443814 | None:intergenic | 45.0% | |
TAGTGGGATCGAGTTCTCAT+TGG | + | chr8_1:37443796-37443815 | None:intergenic | 45.0% | |
GGATTCATTGCTGGAACAGA+AGG | - | chr8_1:37443919-37443938 | Msa1192130:intron | 45.0% | |
TTGTTTATGCTGGGAGCTAC+AGG | + | chr8_1:37444004-37444023 | None:intergenic | 45.0% | |
!! | CAATCTTGTGATGGGCTCAT+TGG | + | chr8_1:37444043-37444062 | None:intergenic | 45.0% |
TGATTCAGCTCAGCAGATCT+AGG | + | chr8_1:37444089-37444108 | None:intergenic | 45.0% | |
GCTGAATCAAGCTCCAATGA+AGG | - | chr8_1:37444100-37444119 | Msa1192130:intron | 45.0% | |
TAGGCTTGGATTCCCTTCAT+TGG | + | chr8_1:37444116-37444135 | None:intergenic | 45.0% | |
TTCTCGCACAACTGTCAAGA+TGG | + | chr8_1:37444571-37444590 | None:intergenic | 45.0% | |
! | TGTTTGGTTCAAATAGGGGG+TGG | - | chr8_1:37445299-37445318 | Msa1192130:CDS | 45.0% |
! | GTTTGGTTCAAATAGGGGGT+GGG | - | chr8_1:37445300-37445319 | Msa1192130:CDS | 45.0% |
GGCACAAACAAGTGTTCCTA+AGG | - | chr8_1:37445636-37445655 | Msa1192130:intron | 45.0% | |
AAGCATTACTTCCACTGTGG+TGG | + | chr8_1:37445673-37445692 | None:intergenic | 45.0% | |
! | TTTGCTGGTGAGTTTGGGTT+TGG | + | chr8_1:37446006-37446025 | None:intergenic | 45.0% |
!! | CAGAGTTTGCTGGTGAGTTT+GGG | + | chr8_1:37446011-37446030 | None:intergenic | 45.0% |
!! | TCAGAGTTTGCTGGTGAGTT+TGG | + | chr8_1:37446012-37446031 | None:intergenic | 45.0% |
GTGAGATTGTTGAGCAGAGT+TGG | - | chr8_1:37446082-37446101 | Msa1192130:intron | 45.0% | |
AGCAAACACACAGTCAAGCA+AGG | + | chr8_1:37446222-37446241 | None:intergenic | 45.0% | |
CAGAAATGTGCACAACATGG+GGG | + | chr8_1:37446270-37446289 | None:intergenic | 45.0% | |
GCAGAAATGTGCACAACATG+GGG | + | chr8_1:37446271-37446290 | None:intergenic | 45.0% | |
TGGTTGACCAAGTCTATGGT+TGG | - | chr8_1:37446362-37446381 | Msa1192130:five_prime_UTR | 45.0% | |
GAATTGGCCAACCATAGACT+TGG | + | chr8_1:37446372-37446391 | None:intergenic | 45.0% | |
TTGGCCAATTCTATGGTGCA+AGG | - | chr8_1:37446381-37446400 | Msa1192130:five_prime_UTR | 45.0% | |
!!! | ACTTATTTATTTATTTATTT+TGG | - | chr8_1:37440411-37440430 | Msa1192130:intron | 5.0% |
! | TCTGACTTGCGAGTGGAGAA+GGG | + | chr8_1:37440086-37440105 | None:intergenic | 50.0% |
! | TTCTGACTTGCGAGTGGAGA+AGG | + | chr8_1:37440087-37440106 | None:intergenic | 50.0% |
CTCATCAGTCTCTTCCTTGC+AGG | + | chr8_1:37440858-37440877 | None:intergenic | 50.0% | |
CTGCAAGGAAGAGACTGATG+AGG | - | chr8_1:37440856-37440875 | Msa1192130:intron | 50.0% | |
TTGTGACGTGGCCTAGATTG+AGG | - | chr8_1:37441083-37441102 | Msa1192130:intron | 50.0% | |
CTATATTGCGGTCGCGGTTT+CGG | - | chr8_1:37441132-37441151 | Msa1192130:intron | 50.0% | |
! | TTGTGACGTGGCCTTGATTG+CGG | - | chr8_1:37441169-37441188 | Msa1192130:intron | 50.0% |
GATTGTACCTCCATCCCAAG+GGG | + | chr8_1:37441330-37441349 | None:intergenic | 50.0% | |
TCCTACTCGATGTGGGACTT+GGG | + | chr8_1:37441467-37441486 | None:intergenic | 50.0% | |
ATCCTACTCGATGTGGGACT+TGG | + | chr8_1:37441468-37441487 | None:intergenic | 50.0% | |
AGTCCCACATCGAGTAGGAT+AGG | - | chr8_1:37441468-37441487 | Msa1192130:intron | 50.0% | |
GCATCCTATCCTACTCGATG+TGG | + | chr8_1:37441475-37441494 | None:intergenic | 50.0% | |
GAGTAGGATAGGATGCTCGT+TGG | - | chr8_1:37441479-37441498 | Msa1192130:intron | 50.0% | |
!! | GTATGTTGTTGGTAGCAGGG+TGG | - | chr8_1:37441861-37441880 | Msa1192130:intron | 50.0% |
GTTGACGCTTCAGTTCACAG+AGG | - | chr8_1:37442339-37442358 | Msa1192130:intron | 50.0% | |
GAAACAAAGCGCACAGTAGG+TGG | + | chr8_1:37442379-37442398 | None:intergenic | 50.0% | |
CGAGAAACAAAGCGCACAGT+AGG | + | chr8_1:37442382-37442401 | None:intergenic | 50.0% | |
AGCGCCACAACTTGACAACA+CGG | + | chr8_1:37442812-37442831 | None:intergenic | 50.0% | |
GTTGTGGCGCTATAGCACAT+TGG | - | chr8_1:37442821-37442840 | Msa1192130:intron | 50.0% | |
AGGATGTTTAGCACACGTGC+AGG | + | chr8_1:37443002-37443021 | None:intergenic | 50.0% | |
! | GGCAAAAAGCAGAAGGCACA+TGG | + | chr8_1:37443185-37443204 | None:intergenic | 50.0% |
TGTTGCGGGCAAAAAGCAGA+AGG | + | chr8_1:37443192-37443211 | None:intergenic | 50.0% | |
!! | GTATTTTGGACACGGCATCC+TGG | - | chr8_1:37443303-37443322 | Msa1192130:intron | 50.0% |
TTTATGCTGGGAGCTACAGG+CGG | + | chr8_1:37444001-37444020 | None:intergenic | 50.0% | |
!! | GACCAGTCCTTTCTGGTTTG+CGG | - | chr8_1:37444334-37444353 | Msa1192130:intron | 50.0% |
!! | ACCAGTCCTTTCTGGTTTGC+GGG | - | chr8_1:37444335-37444354 | Msa1192130:intron | 50.0% |
!!! | CTGCCATTTTTCTCCCTAGG+TGG | - | chr8_1:37445172-37445191 | Msa1192130:intron | 50.0% |
GGGCAGGGATTTCAATGGAA+AGG | - | chr8_1:37445320-37445339 | Msa1192130:CDS | 50.0% | |
! | TTTGGCTCCCCTCCACTATA+AGG | + | chr8_1:37445493-37445512 | None:intergenic | 50.0% |
GAGGGGAGCCAAAATTGAGT+CGG | - | chr8_1:37445500-37445519 | Msa1192130:intron | 50.0% | |
AGGGGAGCCAAAATTGAGTC+GGG | - | chr8_1:37445501-37445520 | Msa1192130:intron | 50.0% | |
GAGCCAAAATTGAGTCGGGA+TGG | - | chr8_1:37445505-37445524 | Msa1192130:intron | 50.0% | |
ACAAGTGTTCCTAAGGGGCA+AGG | - | chr8_1:37445643-37445662 | Msa1192130:intron | 50.0% | |
!! | CAGCAAACTCTGAAGCTGCT+CGG | - | chr8_1:37446019-37446038 | Msa1192130:intron | 50.0% |
GGCACCTTGCACCATAGAAT+TGG | + | chr8_1:37446388-37446407 | None:intergenic | 50.0% | |
! | GAGAGGTTCTGACTTGCGAG+TGG | + | chr8_1:37440093-37440112 | None:intergenic | 55.0% |
!! | TGAGGATGTCGACTCCTGCA+AGG | - | chr8_1:37440841-37440860 | Msa1192130:intron | 55.0% |
TTGCAACAAGATCCCCCTGC+TGG | - | chr8_1:37440891-37440910 | Msa1192130:intron | 55.0% | |
CGAAACCGCGACCGCAATAT+AGG | + | chr8_1:37441134-37441153 | None:intergenic | 55.0% | |
AACATCCGCGACCGCAATCA+AGG | + | chr8_1:37441183-37441202 | None:intergenic | 55.0% | |
! | CATTGAGTGCCTGGGCATTG+TGG | - | chr8_1:37442484-37442503 | Msa1192130:intron | 55.0% |
CCTCTGAGCTATGGGAGTTG+AGG | + | chr8_1:37443640-37443659 | None:intergenic | 55.0% | |
CCTCAACTCCCATAGCTCAG+AGG | - | chr8_1:37443637-37443656 | Msa1192130:intron | 55.0% | |
TAGTCGGGACCAGTCCTTTC+TGG | - | chr8_1:37444327-37444346 | Msa1192130:intron | 55.0% | |
ACCCGCAAACCAGAAAGGAC+TGG | + | chr8_1:37444339-37444358 | None:intergenic | 55.0% | |
GTTCAAATAGGGGGTGGGCA+GGG | - | chr8_1:37445305-37445324 | Msa1192130:CDS | 55.0% | |
GCTCCCCTCCACTATAAGGA+AGG | + | chr8_1:37445489-37445508 | None:intergenic | 55.0% | |
GGTGGAAATCCTTGCCCCTT+AGG | + | chr8_1:37445655-37445674 | None:intergenic | 55.0% | |
GGCAAGGATTTCCACCACAG+TGG | - | chr8_1:37445659-37445678 | Msa1192130:intron | 55.0% | |
CGAGCAGCTTCAGAGTTTGC+TGG | + | chr8_1:37446021-37446040 | None:intergenic | 55.0% | |
CGAGTGGAGAAGGGTGAGAG+AGG | + | chr8_1:37440077-37440096 | None:intergenic | 60.0% | |
ATCCCCCTGCTGGCATCAGT+GGG | - | chr8_1:37440901-37440920 | Msa1192130:intron | 60.0% | |
CGTGGCCTATATTGCGGTCG+CGG | - | chr8_1:37441126-37441145 | Msa1192130:intron | 60.0% | |
CAGGCCAGATGACACCCCTT+GGG | - | chr8_1:37441313-37441332 | Msa1192130:intron | 60.0% | |
!! | CCATCCCAAGGGGTGTCATC+TGG | + | chr8_1:37441320-37441339 | None:intergenic | 60.0% |
CCAGATGACACCCCTTGGGA+TGG | - | chr8_1:37441317-37441336 | Msa1192130:intron | 60.0% | |
GATGACACCCCTTGGGATGG+AGG | - | chr8_1:37441320-37441339 | Msa1192130:intron | 60.0% | |
GCCCAAGTCCCACATCGAGT+AGG | - | chr8_1:37441463-37441482 | Msa1192130:intron | 60.0% | |
GGTTCAAATAGGGGGTGGGC+AGG | - | chr8_1:37445304-37445323 | Msa1192130:CDS | 60.0% | |
GGGGTGGGCAGGGATTTCAA+TGG | - | chr8_1:37445315-37445334 | Msa1192130:CDS | 60.0% | |
GATCCCCCTGCTGGCATCAG+TGG | - | chr8_1:37440900-37440919 | Msa1192130:intron | 65.0% | |
TCCCCCTGCTGGCATCAGTG+GGG | - | chr8_1:37440902-37440921 | Msa1192130:intron | 65.0% | |
AGCCCCACTGATGCCAGCAG+GGG | + | chr8_1:37440907-37440926 | None:intergenic | 65.0% | |
GAGCCCCACTGATGCCAGCA+GGG | + | chr8_1:37440908-37440927 | None:intergenic | 65.0% | |
! | CGTGGCCTTGATTGCGGTCG+CGG | - | chr8_1:37441175-37441194 | Msa1192130:intron | 65.0% |
!! | CCAAGGGGTGTCATCTGGCC+TGG | + | chr8_1:37441315-37441334 | None:intergenic | 65.0% |
CCAGGCCAGATGACACCCCT+TGG | - | chr8_1:37441312-37441331 | Msa1192130:intron | 65.0% | |
GCCCCACTGATGCCAGCAGG+GGG | + | chr8_1:37440906-37440925 | None:intergenic | 70.0% | |
GGAGCCCCACTGATGCCAGC+AGG | + | chr8_1:37440909-37440928 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_1 | gene | 37439844 | 37446412 | 37439844 | ID=Msa1192130;Name=Msa1192130 |
chr8_1 | mRNA | 37439844 | 37446412 | 37439844 | ID=Msa1192130-mRNA-1;Parent=Msa1192130;Name=Msa1192130-mRNA-1;_AED=0.03;_eAED=0.03;_QI=265|1|1|1|0.8|0.83|6|296|152 |
chr8_1 | exon | 37439844 | 37440268 | 37439844 | ID=Msa1192130-mRNA-1:exon:12302;Parent=Msa1192130-mRNA-1 |
chr8_1 | exon | 37441225 | 37441313 | 37441225 | ID=Msa1192130-mRNA-1:exon:12301;Parent=Msa1192130-mRNA-1 |
chr8_1 | exon | 37443838 | 37443927 | 37443838 | ID=Msa1192130-mRNA-1:exon:12300;Parent=Msa1192130-mRNA-1 |
chr8_1 | exon | 37444915 | 37444940 | 37444915 | ID=Msa1192130-mRNA-1:exon:12299;Parent=Msa1192130-mRNA-1 |
chr8_1 | exon | 37445286 | 37445419 | 37445286 | ID=Msa1192130-mRNA-1:exon:12298;Parent=Msa1192130-mRNA-1 |
chr8_1 | exon | 37446157 | 37446412 | 37446157 | ID=Msa1192130-mRNA-1:exon:12297;Parent=Msa1192130-mRNA-1 |
chr8_1 | five_prime_UTR | 37446157 | 37446412 | 37446157 | ID=Msa1192130-mRNA-1:five_prime_utr;Parent=Msa1192130-mRNA-1 |
chr8_1 | five_prime_UTR | 37445411 | 37445419 | 37445411 | ID=Msa1192130-mRNA-1:five_prime_utr;Parent=Msa1192130-mRNA-1 |
chr8_1 | CDS | 37445286 | 37445410 | 37445286 | ID=Msa1192130-mRNA-1:cds;Parent=Msa1192130-mRNA-1 |
chr8_1 | CDS | 37444915 | 37444940 | 37444915 | ID=Msa1192130-mRNA-1:cds;Parent=Msa1192130-mRNA-1 |
chr8_1 | CDS | 37443838 | 37443927 | 37443838 | ID=Msa1192130-mRNA-1:cds;Parent=Msa1192130-mRNA-1 |
chr8_1 | CDS | 37441225 | 37441313 | 37441225 | ID=Msa1192130-mRNA-1:cds;Parent=Msa1192130-mRNA-1 |
chr8_1 | CDS | 37440140 | 37440268 | 37440140 | ID=Msa1192130-mRNA-1:cds;Parent=Msa1192130-mRNA-1 |
chr8_1 | three_prime_UTR | 37439844 | 37440139 | 37439844 | ID=Msa1192130-mRNA-1:three_prime_utr;Parent=Msa1192130-mRNA-1 |
Gene Sequence |
Protein sequence |